daf-12 c1, snap_masked-scaffold497_size155254-processed-gene-0.9 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000012453 (supercontig:LSalAtl2s:LSalAtl2s915:34803:37041:1 gene:EMLSAG00000012453 transcript:EMLSAT00000012453 description:"maker-LSalAtl2s915-augustus-gene-0.20") HSP 1 Score: 117.472 bits (293), Expect = 2.941e-27 Identity = 66/238 (27.73%), Postives = 121/238 (50.84%), Query Frame = 0 Query: 203 WTTFVDVFDNNFWITVGLAFVMSTLALYILFLFVQR--ETTIGFNTSLAISFLALLALSVPTYPRQVPGRILFLSVLVMGSLVFWSYNAGLVSLLTIEVVNLPIKSLEDLVQKTDYQLMVESATSYEDYFKTATKEINPTAA----TLWEQSLKNNPQALLKSISDVEEKLLANDKLIYFGSELPTILTTASYPCHIVASDKSYFTVSIAWAFQNQSQFLPLFNHMLNSLKQTGHLDR 434 W + + VFD FWI++ ++ TL ++ + +QR E I F + L + F L P + R+L L++ + G+L+ W +N L+S+ T +LP++SL DLV +DY+L++ + T+ D+F E +P+ ++++ ++ N + + + E L N K +Y G E + T YPC + AS + + W ++ ++ F + L LK+TG +DR Sbjct: 314 WYSILHVFDWQFWISILCLSLVFTLVVFFIRRAIQRTSEIPIVFPSFLMVFFTLLGQEPSPCINKITSLRLLILNISLFGALISWIFNGSLISVFTSVKSSLPVQSLNDLVTHSDYRLIIANGTAVTDWFTNTENETDPSVLDRYRMVYQKIIEGNEEKVFFPFDKIPEILATNKKYVYLGEEFTMLTQTKDYPCRLQASXLDLGRLDLGWIYKRNFEYREFFEYQLKKLKETGMIDR 551
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 72.4034 bits (176), Expect = 3.464e-13 Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 0 Query: 480 NSNSLLEPSNDSLSG----SEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRNYDN----MWKRAK 603 N+NS S D G S++ + ++C +C +H YG TC SC+ FF+R VQ+ K C +C I + R +C CRF+ C+ GM +EAV +HDR R N M+KR + Sbjct: 154 NNNSAGSTSGDFGPGVVGQSDQPDSKDGMEELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNKKV--YTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAV-----RHDRMRGGRNKFGPMYKRDR 276
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13") HSP 1 Score: 71.633 bits (174), Expect = 6.307e-13 Identity = 31/81 (38.27%), Postives = 45/81 (55.56%), Query Frame = 0 Query: 508 CAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 CA+C + H YGA +C C+ FFRR V+ + C+++ C ++ R CR CR K CI+AGM AV NE ++ Sbjct: 151 CAVCGDRATGKH--YGAASCDGCKGFFRRSVRKERV--YGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNERDR 227
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 68.9366 bits (167), Expect = 4.171e-12 Identity = 37/103 (35.92%), Postives = 52/103 (50.49%), Query Frame = 0 Query: 480 NSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAV 582 NS+SL PS S GT+ +C +C S H YG TC C++FF+R V+ T C+ +C + +R +C+ CRFK C+ GM EAV Sbjct: 54 NSSSLTAPSPSS-------GTNSSTEILCVVCGDKSSGKH--YGQFTCEGCKSFFKRCVRRSLT--FQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAV 145
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 68.5514 bits (166), Expect = 4.899e-12 Identity = 43/129 (33.33%), Postives = 64/129 (49.61%), Query Frame = 0 Query: 464 DGFKVSNVAMYVNQGVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLAC-KRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDR 591 D F +SN +NS +L EPS+ + E ++C IC H+ YG C SCRAFFRR VQ+ + +C +++ C I+ R C+ CRF+ CI AGM V+ + E+ + Sbjct: 69 DSF-LSNADQVNFNELNSATLSEPSSQIIIRREA------LPRLCQIC-GEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSK 189
