cleavage and polyadenylation specificity factor subunit 2, maker-scaffold281_size224178-snap-gene-1.30 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. L. salmonis genes
Match: EMLSAG00000011843 (supercontig:LSalAtl2s:LSalAtl2s831:281816:286361:1 gene:EMLSAG00000011843 transcript:EMLSAT00000011843 description:"snap_masked-LSalAtl2s831-processed-gene-2.5") HSP 1 Score: 971.459 bits (2510), Expect = 0.000e+0 Identity = 485/771 (62.91%), Postives = 591/771 (76.65%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMK---VNAPGKTQQKT-FFKAIKTKHMMFPFVDEK-IKWDDYGEIVKPEDWVDGTIDHEQPKADPYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDG-LLAWVDGRISFALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK PLSGG PHCYLLEVD + FL D GWD F+ + EIK V +KIDAVLLSYPD+ HLG LPY V LGLSC I+ATVP++KMGQMFMYD+Y+A+ EDF LFTLDEVD F+ ITQLKYNQT LKGKGEGI+ITPIPAGHMIGG+IWKIVK+GEEDI+YAVDFNHKKE+HLNG D++K+ RPS+ ITD FN QLRRR RDEK+MTNILQTLRNNGNVL+C DTAGRVLELAHM+D LWQ +DSGL+AYSLAL+NN S++V+EFAKSQIEWMS+KLM+ FEG+RNNPFQFKHLKLCHSM EVNKVPSPKVVLASM D+E G+SR+LF+ WC P+N+II+TSR+ TLA+DL+T G+ R + LEIKKR++LTG ELEE+ + EL K + ++ DESSD+EME G KHDIIMK +NA + KT FF+++K K +FP +EK I+WDDYGEIV+ EDW+D + Q + ++ + D+ +I EVPTKCV+S +KAQ+QFIDFEGRS+G+SI+K+LQQ+KPR++I+VRG ++C+ L N C+Q+ K QQ+++VY+P+NGE +D TTESFIYQV+L ESLV L +S GKDG LAWVDG I+ D+ ADI P D+ D+A EE KKP IP L P D H FVNELKLSDFK +LTK+GISSEF GGVLFCG+G VALRRHDSGR+TIEG++C +YYRVR+LLYEQYAIV Sbjct: 1 MTSIIKMCPLSGGRSEG------PHCYLLEVDDYNFLLDVGWDPFFNSKLKKEIKKVASKIDAVLLSYPDLDHLGALPYAVGKLGLSCSIFATVPVHKMGQMFMYDVYEAQRKQEDFDLFTLDEVDSAFDKITQLKYNQTFALKGKGEGISITPIPAGHMIGGTIWKIVKDGEEDIIYAVDFNHKKERHLNGCDLDKLLRPSILITDAFNIGCHQLRRRVRDEKIMTNILQTLRNNGNVLICTDTAGRVLELAHMVDQLWQNRDSGLLAYSLALVNNFSYSVVEFAKSQIEWMSEKLMKTFEGKRNNPFQFKHLKLCHSMNEVNKVPSPKVVLASMPDMESGYSRELFIQWCTNPKNSIILTSRSPANTLAYDLMTKGSGRTIELEIKKRVELTGTELEEYNKHRDELIVKKSLTSVLNGGDESSDDEMEISGK----KHDIIMKNDPMNANDVPKGKTGFFRSMKAKFPIFPTHEEKVIRWDDYGEIVRSEDWLDIS----QSTENSNVKQNNEIKDDRSNIQSEVPTKCVTSKHSFHIKAQIQFIDFEGRSEGDSILKLLQQIKPRKVIVVRGTPEKCDTLKNFCEQIALKG------DQQRIDVYSPENGEVLDVTTESFIYQVRLTESLVKSLEYSTGKDGSQLAWVDGVINLLTDDSADIIP-DEEDDAFEEPSLKKPRIPQLDSAPLDLQCNHQATFVNELKLSDFKAILTKNGISSEFQGGVLFCGDGFVALRRHDSGRITIEGSLCSEYYRVRELLYEQYAIV 750
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. L. salmonis genes
Match: EMLSAG00000000010 (supercontig:LSalAtl2s:LSalAtl2s1003:5798:7615:-1 gene:EMLSAG00000000010 transcript:EMLSAT00000000010 description:"augustus_masked-LSalAtl2s1003-processed-gene-0.0") HSP 1 Score: 132.109 bits (331), Expect = 2.225e-32 Identity = 115/467 (24.63%), Postives = 203/467 (43.47%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQF-------DMNIMNEIKA--VINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNME-DFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRV-----LNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKT 469 MT I+ PL G S C L+ + + DCG + D + + + + +DAV++S+ + H G LPY+ +G S PIY T P + + + D+ + + + FT + + + + + +Q I++ E + I AGH++G ++++ VK G IVY D+N ++HL + I+K RP L IT+ A+ + +R R+ + + + G VL+ V GR EL +++ W D + + ++ + K I W ++K+ + F R N F FK +K N P P VV A+ L G S +F WC N II+ GT+ H ++ NGT ++ +E+K ++ + +L S + +M+ E + +ME K +H + + A G+T Sbjct: 1 MTEEIRVTPLGAGQDVGRS------CLLVSIGGKNLMLDCGMHMGYNDERRFPDFSFIEDTPGAPLTPHLDAVIISHFHLDHCGALPYMTEMVGYSGPIYMTHPTKAIAPILLEDMRRVAVERKGESNFFTSAMIKECMKKVVAVHLHQVIRVD---ESLEIKAYYAGHVLGAAMFQ-VKVGNRSIVYTGDYNMTPDRHLGAAWIDKC-RPDLLITESTYATTVRDSKRCRERDFLKKVHDCVERGGKVLIPVFALGRAQELCILLETYW---DRMNLKVPIFFSTGLTEKATNYYKMFITWTNEKIRKTFVER--NMFDFKFIKPLDRAYIQN--PGPMVVFATPGMLHGGLSLAIFEEWCTNELNMIIMPGYCVAGTVGHKIL-NGTRKLEFSKGKTVEVKMSVQYMSFSAHADAKGIMQLISYCEPKNVMLVHGEQA--KMEFLKAKIESEHGVQCFMPANGET 446
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. L. salmonis genes
Match: EMLSAG00000007282 (supercontig:LSalAtl2s:LSalAtl2s409:129273:131364:-1 gene:EMLSAG00000007282 transcript:EMLSAT00000007282 description:"maker-LSalAtl2s409-augustus-gene-1.22") HSP 1 Score: 118.627 bits (296), Expect = 7.976e-28 Identity = 89/374 (23.80%), Postives = 171/374 (45.72%), Query Frame = 0 Query: 24 FRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFD----MNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLIT 393 FRPL G S C+LLE L DCG + ++ I+A ++ID +L+S+ + H G LP+ + ++ T + + + D + + L++ +++ + E I L +++ ++KG I AGH++G ++ I G + Y DF+ ++++HL + + +P + I + + +R DR+ + + + + G L+ V GR EL ++D W L + ++++ + ++ + M++++ R NNPF FKH+ + + V P V+LAS ++ G SR+LF +WC P+N I+ EGTLA +++ Sbjct: 13 FRPLGAGQEVGRS------CHLLEFKDKRILLDCGIHPGLSGMDALPFVDLIEA--DEIDLLLVSHFHLDHAGALPWFLEKTTFKGKVFMTHATKAIYRWLLSDYIKVSNISTEQMLYSEQDLEASMEKIQTLNFHEEKEVKG----IRFWAYNAGHVLGAXMFMIEIAGVRTL-YTGDFSREEDRHLMAXEXPSL-KPHVLILESTYGTNIHEKREDRESRFTSTVHDIVTRGGRCLIPVFALGRAQELLLILDEYWGAHPE-LHEIPIYYASSLAKKCMAVYQTFVNAMNERIRRQIS--VNNPFVFKHISNLKGIDHFDDV-GPCVILASPGMMQSGLSRELFESWCSDPKNGCIVAGYCVEGTLAKHILS 368 HSP 2 Score: 51.6026 bits (122), Expect = 7.880e-7 Identity = 32/114 (28.07%), Postives = 55/114 (48.25%), Query Frame = 0 Query: 516 PKADPYLRGHPNDADEGKDIVEVPTKCVS-SVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVD 628 PK + G+ + K I+ P + S + QK+PLK QV +I F +D + ++++KP +ILV G ++ + L + A E K++ Y P+N +VD Sbjct: 347 PKNGCIVAGYCVEGTLAKHILSEPEEVASMNGQKLPLKMQVNYISFSAHTDYKQTSGFIRELKPPHVILVHGEANEMSRLKS------ALIREYEADPSTKIDFYNPRNTVSVD 454
