GL12665, maker-scaffold1442_size41114-snap-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of GL12665 vs. L. salmonis genes
Match: EMLSAG00000000919 (supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1 gene:EMLSAG00000000919 transcript:EMLSAT00000000919 description:"maker-LSalAtl2s115-augustus-gene-7.11") HSP 1 Score: 193.356 bits (490), Expect = 6.533e-60 Identity = 89/109 (81.65%), Postives = 95/109 (87.16%), Query Frame = 0 Query: 59 YDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 YDKMRPPK G AT V FHVT+MSLDTIDE SMTY DVFFAQ WKD+RL LPDNMT EYRLLP+EWL IWRPDS+FKNAK VTFQTMTIPNHY+WL+KDKTILYMVK Sbjct: 8 YDKMRPPKYKGNATEVLFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLEKIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVK 116
BLAST of GL12665 vs. L. salmonis genes
Match: EMLSAG00000000070 (supercontig:LSalAtl2s:LSalAtl2s100:516339:598693:-1 gene:EMLSAG00000000070 transcript:EMLSAT00000000070 description:"maker-LSalAtl2s100-snap-gene-5.24") HSP 1 Score: 162.54 bits (410), Expect = 1.267e-50 Identity = 74/77 (96.10%), Postives = 77/77 (100.00%), Query Frame = 0 Query: 91 MTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 +TYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDS+FKNAKKVTFQTMTIPNHY+WLYKDKTILYMVK Sbjct: 14 ITYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSFFKNAKKVTFQTMTIPNHYLWLYKDKTILYMVK 90
BLAST of GL12665 vs. L. salmonis genes
Match: EMLSAG00000003120 (supercontig:LSalAtl2s:LSalAtl2s1753:14457:18648:1 gene:EMLSAG00000003120 transcript:EMLSAT00000003120 description:"maker-LSalAtl2s1753-augustus-gene-0.11") HSP 1 Score: 73.559 bits (179), Expect = 5.296e-16 Identity = 37/110 (33.64%), Postives = 58/110 (52.73%), Query Frame = 0 Query: 57 STYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEW--LHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILY 164 ++Y++ P GG V ++ I S+ +DE S +Y D +F Q W D RL N T LP+ W L+ IW+PD+YF N KK +T+PN ++ + D + + Sbjct: 493 TSYNRRIRPNFGGPPCKVIMNLLINSMGPVDEKSQSYLVDAYFRQAWVDQRLSF--NATSSVTELPLNWQILNKIWKPDTYFINGKKSKMHKITVPNRFLRISPDGLVSF 600
BLAST of GL12665 vs. L. salmonis genes
Match: EMLSAG00000004092 (supercontig:LSalAtl2s:LSalAtl2s217:422807:437258:1 gene:EMLSAG00000004092 transcript:EMLSAT00000004092 description:"augustus_masked-LSalAtl2s217-processed-gene-4.1") HSP 1 Score: 68.9366 bits (167), Expect = 1.527e-14 Identity = 36/117 (30.77%), Postives = 57/117 (48.72%), Query Frame = 0 Query: 50 FEDIVDKSTYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHL--IWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILY 164 + ++ ++ YD+ P+ G VS + I S+ +DE + D +F Q W D RL+ + E LP+ W L IWRPD++ N K MT+PN ++ + D I Y Sbjct: 80 LDALLSENRYDRQIRPQIGDSPIKVSVNFAIRSMGPVDEQKQLFLMDCYFRQYWTDPRLVYNSSKLNE---LPMNWQXLTKIWRPDTFIINGKNSYLHKMTVPNRFIRISPDGRISY 193
BLAST of GL12665 vs. L. salmonis genes
Match: EMLSAG00000004091 (supercontig:LSalAtl2s:LSalAtl2s217:408116:410199:1 gene:EMLSAG00000004091 transcript:EMLSAT00000004091 description:"maker-LSalAtl2s217-augustus-gene-4.34") HSP 1 Score: 66.2402 bits (160), Expect = 1.321e-13 Identity = 35/100 (35.00%), Postives = 51/100 (51.00%), Query Frame = 0 Query: 57 STYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHL--IWRPDSYFKNAKKVTFQTMTIPNHYV 154 S YDK PK GG V +++I+S+ +DE ++ D +F Q W D RL T +L + W L IW PD++ N KK +T+PN +V Sbjct: 79 SFYDKRIRPKLGGPPVKVVINLSILSMGPVDEARNAFSMDCYFRQSWVDERL---KYNTSGVEVLALNWAFLAKIWVPDTFIINGKKSFLHKITVPNRFV 175
