cuticle protein 6, maker-scaffold1055_size66517-snap-gene-0.7 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011035 (supercontig:LSalAtl2s:LSalAtl2s743:76924:89115:-1 gene:EMLSAG00000011035 transcript:EMLSAT00000011035 description:"maker-LSalAtl2s743-snap-gene-1.15") HSP 1 Score: 108.612 bits (270), Expect = 1.337e-27 Identity = 57/99 (57.58%), Postives = 68/99 (68.69%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGP----VNDLV---SPVYEGVAPEPVEDTPE 252 SSQ+ SQDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V YIADGLG+R + LP+ P LV +PV+EG E + DTPE Sbjct: 286 SSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQTVSYIADGLGFRTVDSRLPIAPKVPEXEPLVQPEAPVFEG---EQIPDTPE 381 HSP 2 Score: 102.449 bits (254), Expect = 2.420e-25 Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 SSQ+ SQDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R P+ +PV+EG E + DTPE Sbjct: 97 SSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQTVSYVADGLGFRT--------PLVQPEAPVFEG---EQIPDTPE 177
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011034 (supercontig:LSalAtl2s:LSalAtl2s743:38931:72657:1 gene:EMLSAG00000011034 transcript:EMLSAT00000011034 description:"maker-LSalAtl2s743-augustus-gene-0.7") HSP 1 Score: 109.768 bits (273), Expect = 1.531e-27 Identity = 75/170 (44.12%), Postives = 91/170 (53.53%), Query Frame = 0 Query: 94 AAPYSAGL------PYAAGYHPYSVGLPYAAANLPYT-YTGAPLAASLPVTYQNQLGRIQYNAAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP----EPVEDTPE 252 AAPY G PY GY PYAA YT + AP AA G + ++ AP A SSQ+ SQDEFGN+ +GY+NINSAK E GN YGG G Y YVDANG+ Q V Y+ADGLG+R + LPV P P+ + AP + + DTPE Sbjct: 344 AAPYIGGYAAHHATPYVGGY-----AAPYAAG---YTAHHAAPYAA----------GYVAHHXAPYAAGYGYPASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGDAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAVPEAEPLVQAPAPVFEGKQIPDTPE 495 HSP 2 Score: 102.064 bits (253), Expect = 7.402e-25 Identity = 68/172 (39.53%), Postives = 94/172 (54.65%), Query Frame = 0 Query: 75 ALLVIVLSSVLAAASAGIIAAPYSAGLPYAAGYHPYSVGLPYAAANLPYTYTGAPLAASLPVTYQNQLGRIQYNAAPVVAA-PLAHVS---------------SQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGP 230 + + + + + A+A+ G+I+ PY G+H Y+ PY +P T AP A L V +Q AP+V P+ HV+ SQ+ +QDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R + LP+ P Sbjct: 3 SFITLAVLATFASANGGLIS-PYF-------GHHGYA---PY----VPIIRTLAPKEAELKVETIEPPKEVQPIIAPLVPHYPVPHVAPHALHYAAGXGXPAXSQFHAQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPIAP 159
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000012778 (supercontig:LSalAtl2s:LSalAtl2s96:46461:47672:-1 gene:EMLSAG00000012778 transcript:EMLSAT00000012778 description:"maker-LSalAtl2s96-augustus-gene-0.9") HSP 1 Score: 92.4337 bits (228), Expect = 5.389e-22 Identity = 63/150 (42.00%), Postives = 72/150 (48.00%), Query Frame = 0 Query: 77 LVIVLSSVLAAASAGIIAAPYSAGLPYAAGYHPYSVGLPYAAANLPYTYTGAPLAASLPVTYQNQLGRIQYNAAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNL 226 +IVL++ L AASA I P G PYA PY PY A PYT SSQ+ SQDE+GN YGY N+NS K E GNAYG V G YSY+DA G Q VDY+AD G+R TNL Sbjct: 3 YLIVLTATLVAASASFIGHP---GYPYAP--QPYHQVAPYYA---PYT-----------------------------------PSSQHHSQDEYGNFAYGYENVNSQKSESGNAYGAVKGQYSYIDAYGKSQTVDYVADDYGFRASGTNL 109 HSP 2 Score: 88.5817 bits (218), Expect = 1.153e-20 Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 0 Query: 160 VSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNL 226 SSQY++QDE+ N ++GYAN NS +QE GN YGGV+GSYSYVD G P V+Y+AD LG+R T+L Sbjct: 183 ASSQYRTQDEYDNFSFGYANENSQRQESGNGYGGVSGSYSYVDXYGKPHTVNYVADDLGFRATGTDL 249 HSP 3 Score: 87.8113 bits (216), Expect = 2.666e-20 Identity = 44/80 (55.00%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 151 PVVAAPLAHV----SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNL 226 P+ + P H SSQY SQDE+ N NYGY NINS K E GNA V GSYSY+D+ G Q V+Y+ADG G+R TNL Sbjct: 289 PIASIPAYHAPAVASSQYHSQDEYDNYNYGYQNINSQKSESGNARDAVKGSYSYIDSYGKSQTVNYVADGYGFRASGTNL 368
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000002943 (supercontig:LSalAtl2s:LSalAtl2s168:685699:687161:1 gene:EMLSAG00000002943 transcript:EMLSAT00000002943 description:"augustus_masked-LSalAtl2s168-processed-gene-6.0") HSP 1 Score: 80.1073 bits (196), Expect = 1.223e-18 Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATN 225 ++Q+ SQ+EFGN N+GY+N NSA +E + YG V GSYSYVDA GI + V Y+AD G+R+ +TN Sbjct: 110 ATQFHSQNEFGNANFGYSNENSALEESRDEYGNVVGSYSYVDATGINRHVSYVADDGGFRITSTN 174
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011036 (supercontig:LSalAtl2s:LSalAtl2s743:94413:95794:1 gene:EMLSAG00000011036 transcript:EMLSAT00000011036 description:"maker-LSalAtl2s743-augustus-gene-1.11") HSP 1 Score: 73.559 bits (179), Expect = 1.378e-15 Identity = 59/143 (41.26%), Postives = 74/143 (51.75%), Query Frame = 0 Query: 116 YAAANLPYTYTGAPLAASLPVTY--QNQLGRIQYNAAPVV----AAPLAH-VSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTP 251 YAA ++P AP + PV + + L + AAPV AA + SSQ+ SQDE GN+ +GY+NINSAK E GN Y GV G Y YVDAN VD + LP P L +PV+E +PV DTP Sbjct: 151 YAAPHVP---AIAPTVKNTPVNFAPHHALNYVSPYAAPVAGQFYAAGFGYPASSQFHSQDELGNLQFGYSNINSAKYEQGNTYSGVNGGYQYVDAN-----VD------------SRLPAAP---LKAPVFER---KPVSDTP 267
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011961 (supercontig:LSalAtl2s:LSalAtl2s84:1186001:1208377:1 gene:EMLSAG00000011961 transcript:EMLSAT00000011961 description:"maker-LSalAtl2s84-snap-gene-12.12") HSP 1 Score: 72.4034 bits (176), Expect = 7.844e-15 Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0 Query: 162 SQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSP 237 S + SQD+ G N+GY + +K EV A G V G Y Y+DANGI Q V YI+D G+RV +NLP+ P VSP Sbjct: 44 SIFHSQDDQGGYNFGYESDRESKTEVKTADGVVRGKYKYIDANGILQTVYYISDDKGFRVXXSNLPIXPEEPHVSP 119 HSP 2 Score: 59.6918 bits (143), Expect = 1.523e-10 Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 0 Query: 163 QYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRV 221 Q+ +Q+EFG YG++N ++K E+ G V GSYSY+DANG Q +YI+D LG+R+ Sbjct: 499 QFHAQNEFGEYKYGFSNPTASKNEI-KVDGIVRGSYSYIDANGEFQITNYISDALGFRL 556 HSP 3 Score: 56.9954 bits (136), Expect = 1.421e-9 Identity = 35/89 (39.33%), Postives = 49/89 (55.06%), Query Frame = 0 Query: 164 YQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 + +D+ G+ +GY + +S + E G V GSY Y+DA+G Q V Y+AD G+RVK TN+PV N V V+DTPE Sbjct: 269 FHVKDKDGHYAFGYEDQHSKRTE-ARYEGTVRGSYDYIDADGNVQTVHYVADKEGFRVKGTNIPVA--NQEV-----------VQDTPE 343