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|18202027|sp|O35218.1|CPSF2_MOUSE (RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit) HSP 1 Score: 813.527 bits (2100), Expect = 0.000e+0 Identity = 411/803 (51.18%), Postives = 556/803 (69.24%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAEL------EEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKADPYLRGHPNDADE-GKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISFALDEV------ADIQPRDDGD--EAMEEAPKKKPA------------------------IPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK LSG + A CYLL+VD+F FL DCGWD F ++I++ ++ +++IDAVLLS+PD HLG LP+ V LGL+C IYAT+P+YKMGQMFMYDLYQ+R+N EDF LFTLD+VD F+ I QLK++Q + LKGKG G++ITP+PAGHMIGG+IWKIVK+GEE+IVYAVDFNHK+E HLNG +E + RPSL ITD FNA+Y Q RR+ RDE+L+TN+L+TLR +GNVL+ VDTAGRVLELA ++D +W+ +D+GL YSLALLNN+S+NV+EF+KSQ+EWMSDKLMR FE +RNNPFQF+HL LCH ++++ +VPSPKVVLAS DLECGFSRDLF+ WC P+N+II+T RT GTLA LI N T +V +E++KR+KL G EL E+ +++ + +SK++++ D+ +E+++ KHD++MK +++ +FFK K + MFP +E+IKWD+YGEI+KPED++ + + + G N + +D+ +VPTKCVS+ + I +KA+V +ID+EGRSDG+SI K++ Q+KPR+LI+V G + +LA C+ K + VY PK ETVDAT+E+ IYQV+L +SLV L F K KD LAW+DG + + +V + + +DDG+ E +AP A IPTL PLP EV H +VF+NE +LSDFK VL + GI +EF GGVL C N VA+RR ++GR+ +EG +C D+YR+RDLLYEQYAIV Sbjct: 1 MTSIIKLTTLSG---VQEESAL---CYLLQVDEFRFLLDCGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELEEYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAH-KTKHDLMMKGEG---SRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGK----------DIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEETEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVC-NNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV 782
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|1706103|sp|Q10568.1|CPSF2_BOVIN (RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit) HSP 1 Score: 811.987 bits (2096), Expect = 0.000e+0 Identity = 408/803 (50.81%), Postives = 557/803 (69.36%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTG------AELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKADPYLRGHPN-DADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISFALDEV------ADIQPRDDGDEA--------------------------MEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK LSG + A CYLL+VD+F FL DCGWD F M+I++ ++ +++IDAVLLS+PD HLG LPY V LGL+C IYAT+P+YKMGQMFMYDLYQ+R+N EDF LFTLD+VD F+ I QLK++Q + LKGKG G++ITP+PAGHMIGG+IWKIVK+GEE+IVYAVDFNHK+E HLNG +E + RPSL ITD FNA+Y Q RR+ RDE+L+TN+L+TLR +GNVL+ VDTAGRVLELA ++D +W+ +D+GL YSLALLNN+S+NV+EF+KSQ+EWMSDKLMR FE +RNNPFQF+HL LCH ++++ +VPSPKVVLAS DLECGFSRDLF+ WC P+N+II+T RT GTLA LI N + +V +E++KR+KL G E E+ +++ + +SK++++ D+ ++E+++ KHD++MK +++ +FFK K + MFP +E+IKWD+YGEI+KPED++ + + + G N D +D+ +VPTKC+S+ + I +KA+V +ID+EGRSDG+SI K++ Q+KPR+LI+V G + +LA C+ K + VY PK ETVDAT+E+ IYQV+L +SLV L F K KD LAW+DG + + +V + + +DDG+++ +E ++ IPTL PLP EV H +VF+NE +LSDFK VL + GI +EF GGVL C N VA+RR ++GR+ +EG +C D+YR+RDLLYEQYAIV Sbjct: 1 MTSIIKLTTLSG---VQEESAL---CYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSSDESDAEEDIDQPSAH-KTKHDLMMKGEG---SRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGK----------DIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVC-NNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV 782
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|51338827|sp|Q9P2I0.2|CPSF2_HUMAN (RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit) HSP 1 Score: 811.216 bits (2094), Expect = 0.000e+0 Identity = 410/803 (51.06%), Postives = 556/803 (69.24%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTG------AELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKADPYLRGHPN-DADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISFALDEV------ADIQPRDDGD--EAMEEAP------------------------KKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK LSG + A CYLL+VD+F FL DCGWD F M+I++ ++ +++IDAVLLS+PD HLG LPY V LGL+C IYAT+P+YKMGQMFMYDLYQ+R+N EDF LFTLD+VD F+ I QLK++Q + LKGKG G++ITP+PAGHMIGG+IWKIVK+GEE+IVYAVDFNHK+E HLNG +E + RPSL ITD FNA+Y Q RR+ RDE+L+TN+L+TLR +GNVL+ VDTAGRVLELA ++D +W+ +D+GL YSLALLNN+S+NV+EF+KSQ+EWMSDKLMR FE +RNNPFQF+HL LCH ++++ +VPSPKVVLAS DLECGFSRDLF+ WC P+N+II+T RT GTLA LI N + ++ +E++KR+KL G E E+ +++ + +SK++++ D+ +E+++ KHD++MK +++ +FFK K + MFP +E+IKWD+YGEI+KPED++ + + + G N D +D+ +VPTKC+S+ + I +KA+V +ID+EGRSDG+SI K++ Q+KPR+LI+V G + +LA C+ K + VY PK ETVDAT+E+ IYQV+L +SLV L F K KD LAW+DG + + +V + + +DDG+ E EAP ++ IPTL PLP EV H +VF+NE +LSDFK VL + GI +EF GGVL C N VA+RR ++GR+ +EG +C D+YR+RDLLYEQYAIV Sbjct: 1 MTSIIKLTTLSG---VQEESAL---CYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSSDESDIEEDIDQPSAH-KTKHDLMMKGEG---SRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGK----------DIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVEAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVC-NNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV 782
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|18203548|sp|Q9V3D6.1|CPSF2_DROME (RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit) HSP 1 Score: 810.061 bits (2091), Expect = 0.000e+0 Identity = 410/783 (52.36%), Postives = 547/783 (69.86%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPS-PKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITN-GTNRVLNLEIKKRIKLTGAELEEHRRKERE-LASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDW--VDGT--------------IDHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISFALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L++D L DCGWD +FD N + E+K ++ +DAVLLS+PD HLG LPY+V LGL+CPIYAT+P++KMGQMFMYDLY + +NM DF LF+LD+VD FE ITQLKYNQT+ LK KG GI+ITP+ AGHMIGG+IWKIVK GEEDIVYA DFNHKKE+HL+G +++++QRPSL ITD +NA Y+Q RRR RDEKLMTNILQT+RNNGNVL+ VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NVIEFAKSQIEWMSDKL + FEG RNNPFQFKH++LCHS+A+V K+P+ PKVVLAS DLE GF+RDLF+ W N+II+T+RT GTLA +L+ N + + L++++R+ L GAELEE+ R + E L + ++ E S++++E G KHDI+++ P FFK+ K H+MFP+ +EK+K D+YGEI+ +D+ D T + E+P + + D ++E PTK +S + I + AQVQ IDFEGRSDGES++K+L Q++PRR+I++ G + +A HC+Q V+TP+ GE +D T+E IYQV+L E LV +L F KGKD +AWVDGR+ + + P D E ++A ++ TL L DDE+ H +V +NELKLSDFK L ++ I+SEF+GGVL+C NG +ALRR D+G+V +EG + ++YY++R+LLYEQYAIV Sbjct: 1 MTSIIKLHTISGAM-----DESPP-CYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRTSPGTLAMELVENCAPGKQIELDVRRRVDLEGAELEEYLRTQGEKLNPLIVKPDVEEESSSESEDDIEMSVITG--KHDIVVR---PEGRHHSGFFKSNKRHHVMFPYHEEKVKCDEYGEIINLDDYRIADATGYEFVPMEEQNKENVKKEEPGIGAEQQANGGIVDNDVQLLEKPTKLISQRKTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVARHCEQ------------NVGARVFTPQKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRVKAIE--APMDVTVE--QDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQTLMRNNINSEFSGGVLWCSNGTLALRRVDAGKVAMEGCLSEEYYKIRELLYEQYAIV 756