BLAST of GL12665 vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58") HSP 1 Score: 63.1586 bits (152), Expect = 1.611e-12 Identity = 39/112 (34.82%), Postives = 56/112 (50.00%), Query Frame = 0 Query: 59 YDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPV--EWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVKY 168 YD P GG +V F +TI S D+I E SM Y ++ Q WKD RL T E ++L + ++ IW PD++F N K +T N V L+ D I Y +++ Sbjct: 91 YDIRLRPNFGGDPLYVGFDLTIASFDSISEVSMDYTITMYLNQYWKDERLSFS---TEEDKVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRF 199
BLAST of GL12665 vs. L. salmonis genes
Match: EMLSAG00000009825 (supercontig:LSalAtl2s:LSalAtl2s639:669883:722715:1 gene:EMLSAG00000009825 transcript:EMLSAT00000009825 description:"augustus_masked-LSalAtl2s639-processed-gene-6.2") HSP 1 Score: 58.9214 bits (141), Expect = 3.771e-12 Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 0 Query: 72 THVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 T V + I S +I E +M Y D++ Q W+D RL + + L + IW+P+ YF NAK+ FQ +T+PN + + D ILYM++ Sbjct: 17 TEVGCELFIRSFGSISEKTMDYQVDLYLRQHWEDPRLN-HNAIEEALDLNDPTLVKAIWKPEVYFPNAKEGEFQYVTVPNVLLRIKPDGKILYMLR 111
BLAST of GL12665 vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5") HSP 1 Score: 60.8474 bits (146), Expect = 1.087e-11 Identity = 34/129 (26.36%), Postives = 65/129 (50.39%), Query Frame = 0 Query: 42 GYDEKPLEFEDIVDKSTYDK-MRPPKPGG--GATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 Y +K + D + + YDK +RP G ++ ++ + ++ ID+ M Y+ V F ++W D RL D+ + L + +W PD++F+N K+ + +PN YV ++ + ILY ++ Sbjct: 7 NYRQKEKQVLDSILGTGYDKRIRPSGKNDTDGPATINVNIYLRTISRIDDVKMEYSVQVTFREQWNDERLRYYDDTHGHLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIR 135
BLAST of GL12665 vs. L. salmonis genes
Match: EMLSAG00000002942 (supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-1 gene:EMLSAG00000002942 transcript:EMLSAT00000002942 description:"maker-LSalAtl2s168-augustus-gene-6.6") HSP 1 Score: 57.7658 bits (138), Expect = 1.169e-10 Identity = 39/119 (32.77%), Postives = 59/119 (49.58%), Query Frame = 0 Query: 52 DIVDK--STYDKMRPPKPG-GGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 DI+D YD+ P G AT V+ + + SL +I+ +M D++ Q W D RL P + L + +W+P+ YF NAK FQ +T+PN V + ILYM++ Sbjct: 10 DILDSLLQNYDRRATPTNHIGKATEVAIKLYVRSLGSINPDTMVI--DLYLRQHWFDSRLNHP-GLLEPMDLNDPNLVKALWKPEVYFPNAKDAEFQYVTVPNVLVRIDPGGAILYMLR 125
BLAST of GL12665 vs. L. salmonis genes
Match: EMLSAG00000010137 (supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 gene:EMLSAG00000010137 transcript:EMLSAT00000010137 description:"snap_masked-LSalAtl2s66-processed-gene-1.3") HSP 1 Score: 55.0694 bits (131), Expect = 1.079e-9 Identity = 26/77 (33.77%), Postives = 43/77 (55.84%), Query Frame = 0 Query: 91 MTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 M Y D + Q+W D RL PD + L + IW+P+ +F NAK+ FQ +T+PN + ++ + ILY+++ Sbjct: 1 MDYVTDTYLRQKWSDSRLSHPD-IKSPLDLAXPNLVKAIWKPEVFFPNAKEANFQFVTVPNVLIRIHPNGEILYILR 76
BLAST of GL12665 vs. SwissProt
Match: gi|57012755|sp|Q24352.1|GBRAL_DROME (RecName: Full=Gamma-aminobutyric acid receptor alpha-like; AltName: Full=GABA(A) receptor alpha-like and glycine receptor-like subunit of Drosophila; Short=GRD; Flags: Precursor) HSP 1 Score: 72.7886 bits (177), Expect = 2.848e-14 Identity = 37/106 (34.91%), Postives = 54/106 (50.94%), Query Frame = 0 Query: 59 YDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILY 164 YD P GG + + + S+ I E MTY+ D +F Q W D RL ++ L V L IW+PD+YF N K+ T+T PN +V +Y++ +LY Sbjct: 120 YDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDKRLAF--EGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLY 223
