EMLSAT00000006465, EMLSAT00000006465-702312 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006465
Unique NameEMLSAT00000006465-702312
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: female reproduction
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
K F81 Etif_g1565 female
  1. Adult
  2. Adult
-Missing-
female reproduction
03.04.2013 - 10:46
13.05.2013 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s353supercontigLSalAtl2s353:325573..330949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006465 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006465EMLSAG00000006465-689231Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028238EMLSAE00000028238-737166Lepeophtheirus salmonisexon
EMLSAE00000028239EMLSAE00000028239-737167Lepeophtheirus salmonisexon
EMLSAE00000028240EMLSAE00000028240-737168Lepeophtheirus salmonisexon
EMLSAE00000028241EMLSAE00000028241-737169Lepeophtheirus salmonisexon
EMLSAE00000028242EMLSAE00000028242-737170Lepeophtheirus salmonisexon
EMLSAE00000028243EMLSAE00000028243-737171Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776460auto776460Lepeophtheirus salmonispolypeptide
EMLSAP00000006465EMLSAP00000006465Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006465

>EMLSAP00000006465 ID=EMLSAP00000006465|Name=EMLSAP00000006465|organism=Lepeophtheirus salmonis|type=polypeptide|length=248bp
MSGGNSSNSGAGNKYYQQSLSRASSTGSLHAGVDNATDXEDSDSKSNLSY
RERRREAHTQAEQKRRDAIKKGYDFLQDLVPTCPTAQESVGGGTGSSSGG
GYKVSKAIVLQKSIEYIQHVQGQKKVQEDELASLRKEVVALQIMRKNYEA
LAKAHKSQPSSSSLFLKDTALLPGEVKFQVFQLLMDSLFQSFNDSVNMKN
FSELSGCVFSWLZEQXKPQLLQELXQQLLCRVHEEHQIKKDEKKLYDN
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mRNA from alignment at LSalAtl2s353:325573..330949+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006465-702312 ID=EMLSAT00000006465-702312|Name=EMLSAT00000006465|organism=Lepeophtheirus salmonis|type=mRNA|length=5377bp|location=Sequence derived from alignment at LSalAtl2s353:325573..330949+ (Lepeophtheirus salmonis)
CAACTTACATAAACATTCTTTTTGAATTTTAAGTCTTTATTTCTTATCAA GAGAATTAAAGAATCCATAGCCTAATGGTATGTCTGTATTTTCAATTTTC TATAATTAAATTAAAAATGGTCATTTTGAAAAAATCAAATTTATAATTTG CAAAGTAATGAAGGTCCAAATGTAAAATGATGATGTCCTACTTATTTGAT TGGTTAAGGATATCATCCAGTTAGGATTAAAGAAGTACTTAAAAAACTAG GATCCTTAAAAGAAATTCGCCATTTTATTGTGACAGGGATTGAGTGAGAA GAAGGAGGTGGTGATCTAAAGCAAAGGTAAGTCCTTAAGACTCTTCTTCT TTGTTGATATAGAATCTCAGTATCTGAATGGGTGTTTTGTGTTTCTCTCT CCCGAAATCATAGAACTCGTTCTACAGGTTTTTTGTTGTATACTTGAATA TTATAAATTAAAACTAAGATGAAGTTGTCGGCGTTTGAGTGAATTGGAGA