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 68.1662 bits (165), Expect = 8.210e-12 Identity = 38/102 (37.25%), Postives = 50/102 (49.02%), Query Frame = 0 Query: 496 EEGGTSGRR----SKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKR-----SDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 EE RR + +C IC + H +YGA C SCRAFF R V G +R C R S C I+ + RT C+ CR++ C+ AGM V E+ Sbjct: 121 EEPKKRKRRPEPMTDVCRIC-GDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEER 221
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 67.3958 bits (163), Expect = 1.097e-11 Identity = 36/109 (33.03%), Postives = 57/109 (52.29%), Query Frame = 0 Query: 486 EPSNDSLSGSEEGGTSGRRS--KICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDR-LACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDR 591 E ++ +LS GR++ ++C IC H+ YG C SCRAFFRR VQ+ + + C ++ C I+ R C+ CRF+ C+ AGM + V + E+ + Sbjct: 83 ELNSTTLSEDSSQIIIGRQALPRLCQIC-GEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSK 190
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 67.0106 bits (162), Expect = 1.531e-11 Identity = 34/80 (42.50%), Postives = 43/80 (53.75%), Query Frame = 0 Query: 504 RSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVM 583 R C IC +++ + H++YGA C SCRAFFRR V C R TC I+ R C+ CRF C+ AGM VM Sbjct: 59 RKVTCHIC-SDTANDHIHYGAIACXSCRAFFRRAVICNA--EYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVM 135
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4") HSP 1 Score: 63.5438 bits (153), Expect = 1.726e-11 Identity = 27/76 (35.53%), Postives = 44/76 (57.89%), Query Frame = 0 Query: 504 RSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLA-CKRSDTCNISYSNRTKCRKCRFKACIRAGMN 578 R++IC +C + +H +GA TC C++FF R + ++ CK + +C I NRT C+ CR + C+R GM+ Sbjct: 34 RNQICRVCDEPAAGYH--FGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGMS 107
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 65.855 bits (159), Expect = 4.046e-11 Identity = 32/85 (37.65%), Postives = 45/85 (52.94%), Query Frame = 0 Query: 507 ICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDR 591 +C +C + H++YG C SCRAFFRR V T C C I+ + R C+ CR+K C+ +GM V++E EK R Sbjct: 90 VCNVCGDKAPD-HIHYGGIACFSCRAFFRRSVPKHTT--YFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSR 171
BLAST of daf-12 c1 vs. SwissProt
Match: gi|10720139|sp|Q9XTJ4.1|NHR3_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-3) HSP 1 Score: 86.6557 bits (213), Expect = 2.813e-16 Identity = 43/118 (36.44%), Postives = 60/118 (50.85%), Query Frame = 0 Query: 477 QGVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRN 594 Q + SLL+P S S E G G S IC++C + H YG C C+ FFRR V++GK C+ S C I + R CR CRF+ C+ GM +A+ + +K R +N Sbjct: 22 QTFSMESLLKPELGEYSPSGENGIDGEESTICSVCCDEASGRH--YGVVACFGCKGFFRRTVRAGKN--YVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKTGRQKN 135
BLAST of daf-12 c1 vs. SwissProt