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|18203567|sp|Q9W799.1|CPSF2_XENLA (RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit) HSP 1 Score: 799.66 bits (2064), Expect = 0.000e+0 Identity = 412/805 (51.18%), Postives = 560/805 (69.57%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELAS------KSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKADPYLRGHPN-DADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISFALDEV------ADIQPRDDGDEAME----------------------------EAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK L G + A CYLL+VD+F FL DCGWD F M+I++ +K ++++DAVLLS+PD HLG LPY V LGL+C IYAT+P+YKMGQMFMYDLYQ+R+N EDF LF+LD+VD F+ I QLKYNQ + LKGKG G++ITP+PAGHMIGG+IWKIVK+GEE+IVYAVDFNHK+E HLNG +E I RPSL ITD FNA+Y Q RR+ RDE+L+TN+L+TLR +GNVL+ VDTAGRVLELA ++D +W+ +D+GL YSLALLNN+S+NV+EF+KSQ+EWMSDKLMR FE +RNNPFQF+HL LCH +++ +VPSPKVVLAS DLECGFSR+LF+ WC P+N++I+T RT GTLA LI + + R++++E++KR+KL G ELEE+ KE+ +SK++++ DD +E+++ T KHD++MK +++ +FFK K + MFP +++IKWD+YGEI+KPED++ + + + G N D +D+ +VPTKCVS+ + + +KA+V +ID+EGRSDG+SI K++ Q+KPR+LI+V G D +LA C+ K + VYTPK ETVDAT+E+ IYQV+L +SLV L F K KD LAW+DG + + +V + + +D+G E ME E ++ IPTL PLP +EV H +VF+NE +LSDFK VL + GI +EF GGVL C N VA+RR ++GR+ +EG +C+D++++R+LLYEQYAIV Sbjct: 1 MTSIIKLTTLVGA---QEESAV---CYLLQVDEFRFLLDCGWDENFSMDIIDSVKKYVHQVDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFSLFSLDDVDCAFDKIQQLKYNQIVHLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMINRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLTLCHGYSDLARVPSPKVVLASQPDLECGFSRELFIQWCQDPKNSVILTYRTTPGTLARFLIDHPSERIIDIELRKRVKLEGKELEEYVEKEKLKKEAAKKLEQSKEADLDSSDDSDVEEDIDQI-TSHKAKHDLMMKNEG---SRKGSFFKQAKKSYPMFPAPEDRIKWDEYGEIIKPEDFLVPELQVTEDEKTKLESGLTNGDEPMDQDLSDVPTKCVSTTESMEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPDATQDLAEACRAFGGK----------DIKVYTPKLHETVDATSETHIYQVRLKDSLVSSLKFCKAKDTELAWIDGVLDMRVSKVDTGVILEERELKDEG-EDMEMQVDTQVMDASTIAQQKVIKSLFGDDDKEFSEESEIIPTLEPLPSNEVPGHQSVFMNEPRLSDFKQVLLREGIHAEFVGGVLVC-NNMVAVRRTETGRIGLEGCLCEDFFKIRELLYEQYAIV 783
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|229553940|sp|A8XUS3.2|CPSF2_CAEBR (RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit) HSP 1 Score: 547.74 bits (1410), Expect = 0.000e+0 Identity = 317/832 (38.10%), Postives = 468/832 (56.25%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMR-NFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTL----------AHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGT---KGPI----------KHDII------MKVNAPGKTQQK-TFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDW-VDGTIDHEQPK-----------ADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDG-LLAWVDGRI---------------------SFALDEV----ADIQPRD--DGDEAMEEAPKKKPA------------------IP-----------TLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVAL 749 MTSIIK + SG P CYLL+VD L DCGWD +F++ E++ I KI AVL+S+PD HLGGLPY+V+ GL+ P+Y TVP+YKMGQMF+YDL + ++E+F+ ++LD+VD FE + Q+KYNQT+ LKG G+ T +PAGHMIGGS+W+I + EDI+Y VDFNH+K++HL+G + RP L IT + S Q++R+DRDE+L+T IL+T+R G+ ++ +DTAGRVLELA+++D LW QD+GL Y+L ++++++ +V++FAKSQ+EWM +KL R + R NPF K++ L HS E+ K+ SPKVVL S D+E GFSR+LFL+WC +N +I+T+R TL A+D + ++ L+L ++KR+ L G EL E++R++ E ++ + M ++ E + PI D I + A QQK +FFK+ K M+P+++EK+KWDDYGE++KPED+ V ID + K D +PND DE E+PTKCV +I + +V+FI++EG SDGES K+L + PR++I+V G D +L + +G + ++N TP E +DA+ ESFIYQV L ++L+ ++ F + +G LAW+D RI S D V D+ P + D+ +EA ++ A IP L PLP ++ H +FVN+ KLS+FK +L G +EF G L G ++ Sbjct: 1 MTSIIKLKVFSGAKDEG------PLCYLLQVDNDYILLDCGWDERFELKYFEELRPYIPKISAVLISHPDPLHLGGLPYLVAKCGLTAPVYCTVPVYKMGQMFIYDLVYSHLDVEEFQHYSLDDVDMAFEKVEQVKYNQTVVLKGDS-GVNFTAMPAGHMIGGSMWRICRITGEDIIYCVDFNHRKDRHLSGCSFDNFNRPHLLITGAHHISLPQMKRKDRDEQLVTKILRTVRQKGDCMIVIDTAGRVLELAYLLDQLWANQDAGLSTYNLVMMSHVASSVVQFAKSQLEWMDEKLFRYDSSSARYNPFTLKNVNLVHSHLELIKIRSPKVVLCSSQDMETGFSRELFLDWCADQRNGVILTARPASFTLAARLVELAERANDGVLRNEDKHLSLLVRKRVPLEGEELLEYKRRKAERDAEETRIRMERARRQAQANESDDSDDDDIAAPIVPRLSEKDHRSFDAIENDSHCFDIMAKWDNQQKASFFKSTKKSFPMYPYIEEKVKWDDYGEVIKPEDYTVISKIDMRKGKNKDEPVVVHKREDEEEVYNPNDHDE-----EMPTKCVEFRNRIEISCRVEFIEYEGISDGESTKKMLAGLMPRQIIIVHGSRDDTRDLYAY--------FTDNGFKKDQLN--TPVANELIDASVESFIYQVSLSDALLAEIQFKEVSEGNSLAWIDARIQEKESIDNMLVAGASQLTIEDSLQEDAVEVVEEDVIPMETFQDDQNKQEASEENVAEGEKSNGQSKENDENASSIPIETQPKIRGTLILTPLPKKQIPVHQAIFVNDPKLSEFKNLLVDKGYKAEFFSGTLLINGGKCSI 810