BLAST of GL12665 vs. SwissProt
Match: gi|120775|sp|P24045.1|GBRB4_CHICK (RecName: Full=Gamma-aminobutyric acid receptor subunit beta-4; AltName: Full=GABA(A) receptor subunit beta-4; Flags: Precursor) HSP 1 Score: 72.0182 bits (175), Expect = 3.819e-14 Identity = 48/146 (32.88%), Postives = 71/146 (48.63%), Query Frame = 0 Query: 32 ISAIPHFYVSGYDEKPLE-----FEDIVDK--STYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLI---LPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 +SA+ V+ + P ++IVDK YD P GG V + I S+D I E +M Y ++F Q W+D RL LP N+T + R+ WL PD+YF N KK +T+ N + L+ D T+LY ++ Sbjct: 13 VSALAALCVACCAQSPSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYNDLPLNLTLDNRVADQLWL-----PDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLR 153
BLAST of GL12665 vs. SwissProt
Match: gi|209572895|sp|Q5RCC5.2|GBRA2_PONAB (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2; AltName: Full=GABA(A) receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 70.8626 bits (172), Expect = 1.208e-13 Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 0 Query: 50 FEDIVDK--STYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLIL--PDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 F I+D+ YD P G T V ++ + S + + M Y DVFF Q+WKD RL P N+ R L+ + IW PD++F N KK MT+PN + + D T+LY ++ Sbjct: 42 FTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASK----IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMR 159
BLAST of GL12665 vs. SwissProt
Match: gi|126302547|sp|P47869.2|GBRA2_HUMAN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2; AltName: Full=GABA(A) receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 70.4774 bits (171), Expect = 1.280e-13 Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 0 Query: 50 FEDIVDK--STYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLIL--PDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 F I+D+ YD P G T V ++ + S + + M Y DVFF Q+WKD RL P N+ R L+ + IW PD++F N KK MT+PN + + D T+LY ++ Sbjct: 42 FTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASK----IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMR 159
BLAST of GL12665 vs. SwissProt
Match: gi|120756|sp|P10063.1|GBRA2_BOVIN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2; AltName: Full=GABA(A) receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 70.4774 bits (171), Expect = 1.305e-13 Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 0 Query: 50 FEDIVDK--STYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLIL--PDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 F I+D+ YD P G T V ++ + S + + M Y DVFF Q+WKD RL P N+ R L+ + IW PD++F N KK MT+PN + + D T+LY ++ Sbjct: 42 FTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASK----IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMR 159
BLAST of GL12665 vs. SwissProt
Match: gi|120757|sp|P26048.1|GBRA2_MOUSE (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2; AltName: Full=GABA(A) receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 70.4774 bits (171), Expect = 1.423e-13 Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 0 Query: 50 FEDIVDK--STYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLIL--PDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 F I+D+ YD P G T V ++ + S + + M Y DVFF Q+WKD RL P N+ R L+ + IW PD++F N KK MT+PN + + D T+LY ++ Sbjct: 42 FTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASK----IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMR 159
