general transcription factor iih subunit 3, maker-scaffold297_size217559-snap-gene-0.27 (gene) Tigriopus kingsejongensis

Overview
Namegeneral transcription factor iih subunit 3
Unique Namemaker-scaffold297_size217559-snap-gene-0.27
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of general transcription factor iih subunit 3 vs. L. salmonis genes
Match: EMLSAG00000000259 (supercontig:LSalAtl2s:LSalAtl2s103:1015218:1016337:1 gene:EMLSAG00000000259 transcript:EMLSAT00000000259 description:"snap_masked-LSalAtl2s103-processed-gene-10.11")

HSP 1 Score: 196.052 bits (497), Expect = 2.924e-62
Identity = 108/260 (41.54%), Postives = 146/260 (56.15%), Query Frame = 0
Query:   17 GVLAEPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSV 276
            G   + + QLL++V+DMNPNQ  F   P +L   LD+ +  AN+HLMLHP+NA+A + S +    FLYP   D    + +RQ DGQ+E F  VE T+R +   +L++E   ++    +S LSG+L+MALSYI+RRR+E      L++R+L                                          QGADITGG+Y  V      ALLQFL WIFLP   +R  L LPS ++VD+RAACFCHR L+DIGFVCS+
Sbjct:    8 GSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISS--QTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNA--ALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218          
BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|50403772|sp|Q13889.2|TF2H3_HUMAN (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=Basic transcription factor 2 34 kDa subunit; Short=BTF2 p34; AltName: Full=General transcription factor IIH polypeptide 3; AltName: Full=TFIIH basal transcription factor complex p34 subunit)

HSP 1 Score: 258.07 bits (658), Expect = 7.532e-84
Identity = 136/296 (45.95%), Postives = 184/296 (62.16%), Query Frame = 0
Query:   21 EPQGQLLVLVLDMNPNQVFFTKQ--PESLF---HWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQ-----------DESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGP 300
            E +  LLV+V+D NP  +++ KQ   ES F     +D+ + L NSHL ++ +N +A IASH Q   FLYP +  +            E +    +DG++E        I ++   ++          H E+LL+G+L+ AL YIHR  +E+   + + SR+LV+ A+ D+A QYMN+MNV F+AQK  ++ID C+L+ D+GLLQQ  DITGG+Y KV     P+LLQ+L W+FLPD   R  L LP    VDYRAACFCHRNLI+IG+VCSVCLSIFC FSPICTTC T FK   P
Sbjct:    5 EDELNLLVIVVDANP--IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMTKSD--IKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVP--QMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLP 294          
BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|122131719|sp|Q05B56.1|TF2H3_BOVIN (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=General transcription factor IIH polypeptide 3)

HSP 1 Score: 256.914 bits (655), Expect = 2.354e-83
Identity = 135/297 (45.45%), Postives = 183/297 (61.62%), Query Frame = 0
Query:   21 EPQGQLLVLVLDMNPNQVFFTKQ--PESLF---HWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQ------------DESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGP 300
            E +  LLV+++D NP  +++ KQ   ES F     +D+ + L NSHL ++ +N +A IASH Q   FLYP +  +             E      +DG++E        I ++   ++          H E+LL+G+L+ AL YIHR  +E+   + + SR+LV+ A+ D+A QYMN+MNV F+AQK  ++ID C+L+ D+GLLQQ  DITGG+Y KV     P+LLQ+L W+FLPD   R  L LP    VDYRAACFCHRNLI+IG+VCSVCLSIFC FSPICTTC T FK   P
Sbjct:    5 EDELNLLVIIVDTNP--IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPSSEFTPSGSKDGKYELLTAANEVIAEEIKDLMTKSD--IEGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVP--QMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLP 295          
BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|81888006|sp|Q561R7.1|TF2H3_RAT (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=General transcription factor IIH polypeptide 3)

HSP 1 Score: 252.677 bits (644), Expect = 1.008e-81
Identity = 134/297 (45.12%), Postives = 185/297 (62.29%), Query Frame = 0
Query:   21 EPQGQLLVLVLDMNPNQVFFTKQ--PESLF---HWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQ------DESDNL------RQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGP 300
            E +  LLV+++D NP  +++ KQ   ES F     +D+ + LAN+HL ++ +N +A IASH Q   FLYP +  +      D  + L        +DG++E        I ++   ++          H E+LL+G+L+ AL YIHR  + +   + + SR+LV+ A+ D+A QYMN+MNV F+AQK  ++ID C+L+ D+GLLQQ  DITGG+Y KV     P+LLQ+L W+FLPD   R  L LP    VDYRAACFCHR+LI+IG+VCSVCLSIFC FSPICTTC T FK   P
Sbjct:    5 EDELNLLVIIVDTNP--IWWGKQALKESQFTLSKCMDAVMVLANAHLFMNRSNQLAVIASHIQESRFLYPGKNGRLGDFFGDPGNALPDCNPSGSKDGKYELLTAANEVIAEEIKDLMTKSD--IKGQHTETLLAGSLAKALCYIHRASKAVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVP--QMPSLLQYLLWVFLPDQDQRSQLILPPPIHVDYRAACFCHRSLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLP 295          
BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|22654149|sp|Q8VD76.1|TF2H3_MOUSE (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=Basic transcription factor 2 34 kDa subunit; Short=BTF2 p34; AltName: Full=General transcription factor IIH polypeptide 3; AltName: Full=TFIIH basal transcription factor complex p34 subunit)