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|18201967|sp|O17403.1|CPSF2_CAEEL (RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit) HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0 Identity = 292/695 (42.01%), Postives = 419/695 (60.29%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMR-NFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNG----------TNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMET-----------------------GGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDW-VDGTIDHE--QPKADPYLRG---------HPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDG-LLAWVDGRI 665 MTSIIK + SG P CYLL+VD L DCGWD +F + E+K I KI AVL+S+PD HLGGLPY+VS GL+ P+YATVP+YKMGQMF+YD+ + ++E+F+ +TLD+VD FE + Q+KYNQT+ LKG G+ T +PAGHM+GGSIW+I + EDIVY VDFNHKKE+HLNG + RP L IT + S Q+RR+DRDE+L+T IL+T+R G+ ++ +DTAGRVLELAH++D LW D+GL Y+L ++++++ +V++FAKSQ+EWM++KL + + R NPF KH+ LCHS E+ +V SPKVVL S D+E GFSR+LFL+WC P+N +I+T+R TLA L+ +R+++L +KKR+ L G EL E++R++ E ++ + M ++ E + G DI+ K + Q+ +FFK K MFP+++EK+KWDDYGE++KPED+ V ID Q K +P + +PND E E+PTKCV ++ + +++FI++EG SDGES K+L + PR++I+V G D +L + SG + P+ G VDA+ ESFIYQV L ++L+ + F + +G LAW+D R+ Sbjct: 1 MTSIIKLKVFSGAKDEG------PLCYLLQVDGDYILLDCGWDERFGLQYFEELKPFIPKISAVLISHPDPLHLGGLPYLVSKCGLTAPVYATVPVYKMGQMFIYDMVYSHLDVEEFEHYTLDDVDTAFEKVEQVKYNQTVVLKGDS-GVHFTALPAGHMLGGSIWRICRVTGEDIVYCVDFNHKKERHLNGCSFDNFNRPHLLITGAHHISLPQMRRKDRDEQLVTKILRTVRQKGDCMIVIDTAGRVLELAHLLDQLWSNADAGLSTYNLVMMSHVASSVVQFAKSQLEWMNEKLFKYDSSSARYNPFTLKHVTLCHSHQELMRVRSPKVVLCSSQDMESGFSRELFLDWCSDPRNGVILTARPASFTLAAKLVNMAERANDGVLKHEDRLISLVVKKRVALEGEELLEYKRRKAERDAEETRLRMERARRQAQANESDDSDDDDIAAPIVPRHSEKDFRSFDGSENDAHTFDIMAKWD---NQQKASFFKTTKKSFPMFPYIEEKVKWDDYGEVIKPEDYTVISKIDLRKGQNKDEPVVVKKREEEEEVYNPNDHVE-----EMPTKCVEFKNRVEVSCRIEFIEYEGISDGESTKKLLAGLLPRQIIVVHGSRDDTRDLVAY--------FADSGFDTTMLK--APEAGALVDASVESFIYQVALSDALLADIQFKEVSEGNSLAWIDARV 670 HSP 2 Score: 82.8037 bits (203), Expect = 5.550e-15 Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 0 Query: 698 LLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 L PLP + H VFVN+ KLSDFK +LT G +EF G L GN ++RR+D+G +EG DYY++R L Y+Q+A++ Sbjct: 760 LDPLPKRLIPIHQAVFVNDPKLSDFKNLLTDKGYKAEFLSGTLLINGGNCSIRRNDTGVFQMEGAFTKDYYKLRRLFYDQFAVL 843
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|18203240|sp|Q9LKF9.2|CPSF2_ARATH (RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=AtCPSF100; Short=CPSF 100 kDa subunit; AltName: Full=Protein EMBRYO DEFECTIVE 1265; AltName: Full=Protein ENHANCED SILENCING PHENOTYPE 5) HSP 1 Score: 486.493 bits (1251), Expect = 1.573e-160 Identity = 278/772 (36.01%), Postives = 425/772 (55.05%), Query Frame = 0 Query: 41 PHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASY-RQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEV-NKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAEL----EEHRRKERELA-----SKSKQSEMMMEDDESSDEEM--------ETGGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWV--DGTIDHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISFALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFA-GGVLFCGN-------GNVALRRHDSG--RVTIEGTVCDDYYRVRDLLYEQYAIV 781 P YL+ +D F FL DCGW+ FD +++ + V + IDAVLLS+PD H+G LPY + LGLS P+YAT P++++G + MYD + +R + DF LFTLD++D F+ + +L Y+Q L GKGEGI I P AGHM+GGSIW+I K+G ED++YAVD+NH+KE+HLNG+ ++ RP++ ITD ++A Y Q R+ RD++ + I + L GNVL+ VDTAGRVLEL +++ W + ++ + L +S + I++ KS +EWMSD + ++FE R+N F +H+ L + ++ N P PKVVLASM LE GF+R++F+ W P+N ++ T GTLA L + + + + + KR+ L G EL EE R +RE A K ++++ D++S E M + G+ GP DI++ P + MFP+ D +WDD+GEI+ P+D+V D +D + G ++A + P+K +S+ + + + +D+EGRSDG SI ++ V P +L+LV + +L HC +VY P+ ETVD T++ Y+V+L E L+ ++F K D +AWVD E K + + +LLP+P H V V +LK++DFK L+ G+ EFA GG L CG G + SG ++ IEG +C+DYY++RD LY Q+ ++ Sbjct: 18 PLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLLSHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDG-EDVIYAVDYNHRKERHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTAGRVLELLLILEQHWSQRG---FSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAFLLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFGTLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASHGSDDNSSEPMIIDTKTTHDVIGSHGPAYKDILIDGFVPPSSSVAP----------MFPYYDNTSEWDDFGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCSLVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICP------------HVYAPQIEETVDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVD-----------------------SEVGKTERDMRSLLPMP-GAASPHKPVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIEGPLCEDYYKIRDYLYSQFYLL 739
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|75253249|sp|Q652P4.1|CPSF2_ORYSJ (RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit) HSP 1 Score: 476.863 bits (1226), Expect = 8.221e-157 Identity = 281/802 (35.04%), Postives = 433/802 (53.99%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKV-PSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAEL----EEHRRKERE----------------LASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKADPYLRGHPNDA-----DEGKD---IVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISFALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRR-HDSG--------RVTIEGTVCDDYYRVRDLLYEQYAIV 781 M + ++ PLSG P CYLL VD F FL DCGW D + + + V IDAVLLS+ D HLG LPY + LGLS P+YAT P++++G + +YD + +R + DF LFTLD++D F+ + +LKY+Q L KGEGI I P AGH +GG++WKI K+G ED+VYAVDFNH+KE+HLNG+ + RP++ ITD +NA + +R +D+ + +++ L G+VL+ +DTAGRVLE+ +++ W + + Y + L N+S + +++ KS +EWM+D + ++FE R+N F K + + E+ K+ +PKVVLASM LE GFS D+F++ + +N ++ T + GTLA L + + + + + KRI L G EL EE R ++E L S +K S+ M+ D S+ + G+K DI++ P + MFPF + +WDD+GE++ PED++ +Q + D L D DEG + P+K +S+ + +K + ++DFEGRSDG S+ V+ V P +L+LV G + +L HC + ++VY P+ ET+D T++ Y+V+L E L+ ++ K + +AWVD + D++ TLLP P AH +V V +LKL+DFK L G+ EFAGG L CG + LR+ D+G ++ IEG +C+DYY++R+LLY Q+ ++ Sbjct: 1 MGTSVQVTPLSGAYGEG------PLCYLLAVDGFRFLLDCGWTDLCDPSHLQPLAKVAPTIDAVLLSHADTMHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYFISRRQVSDFDLFTLDDIDAAFQNVVRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDG-EDVVYAVDFNHRKERHLNGTALGSFVRPAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTAGRVLEILLILEQYWAQRH---LIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFLLKCVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGTLARMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKKEEALKASLNKEEEKKASLGSNAKASDPMVI-DASTSRKPSNAGSKFGGNVDILIDGFVPPSSSVAP----------MFPFFENTSEWDDFGEVINPEDYL-----MKQEEMDNTLMPGAGDGMDSMLDEGSARLLLDSTPSKVISNEMTVQVKCSLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCSK------------NSDLHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKTDDKL------------------------TLLP-PSSTPAAHKSVLVGDLKLADFKQFLANKGLQVEFAGGALRCGE-YITLRKIGDAGQKGSTGSQQIVIEGPLCEDYYKIRELLYSQFYLL 738
