hypothetical protein L798_13876, maker-scaffold186_size273091-snap-gene-1.41 (gene) Tigriopus kingsejongensis

Overview
Namehypothetical protein L798_13876
Unique Namemaker-scaffold186_size273091-snap-gene-1.41
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of hypothetical protein L798_13876 vs. L. salmonis genes
Match: EMLSAG00000012828 (supercontig:LSalAtl2s:LSalAtl2s979:4:5108:1 gene:EMLSAG00000012828 transcript:EMLSAT00000012828 description:"maker-LSalAtl2s979-augustus-gene-0.3")

HSP 1 Score: 60.4622 bits (145), Expect = 9.562e-12
Identity = 44/120 (36.67%), Postives = 58/120 (48.33%), Query Frame = 0 
Query:   45 IHSLTARSVPRQFREGLKKGMPFLADRNIKTATDPPRTPWDVTTGEGTQSSPPISAPSTSQPRGSKPTTPLHIIYDSENK-----DLVPYPEGEFIRSPSPEHSGIPALPVTMRLRSRDE 159
            IHSLTARSVPR FREGLKKG+    D+NIK           +   + T  S   +  ++ +          H+IYDS+ K             E  R+PSPEH GIPA  V +  + R +
Sbjct:  201 IHSLTARSVPRHFREGLKKGLTHFTDKNIK-----------IPGSDSTIHSR--NYGNSEEDYYDDDEESSHVIYDSKKKYQSSSVSSNNNTMESTRTPSPEHVGIPASRVRLTPKKRSD 307
The following BLAST results are available for this feature:
BLAST of hypothetical protein L798_13876 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000128289.562e-1236.67supercontig:LSalAtl2s:LSalAtl2s979:4:5108:1 gene:E... [more]
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BLAST of hypothetical protein L798_13876 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of hypothetical protein L798_13876 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold186_size273091supercontigscaffold186_size273091:184288..185101 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold186_size273091-snap-gene-1.41-mRNA-1maker-scaffold186_size273091-snap-gene-1.41-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold186_size273091:184288..185101-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold186_size273091-snap-gene-1.41 ID=maker-scaffold186_size273091-snap-gene-1.41|Name=hypothetical protein L798_13876|organism=Tigriopus kingsejongensis|type=gene|length=814bp|location=Sequence derived from alignment at scaffold186_size273091:184288..185101- (Tigriopus kingsejongensis)
ACGAACACCAGACATTTCGACTCAACGGTTGCTCTTCTCTTGTTTCCTTA
TGTGCATAGCTTTAGTTTTCATGAGATTTATGGCTCTACTTCCTTTGTCC
TATAGTCTTCCGTTTCGGGATTTGCCCAAGATGTGTGGAGTGACTCTGGC
CATCCATCGAGTGCTTTGATTTCCTCAGCTTTCTAGGGTGTGGATTGGTC
AAACAAACCCTACCTTATCAATGTCCCACGATTACCATCTAGTTATCAAT
CCCATACTATAGGGTTTGGCTCGGTCACAAAGGTCGGGGGTTCCTTCTGT
CCCGCTCCATTTCTGGCACCCGCACTTGTTAGTTACACTCTCTTGTGAAT
GTCGTCTGCGCACCTCCCGACTTTGGGCTGTTGGTCGTCGTTTCGGTGAA
CAGATGGGCGGCATGAATTGGGGATCACTTCTGCTCTTCCCTCGGTCACG
CACTTTTCCGTTATTTCAGATTCACTCCCTCACAGCCCGCAGCGTGCCTC
GGCAATTTCGGGAGGGGCTCAAGAAAGGCATGCCTTTCTTGGCCGACCGG
AACATTAAGACGGCCACGGATCCCCCTCGCACACCCTGGGATGTCACCAC
CGGGGAAGGGACCCAAAGCTCCCCACCCATCTCCGCCCCGAGCACTAGTC
AGCCTCGCGGCTCCAAGCCCACCACGCCACTCCACATAATCTATGACTCG
GAAAACAAGGACTTGGTGCCCTACCCGGAAGGCGAGTTCATTCGCAGTCC
CAGCCCGGAGCACTCGGGCATTCCAGCCCTCCCCGTCACCATGCGGCTGC
GCTCGAGGGACGAA
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Synonyms
The feature 'hypothetical protein L798_13876' has the following synonyms
Synonym
Tk00926
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