HSP 1 Score: 250.366 bits (638), Expect = 7.674e-81
Identity = 134/297 (45.12%), Postives = 183/297 (61.62%), Query Frame = 0
Query:   21 EPQGQLLVLVLDMNPNQVFFTKQ--PESLF---HWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQ------DESDNL------RQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGP 300
            E +  LLV+++D NP  +++ KQ   ES F     +D+ + LANSHL ++ +N +A IASH Q    LYP +         D  + L        +DG++E        I ++   ++          H E+LL+G+L+ AL YIHR  + +   + + SR+LV+ A+ D+A QYMN+MNV F+AQK  ++ID C+L+ D+GLLQQ  DITGG+Y KV     P+LLQ+L W+FLPD   R  L LP    VDYRAACFCHR+LI+IG+VCSVCLSIFC FSPICTTC T FK   P
Sbjct:    5 EDELNLLVIIVDTNP--IWWGKQALKESQFTLSKCMDAVMVLANSHLFMNRSNQLAVIASHIQESRLLYPGKNGGLGDFFGDPGNALPDCNPSGSKDGKYELLTVANEVIAEEIKDLMTKSD--IKGQHTETLLAGSLAKALCYIHRVNKAVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKV--PQMPSLLQYLLWVFLPDQDQRSQLILPPPIHVDYRAACFCHRSLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLP 295          
BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|62901129|sp|O74366.1|TFB4_SCHPO (RecName: Full=General transcription and DNA repair factor IIH subunit tfb4; Short=TFIIH subunit tfb4; AltName: Full=RNA polymerase II transcription factor B subunit 4)

HSP 1 Score: 190.66 bits (483), Expect = 1.137e-57
Identity = 105/273 (38.46%), Postives = 156/273 (57.14%), Query Frame = 0
Query:   26 LLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQD---ESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVF 295
            LLV++LD NP   +   +   +   L       N+HL  H +N +A +ASHS    +LYPS   +    E D  ++ +  +  F +V+  +      ++ +    T  V  ++++SGALS AL+YI++ + +     +L SR+L+ S +GD A QY+  MN  F AQK  + I+ C +E     L+Q AD TGG+Y KVD+     LLQ+L     PD  LR+ L+ P+   VD+RA CFCH+ ++DIGFVCSVCLSIFC+    C+TCHT F
Sbjct:   25 LLVVILDANPASWYSLSKKVPVSKVLADITVFLNAHLAFHHDNRVAVLASHSDKVEYLYPSIAPEQKVAEVDPTKEAN-TYRKFREVDDLVLSGMKRLMSS----TDKVSRKTMISGALSRALAYINQVQNK----NTLRSRILIFSLTGDVALQYIPTMNCIFCAQKKNIPINVCNIEGGTLFLEQAADATGGIYLKVDNPK--GLLQYLMMSLFPDQNLRKHLNTPNQANVDFRATCFCHKKVLDIGFVCSVCLSIFCEPRVHCSTCHTKF 286          
BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|75155791|sp|Q8LF41.1|TFB4_ARATH (RecName: Full=General transcription and DNA repair factor IIH subunit TFB4; Short=AtTFB4; Short=TFIIH subunit TFB4; AltName: Full=RNA polymerase II transcription factor B subunit 4)

HSP 1 Score: 148.288 bits (373), Expect = 2.822e-41
Identity = 99/293 (33.79%), Postives = 148/293 (50.51%), Query Frame = 0
Query:   36 NQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFE----GFYQVEATIRKQAAHILRAETQPTAPVHAES-----LLSGALSMALSYIHR--RRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLE-KDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVF-----KTPGPLPGMKRKAPAT 311
            N +F++    +   +L   ++  N+ L L+  N +  IA+   SC ++Y S        +L    G FE    G   +  ++ K+    +  + + +    +E      LLSG+LSMAL YI R  R   L        R+L +  S D   QY+  MN  FSAQ++ V ID+C +  +++  LQQ + ITGGV+     +    L Q+LT IF  D   R  + LP    VD+RA+CFCH+  ID+G++CSVCLSIFC+    C+TC +VF              KRKAP+T
Sbjct:   23 NPLFWSTTSITFSQFLSHVLAFLNAVLGLNQLNQVVVIATGYSSCDYIYDS--------SLTSNHGNFESNGTGMPAIFGSLLKKLEEFVTKDEELSKEEVSEDRIPSCLLSGSLSMALCYIQRVFRSGHLHPQP----RILCLQGSPDGPEQYVAVMNSIFSAQRLMVPIDSCYIGVQNSAFLQQASYITGGVHHT--PKQLDGLFQYLTTIFATDLHSRGFVQLPKPIGVDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDASSASDKKRKAPST 301          
BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|62901135|sp|Q12004.1|TFB4_YEAST (RecName: Full=General transcription and DNA repair factor IIH subunit TFB4; Short=TFIIH subunit TFB4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit; AltName: Full=RNA polymerase II transcription factor B subunit 4)