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|74858209|sp|Q55BS1.1|CPSF2_DICDI (RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit) HSP 1 Score: 439.499 bits (1129), Expect = 7.859e-142 Identity = 284/819 (34.68%), Postives = 430/819 (52.50%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTF--EMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEK-IQRPSLFITD--GFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVP-SPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLIT-----NGTNRVLNLEIKKRIKLTGAELEEH------RRKERELASKSKQSEMMMEDDESSDEEMETGGT------------------KGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHM--MFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKADPYLRGHPNDADE------GKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISF-------ALDEVAD--IQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGR---VTIEGTVCDDYYRVRDLLYEQYAIV 781 M SIIKF LSG D PP CYLLE+D F L DCG D +++ ++ V KIDAVLLS+ D H+GGLPYVV GL+ IY T P+ KMG MF+YDLY+ + + E+F+ ++LD +D F + +L ++Q L GKG+GI+ITP AGH IG S+WKI K G IVYA+D+NH+ E HL+ + I +PSL ITD G + + + RD+ L I + LR+ GNVL+ VDTAGRVLEL I++ W ++ L YS+ L SF+V +FA+SQ+E+MS FE NPF FKH+K+ S+ E+ ++P + KV+L S DLE GFSR+LF+ WC P+ I+ T + + +LA LI NG + + + R+ LTG EL ++ +R+E+ L K+ E E + +EE E +G I ++ N + K + M MFP+ ++ +KW +YGE ED D LR +E E+P K ++ ++P+ ++Q ID+EG SDG SI ++QQ+ P +L+L+RG E Q ++ N+ K+ + + G +Y P GE +D T+++ +Y++ L +SLV L SK D ++++ G++ LD + I ++ + T++ + H F+ ++KLSD K VL +GI +F G+L CG R D G + ++G + D+YY +++LLY+Q+ IV Sbjct: 1 MASIIKFTALSGA-----KDESPP-CYLLEIDDFCILLDCGLSYNLDFSLLEPLEKVAKKIDAVLLSHSDTTHIGGLPYVVGKYGLTGTIYGTTPVLKMGTMFLYDLYENKMSQEEFQQYSLDNIDSCFGEDRFKELSFSQHYSLSGKGKGISITPYLAGHTIGASVWKITK-GTYSIVYAIDYNHRNEGHLDSLQLTSDILKPSLLITDSKGVDKTLAFKKTITRDQSLFEQINRNLRDGGNVLIPVDTAGRVLELLLCIENYWS-KNKSLALYSVVFLGRFSFSVCQFARSQLEFMSSTASVKFEQNIENPFSFKHIKILSSLEELQELPDTNKVILTSSQDLETGFSRELFIQWCSDPKTLILFTQKIPKDSLADKLIKQYSTPNGRGKCIEIVQGSRVPLTGDELLQYEMEQAKQREEKRLEQLRKEQEEREERERLEEEEREQLLNATNQDQLQQLLQLQQQKERGIIDDSMVHMKNPFENDRFDLLDSEFKKQSMITMFPYFEKHLKWGEYGE----ED------------DDLILRNQDKKVEEVTMEEDEIQEQEIPKKIITQTLRLPINCKIQTIDYEGCSDGRSIKAIIQQIAPTKLVLIRGSEQQSQSIENYVKE----NIRTKG-------IYIPSIGEQLDLTSDTNVYELLLKDSLVNTLKTSKILDYEVSYIQGKVDILDGSNVPVLDLIQSIPINNNNNNNNNNNNNNNNNNNNTTMMTTTTTTTNGHDESFIGDIKLSDLKQVLVNAGIQVQFDQGILNCGGLVYIWRDEDHGGNSIINVDGIISDEYYLIKELLYKQFQIV 784
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|1339093196|ref|XP_023707824.1| (probable cleavage and polyadenylation specificity factor subunit 2 isoform X2 [Cryptotermes secundus]) HSP 1 Score: 916.761 bits (2368), Expect = 0.000e+0 Identity = 456/771 (59.14%), Postives = 579/771 (75.10%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDW--VDGTIDHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISFALDEVADIQP----RDDGDEAMEEAPKKK-PAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD F L DCGWD FD + M E++ I++IDAVLLSYPD HLG LPY+V GL+C IYAT+P+YKMGQMFMYDLYQ+R+NME+F+LFTLD+VD F+ I QLKYNQ++ +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDIVYAVDFNHKKE+HLNGS++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR+NGNVL+ VDTAGRVLELAHM+D LW+ +DSGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR FEG RNNPFQFKHL+LCHS+AE+++VPSPKVVLAS D+ECGFSR+LFL W P N+IIIT+RT GTLA LI NG N LNLEI++R++L GAELEE++RKERE KS++ ++ + S++EM++ + KHD+++K +T FFK+ K ++ MFPF +EK+K+D+YGEI++PED+ VD + E K + L+ A DI EVPTKC+S + + + AQVQ+IDFEGRSDGES+ K+L+Q+ PRRLILVRG D + + NHC+Q W V V+ P GE VDATTE++IYQV+L ++LV L KGK+ LAW+D +I D D +P DD D+ EE K + I TL PLP ++V H T F+NELKLSDF+ VL K+ I SEF+GGVL+C NG +ALRRH++GRV +EG + +DYYRVR+LLY+QYAIV Sbjct: 1 MTSIIKLHAISGAM-----DESPP-CYILQVDDFRILLDCGWDENFDQDFMKELRRYIHQIDAVLLSYPDPLHLGALPYLVGKCGLNCSIYATIPVYKMGQMFMYDLYQSRHNMEEFELFTLDDVDAAFDKIIQLKYNQSVPMKGKGYGLTVTPLPAGHMIGGTIWKIVKVGEEDIVYAVDFNHKKERHLNGSELERLQRPSLVITDAFNATYKQTRRRARDEKLMTNILQTLRSNGNVLITVDTAGRVLELAHMLDQLWRNKDSGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRTFEGARNNPFQFKHLQLCHSIAELSRVPSPKVVLASTPDMECGFSRELFLQWSSNPHNSIIITNRTSPGTLARQLIENGGNVPLNLEIRRRVRLEGAELEEYQRKERENKEKSQEKNEDLDMSDESEDEMDSLSSVAKGKHDLLVKAETKVQT---GFFKSNKKQYPMFPFFEEKVKFDEYGEIIRPEDYKMVDSNPEAEDNKENVDLKEEEITA----DITEVPTKCISVTKTVRVMAQVQYIDFEGRSDGESLQKILEQLHPRRLILVRGTPDSTHAMLNHCRQ-W-----------NGVRVFAPSRGEVVDATTETYIYQVRLTDALVSALELKKGKEAELAWLDAQI-VVRDMSKDAKPVTMDVDDIDKEEEEKGKMEIDQIYTLEPLPLNQVVGHQTAFINELKLSDFRQVLNKNSIPSEFSGGVLWCCNGTIALRRHEAGRVILEGCLSEDYYRVRELLYDQYAIV 745