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000005067 (supercontig:LSalAtl2s:LSalAtl2s266:430378:430665:-1 gene:EMLSAG00000005067 transcript:EMLSAT00000005067 description:"augustus_masked-LSalAtl2s266-processed-gene-3.1") HSP 1 Score: 63.1586 bits (152), Expect = 2.253e-13 Identity = 32/69 (46.38%), Postives = 40/69 (57.97%), Query Frame = 0 Query: 188 GNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP----EPVEDTPE 252 GN YGGV G Y YVDANG+ Q V Y+ADG G+R + PV P P+ + AP + + DTPE Sbjct: 4 GNTYGGVAGGYQYVDANGVLQSVSYVADGFGFRTVDSRFPVAPAVPEAEPLVQAPAPVFEGKQIPDTPE 72
BLAST of cuticle protein 6 vs. SwissProt
Match: gi|48427980|sp|P82120.1|CUO7_BLACR (RecName: Full=Cuticle protein 7; AltName: Full=BcNCP15.0) HSP 1 Score: 68.5514 bits (166), Expect = 2.292e-13 Identity = 50/146 (34.25%), Postives = 67/146 (45.89%), Query Frame = 0 Query: 113 GLPYAAANL------PYTYTGAPLAASLPVTYQNQLGRIQYNAAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 G Y +A+L PYTY +P N A V AP+ +V++ Y +QD G +YG+ + A V +A G GSYSYV G + +Y+AD G+ V + LPVGP V P PV DTPE Sbjct: 8 GFSYTSASLSPYVYAPYTYAASPYI----------------NPASVAVAPV-NVATSYHAQDVIGQASYGHVDAYQAHHAVQDAAGNKVGSYSYVSPEGKVVKTNYVADATGFHVASNALPVGPT----------VVPAPVVDTPE 126
BLAST of cuticle protein 6 vs. SwissProt
Match: gi|48427979|sp|P82119.1|CUO6_BLACR (RecName: Full=Cuticle protein 6; AltName: Full=BcNCP14.9) HSP 1 Score: 63.5438 bits (153), Expect = 1.605e-11 Identity = 43/105 (40.95%), Postives = 53/105 (50.48%), Query Frame = 0 Query: 155 APLAH------VSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYR-VKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 AP+ H VS+QY +QD G + +A N + E + G V G Y YVD G V Y+AD G+R V A NLP P V V PEPV+DTPE Sbjct: 10 APIHHYTVPVQVSTQYHAQDILGQFAFHHAGDNQVRTETKSFDGSVRGLYGYVDPTGKLVNVHYVADSNGFRVVGANNLPEAPSAPAVPDVK---GPEPVQDTPE 111
BLAST of cuticle protein 6 vs. SwissProt
Match: gi|1345867|sp|P80518.1|CU55_ARADI (RecName: Full=Adult-specific rigid cuticular protein 15.5; Short=ACP 15.5) HSP 1 Score: 56.6102 bits (135), Expect = 6.613e-9 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0 Query: 165 QSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVK-ATNLP 227 ++QD GN + Y N+A+ E+G+A G GSY+ D +G +RVDY+AD G+R TN P Sbjct: 18 KTQDGIGNYAFNYGTANNARAEIGDAAGNKQGSYTITDVDGRARRVDYVADAAGFRASVKTNEP 81
BLAST of cuticle protein 6 vs. nr
Match: gi|1325277591|ref|XP_023323434.1| (cuticle protein 7-like [Eurytemora affinis]) HSP 1 Score: 132.109 bits (331), Expect = 9.202e-34 Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVND----------LVSPVYEGVAPEPVEDTPE 252 +SQ+ +QDEFGN+NYGY+NINSAKQE+GN YGGV+GSYSYVD NG Q+V+Y+AD LG+RV + LPV PV+ LV+PV GVAP PVEDTPE Sbjct: 74 NSQFHAQDEFGNLNYGYSNINSAKQEIGNTYGGVSGSYSYVDPNGELQQVNYVADALGFRVADSRLPVAPVDTGVAPEFNPEPLVAPVDNGVAPAPVEDTPE 175
BLAST of cuticle protein 6 vs. nr
Match: gi|225712386|gb|ACO12039.1| (Cuticle protein 6 [Lepeophtheirus salmonis]) HSP 1 Score: 117.472 bits (293), Expect = 3.121e-28 Identity = 77/165 (46.67%), Postives = 94/165 (56.97%), Query Frame = 0 Query: 94 AAPYSAGL--PYAAGYHPYSVGLPYAAANLPYTYTGAPLAASLPVTYQNQLGRIQYNAAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP----EPVEDTPE 252 AAPY AG PY AGY + PYAA + + AP AA G + +AAP A SSQ+ SQDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R + LPV P P+ + AP + + DTPE Sbjct: 85 AAPYVAGYAAPYVAGYTAHHAA-PYAAGYV--AHHAAPYAA----------GYVAPHAAPYAAGYGYPASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAVPEAEPLVQAPAPVFEGKQIPDTPE 236
BLAST of cuticle protein 6 vs. nr