HSP 1 Score: 136.346 bits (342), Expect = 2.222e-36
Identity = 93/299 (31.10%), Postives = 148/299 (49.50%), Query Frame = 0
Query:   19 LAEPQGQLLVLVLDMNPNQVFFTKQPE-----SLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQT---DQDESDNLRQRD------GQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMS----ASGDTATQYMNYMNVFFSAQKMGVVIDTCML--EKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSP--ICTTCHTVF 295
            + E    LL +++++ P +++ T   E     S+   L++ I   N+HL  +  N +A IA++SQ   +LYP  T      ES+N  + D        +  F  V+ T+ ++   +   E +        S L+GA+S  L+Y++R  +E SV  SL SR+LV++    +S D   QY+  MN  FSA KM   ID   +   K++  LQQ  D T GVY  V+S     L+Q+L      D  LR  +  P+   VD+R +C+    ++ +GF+CSVCL +     P   C  C + F
Sbjct:   18 VTEESPSLLTVIIEIAP-KLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAYSQGIKYLYPESTSALKASESENKTRSDLKIINSDMYRRFRNVDETLVEEIYKLFELEKKQIEQNSQRSTLAGAMSAGLTYVNRISKE-SVTTSLKSRLLVLTCGSGSSKDEIFQYIPIMNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTE--GLIQYLATAMFIDPSLRPIIVKPNHGSVDFRTSCYLTGRVVAVGFICSVCLCVLSIIPPGNKCPACDSQF 312          
BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|62901344|sp|Q75B93.1|TFB4_ASHGO (RecName: Full=General transcription and DNA repair factor IIH subunit TFB4; Short=TFIIH subunit TFB4; AltName: Full=RNA polymerase II transcription factor B subunit 4)

HSP 1 Score: 135.191 bits (339), Expect = 6.802e-36
Identity = 96/299 (32.11%), Postives = 145/299 (48.49%), Query Frame = 0
Query:   19 LAEPQGQLLVLVLDMNPN-QVFFTKQ---PESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQ-------FEGFYQVEATIRKQAAHILRAET---QPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVM----SASGDTATQYMNYMNVFFSAQKMGVVIDTCMLE--KDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSP--ICTTCHTVF 295
            L E    LL LV+D NP     F ++      L   L S I   N+HL  + +N ++ IA+ S+   +LYP   D++ S   ++ + +       + GF  V+  + ++   + + E+   +   P    S LSGA+S  L+YI+R   E     SL SR+LV+    SAS D   QY+  MN  FSA KM   ID   +   K++  LQQ  D T G Y  V +     L+Q+L+     D  LR+ +  P+   VD+R +C+    ++ IGFVCSVCL +     P   C  C + F
Sbjct:   18 LVEETPSLLTLVIDTNPKLWAEFDREVGKKGQLMQVLKSTIVFLNAHLSFNNSNQVSVIAACSRGIKYLYPQADDKEGSTKKKKSEDRSIINRNMYRGFRNVDEAVVEELYRVFQQESKQLEDGVPQPFRSTLSGAMSAGLTYINRITHETE-GVSLKSRLLVITCGSSASKDEVFQYIPIMNCIFSATKMKCPIDVVKVGGVKESTFLQQATDATNGNYLHVANTD--GLIQYLSTAMFIDPSLRQWVVKPNQSSVDFRTSCYLTGKVVAIGFVCSVCLCVLSIIPPGNKCPACDSEF 313          
BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|74861043|sp|Q86IB5.1|TF2H3_DICDI (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=TFIIH basal transcription factor complex subunit 3)

HSP 1 Score: 134.035 bits (336), Expect = 2.995e-35
Identity = 90/262 (34.35%), Postives = 146/262 (55.73%), Query Frame = 0
Query:   50 WLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYP-SQTD--------------QDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCML-EKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVF 295
            +L+  +   N++LML+  N +A I S     SF++P S  D               +  + L   +   +G  Q+ A ++K    I   +T   +   +      ++S+AL YI+R ++E     ++  R+LV + S D ++QY++ MN  FS+QK  + +D+C+L + D+  LQQ + +T G+Y K   +    L Q+L   FL DT  R++L+ P++  VDYRA+CFCH+ ++DIG+VCSVCLSIFC  S  C+TC T F
Sbjct:   95 FLEHFMVFINAYLMLNQENQLAIICSKIGESSFVFPQSNIDQYQQEQQELEQRQLNENGELLPTPNKTIQG--QILAKLQKLDLEIKHDQTDILSSSFSA-----SMSIALCYINRIKRE---TPTIKPRILVFNISPDVSSQYISVMNCIFSSQKQSIPVDSCILSQSDSTFLQQASHLTSGIYLKPQKQEL--LSQYLLTTFLLDTLSRKSLAYPTLKSVDYRASCFCHKRIVDIGYVCSVCLSIFCGHSSSCSTCGTKF 344          
BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|62901298|sp|Q6CVX9.1|TFB4_KLULA (RecName: Full=General transcription and DNA repair factor IIH subunit TFB4; Short=TFIIH subunit TFB4; AltName: Full=RNA polymerase II transcription factor B subunit 4)