Match: gi|75025546|sp|Q9U2R6.2|NHR91_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-91) HSP 1 Score: 79.337 bits (194), Expect = 5.521e-14 Identity = 44/120 (36.67%), Postives = 61/120 (50.83%), Query Frame = 0 Query: 487 PSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRF---RNYDNMWKRAK 603 P+ DS S S SK+C++C S H YGA TC C+ FF+R VQ+ K C + + C I NR +C+ CRF+ CI GM EAV + DR RN ++++ K Sbjct: 83 PTTDSTSN----AVSKSSSKLCSVCGDKSTGLH--YGAATCEGCKGFFKRSVQNKKV--YHCSQDNCCEIDKQNRNRCQSCRFRKCISKGMLTEAV-----REDRMPGGRNGNSIYSNYK 189
BLAST of daf-12 c1 vs. SwissProt
Match: gi|17369898|sp|Q9XUK7.2|NHR85_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-85) HSP 1 Score: 77.7962 bits (190), Expect = 2.314e-13 Identity = 46/148 (31.08%), Postives = 73/148 (49.32%), Query Frame = 0 Query: 459 PAWERDGFKVSNVAMYVNQGVNSNSLLEPSNDSLSGS-----EEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAV-MNELEKHDRFRNYDNMWK 600 P D F +S + V N + E + +L GS +E ++ + +C +C + FH YG C C+ FFRR +Q T R AC R++ C I +NR +C+ CR K C+ GM+ +AV + K ++ R ++ M K Sbjct: 61 PQPAMDTFYMSAIQSLVVSTTNDDQYSE--HGALEGSKSLAKDENASTSAGTILCQVCSDKASGFH--YGVFACEGCKGFFRRSIQQKITYR-ACTRAEDCLILRNNRNRCQCCRLKKCLAVGMSRDAVRFGRVPKREKARMFEEMQK 203
BLAST of daf-12 c1 vs. SwissProt
Match: gi|148886624|sp|P41235.3|HNF4A_HUMAN (RecName: Full=Hepatocyte nuclear factor 4-alpha; Short=HNF-4-alpha; AltName: Full=Nuclear receptor subfamily 2 group A member 1; AltName: Full=Transcription factor 14; Short=TCF-14; AltName: Full=Transcription factor HNF-4) HSP 1 Score: 75.8702 bits (185), Expect = 7.476e-13 Identity = 36/84 (42.86%), Postives = 47/84 (55.95%), Query Frame = 0 Query: 505 SKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 S +CAIC + H YGA +C C+ FFRR V+ K +C+ S C + R +CR CR K C RAGM EAV NE ++ Sbjct: 57 SALCAICGDRATGKH--YGASSCDGCKGFFRRSVR--KNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDR 136
BLAST of daf-12 c1 vs. SwissProt
Match: gi|148886626|sp|P22449.3|HNF4A_RAT (RecName: Full=Hepatocyte nuclear factor 4-alpha; Short=HNF-4-alpha; AltName: Full=Nuclear receptor subfamily 2 group A member 1; AltName: Full=Transcription factor 14; Short=TCF-14; AltName: Full=Transcription factor HNF-4) HSP 1 Score: 75.0998 bits (183), Expect = 1.221e-12 Identity = 36/84 (42.86%), Postives = 47/84 (55.95%), Query Frame = 0 Query: 505 SKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 S +CAIC + H YGA +C C+ FFRR V+ K +C+ S C + R +CR CR K C RAGM EAV NE ++ Sbjct: 57 SALCAICGDRATGKH--YGASSCDGCKGFFRRSVR--KNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDR 136
BLAST of daf-12 c1 vs. SwissProt
Match: gi|148886625|sp|P49698.2|HNF4A_MOUSE (RecName: Full=Hepatocyte nuclear factor 4-alpha; Short=HNF-4-alpha; AltName: Full=Nuclear receptor subfamily 2 group A member 1; AltName: Full=Transcription factor 14; Short=TCF-14; AltName: Full=Transcription factor HNF-4) HSP 1 Score: 75.0998 bits (183), Expect = 1.253e-12 Identity = 36/84 (42.86%), Postives = 47/84 (55.95%), Query Frame = 0 Query: 505 SKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 S +CAIC + H YGA +C C+ FFRR V+ K +C+ S C + R +CR CR K C RAGM EAV NE ++ Sbjct: 57 SALCAICGDRATGKH--YGASSCDGCKGFFRRSVR--KNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDR 136