Match: gi|290561232|gb|ADD38018.1| (Cuticle protein 6 [Lepeophtheirus salmonis]) HSP 1 Score: 114.005 bits (284), Expect = 2.302e-27 Identity = 80/201 (39.80%), Postives = 108/201 (53.73%), Query Frame = 0 Query: 75 ALLVIVLSSVLAAASAGIIAAPYSAGLPYAAGYHPYSVGLPYAAANLPYTYTGAPLAASLPVTYQNQLGRIQYNAAPVVAA-PLAHV---------------SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGP----VNDLV---SPVYEGVAPEPVEDTPE 252 + + + + + A+A+ GII+ PY G+H Y+ PY +P T AP A L V +Q AP+V P+ HV SSQ+ +QDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R + LP+ P LV +P++EG E + DTPE Sbjct: 3 SFITLAVLATFASANGGIIS-PYF-------GHHGYA---PY----VPIIRTLAPKEAELKVETIEPPKEVQPIIAPLVPHYPVPHVAPHALHYAAGYGYPASSQFHAQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPIAPEVPETEPLVQPEAPIFEG---EQIPDTPE 185
BLAST of cuticle protein 6 vs. nr
Match: gi|155966257|gb|ABU41082.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 108.227 bits (269), Expect = 4.667e-26 Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP----EPVEDTPE 252 SSQ+ SQDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R + LPV P P+ + AP + + DTPE Sbjct: 14 SSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAVPEAEPLVQAPAPVFEGKQIPDTPE 109
BLAST of cuticle protein 6 vs. nr
Match: gi|155966346|gb|ABU41125.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 110.923 bits (276), Expect = 8.395e-26 Identity = 73/169 (43.20%), Postives = 89/169 (52.66%), Query Frame = 0 Query: 94 AAPYSAGL------PYAAGYHPYSVGLPYAAANLPYTYTGAPLAASLPVTYQNQLGRIQYNAAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP----EPVEDTPE 252 AAPY G PY AGY + V PYAA + G + +AAP A SSQ+ SQDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R + LPV P P+ + AP + + DTPE Sbjct: 73 AAPYVGGYTAHHAAPYVAGYAAHHVA-PYAAGY------------AAHHPAPYAAGYVAPHAAPYAAGYGYPASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAVPEAEPLVQAPAPVFEGKQIPDTPE 228
BLAST of cuticle protein 6 vs. nr
Match: gi|290561509|gb|ADD38155.1| (Cuticle protein 6 [Lepeophtheirus salmonis]) HSP 1 Score: 110.538 bits (275), Expect = 1.240e-25 Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 0 Query: 143 GRIQYNAAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP----EPVEDTPE 252 G + +AAP A SSQ+ SQDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R + LPV P P+ + AP + + DTPE Sbjct: 115 GYVAPHAAPYAAGYSYPASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAVPEAEPLVQAPAPVFEGKQIPDTPE 228
BLAST of cuticle protein 6 vs. nr
Match: gi|155966218|gb|ABU41063.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 110.538 bits (275), Expect = 1.422e-25 Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 0 Query: 143 GRIQYNAAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP----EPVEDTPE 252 G + +AAP A SSQ+ SQDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R + LPV P P+ + AP + + DTPE Sbjct: 115 GYVAPHAAPYAAGYGYPASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGRYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAVPEAEPLVQAPAPVFEGKQIPDTPE 228
BLAST of cuticle protein 6 vs. nr
Match: gi|155966338|gb|ABU41121.1| (hypothetical protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 108.997 bits (271), Expect = 3.650e-25 Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 0 Query: 148 NAAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP----EPVEDTPE 252 +AAP A +SQ+ SQDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R + LPV P P+ + AP + + DTPE Sbjct: 116 HAAPYAAGYGYPATSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAVPEAEPLVQAPAPVFEGKQIPDTPE 224