BLAST of GL12665 vs. SwissProt
Match: gi|120763|sp|P28471.1|GBRA4_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4; AltName: Full=GABA(A) receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 70.0922 bits (170), Expect = 2.277e-13 Identity = 51/167 (30.54%), Postives = 72/167 (43.11%), Query Frame = 0 Query: 13 CSAENMRLKTKHGLEILCFISAIPHF-YVSGYDEK--PLEFEDIVDK--STYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHL-------IWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 CS ++ L L +LC + + + DEK P F I+D YD P GG T V + + S + + M Y DVFF Q W D RL P+E L L +W PD++F+N KK MT PN + ++ TILY ++ Sbjct: 13 CSGVSLAL-----LHVLCLATCLNESPGQNSKDEKLCPENFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDG---------PIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMR 165
BLAST of GL12665 vs. SwissProt
Match: gi|3023835|sp|Q90845.1|GBRA6_CHICK (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 69.3218 bits (168), Expect = 4.120e-13 Identity = 41/119 (34.45%), Postives = 57/119 (47.90%), Query Frame = 0 Query: 53 IVDK--STYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLIL--PDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 I+DK YD P GG T V + + S + + M Y DVFF Q W D RL P + R L+ + IW PD++F+N KK MT PN + ++ TILY ++ Sbjct: 35 ILDKLLDGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPTEILRLNNLM----VSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMR 149
BLAST of GL12665 vs. SwissProt
Match: gi|120764|sp|P19969.1|GBRA5_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-5; AltName: Full=GABA(A) receptor subunit alpha-5; Flags: Precursor) HSP 1 Score: 69.3218 bits (168), Expect = 4.319e-13 Identity = 41/111 (36.94%), Postives = 52/111 (46.85%), Query Frame = 0 Query: 59 YDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWL--HLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 YD P G T V + + S + + M Y DVFF Q WKD RL M R LP+ L IW PD++F N KK MT PN + L D T+LY ++ Sbjct: 60 YDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQR----LPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMR 166
BLAST of GL12665 vs. SwissProt
Match: gi|13959382|sp|Q9UN88.2|GBRT_HUMAN (RecName: Full=Gamma-aminobutyric acid receptor subunit theta; AltName: Full=GABA(A) receptor subunit theta; Flags: Precursor) HSP 1 Score: 69.3218 bits (168), Expect = 4.419e-13 Identity = 45/146 (30.82%), Postives = 69/146 (47.26%), Query Frame = 0 Query: 31 FISAIPHFYVSGYDEKPLEFEDIVDK------STYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPD---NMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 F SA+P ++ ++ K E +V K S YD P GG V + + S++ I E +M Y +FF Q WKD RL + N+T +YR+ +W PD YF N+K +T+ N L+ D T+ Y ++ Sbjct: 36 FSSAVPEVVLNLFNCKNCANEAVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNMDYTITMFFHQTWKDSRLAYYETTLNLTLDYRM-----HEKLWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGIR 176
BLAST of GL12665 vs. nr
Match: gi|1325329603|ref|XP_023346667.1| (glycine receptor subunit alpha-4-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 220.705 bits (561), Expect = 4.827e-66 Identity = 96/124 (77.42%), Postives = 112/124 (90.32%), Query Frame = 0 Query: 44 DEKPLEFEDIVDKSTYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 ++ PL+FEDIVD+ TYDKMRPPKPGG AT V FH+T+MS+D+IDE SMTYAAD+FF QEWKDHRL +PDN+TREY+LLP+EWL IWRPDSYFKNAK+VTFQTMTIPNHYVWLY++K I YMVK Sbjct: 43 NDLPLKFEDIVDRKTYDKMRPPKPGGKATKVGFHITVMSIDSIDESSMTYAADIFFGQEWKDHRLQIPDNITREYQLLPIEWLKEIWRPDSYFKNAKRVTFQTMTIPNHYVWLYRNKQIFYMVK 166