BLAST of daf-12 c1 vs. SwissProt
Match: gi|148886627|sp|Q91766.2|HNF4A_XENLA (RecName: Full=Hepatocyte nuclear factor 4-alpha; Short=HNF-4-alpha; AltName: Full=Nuclear receptor subfamily 2 group A member 1) HSP 1 Score: 75.0998 bits (183), Expect = 1.257e-12 Identity = 40/98 (40.82%), Postives = 52/98 (53.06%), Query Frame = 0 Query: 491 SLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 SLS S G + +CAIC + H YGA +C C+ FFRR V+ K +C+ S C + R +CR CR K C RAGM EAV NE ++ Sbjct: 47 SLSASNSIGINS----LCAICGDRATGKH--YGASSCDGCKGFFRRSVR--KNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDR 136
BLAST of daf-12 c1 vs. SwissProt
Match: gi|81907060|sp|Q9QWM1.1|NR5A2_RAT (RecName: Full=Nuclear receptor subfamily 5 group A member 2; AltName: Full=FTZ-F1 beta; AltName: Full=Liver receptor homolog 1; Short=LRH-1) HSP 1 Score: 75.0998 bits (183), Expect = 1.665e-12 Identity = 39/103 (37.86%), Postives = 53/103 (51.46%), Query Frame = 0 Query: 506 KICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRNYDN----MWKRAKG 604 ++C +C +H YG TC SC+ FF+R VQ+ K R C + C I + R +C CRFK CI GM +EAV + DR R N M+KR + Sbjct: 105 ELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNQK--RYTCIENQNCQIDKTQRKRCPYCRFKKCIDVGMKLEAV-----RADRMRGGRNKFGPMYKRDRA 198
BLAST of daf-12 c1 vs. SwissProt
Match: gi|7676159|sp|P45448.3|NR5A2_MOUSE (RecName: Full=Nuclear receptor subfamily 5 group A member 2; AltName: Full=Liver receptor homolog 1; Short=LRH-1) HSP 1 Score: 75.0998 bits (183), Expect = 1.708e-12 Identity = 39/103 (37.86%), Postives = 53/103 (51.46%), Query Frame = 0 Query: 506 KICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRNYDN----MWKRAKG 604 ++C +C +H YG TC SC+ FF+R VQ+ K R C + C I + R +C CRFK CI GM +EAV + DR R N M+KR + Sbjct: 105 ELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNQK--RYTCIENQNCQIDKTQRKRCPYCRFKKCIDVGMKLEAV-----RADRMRGGRNKFGPMYKRDRA 198
BLAST of daf-12 c1 vs. SwissProt
Match: gi|75063008|sp|Q6QMY5.1|ERR1_CANFA (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 73.559 bits (179), Expect = 3.176e-12 Identity = 42/130 (32.31%), Postives = 62/130 (47.69%), Query Frame = 0 Query: 506 KICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRNYDNMWKRAKGEGDPDEEEAGSPPVPQKIQFMAKPHGSAAGP 635 ++C +C + +H YG +C +C+AFF+R +Q + +C S+ C I+ R C+ CRF C+R GM E V + DR R +KR + E D P+P F A P A GP Sbjct: 77 RLCLVCGDVASGYH--YGVASCEACKAFFKRTIQG--SIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGV-----RLDRVRGGRQKYKR-RPEVD---------PLPFPGSFPAGPLAVAGGP 187
BLAST of daf-12 c1 vs. nr