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|1339093190|ref|XP_023707821.1| (probable cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Cryptotermes secundus] >gi|1339093192|ref|XP_023707822.1| probable cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Cryptotermes secundus] >gi|1339093194|ref|XP_023707823.1| probable cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Cryptotermes secundus] >gi|1330914194|gb|PNF33368.1| putative cleavage and polyadenylation specificity factor subunit 2 [Cryptotermes secundus] >gi|1330914196|gb|PNF33370.1| putative cleavage and polyadenylation specificity factor subunit 2 [Cryptotermes secundus]) HSP 1 Score: 916.761 bits (2368), Expect = 0.000e+0 Identity = 456/771 (59.14%), Postives = 579/771 (75.10%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDW--VDGTIDHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISFALDEVADIQP----RDDGDEAMEEAPKKK-PAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD F L DCGWD FD + M E++ I++IDAVLLSYPD HLG LPY+V GL+C IYAT+P+YKMGQMFMYDLYQ+R+NME+F+LFTLD+VD F+ I QLKYNQ++ +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDIVYAVDFNHKKE+HLNGS++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR+NGNVL+ VDTAGRVLELAHM+D LW+ +DSGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR FEG RNNPFQFKHL+LCHS+AE+++VPSPKVVLAS D+ECGFSR+LFL W P N+IIIT+RT GTLA LI NG N LNLEI++R++L GAELEE++RKERE KS++ ++ + S++EM++ + KHD+++K +T FFK+ K ++ MFPF +EK+K+D+YGEI++PED+ VD + E K + L+ A DI EVPTKC+S + + + AQVQ+IDFEGRSDGES+ K+L+Q+ PRRLILVRG D + + NHC+Q W V V+ P GE VDATTE++IYQV+L ++LV L KGK+ LAW+D +I D D +P DD D+ EE K + I TL PLP ++V H T F+NELKLSDF+ VL K+ I SEF+GGVL+C NG +ALRRH++GRV +EG + +DYYRVR+LLY+QYAIV Sbjct: 1 MTSIIKLHAISGAM-----DESPP-CYILQVDDFRILLDCGWDENFDQDFMKELRRYIHQIDAVLLSYPDPLHLGALPYLVGKCGLNCSIYATIPVYKMGQMFMYDLYQSRHNMEEFELFTLDDVDAAFDKIIQLKYNQSVPMKGKGYGLTVTPLPAGHMIGGTIWKIVKVGEEDIVYAVDFNHKKERHLNGSELERLQRPSLVITDAFNATYKQTRRRARDEKLMTNILQTLRSNGNVLITVDTAGRVLELAHMLDQLWRNKDSGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRTFEGARNNPFQFKHLQLCHSIAELSRVPSPKVVLASTPDMECGFSRELFLQWSSNPHNSIIITNRTSPGTLARQLIENGGNVPLNLEIRRRVRLEGAELEEYQRKERENKEKSQEKNEDLDMSDESEDEMDSLSSVAKGKHDLLVKAETKVQT---GFFKSNKKQYPMFPFFEEKVKFDEYGEIIRPEDYKMVDSNPEAEDNKENVDLKEEEITA---ADITEVPTKCISVTKTVRVMAQVQYIDFEGRSDGESLQKILEQLHPRRLILVRGTPDSTHAMLNHCRQ-W-----------NGVRVFAPSRGEVVDATTETYIYQVRLTDALVSALELKKGKEAELAWLDAQI-VVRDMSKDAKPVTMDVDDIDKEEEEKGKMEIDQIYTLEPLPLNQVVGHQTAFINELKLSDFRQVLNKNSIPSEFSGGVLWCCNGTIALRRHEAGRVILEGCLSEDYYRVRELLYDQYAIV 746
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|1227967677|ref|XP_021915178.1| (probable cleavage and polyadenylation specificity factor subunit 2 isoform X2 [Zootermopsis nevadensis] >gi|1227967679|ref|XP_021915179.1| probable cleavage and polyadenylation specificity factor subunit 2 isoform X2 [Zootermopsis nevadensis] >gi|646719772|gb|KDR21766.1| putative cleavage and polyadenylation specificity factor subunit 2 [Zootermopsis nevadensis]) HSP 1 Score: 909.057 bits (2348), Expect = 0.000e+0 Identity = 456/769 (59.30%), Postives = 572/769 (74.38%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDW--VDGTIDHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISFALDEVADIQPRDDG---DEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD F L DCGWD FD M E++ I++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYDLYQ+R+NMEDF LFTLD+VD F+ I QLKYNQ++ +KGKG G+ ITP+PAGHMIGG+IWKIVK GEEDIVYAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLRNNGNVLV VDTAGRVLELAHM+D LW+ +DSGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR FEG RNNPFQFKHL+LCHSMAE+++VPSPKVVLAS D+ECGFSR+LFL W N+IIIT+RT GTLA +LI NG LNLEI++R++L GAELEE++RKERE K++ ++ + S++EM++ KHD+++K +T FFK+ K ++ MFPF +EK+K+D+YGEI++PED+ VD + E K + L+ + DI+EVPTKC+S ++ + + AQVQ+IDFEGRSDGES+ K+L Q++PRRLILVRG + + + N C+Q W+ A V+ P GE VDATTE+ IYQV+L ++LV L KGK+ LAW+D +I D D +P G D EE + I TL PLP ++V H T F+NELKLSDFK VL K+ I SEF+GGVL+C NG VA+RRH++GRV +EG + DDYYRVR+LLYEQYAIV Sbjct: 1 MTSIIKLHAISGAM-----DESPP-CYILQVDDFRILLDCGWDENFDQEFMKELRRFIHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDLYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSVPMKGKGYGLTITPLPAGHMIGGTIWKIVKVGEEDIVYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRNNGNVLVTVDTAGRVLELAHMLDQLWRNKDSGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRTFEGARNNPFQFKHLQLCHSMAELSRVPSPKVVLASTPDMECGFSRELFLQWSLNSHNSIIITNRTSPGTLARELIENGGKLALNLEIRRRVRLEGAELEEYQRKERENKEKNQDKNEDVDMSDESEDEMDSLSAVAKGKHDLLVKTETKVQT---GFFKSNKKQYPMFPFFEEKVKFDEYGEIIRPEDYKMVDSNPETEDNKENVDLK---EEEVTTIDIMEVPTKCISVMKTVRVMAQVQYIDFEGRSDGESLQKILGQLRPRRLILVRGTPESTHAMLNLCRQ-WSGA-----------RVFAPSRGEIVDATTETHIYQVRLTDALVSALELKKGKEAELAWLDAQI-MVRDMSKDAKPVIMGVDDDGKDEEDKMEIDKIYTLEPLPLNQVAGHQTAFINELKLSDFKQVLNKNNIPSEFSGGVLWCCNGTVAVRRHEAGRVILEGCLSDDYYRVRELLYEQYAIV 744
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|1227967675|ref|XP_021915177.1| (probable cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Zootermopsis nevadensis]) HSP 1 Score: 907.516 bits (2344), Expect = 0.000e+0 Identity = 456/770 (59.22%), Postives = 572/770 (74.29%), Query Frame = 0 Query: 17 AMTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDW--VDGTIDHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDGLLAWVDGRISFALDEVADIQPRDDG---DEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD F L DCGWD FD M E++ I++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYDLYQ+R+NMEDF LFTLD+VD F+ I QLKYNQ++ +KGKG G+ ITP+PAGHMIGG+IWKIVK GEEDIVYAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLRNNGNVLV VDTAGRVLELAHM+D LW+ +DSGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR FEG RNNPFQFKHL+LCHSMAE+++VPSPKVVLAS D+ECGFSR+LFL W N+IIIT+RT GTLA +LI NG LNLEI++R++L GAELEE++RKERE K++ ++ + S++EM++ KHD+++K +T FFK+ K ++ MFPF +EK+K+D+YGEI++PED+ VD + E K + L+ + DI+EVPTKC+S ++ + + AQVQ+IDFEGRSDGES+ K+L Q++PRRLILVRG + + + N C+Q W+ A V+ P GE VDATTE+ IYQV+L ++LV L KGK+ LAW+D +I D D +P G D EE + I TL PLP ++V H T F+NELKLSDFK VL K+ I SEF+GGVL+C NG VA+RRH++GRV +EG + DDYYRVR+LLYEQYAIV Sbjct: 29 TMTSIIKLHAISGAM-----DESPP-CYILQVDDFRILLDCGWDENFDQEFMKELRRFIHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDLYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSVPMKGKGYGLTITPLPAGHMIGGTIWKIVKVGEEDIVYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRNNGNVLVTVDTAGRVLELAHMLDQLWRNKDSGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRTFEGARNNPFQFKHLQLCHSMAELSRVPSPKVVLASTPDMECGFSRELFLQWSLNSHNSIIITNRTSPGTLARELIENGGKLALNLEIRRRVRLEGAELEEYQRKERENKEKNQDKNEDVDMSDESEDEMDSLSAVAKGKHDLLVKTETKVQT---GFFKSNKKQYPMFPFFEEKVKFDEYGEIIRPEDYKMVDSNPETEDNKENVDLK---EEEVTTIDIMEVPTKCISVMKTVRVMAQVQYIDFEGRSDGESLQKILGQLRPRRLILVRGTPESTHAMLNLCRQ-WSGA-----------RVFAPSRGEIVDATTETHIYQVRLTDALVSALELKKGKEAELAWLDAQI-MVRDMSKDAKPVIMGVDDDGKDEEDKMEIDKIYTLEPLPLNQVAGHQTAFINELKLSDFKQVLNKNNIPSEFSGGVLWCCNGTVAVRRHEAGRVILEGCLSDDYYRVRELLYEQYAIV 773