BLAST of GL12665 vs. nr
Match: gi|1325329605|ref|XP_023346668.1| (glycine receptor subunit alpha-4-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 220.32 bits (560), Expect = 6.790e-66 Identity = 96/124 (77.42%), Postives = 112/124 (90.32%), Query Frame = 0 Query: 44 DEKPLEFEDIVDKSTYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 ++ PL+FEDIVD+ TYDKMRPPKPGG AT V FH+T+MS+D+IDE SMTYAAD+FF QEWKDHRL +PDN+TREY+LLP+EWL IWRPDSYFKNAK+VTFQTMTIPNHYVWLY++K I YMVK Sbjct: 42 NDLPLKFEDIVDRKTYDKMRPPKPGGKATKVGFHITVMSIDSIDESSMTYAADIFFGQEWKDHRLQIPDNITREYQLLPIEWLKEIWRPDSYFKNAKRVTFQTMTIPNHYVWLYRNKQIFYMVK 165
BLAST of GL12665 vs. nr
Match: gi|1325329601|ref|XP_023346666.1| (glycine receptor subunit alpha-4-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 220.705 bits (561), Expect = 7.180e-66 Identity = 96/124 (77.42%), Postives = 112/124 (90.32%), Query Frame = 0 Query: 44 DEKPLEFEDIVDKSTYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 ++ PL+FEDIVD+ TYDKMRPPKPGG AT V FH+T+MS+D+IDE SMTYAAD+FF QEWKDHRL +PDN+TREY+LLP+EWL IWRPDSYFKNAK+VTFQTMTIPNHYVWLY++K I YMVK Sbjct: 61 NDLPLKFEDIVDRKTYDKMRPPKPGGKATKVGFHITVMSIDSIDESSMTYAADIFFGQEWKDHRLQIPDNITREYQLLPIEWLKEIWRPDSYFKNAKRVTFQTMTIPNHYVWLYRNKQIFYMVK 184
BLAST of GL12665 vs. nr
Match: gi|1325308472|ref|XP_023335853.1| (glycine receptor subunit alpha-4-like, partial [Eurytemora affinis]) HSP 1 Score: 209.534 bits (532), Expect = 2.334e-64 Identity = 93/123 (75.61%), Postives = 107/123 (86.99%), Query Frame = 0 Query: 45 EKPLEFEDIVDKSTYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 E+PL+F+DIVD+ YDKMRPPKPGG T V FHVT++SLD+I+EGSMTYAAD+FF Q W DHRL LP NMT+EYRLLPVEWL IWRPDS+FKNAK+VTFQ MTIPNHY+WLYK K I+YMVK Sbjct: 33 EEPLKFDDIVDRRFYDKMRPPKPGGNPTKVMFHVTVLSLDSINEGSMTYAADIFFGQSWNDHRLKLPANMTQEYRLLPVEWLQDIWRPDSFFKNAKQVTFQRMTIPNHYLWLYKSKQIMYMVK 155
BLAST of GL12665 vs. nr
Match: gi|1041541713|ref|XP_017300327.1| (PREDICTED: gamma-aminobutyric acid receptor subunit epsilon-like [Diaphorina citri]) HSP 1 Score: 194.126 bits (492), Expect = 3.336e-60 Identity = 94/124 (75.81%), Postives = 102/124 (82.26%), Query Frame = 0 Query: 48 LEFEDIV--DKSTYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVKYV 169 L F DI+ D YDKMRPPK G T V FHVT+M LD+IDE SMTYAAD+FFAQ WKDHRL LP+NMT EYRLL V+WL +WRPDS+FKNAK VTFQTMTIPNHYVWLYKDKTILYMVKYV Sbjct: 35 LTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKYV 158
BLAST of GL12665 vs. nr
Match: gi|985400371|ref|XP_015367853.1| (PREDICTED: glycine receptor subunit alpha-2-like [Diuraphis noxia]) HSP 1 Score: 199.904 bits (507), Expect = 1.374e-59 Identity = 98/135 (72.59%), Postives = 108/135 (80.00%), Query Frame = 0 Query: 35 IPHFYVSGYDEKPLEFEDIV--DKSTYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 I + YV Y K LEF DI+ D YDKMRPPK G AT V FHVT+M LD+IDE +MTYAAD+FFAQ WKDHRL LP+NMT EYRLL V+WL IWRPDS+FKNAK VTFQTMTIPNHY+WLYKDKTILYMVK Sbjct: 18 IIYLYVIKY-SKCLEFRDILPEDAKQYDKMRPPKIDGTATKVHFHVTVMGLDSIDENAMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNIWRPDSFFKNAKAVTFQTMTIPNHYMWLYKDKTILYMVK 151
BLAST of GL12665 vs. nr