GAGAGTTTCTTATGCTGTTGCTTCCTACTTGCTCTCCCTCGTCTCTCTCA TGTCTCTCCCATCTCCACATTTGAAATTACAATTAGTTCTTTGTTCCTTA GTGGGTCGAGAGAATGAAGCTGGAGTATTCGAGGGGAGTAATGAGGAAAG GATCTGCTCAAGCAGCCATGAGTTGGATGTCGAACGAAGGTGAAGGGCTC TTTGAGGAGGAAAGCTGTTCCTGGGACTGTTCGCATGTATTAGCAGAGTC TCCTTTTCCACTGCTTTGCTTAGCGCAGGCTTTAGGTAGAGTTGATTGTT GTCCGTCTCATTGACTTTTGTCGTCATTTGATGTGTTGATTTTATAGAGA GGAATGCGGCGTTTTTCCAGTCCTTGTGCGAGTTGGATAATCGAAGATTA GATGTGGATGGACTGATTGAATGGATTTATGAGTGTGCACTCCGTATGGG AGATGAATGGACTTTTCAAGGCCCTGTGGTAATGATGGGAGATGTGTTTT TTAACCGTAGCATTGAAGCCTTGGCTGCCGGGCACCCTGTTATCTTTTTA ACACACAAAAAGGATTCTCTTGCTGCCTTTTTTAAAAAGTTGACGAATGA AGCAAAATTTAAAAAGGGCTCGTTTGAAATCCCTCTCTGGGAGGGGGGCT CTTTATCCACTCTCCCAGACTATTTAAAGGGAGTACCCATTTTGTATGAA TGGGACTCTTTTTACTCTCCGAGTGACGAGGTGAAATGGCTCSTCMGCTC MAGKGGRTCATTTTTKCCATCCMTTCGAAAGGGKATGATTTCTCTCTAGT ACCATTCAAGAGTCTCCACATTCTTGCTTTTATATATTTATAGGTGGGAG TCCTGCTATAATTCTGGACTCTGCTGATTTGGATTCAGTAATTGAGTCTA TTATTACTTCCATTAAGAGCTACAACGGGTATTCGGTTTTTAGAATTCCA CGCTTGTTTATCCAAGAGTCTATTTTCCASATATTTCTTGAAAAAATGAA TGGAAGAATGAAAAAATTTGTAATTGGAAGTCATAATAGCGAACTTGGAG TAGATGGCATTATCACCAAAGAAACTATACGAAATCTTTCTGAATTACTC AAAACTGAAGGTGTTGAAGCGTATTCATCCAAAGATATTGCTCCACTCAT TCTCACTTCATTTCCAACTAACATTGATCCTAATGTTGGTCTTATCTTCA TGGCAACTCCATTTAGAACGTCTAAAGAGTTATTGTCTCTTTTTATGAGT TATTATGGAGAAGAAGCCTTCGTCTTCTCTGAAAACTTTTCACAGAGCAT GGAAATCGTTCATAAACTTGACTTTGAGACTGTCCACATTAATAACGTAG ACGAGTCCTTTATATATCGTATGAAAGGTAGAATTCCTAAACAGCTTCAG AGGAATGATCATTTTAATAAACAAGATATTGATAATCATTTTCAACAAGT CATTCCATATTCTGTCGATAAGTCATACATTTGTGCACTTAAGGCTAGTG GTGCTTGGTTCAAGACTAAAAGAGTCCGCTATATTTACAATGCCCTTAAT TTCTGTAATATGTATTCTAACGAGCTCGCTAAATGGGTTATGCCTGACAA TTTAGACTGCGGATCAGGCAGAGGAGATAAACATATTTTGGATATAAAGG ATCCAGCTGGAGTTGTAGGCTTCATTTTAGAAGATGGAGAATGTTTGTCT AAGTGGATGCCACTTATTGTTTGTGCTTTGTCCTGTGGAAATGTCATCTT GTTGACTCTTAGATCTAAAAATGAGACTCTGTCTAATTTCTCTGAGAAAT TGGGCGAAGGAGTTCTCAGTATAATTATAAATGAAGATGTAGAGTCAGTT GCGTCGGGTTTCATTCAAAGGAGGGRTTTGGGACTTATTGTTTATACTGG KGTGTCTAAAAAAGTTTCTCTTTATTTACGTTATAAAGCAAATTGTGGAG TTTGGAATCCAAGGAATAACGACTTCTCTAGGAGTGAAGCTCATCAATGG TTCAATAAGACTAAGAAAATCAACATGTCTTTCGAAACTATTTATGCTAA TTAGTTTTTGTTCCGTATAGTCCAGTAATAAAGATTAAATAATTATGATT ATATACTGGTTTTATTTATTCCAAACTAATGTAGTTTCTCATTTTTAAAG AAGTCTATCTAAAATTTGATTGAGCTATAATATCTTTCTAATCTATGTAC TTATGCATCATTCGTAGTATATATTTATGAATAATAATGAATCATTTATA GGTAAATATTGAATAAAGTTTATCTTCAGAAAAAGATGAAAACAAGTCGA AAGCAATACGAAACTCGTAGTCGAAAATATTCGGCTGAAAGCACCTCACC TTATTCTAGTGCCTCCGTATCTCCCGCTGATAGTCCTACCGACTTTGAAA TCAAGCATCCGTTAGAACATGAATGGACTCTTTGGTATTATAATCATGAT