Match: gi|657600362|gb|AID52842.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 625.935 bits (1613), Expect = 0.000e+0 Identity = 298/491 (60.69%), Postives = 378/491 (76.99%), Query Frame = 0 Query: 735 KVEPRDI-EVVDQRVAPRLCSTGEHRQVLFLSLIWSESLSKMKINQRFLDSLIQFHKHSGVYTKPMLHEHLKTIGQHFLDFAVQIPEFKALTPNDQVKQLDRAVPMFISFIFAKYLGLPTGSEQFQWLFLLKSIPVDLQPTSFYEVNLALNLLQDTRKTVQCGNLVDIVAKIQVDLSKVFTVACACLFDPHPETQYDSLEQLVQSQETVLGYFALDRGHLWELIDAINRLSEIYTKMDWNNPMSISTLRMPFTDVEENWMDQGWSLINRCFQKVPLGEDHIKQVIASELFDVPFPPNFFRNYLGLWSKRFLAILQLFDEFQDLSNENQCRLWQSISNKLFSITMIKFESLPDAVSQLRFALGFEDMNTLEEMIRPWGTILEVMPRMGMKRSNRLNKFFDKAMEGRIEVMKREVAEVLQDVQIFSNCFMFLLFSQGKCMFPGYRIATLSDQYLRGMYRKLDAETVDPTIAIARLDKCLSNLDPYQELCDTLF 1224 K EP ++ E DQ +T EHRQVL LSL+WSE LSKMKINQRFLDSLIQFHK +G YTK M+ +HL IG F D+A QIPEFK L+ NDQ KQL+RA+PMFISFIFAKYLG GSEQFQWLFLLKS P+D+ PT+ Y VNL+LNLLQDT KT +C NL+ +AKI VD SKVFT+ACACLF+PHPE + DS+EQ++Q+QE VLGYF+LDRG LWELIDA RLS +Y M W + + ++++PFTD+E +WMD+ +I++ FQ+V LGE+H+K VIASELF+VPFPPNFF+ YL LWSKRFL ILQ F+EF LS+ NQC LWQ+ + K+F++T+IKFE PDA+SQLRFALG ED+ TLEEMIRPWG I EVMP+MGMKRSNR+NKFFDK E IE MK +A+V+ D +IF N FM+LL ++ K + P IA++ D++L +YRKLD + D +++ +L+KC+++L+ Y + LF Sbjct: 321 KREPSEVQETEDQHP-----TTTEHRQVLLLSLLWSECLSKMKINQRFLDSLIQFHKRTGSYTKAMILDHLNNIGALFQDYAKQIPEFKTLSTNDQHKQLERAIPMFISFIFAKYLGSTNGSEQFQWLFLLKSTPIDIDPTNLYAVNLSLNLLQDTVKTARCENLIKTIAKIPVDQSKVFTIACACLFEPHPEAECDSVEQIIQNQEKVLGYFSLDRGSLWELIDATRRLSLLYASMSWESTPRLKSIQLPFTDMENSWMDEACLMISKSFQEVALGEEHMKHVIASELFEVPFPPNFFQEYLKLWSKRFLTILQGFEEFNTLSSANQCLLWQATAKKVFTMTLIKFEHEPDAISQLRFALGVEDIQTLEEMIRPWGAIPEVMPKMGMKRSNRVNKFFDKEQEEIIEEMKSSIAKVIDDKKIFGNLFMYLLLAEAKNVLPKESIASIGDRHLTVLYRKLDNDG-DSKVSVDQLNKCIADLNTYNAQIEPLF 805 HSP 2 Score: 193.356 bits (490), Expect = 4.969e-47 Identity = 84/131 (64.12%), Postives = 108/131 (82.44%), Query Frame = 0 Query: 473 MYVNQGVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRNYDNMWKRAK 603 M + G N++ E +N+S + SGRRSKICAICLTNS+SFHLNYGAPTCLSCRAFFRRIVQ+G+ ++L CKR++ C+++ SNRTKCRKCR +AC++AGMNM++VMNE++KHDRFRNYD MWKR + Sbjct: 1 MSEDDGDNNSPKPETTNES-NDKFPDDPSGRRSKICAICLTNSDSFHLNYGAPTCLSCRAFFRRIVQNGRVNKLTCKRNNDCDVTQSNRTKCRKCRLEACLKAGMNMQSVMNEIQKHDRFRNYDKMWKRTR 130
BLAST of daf-12 c1 vs. nr
Match: gi|657600358|gb|AID52840.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 95.1301 bits (235), Expect = 2.604e-16 Identity = 45/106 (42.45%), Postives = 61/106 (57.55%), Query Frame = 0 Query: 489 NDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRN 594 +D SG E S ++ C IC + HL+YGA TC SC+AFFRR QS + CK + CN+ + R KCRKCR++ CIR GM V+++ EK RF+ Sbjct: 10 DDGTSGMETEDVSMEPTEECQIC-QDPAIRHLHYGAITCFSCKAFFRRTSQSKAYQKFMCKSTGECNVLHKLRKKCRKCRYEKCIRVGMKPSLVLSDEEKIKRFKK 114
BLAST of daf-12 c1 vs. nr
Match: gi|17568425|ref|NP_510423.1| (Nuclear hormone receptor family member nhr-3 [Caenorhabditis elegans] >gi|10720139|sp|Q9XTJ4.1|NHR3_CAEEL RecName: Full=Nuclear hormone receptor family member nhr-3 >gi|3878017|emb|CAA16168.1| Nuclear hormone receptor family member nhr-3 [Caenorhabditis elegans] >gi|4139070|gb|AAD03680.1| nuclear receptor NHR-3 [Caenorhabditis elegans] >gi|10197967|gb|AAG15118.1| nuclear receptor NHR-3 [Caenorhabditis elegans]) HSP 1 Score: 86.6557 bits (213), Expect = 8.720e-14 Identity = 43/118 (36.44%), Postives = 60/118 (50.85%), Query Frame = 0 Query: 477 QGVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRN 594 Q + SLL+P S S E G G S IC++C + H YG C C+ FFRR V++GK C+ S C I + R CR CRF+ C+ GM +A+ + +K R +N Sbjct: 22 QTFSMESLLKPELGEYSPSGENGIDGEESTICSVCCDEASGRH--YGVVACFGCKGFFRRTVRAGKN--YVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKTGRQKN 135