Match: gi|969457769|ref|XP_015044861.1| (uncharacterized protein Dyak_GE29222, partial [Drosophila yakuba] >gi|948561870|gb|KRK05495.1| uncharacterized protein Dyak_GE29222, partial [Drosophila yakuba]) HSP 1 Score: 192.586 bits (488), Expect = 4.187e-59 Identity = 95/142 (66.90%), Postives = 107/142 (75.35%), Query Frame = 0 Query: 28 ILCFISAIPHFYVSGYDEKPLEFEDIV--DKSTYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 IL + YV G ++ L DI+ D YDKMRPPK G T V FHVT+M LD+IDE SMTY ADVFFAQ WKDHRL LP+NMT+EYRLL V+WL +WRPDS+FKNAK VTFQTMTIPNHY+WLYKDKTILYMVK Sbjct: 7 ILVICTICMKHYVKGEFQQSLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWKDHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVK 148
BLAST of GL12665 vs. nr
Match: gi|1229892791|ref|XP_022166878.1| (glycine receptor subunit alpha-2-like [Myzus persicae]) HSP 1 Score: 197.978 bits (502), Expect = 9.519e-59 Identity = 94/125 (75.20%), Postives = 103/125 (82.40%), Query Frame = 0 Query: 45 EKPLEFEDIV--DKSTYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 K LEF DI+ D YDKMRPPK G AT V FHVT+M LD+IDE +MTYAAD+FFAQ WKDHRL LP+NMT EYRLL V+WL IWRPDS+FKNAK VTFQTMTIPNHY+WLYKDKTILYMVK Sbjct: 31 SKCLEFRDILPEDAKQYDKMRPPKIDGTATKVHFHVTVMGLDSIDENAMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNIWRPDSFFKNAKAVTFQTMTIPNHYMWLYKDKTILYMVK 155
BLAST of GL12665 vs. nr
Match: gi|1059411408|ref|XP_017778609.1| (PREDICTED: glycine receptor subunit alpha-2 isoform X1 [Nicrophorus vespilloides]) HSP 1 Score: 196.823 bits (499), Expect = 2.184e-58 Identity = 104/164 (63.41%), Postives = 117/164 (71.34%), Query Frame = 0 Query: 12 TCSAENMR----LKTKHGLEILCFISAIPHFYVSGYDE--KPLEFEDIV--DKSTYDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 T S E +R KTKH +L A+ H Y + L +DI D S YDKMRPPK G T V FHVT+M LD+IDEGSMTYAAD+FFAQ WKDHRL LP+NMT EYRLL V+WL +WRPDS+FKNAK VTFQTMTIPNHY+WLYKDKTILYMVK Sbjct: 2 TSSNEGIRHTGLNKTKHCEFVLLLTLALIHI-AHAYQQFQTGLAIKDIFPEDPSQYDKMRPPKKDGNPTIVYFHVTVMGLDSIDEGSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKSMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVK 164
BLAST of GL12665 vs. nr
Match: gi|1325319053|ref|XP_023341297.1| (glycine receptor subunit alpha-4-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 198.749 bits (504), Expect = 4.560e-58 Identity = 99/144 (68.75%), Postives = 111/144 (77.08%), Query Frame = 0 Query: 27 EILCFISA-IPHFYVSGYDEKPLEFEDIVDKST--YDKMRPPKPGGGATHVSFHVTIMSLDTIDEGSMTYAADVFFAQEWKDHRLILPDNMTREYRLLPVEWLHLIWRPDSYFKNAKKVTFQTMTIPNHYVWLYKDKTILYMVK 167 +I C + A +V G D+ PLE DI+ + YDKMRPPK G AT V FHVT+MSLDTIDE SMTY D+FFAQ WKD RL LPDNMT EYRLLPVEWL IWRPDS+FKNAK VTFQTMTIPNHY+WLY+DK+ILYMVK Sbjct: 25 KIGCEVDAPAGQVFVHGKDD-PLELNDILPRHNKIYDKMRPPKREGNATKVFFHVTVMSLDTIDESSMTYTCDIFFAQSWKDFRLRLPDNMTSEYRLLPVEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLYQDKSILYMVK 167 The following BLAST results are available for this feature:
BLAST of GL12665 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 12
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BLAST of GL12665 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of GL12665 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1442_size41114:2982..9109+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1442_size41114-snap-gene-0.17 ID=maker-scaffold1442_size41114-snap-gene-0.17|Name=GL12665|organism=Tigriopus kingsejongensis|type=gene|length=6128bp|location=Sequence derived from alignment at scaffold1442_size41114:2982..9109+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'GL12665' has the following synonyms
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