CCACAAAATGCATGGGAAGACAATCTCAAAGAGGTTAAATTTTTATTTTA TTTTGAAAAATTAGTTCCTGAGTAAATAATTATGAGACAAACAACAATAC TGATGTAGGTATATAATTTTATACCTACGTCTACTTATGAAAGATTACTT AACTACTTAAAATAGGTTAAGTATTACATTATAGAAGTTATACGACTACT CTATTTACTTTTTTTTACCTAAAACTTTATTTTATTTTACTATAGGTAAT TTCATTCAATACTGTGGAAGATTTTTGGGCCATATATAATCATATCGAGT TAGCCTCCGAGATAAGTGATAAATGTGACTATTGTCTCTTTAAAAAGGGA GTAAAACCCATGTGGGAAGACGCTTCTAATTGTAATGGAGGACGCTGGGT TTATAGTACTCCTGTAAATAGAAGAAAATCATTTGACGGAGGTTAGTAGA TACTGATAGTCGTTTAATTTGATTTTACGTTCAGTTGGTTTGTTAATCAA TATCTTGTACTCAGGACTAGATGTGAATTGGCTAGAAGTGATGATGTCTT TAATAGGTGAAGCTTTTGAAGGGKCTGGTGATTTGATTAATGGTGCTGTT GTTAGTCTTCGTAATAAATCAGATAAAATATCAATTTGGTTGGGTACAGC GTATGACGAGGATGACGGCATCCGAAGAATTGGAGCGATTCTCAAGAAAA GACTTGGGCTTAGAAGAGACGAACAACTTTCATTTGAAGTTCATCGTGAT AATCAAAANCGCATTAACTCCACCGCTATTCGTCCTAAGTATCAAGTGTA GTCATAGTCTATTTATTTTAATTTTATTTAATACCTAGAAACATAACTGC ATATAATTTCTTTTCCCAACAACGTTATTTATCATAAATTAATGTGTGCA GATTTATTGTTCAAACATTATTTATATATCATATAAAGAACAAAAAATAA AATTGTTGAGTTATCTATGTTGAAGCATAAATATATATAATGGCTGKTAT GAAAAATTTCAATGCATTTGTCTTTTTCCCTGCTCTTATGTGTTTCTCAT CACTTTTTGTATTTTTAACTTAAAAAAGTATGTATTACATCGATATATTT CCCATTATTGAGTTAGGGCACGTAGAGAGGGAGAAATAATATTATTGCAA TCTTTTAAAACAGTATTACTTCGTTATCACTTATAATTATATAGCTAATC GAACACGCATACATTATTAGCTAGACACTTTATTACTATGTATTATTTCA ATAACACCATCAAGCTGTTGATACGTACGTATACATTTGGACTTTATCTA CATAAACAAGCTATGCATAGTTTTTCTTTTAACCGTACGCGTTGGAAAAT AATGTCTGTTCATATAATCTGATAGTAAGACAGTATAGACATCATACATA CACCTTGTTTATTTCGTTCTCCTTAAGGGGACGCAAATAATGATCATAGC GTAATATTAATATCTATAACCATCAAGATCATCCATATCCTAGTCTATAT AGTGTAATACGGAATAGCCAGATAAATTTATACACAATAAAAAAACAATG TCTGGAGGAAATAGTTCAAATAGTGGAGCAGGGAACAAATATTATCAGCA GTCACTCTCTAGAGCGAGTTCGACAGGATCTCTACACGCTGGAGTTGACA ATGCTACGGATGRCGAAGACTCTGACTCCAAGTCCAATTTGTCATATCGA GAAAGAAGAAGAGAGGCACATACTCAGGCTGAACAGAAGAGAAGAGACGC AATTAAAAAAGGATACGACTTTTTGCAGGACCTAGTACCTACATGTCCAA CTGCACAGGAATCTGTTGGTGGTGGAACAGGTTCAAGTAGTGGGGGAGGG TGAGTTGTATCATATTTTCAACTTTAATTCATTTCTGCTTCTATCAAATT ATAGATTATAATATTATTAATAATTATCTTACGTCTTTTGTATTATTATA TTTTAAGATCAATATTTGTATTATTTTTTAAGATATAAAGTTAGCAAAGC AATTGTACTGCAAAAGTCCATTGAATACATTCAACATGTTCAAGGCCAAA AAAAAGTACAAGAAGATGAATTGGCATCACTGAGAAAGGAAGTGGTAGCT CTGCAAATCATGAGGAAAAATTATGAAGCTTTAGCAAAGGCTCATAAATC CCAGCCTTCATCCTCATCCCTGTTTCTCAAGGACACAGCCCTTCTTCCTG GGGAAGTAAAATTTCAAGTCTTTCAGCTTCTAATGGACTCCTTGTTTCAA TCATTTAACGACAGTGTCAATATGAAAAACTTTTCAGAGTTATCTGGTTG TGTGTTTTCATGGCTCSAGGAACAAWGTAAGCCTCAGTTACTTCAAGAAC TTATKCAGCAATTATTGTGTAGAGTGCATGAAGAACATCAAATCAAAAAG GACGAAAAAAAACTTTACGATAATTAG
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