HSP 1 Score: 130.954 bits (328), Expect = 2.371e-34
Identity = 87/260 (33.46%), Postives = 132/260 (50.77%), Query Frame = 0
Query:   45 ESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQ-PTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVM----SASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEK--DAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSP--ICTTCHTVF 295
            + L   L S +   N+HL  +  N +  IA+HS+   +LYPS  D   S ++   D  + GF  V+  + +Q   + + E +   + V  +S LSGA+S AL+Y++R  +E +   SL SR+LV+    S   D   QY+  MN  FSA KM   ID   +    ++  LQQ  D T GVY  V++     L+Q+L+     D  LR  +  P+   VD+R +CF    ++ +GFVCSVCL +     P   C  C + F
Sbjct:   56 KQLIEALKSIVVFLNAHLAFNSGNQVCLIAAHSEGMKYLYPS-ADSKPSMSMVSSD-MYRGFRNVDEIVVEQWYRLFKEELEGQESKVSMKSSLSGAMSSALTYVNRILKE-NENTSLRSRLLVITCGTSQGKDEIFQYIPIMNCIFSATKMKCSIDVVKIGGGIESTFLQQATDATSGVYLHVENTR--GLIQYLSTAMFIDPSLRNVIIKPNQGSVDFRTSCFLTGKVVAVGFVCSVCLCVLSVIPPGQKCPACDSPF 310          
BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|225717796|gb|ACO14744.1| (General transcription factor IIH subunit 3 [Caligus clemensi])

HSP 1 Score: 335.88 bits (860), Expect = 4.905e-112
Identity = 162/288 (56.25%), Postives = 210/288 (72.92%), Query Frame = 0
Query:   23 QGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLPGMKRKAPA 310
            + QLL+LV+DMNPNQ    ++P  L   LDS +  +N+HL+LHP+NA+AAI S S    FLYPS    D S  LRQ DGQ+E F  VE ++R + + +L AET  +     +S LSG+L+MAL+YI+R+R+E   +  L +R+L+++ASGDTA+QYMNYMNVFF+AQK+ V++D CML+ D+ LLQQGADITGG+Y  V      ALLQFL WIFLP   +R  L LP+  +VD+RAACFCHR L+ +GFVCSVCLSIFCKFSPICTTC TVF+ P PL G K+K+ A
Sbjct:   14 EAQLLILVMDMNPNQRLLLEEPTRLTSVLDSLLCFSNAHLLLHPSNALAAIGSLSSGSYFLYPSSCIDDTSPELRQLDGQYELFTLVETSVRNKFSQLLEAETSGSE----DSPLSGSLAMALAYINRKRKE---SPELRARILILTASGDTASQYMNYMNVFFTAQKLNVLLDACMLQSDSPLLQQGADITGGLYFNVP--DLAALLQFLLWIFLPSAEIRPQLGLPTGVKVDFRAACFCHRQLVGVGFVCSVCLSIFCKFSPICTTCQTVFRVPAPLLGKKKKSIA 292          
BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|225712364|gb|ACO12028.1| (General transcription factor IIH subunit 3 [Lepeophtheirus salmonis] >gi|290562788|gb|ADD38789.1| General transcription factor IIH subunit 3 [Lepeophtheirus salmonis])

HSP 1 Score: 335.109 bits (858), Expect = 8.973e-112
Identity = 162/291 (55.67%), Postives = 211/291 (72.51%), Query Frame = 0
Query:   17 GVLAEPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLPGMKRK 307
            G   + + QLL++V+DMNPNQ  F   P +L   LD+ +  AN+HLMLHP+NA+A + S +    FLYP   D    + +RQ DGQ+E F  VE T+R +   +L++E   ++    +S LSG+L+MALSYI+RRR+E      L++R+LV++ASGDTA+QYMNYMNVFF+AQK+ V++DTCML+ D+ LLQQGADITGG+Y  V      ALLQFL WIFLP   +R  L LPS ++VD+RAACFCHR L+DIGFVCSVCLSIFCKFSPICTTC T+F+ P PL G K+K
Sbjct:    8 GSGGDSKAQLLIIVMDMNPNQKLFLHDPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISS--QTDSPLSGSLAMALSYINRRRKE---NMDLSARILVITASGDTASQYMNYMNVFFTAQKLDVLLDTCMLQIDSPLLQQGADITGGMYFNVPDNA--ALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSVCLSIFCKFSPICTTCQTIFRVPPPLMGGKKK 291          
BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|1325321303|ref|XP_023342456.1| (general transcription factor IIH subunit 3-like [Eurytemora affinis])