BLAST of daf-12 c1 vs. nr
Match: gi|1325258266|ref|XP_023325470.1| (uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258271|ref|XP_023325479.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258277|ref|XP_023325484.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258282|ref|XP_023325492.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258289|ref|XP_023325500.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258292|ref|XP_023325508.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258296|ref|XP_023325515.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258300|ref|XP_023325523.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258306|ref|XP_023325531.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258311|ref|XP_023325539.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258315|ref|XP_023325547.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258319|ref|XP_023325554.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258329|ref|XP_023325561.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258334|ref|XP_023325570.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258338|ref|XP_023325578.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258342|ref|XP_023325585.1| uncharacterized protein LOC111699122 [Eurytemora affinis]) HSP 1 Score: 85.5001 bits (210), Expect = 3.967e-13 Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 0 Query: 508 CAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFR 593 C IC + H++YGA TC SCRAFFRR +Q+ + C+RS C I+ R C+ CR++ C+ GM V++E E+ RFR Sbjct: 41 CKIC-NEPAAKHIHYGAMTCFSCRAFFRRSIQNKTANSYTCRRSQNCEINLRTRKNCQFCRYQKCLSVGMKTNWVLSEEERQRRFR 125
BLAST of daf-12 c1 vs. nr
Match: gi|926653773|ref|XP_013793497.1| (vitamin D3 receptor-like, partial [Limulus polyphemus]) HSP 1 Score: 80.4925 bits (197), Expect = 6.998e-13 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 0 Query: 481 SNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 S + +EP++ S T ++ K C +C ++S+H +G +C SC+AFFRR VQS C TC I+ S+R C+ CRF+ C+ GM VM E E+ Sbjct: 8 SATFIEPTDPSF-------TPAKKLKFCKVCGDRAKSYH--FGGLSCDSCKAFFRRSVQSAGYKNFQCPYRRTCEITISSRKCCQFCRFQKCVAIGMEKGWVMTEEER 106
BLAST of daf-12 c1 vs. nr
Match: gi|1241828755|gb|PBC25281.1| (Transcription factor HNF-4 [Apis cerana cerana]) HSP 1 Score: 80.1073 bits (196), Expect = 7.846e-13 Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 0 Query: 491 SLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 +LSGS G G S+ CAIC + H YGA +C C+ FFRR V+ K C+ S C I R +CR CR + C +AGM MEAV NE ++ Sbjct: 12 TLSGS---GVGGVLSQHCAICGDRATGKH--YGAASCDGCKGFFRRSVR--KKHEYTCRFSRNCIIDKDKRNQCRYCRLRKCFKAGMKMEAVQNERDR 102
BLAST of daf-12 c1 vs. nr