BLAST of cuticle protein 6 vs. nr
Match: gi|225712016|gb|ACO11854.1| (Cuticle protein 6 [Lepeophtheirus salmonis]) HSP 1 Score: 108.612 bits (270), Expect = 6.184e-25 Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP----EPVEDTPE 252 SSQ+ SQDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R + LPV P P+ + AP + + DTPE Sbjct: 129 SSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAVPEAEPLVQAPAPVFEGKQIPDTPE 224
BLAST of cuticle protein 6 vs. nr
Match: gi|1325277200|ref|XP_023323237.1| (uncharacterized protein LOC111697445 [Eurytemora affinis]) HSP 1 Score: 99.7525 bits (247), Expect = 3.418e-20 Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 0 Query: 129 PLAASLPVTYQN---QLGRIQYNAAPVVAAPLA---HVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYE 240 P ++PV Y N Q + YNAAP A+P+ SSQ+ QDEFG NYGY++ NS KQE+ A G V GSY+YVD++G+ Q V+YIAD LG+RV ATNLPV ++ +PV E Sbjct: 363 PAVQTVPVIYANPAVQAAPVVYNAAPA-ASPVQIADASSSQFHVQDEFGQYNYGYSDENSVKQELKTADGVVRGSYTYVDSDGLLQTVNYIADALGFRVGATNLPVHVIDGASAPVAE 479 HSP 2 Score: 92.8189 bits (229), Expect = 8.355e-18 Identity = 59/125 (47.20%), Postives = 79/125 (63.20%), Query Frame = 0 Query: 114 LPYAAA---NLPYT--YTGAPL--AASLPVTYQNQLGRIQYNAAPVV---AAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPV 228 LPYA+ NLP + AP+ AA +P+ N NAAPV+ AP+A V++Q+ +QDE G NYGY+N +K E+ A G G+YSYVDANG+ Q V+YI+D +G+RV ATNLPV Sbjct: 509 LPYASNYEYNLPLSAPVQDAPVVSAAPIPIATVN-------NAAPVIVETTAPVADVNTQFHAQDELGQYNYGYSNPTQSKSEIKTADGITRGTYSYVDANGLIQTVNYISDAMGFRVAATNLPV 626 HSP 3 Score: 88.1965 bits (217), Expect = 3.713e-16 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 0 Query: 149 AAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 A P++ + A +SSQY +QDEFG ++GY++ S +QE A G VTG Y YVD NG+ Q V+YIAD G+RV TNLP+ G P EDTPE Sbjct: 237 AIPIIQSETAPISSQYHAQDEFGQYSFGYSDTGSVRQESKTADGVVTGGYRYVDGNGVIQTVEYIADDAGFRVAGTNLPIA----------YGAGP---EDTPE 327 HSP 4 Score: 84.7297 bits (208), Expect = 4.517e-15 Identity = 45/89 (50.56%), Postives = 57/89 (64.04%), Query Frame = 0 Query: 156 PLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP 244 P SSQY +QDE G NYGY + + +K EV A G V +Y+YVDANG+ Q +YI+D LG+RV ATNLPV V +PV V+P Sbjct: 67 PAGSPSSQYNAQDEIGQYNYGYNSADQSKSEVKTAGGVVKRTYTYVDANGLVQTTNYISDALGFRVAATNLPVHDVEGSAAPVQVAVSP 155 The following BLAST results are available for this feature:
BLAST of cuticle protein 6 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 7
BLAST of cuticle protein 6 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 3
BLAST of cuticle protein 6 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1055_size66517:40135..53020- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1055_size66517-snap-gene-0.7 ID=maker-scaffold1055_size66517-snap-gene-0.7|Name=cuticle protein 6|organism=Tigriopus kingsejongensis|type=gene|length=12886bp|location=Sequence derived from alignment at scaffold1055_size66517:40135..53020- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cuticle protein 6' has the following synonyms
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