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|1227099329|gb|OXU23263.1| (hypothetical protein TSAR_017013 [Trichomalopsis sarcophagae]) HSP 1 Score: 903.664 bits (2334), Expect = 0.000e+0 Identity = 450/769 (58.52%), Postives = 574/769 (74.64%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKV-NAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTI--DHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRISFALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD +FD + + E+K +++IDAVLLSYPD HLG LPY+V GLSCPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLM++FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSRDLFL WC PQN+IIITSRT GTLA DL+ NG NR + LEIKK+++L GAELEE+ +KE+ + KQ +M D S S++E+E GG KG KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI+KPED+ + + E K + ++ + + ++PTKCV + + I + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG LA + + A+ V+ P GET+DATTE+ IYQV+L ++LV L FS+GK D +AWVD I+ A D+V D +E + + +K I TL PLP +EV H T F+NELKLSDFK +LTK+ I SEF+GGVL+C N +A+RRH++G++ +EG + +DYYRV++LLYEQYAIV Sbjct: 1 MTSIIKLHAISGAL-----DESPP-CYILQVDELRILLDCGWDEKFDPDFIKELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLSCPIYATIPVYKMGQMFMYDIYQSRHNMEDFNLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDSFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVGVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMKSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRDLFLQWCSNPQNSIIITSRTSPGTLARDLVENGGNRNITLEIKKKVRLEGAELEEYMKKEKVKQEQLKQEKMETADVSSESEDEIEVGGAKG--KHDLLVKQEHKPG------FFKQSKKQHPMFPFVEEKIKVDEYGEIIKPEDYKIAEVLPEAEDNKENIEVKQEEQVQHPAETMSDIPTKCVQTTRTIAVNASVTYIDFEGRSDGESLQKILAQLRPRRIVLVRGSPKDTELLAAQAQNVGAR-------------VFIPSRGETLDATTETHIYQVRLTDALVSGLNFSRGKGDSEVAWVDALIT-ARDQVCRDVFMDSENEDLIDRTEK---ILTLEPLPLNEVPGHQTTFINELKLSDFKQILTKANIPSEFSGGVLWCCNNTIAVRRHEAGKIIMEGCLSEDYYRVKELLYEQYAIV 738
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|749774165|ref|XP_011142384.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Harpegnathos saltator]) HSP 1 Score: 903.664 bits (2334), Expect = 0.000e+0 Identity = 451/779 (57.89%), Postives = 574/779 (73.68%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDW--------VDGTIDHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRIS----FALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + + E+K +N+IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WC PQN+II+TSRT GTLA DL+ G NR + LE+K+R+KL G ELEE++++E+ + KQ +M + D S S++E+E GG +G KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI+KPED+ V+ ++ + K + + HP A ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AW+D I+ D +AD +P D M+E+ K I TL PLP +EV H T F+NELKLSDFK VL KS ISSEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAISGAM-----DESPP-CYILQVDELRILLDCGWDENFDQDFIKELKRHVNQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCTNPQNSIILTSRTSPGTLARDLVEKGGNRNITLEVKRRVKLEGIELEEYQKREKLKQEQLKQEQMEIADVSSESEDEIEVGGARG--KHDLLVKQESKPG------FFKQSKKQHPMFPFVEEKIKIDEYGEIIKPEDYKIAETLPEVEDNKENVEMKQEE-INHHPEIA------ADIPTKCIQVSRAMTVNAAVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSSKDTEILAQQAQSAGAR-------------VFIPARGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWIDAMITARDQICRDAIADTEPE---DAIMDESDK----ILTLEPLPLNEVPGHQTTFINELKLSDFKQVLNKSNISSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 738
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|645007258|ref|XP_008216190.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Nasonia vitripennis]) HSP 1 Score: 901.353 bits (2328), Expect = 0.000e+0 Identity = 449/769 (58.39%), Postives = 574/769 (74.64%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKV-NAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTI--DHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRISFALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD +FD + + E+K +++IDAVLLSYPD HLG LPY+V GLSCPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLM++FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSRDLFL WC PQN+IIITSRT GTLA DL+ NG NR + LEIKK+++L GAELEE+ +KE+ + KQ +M D S S++E+E GG KG KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI+KPED+ + + E K + ++ + + ++PTKCV + + I + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG LA + + A+ V+ P GET+DATTE+ IYQV+L ++LV L FS+GK D +AWVD I+ A D+V D+ +E + + +K I TL PLP +EV T F+NELKLSDFK +LTK+ I SEF+GGVL+C N +A+RRH++G++ +EG + +DYYRV++LLYEQYAIV Sbjct: 1 MTSIIKLHAISGAL-----DESPP-CYILQVDELRILLDCGWDEKFDPDFIKELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLSCPIYATIPVYKMGQMFMYDIYQSRHNMEDFNLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDSFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVGVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMKSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRDLFLQWCSNPQNSIIITSRTSPGTLARDLVENGGNRNITLEIKKKVRLEGAELEEYMKKEKVKQEQLKQEKMETADVSSESEDEIEVGGAKG--KHDLLVKQEHKPG------FFKQSKKQHPMFPFVEEKIKVDEYGEIIKPEDYKIAEVLPEAEDNKENIEVKQEEQVQHPAETMSDIPTKCVQTTRTIAVNASVTYIDFEGRSDGESLQKILAQLRPRRIVLVRGSPKDTELLAAQARNVGAR-------------VFIPSRGETLDATTETHIYQVRLTDALVSGLNFSRGKGDSEVAWVDALIT-ARDQVCRDVFMDNENEDLIDRTEK---ILTLEPLPLNEVXXXQTTFINELKLSDFKQILTKANIPSEFSGGVLWCCNNTIAVRRHEAGKIIMEGCLSEDYYRVKELLYEQYAIV 738