HSP 1 Score: 327.791 bits (839), Expect = 5.190e-109
Identity = 153/289 (52.94%), Postives = 203/289 (70.24%), Query Frame = 0
Query:   20 AEPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLPGMKRKA 308
             +   Q+LV+V+D+NPNQ+ F +   S    ++S I+  NSHLMLH  N IA +ASHS  CS+LYP  ++  E   LRQRDGQ+E  YQVE  +R++   +L  +    +   AESLLSG L+MAL+YI+R +  LS AE +  R+LV+S++GD+A QY+NYMNVFF+AQK+   +D CML  D+GLLQQG+DITGGVY KV+  +   LLQ+L W+FLP   LR  L  P   +VDYRAACFCHR L+D+G+VCSVCLSIFC+F+P+CTTCH+VF  P  +P  KR  
Sbjct:    4 VDESNQMLVVVVDVNPNQLLFARNTGSFSRIMNSVITFLNSHLMLHSTNRIALLASHSSGCSYLYPDPSEDTEL--LRQRDGQYEVLYQVETVVRRRLKAVLSRDMNLGSTAGAESLLSGGLAMALTYINRVKMNLSPAEKINPRLLVISSTGDSAAQYINYMNVFFTAQKLSYPLDVCMLGTDSGLLQQGSDITGGVYLKVE--NIERLLQYLVWMFLPSPPLRSMLGAPPPVKVDYRAACFCHRQLVDVGYVCSVCLSIFCRFNPVCTTCHSVFAPPKIIPKKKRDG 288          
BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|817067549|ref|XP_012255671.1| (general transcription factor IIH subunit 3 isoform X1 [Athalia rosae])

HSP 1 Score: 323.553 bits (828), Expect = 2.033e-107
Identity = 157/282 (55.67%), Postives = 195/282 (69.15%), Query Frame = 0
Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E +  LLV+VLD NP Q F  +    L   LDS I  AN+HLM   NN +A +A HS S +FLYP     D+   +RQ DGQ+EGF  VE  +R+    ++  E     P++ ESL+ GAL+MAL YI R  +E +  E + SR+LV++ S D+A+QYMNYMNVFF+AQK+GVVID C L+++ GLLQQG DITGG Y K+       LLQ+L W+FLPD  +R  L LP   +VDYRAACFCHR L+DIGFVCSVCLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EVEKSLLVIVLDTNPVQKFVRQDTRILTQCLDSVIVFANAHLMQKSNNQLAVMACHSHSSTFLYPD----DKPTEIRQTDGQYEGFTLVERMVRQNLQKLVN-EISTNKPLNTESLIGGALAMALCYIVRLEREKAAGEKIHSRILVITGSNDSASQYMNYMNVFFTAQKLGVVIDVCSLDQELGLLQQGCDITGGNYLKIP--QLAGLLQYLLWVFLPDPNIRSKLVLPPPVKVDYRAACFCHRELVDIGFVCSVCLSIFCKFSPICTTCHTVFKMPGPIP 278          
BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|998497658|ref|XP_015524613.1| (PREDICTED: general transcription factor IIH subunit 3 [Neodiprion lecontei])

HSP 1 Score: 321.242 bits (822), Expect = 1.946e-106
Identity = 154/280 (55.00%), Postives = 196/280 (70.00%), Query Frame = 0
Query:   23 QGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            +  LLV+VLD NP Q F  +    L   LDS I  AN+HLM   NN +A +A HS S +FLYP +   +    +RQ DGQ+EGF  VE T+R+    ++  E     P++ ESL+ GAL+MAL YI R  +E +  E + SR+LV++ S D+A+QYMNYMNVFF+AQK+GVV+D C L+++ GLLQQG DITGG Y K+       LLQ+L W+FLPD ++R  L LP   +VDYRAACFCHR L+DIG+VCSVCLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    6 EKSLLVIVLDTNPVQKFVRQDTRILTQCLDSVIVFANAHLMQKSNNQLAVMACHSHSSTFLYPDEKPME----VRQIDGQYEGFMMVERTVRQNLQKLIH-EIVTNKPLNTESLIGGALAMALCYIVRLEREKAAGEKIHSRILVVTGSNDSASQYMNYMNVFFTAQKLGVVVDVCSLDQELGLLQQGCDITGGNYLKIP--QLAGLLQYLLWVFLPDPKVRSKLVLPPPVKVDYRAACFCHRELVDIGYVCSVCLSIFCKFSPICTTCHTVFKMPGPMP 278          
BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|1061119649|ref|XP_017885594.1| (PREDICTED: general transcription factor IIH subunit 3 [Ceratina calcarata])

