EMLSAG00000009363, EMLSAG00000009363-692129 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009363 vs. C. finmarchicus
Match: gi|592916567|gb|GAXK01041808.1| (TSA: Calanus finmarchicus comp2068442_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 3.583e-1 Identity = 19/48 (39.58%), Postives = 29/48 (60.42%), Query Frame = 0 Query: 19 IKSSLTETPSEGKYSGFFLEMADILHSIFPSTSSLAINKFTSSSGLGQ 66 +KSSLTE ++G+ + E+ D+ S F S ++ N FTS S +GQ Sbjct: 5798 VKSSLTEEVTKGRRN---YEVNDLAASYFDSETTELDNVFTSLSTIGQ 5932
BLAST of EMLSAG00000009363 vs. C. finmarchicus
Match: gi|592800449|gb|GAXK01154119.1| (TSA: Calanus finmarchicus comp1387490_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 3.901e+0 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 0 Query: 14 ISSTFIKSSLTETPSEGKYS 33 +SS FIK+SL E P GKYS Sbjct: 200 VSSIFIKNSLKEGPDTGKYS 259
BLAST of EMLSAG00000009363 vs. C. finmarchicus
Match: gi|592856737|gb|GAXK01100807.1| (TSA: Calanus finmarchicus comp7421_c0_seq2 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 4.815e+0 Identity = 19/53 (35.85%), Postives = 24/53 (45.28%), Query Frame = 0 Query: 32 YSGFFLEMADIL---HSIFPSTSSLAINKFTSSSGLGQIMDIASPGRKSGRAP 81 YSG +M +L H P+ S GLG + D+ASP R GR P Sbjct: 3607 YSGISRQMMTLL*VSHLTLPARS-------VKRGGLGALPDLASPFRLCGRWP 3744
BLAST of EMLSAG00000009363 vs. L. salmonis peptides
Match: EMLSAP00000009363 (pep:novel supercontig:LSalAtl2s:LSalAtl2s599:281572:282228:-1 gene:EMLSAG00000009363 transcript:EMLSAT00000009363 description:"snap_masked-LSalAtl2s599-processed-gene-3.14") HSP 1 Score: 183.726 bits (465), Expect = 3.867e-61 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 Query: 1 MIKKIITFFGGFLISSTFIKSSLTETPSEGKYSGFFLEMADILHSIFPSTSSLAINKFTSSSGLGQIMDIASPGRKSGRAPRGELTELKYLIKS 94 MIKKIITFFGGFLISSTFIKSSLTETPSEGKYSGFFLEMADILHSIFPSTSSLAINKFTSSSGLGQIMDIASPGRKSGRAPRGELTELKYLIKS Sbjct: 1 MIKKIITFFGGFLISSTFIKSSLTETPSEGKYSGFFLEMADILHSIFPSTSSLAINKFTSSSGLGQIMDIASPGRKSGRAPRGELTELKYLIKS 94 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009363 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000009363 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000009363 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000009363 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009363 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000009363 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000009363 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s599:281572..282228- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009363-692129 ID=EMLSAG00000009363-692129|Name=EMLSAG00000009363|organism=Lepeophtheirus salmonis|type=gene|length=657bp|location=Sequence derived from alignment at LSalAtl2s599:281572..282228- (Lepeophtheirus salmonis)back to top Add to Basket
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