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|815824970|ref|XP_012233846.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Linepithema humile] >gi|815824972|ref|XP_012233847.1| PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Linepithema humile]) HSP 1 Score: 901.353 bits (2328), Expect = 0.000e+0 Identity = 449/772 (58.16%), Postives = 569/772 (73.70%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKADPYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRIS----FALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + + E+K +N+IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WC PQN+II+TSRT GTLA DL+ G NR + LE+++R+KL G ELEE++++E+ + KQ +M D S S++E+E GG +G KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI+KPED+ E + +A+ +I ++PTKCV + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AWVD I+ D VAD + +D A++E+ K I TL PLP +EV H T F+NELKLSDFK VL KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAISGAM-----DESPP-CYILQVDELRILLDCGWDENFDQDFIRELKRHVNQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCTNPQNSIILTSRTSPGTLARDLVERGGNRNITLEVRRRVKLEGIELEEYQKREKLKQEQMKQEQMETADVSSESEDEIEVGGVRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFVEEKIKIDEYGEIIKPEDYKIAETVSEIEDNKENIEMKQEEANHHPEIAADIPTKCVQVSRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGLSKDTEILAQQAQSAGAR-------------VFIPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWVDAMITARDQVCRDAVADTESKD----AIDESDK----ILTLEPLPLNEVPGHQTTFINELKLSDFKQVLNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 737
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|1059236154|ref|XP_017762954.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Eufriesea mexicana] >gi|1026558942|gb|OAD53310.1| putative cleavage and polyadenylation specificity factor subunit 2 [Eufriesea mexicana]) HSP 1 Score: 900.582 bits (2326), Expect = 0.000e+0 Identity = 452/775 (58.32%), Postives = 568/775 (73.29%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKAD---PYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRIS----FALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + E+K +++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WCG PQN+II+TSRT GTLA DL+ G NR + LE+K+RIKL G ELEE++RKE+ + KQ +M D S S++E+E GG +G KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI++PED+ I P+ D L DA +I ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG + LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AWVD I+ D +AD + D D++ I TL PLP +EV H T FVNELKLSDFK +L KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAVSGAM-----DESPP-CYILQVDELRILLDCGWDENFDHEFIKELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCGNPQNSIILTSRTSPGTLARDLVEKGGNRNITLEVKRRIKLEGLELEEYQRKEKLKQEQLKQEQMETADVSSESEDEIEVGGGRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFVEEKIKIDEYGEIIRPEDY---KIAETMPEVDDNKENLETKQEDAAHHPEIPTDIPTKCIQVTRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSQKDTEILAQQAQSGGAR-------------VFVPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWVDAMITARDQVCRDAIADTESNDTIDQS--------DKILTLEPLPLNEVPGHQTTFVNELKLSDFKQILNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 737
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|380025109|ref|XP_003696322.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Apis florea]) HSP 1 Score: 900.582 bits (2326), Expect = 0.000e+0 Identity = 452/775 (58.32%), Postives = 570/775 (73.55%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKAD---PYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRIS----FALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + E+K +++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WCG PQN+II+TSRT GTLA DL+ G NR + LE+K+RIKL G ELEE++RKE+ + KQ +M D S S++E+E GG +G KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI++PED+ I P+ D L D +I ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG + LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AWVD I+ D VA +P D A++++ K I TL PLP +EV H T F+NELKLSDFK +L KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAVSGAM-----DESPP-CYILQVDELRILLDCGWDENFDQEFIKELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCGNPQNSIILTSRTSPGTLARDLVEKGGNRNITLEVKRRIKLEGLELEEYQRKEKLKQEQLKQEQMETADVSSESEDEIEVGGGRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFVEEKIKIDEYGEIIRPEDY---KIAETMPEVDDNKENLETKQEDTAHHPEIPTDIPTKCIQVTRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSQRDTEILAQQAQSAGAR-------------VFIPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWVDAMITARDQICRDAVAGTEPND----AIDQSDK----ILTLEPLPLNEVPGHQTTFINELKLSDFKQILNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 737 The following BLAST results are available for this feature:
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold281_size224178:128942..131997- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold281_size224178-snap-gene-1.30 ID=maker-scaffold281_size224178-snap-gene-1.30|Name=cleavage and polyadenylation specificity factor subunit 2|organism=Tigriopus kingsejongensis|type=gene|length=3056bp|location=Sequence derived from alignment at scaffold281_size224178:128942..131997- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cleavage and polyadenylation specificity factor subunit 2' has the following synonyms
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