Match: gi|1316197142|ref|XP_023244311.1| (hepatocyte nuclear factor 4-gamma-like [Centruroides sculpturatus]) HSP 1 Score: 83.1889 bits (204), Expect = 7.902e-13 Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 0 Query: 478 GVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 G+NS +LL ND+++ + + + C+IC + H YGA +C C+ FFRR V+ K R C++ C I + R +CR CRFK C + GM +EAV NE +K Sbjct: 79 GLNSGNLLSNQNDNVNIVSSSSDNQQFNFECSICGDKASGKH--YGAYSCDGCKGFFRRSVR--KNQRYRCRKDSNCIIDKNGRNQCRFCRFKKCYQVGMKIEAVQNERDK 185
BLAST of daf-12 c1 vs. nr
Match: gi|675863136|ref|XP_009017128.1| (hypothetical protein HELRODRAFT_79060, partial [Helobdella robusta] >gi|555701316|gb|ESO04549.1| hypothetical protein HELRODRAFT_79060, partial [Helobdella robusta]) HSP 1 Score: 78.5666 bits (192), Expect = 1.000e-12 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 0 Query: 504 RSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEA 581 RS C +C S FH +GA TC C+ FFRR+++ + C + CNI +NRT C+ CRF CI+ GM +E Sbjct: 80 RSIPCKVCKAPSSGFH--FGAITCEGCKGFFRRMLKEQVHRKFICSNDERCNIDSANRTTCKSCRFNKCIKIGMTLEG 155
BLAST of daf-12 c1 vs. nr
Match: gi|572316407|ref|XP_006623829.1| (PREDICTED: transcription factor HNF-4 homolog isoform X1 [Apis dorsata]) HSP 1 Score: 83.1889 bits (204), Expect = 1.046e-12 Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 0 Query: 466 FKVSNVAMYVNQGVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 F+V + + + G S+L +LSGS G G S+ CAIC + H YGA +C C+ FFRR V+ K C+ S C I R +CR CR + C +AGM MEAV NE ++ Sbjct: 8 FEVLDADLSMGAGAAGGSVL-----TLSGS---GVGGVLSQHCAICGDRATGKH--YGAASCDGCKGFFRRSVR--KKHEYTCRFSRNCIIDKDKRNQCRYCRLRKCFKAGMKMEAVQNERDR 118
BLAST of daf-12 c1 vs. nr
Match: gi|572316409|ref|XP_006623830.1| (PREDICTED: transcription factor HNF-4 homolog isoform X2 [Apis dorsata]) HSP 1 Score: 83.1889 bits (204), Expect = 1.094e-12 Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 0 Query: 466 FKVSNVAMYVNQGVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 F+V + + + G S+L +LSGS G G S+ CAIC + H YGA +C C+ FFRR V+ K C+ S C I R +CR CR + C +AGM MEAV NE ++ Sbjct: 8 FEVLDADLSMGAGAAGGSVL-----TLSGS---GVGGVLSQHCAICGDRATGKH--YGAASCDGCKGFFRRSVR--KKHEYTCRFSRNCIIDKDKRNQCRYCRLRKCFKAGMKMEAVQNERDR 118 The following BLAST results are available for this feature:
BLAST of daf-12 c1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 23
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BLAST of daf-12 c1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of daf-12 c1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold497_size155254:103658..142498- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold497_size155254-processed-gene-0.9 ID=snap_masked-scaffold497_size155254-processed-gene-0.9|Name=daf-12 c1|organism=Tigriopus kingsejongensis|type=gene|length=38841bp|location=Sequence derived from alignment at scaffold497_size155254:103658..142498- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'daf-12 c1' has the following synonyms
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