HSP 1 Score: 318.931 bits (816), Expect = 1.343e-105
Identity = 154/282 (54.61%), Postives = 195/282 (69.15%), Query Frame = 0
Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E    LL++VLD+NP Q    ++   L   LDS I  AN+HLM   NN +A +A +S    FLYP     ++S  +RQ DGQ+E F  VE TIR+Q   ++  E     P++ ESL+SGAL+MAL Y+ R  +E    E L SR+LV++AS D+A QYMNYMN+FF+AQKMG+++D C L++D  LLQQG DITGG+Y KV       LLQ+L WIFLPD  +R  L LP   +VDYRAACFCH+ LIDIG+VCS+CLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EIDTSLLIIVLDVNPVQRIVKQETRILTQCLDSTIVFANAHLMQSSNNQLAVLACYSHGAKFLYPC----EKSSEIRQIDGQYEKFTMVERTIRQQLQQVIN-EISLDKPLNGESLMSGALTMALCYVARLEREKVAGEKLHSRMLVITASNDSAIQYMNYMNIFFTAQKMGIILDVCSLDQDLTLLQQGCDITGGIYLKVP--QLSGLLQYLLWIFLPDPNVRSKLVLPPPVKVDYRAACFCHQELIDIGYVCSICLSIFCKFSPICTTCHTVFKMPGPIP 278          
BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|340717520|ref|XP_003397229.1| (general transcription factor IIH subunit 3 [Bombus terrestris])

HSP 1 Score: 318.931 bits (816), Expect = 1.708e-105
Identity = 152/282 (53.90%), Postives = 196/282 (69.50%), Query Frame = 0
Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E +  LL++VLD+NP Q    ++   L   LDS +  AN+HLM   NN +A IA HS    FLYP +   +    +RQ DGQ+E F  +E TIR+Q   ++  E     P++ ESL+SGAL+MAL Y+ R  +E   +E + SR+LV++AS D+ATQYMNYMN+FF+AQKMG+++D C L+++  LLQQG DITGG Y KV       LLQ+L WIFLPD  +R  L LP   +VDYRAACFCH+ LIDIG+VCS+CLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EIETSLLIIVLDVNPVQRIIKQETRILTQCLDSTVVFANAHLMQSSNNQLAVIACHSHGAKFLYPCEKPLE----IRQIDGQYEKFTMIERTIRQQLQQVIN-EISMDKPLNGESLISGALTMALCYVARLEREKVASEKIYSRILVITASNDSATQYMNYMNIFFTAQKMGIILDVCSLDQELTLLQQGCDITGGNYLKVP--QLNGLLQYLLWIFLPDPNVRSKLVLPPPVKVDYRAACFCHQELIDIGYVCSICLSIFCKFSPICTTCHTVFKIPGPIP 278          
BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|925671794|gb|KOX69540.1| (General transcription factor IIH subunit 3 [Melipona quadrifasciata])

HSP 1 Score: 318.546 bits (815), Expect = 2.101e-105
Identity = 153/282 (54.26%), Postives = 195/282 (69.15%), Query Frame = 0
Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E +  LL++VLD+NP Q    ++   L   LDS I  AN+HLM   NN +A IA HS    FLYP +   +    +RQ DGQ+E F  VE T+R+Q   ++  E     P++ ESL+SGAL+MAL Y+ R  +E    E + SR+LV++AS D+ATQYMNYMN+FF+AQKMG+++D C L+++  LLQQG DITGG Y KV       LLQ+L WIFLPD  +R  L LP   +VDYRAACFCH+ LIDIG+VCS+CLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EIETSLLIIVLDVNPVQRIIKQETRILTQCLDSTIVFANAHLMQSSNNQLAVIACHSHGAKFLYPCEKPVE----IRQIDGQYEKFTMVERTVRQQLQQVIN-EISLDKPLNGESLISGALTMALCYVARLEREKIAGEKIYSRILVITASNDSATQYMNYMNIFFTAQKMGIILDVCSLDQELTLLQQGCDITGGNYLKVP--QLSGLLQYLLWIFLPDPNVRSKLVLPPPVKVDYRAACFCHQELIDIGYVCSICLSIFCKFSPICTTCHTVFKMPGPIP 278          
BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|350407575|ref|XP_003488130.1| (general transcription factor IIH subunit 3 [Bombus impatiens])

HSP 1 Score: 318.546 bits (815), Expect = 2.557e-105
Identity = 152/282 (53.90%), Postives = 196/282 (69.50%), Query Frame = 0
Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E +  LL++VLD+NP Q    ++   L   LDS +  AN+HLM   NN +A IA HS    FLYP +   +    +RQ DGQ+E F  +E TIR+Q   ++  E     P++ ESL+SGAL+MAL Y+ R  +E   +E + SR+LV++AS D+ATQYMNYMN+FF+AQKMG+++D C L+++  LLQQG DITGG Y KV       LLQ+L WIFLPD  +R  L LP   +VDYRAACFCH+ LIDIG+VCS+CLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EIETSLLIVVLDVNPVQRIIKQETRILTQCLDSTVVFANAHLMQSSNNQLAVIACHSHGAKFLYPCEKPLE----IRQIDGQYEKFTMIERTIRQQLQQVIN-EISMDKPLNGESLISGALTMALCYVARLEREKVASEKIYSRILVITASNDSATQYMNYMNIFFTAQKMGIILDVCSLDQELTLLQQGCDITGGNYLKVP--QLNGLLQYLLWIFLPDPNVRSKLVLPPPVKVDYRAACFCHQELIDIGYVCSICLSIFCKFSPICTTCHTVFKIPGPIP 278          
BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|383855904|ref|XP_003703450.1| (PREDICTED: general transcription factor IIH subunit 3 isoform X1 [Megachile rotundata])

HSP 1 Score: 317.39 bits (812), Expect = 6.257e-105
Identity = 155/282 (54.96%), Postives = 194/282 (68.79%), Query Frame = 0
Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E +  LL++VLD+NP Q    ++   L   LDS I  AN+HLM   NN +A IA HS    FLYP     ++   +RQ DGQ+E F  VE T+R+Q   ++  E     P++ ESL+SGAL+MAL YI R  +E    + L SR+L ++AS D+ATQYMNYMN+FF+AQKMGV++D C L+++  LLQQG DITGG Y KV       LLQ+L WIFLPD  +R  L LP   +VDYRAACFCH+ LIDIG+VCSVCLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EIETSLLIIVLDVNPVQRIVKQETRILTQCLDSTIVFANAHLMQSSNNQLAMIACHSHGAKFLYPC----EKPVEIRQIDGQYEKFTMVERTVRQQLQQVIN-EISMDKPLNGESLISGALTMALCYIARLEREKVAGQKLYSRILTITASNDSATQYMNYMNIFFTAQKMGVILDVCSLDQELTLLQQGCDITGGNYLKVP--QLSGLLQYLLWIFLPDPSIRSKLVLPPPVKVDYRAACFCHQELIDIGYVCSVCLSIFCKFSPICTTCHTVFKMPGPIP 278          
The following BLAST results are available for this feature:
BLAST of general transcription factor iih subunit 3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000002592.924e-6241.54supercontig:LSalAtl2s:LSalAtl2s103:1015218:1016337... [more]
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BLAST of general transcription factor iih subunit 3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
gi|50403772|sp|Q13889.2|TF2H3_HUMAN7.532e-8445.95RecName: Full=General transcription factor IIH sub... [more]
gi|122131719|sp|Q05B56.1|TF2H3_BOVIN2.354e-8345.45RecName: Full=General transcription factor IIH sub... [more]
gi|81888006|sp|Q561R7.1|TF2H3_RAT1.008e-8145.12RecName: Full=General transcription factor IIH sub... [more]
gi|22654149|sp|Q8VD76.1|TF2H3_MOUSE7.674e-8145.12RecName: Full=General transcription factor IIH sub... [more]
gi|62901129|sp|O74366.1|TFB4_SCHPO1.137e-5738.46RecName: Full=General transcription and DNA repair... [more]
gi|75155791|sp|Q8LF41.1|TFB4_ARATH2.822e-4133.79RecName: Full=General transcription and DNA repair... [more]
gi|62901135|sp|Q12004.1|TFB4_YEAST2.222e-3631.10RecName: Full=General transcription and DNA repair... [more]
gi|62901344|sp|Q75B93.1|TFB4_ASHGO6.802e-3632.11RecName: Full=General transcription and DNA repair... [more]
gi|74861043|sp|Q86IB5.1|TF2H3_DICDI2.995e-3534.35RecName: Full=General transcription factor IIH sub... [more]
gi|62901298|sp|Q6CVX9.1|TFB4_KLULA2.371e-3433.46RecName: Full=General transcription and DNA repair... [more]

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BLAST of general transcription factor iih subunit 3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225717796|gb|ACO14744.1|4.905e-11256.25General transcription factor IIH subunit 3 [Caligu... [more]
gi|225712364|gb|ACO12028.1|8.973e-11255.67General transcription factor IIH subunit 3 [Lepeop... [more]
gi|1325321303|ref|XP_023342456.1|5.190e-10952.94general transcription factor IIH subunit 3-like [E... [more]
gi|817067549|ref|XP_012255671.1|2.033e-10755.67general transcription factor IIH subunit 3 isoform... [more]
gi|998497658|ref|XP_015524613.1|1.946e-10655.00PREDICTED: general transcription factor IIH subuni... [more]
gi|1061119649|ref|XP_017885594.1|1.343e-10554.61PREDICTED: general transcription factor IIH subuni... [more]
gi|340717520|ref|XP_003397229.1|1.708e-10553.90general transcription factor IIH subunit 3 [Bombus... [more]
gi|925671794|gb|KOX69540.1|2.101e-10554.26General transcription factor IIH subunit 3 [Melipo... [more]
gi|350407575|ref|XP_003488130.1|2.557e-10553.90general transcription factor IIH subunit 3 [Bombus... [more]
gi|383855904|ref|XP_003703450.1|6.257e-10554.96PREDICTED: general transcription factor IIH subuni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold297_size217559supercontigscaffold297_size217559:64676..67902 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:regulation of transcription
Note DNA-dependent
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold297_size217559-snap-gene-0.27-mRNA-1maker-scaffold297_size217559-snap-gene-0.27-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold297_size217559:64676..67902+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold297_size217559-snap-gene-0.27 ID=maker-scaffold297_size217559-snap-gene-0.27|Name=general transcription factor iih subunit 3|organism=Tigriopus kingsejongensis|type=gene|length=3227bp|location=Sequence derived from alignment at scaffold297_size217559:64676..67902+ (Tigriopus kingsejongensis)
CTCATCCGGTCAATTCAGGTCACCCTGACTAGATTTTTCCGAGCTGTTTG TGTCTGTTGTGAAAATAAGAGTCAATAAGTTCCGCATGTCTGCCCGGAGA TCGGTGATTGAATGATTCGTTGCGCCCGTGTCTGGCCGTGGGATCACATT CGACCCTTTCACACCCAAAGTCCAGTGAGTCTATGTATGGCCAAGAAGTC CAAAGCCGCCTCGCGCCCGCCCCCGGCTGCCACGCCCACCCCAACCCCTT CGAGTGGACCCGTTCATTGGACCGCCCGTGGATTTGCCCGCATCTGCCTC GTGGTTCAACCCAATTGCGCCCAATCCTCGGTGCAAGAGGTAATGCCAAT TTCTCATTGTGCTACAAATTGAGGCAGCTCCTTCAGCGCTCCAACATGAT CCTACATCTTCGATTGATCCTACATCTTTGATTCAGTGCCACCAGGATAG CCACCATGTTGGAGTTCAGGGTGTGTGTGTGTGTGTGTGTAATCGCACCT TCCGGAGGTTTCGTGTTCTACACCATGGAACCCCCATGGTGAACACAGGG CCCACTGATGTTATTAGCTAATTTAGCTAGTCGCCGAGCAGCCCCGTACA ATCCAGCTCCAACCACTACTTTAATTGGTGGGGAACCACAAGGGACCTGT CCTCAAGATGTGGCCGCACCCGTTTTTCCTGATCTTTGAACGACTAAGGT GACAGGGAGTCGTCATTCACTCCCCTCAGTCGAAGAAAGTCTGGCGTGGC GAAAATTTCTTTATCCGCCGGGCCCGGGAATCGATCTGCGGCCTTTCAGC ACGGCAGACTTCTTCGCTGACCACTTCACCATTCAATCCACATGTGTGTT ACTCGGGTTCGAATCTCAGGGCGTCCCAGTTCACAGTGTGTGTTGCTCCC AGGCTCAAAGTATTCCATGAATGCATTGTGAAGTCATCAGTCCGGCCTGA GGTGGCGTGTGATTGATGCACCCAACTCAGTGCCACGGAGGCTGTGACCT GGCCAGCGCTGGGGGTGAGTTTGAACATTGAACATCCTGTTTGCTTTGTT TGTTTGGAAGGCCCTGGGCATTCCTGCCCACCTACTAGGGAAATCTCCGG GGAGTCATAGTCAGCCTTATAGAATCATGGTCAAATTTATCATGAATTAT TACCTTACCCTCGAGGAATGGCCACGGGTACGCCCACTTTAATCCCGCCA GGACAGCACACATTAGCTGTGAGTAAACACCACTAGTGGCCGGATATGGG CCAGCCCGGGGATCGAATCCACGACCCTCGGATAACGCAATGATAGATGA CTGATTGTGTCACTCTACCATTGCGCTACGCTGCTTGCCTACATTGAACA TCCATTGCACTTCACCTCGGGCAGGTGAATTTAATAATAATAATAATAAA TATGTGACTTTAATGCGTTAACTTATACCTCGACTCATTCGTAGGGAGGA GTGAAACCAAAAAGCGGTCAAGATTGTCATGAAAATCGCGAGAAACGGGC GAAAAAATGTGGTCTCTCCGGTCAATGAAACGAAAGGGAAATTCTTATAT AACACCCTGTACTACTCAAGCCTGAATTGAGTGTCCCAGAAAACCCCAAT TTTCGGTGTATCACTCAATTCGAAAAAGTAACGCTCAGTAAGTAAAAAAA AATTTGGCAACATTACAAGGCCATTGTTTGGTCAAAAATAACATCATAAT CCGAACCCTGGTCCACCAAGTGCTTGTCTGTGGGATGTTATCTGCTTCGT CTTAAGCTTGTGTTTGTCTGAGGTTATTCATGGAGTGCTAGAATCACTTT TCTTTCTGTGCGACCTCCAGGTGATTCTAGTACTCCTTGGGTTATTTAAG ATCAGAGCCTTGGGACTGACCTAGAGGACCTAAAGATCAGAGCCTTGGGA CTGACCTAGAGGACCTAAAGATCAGAGCCTTGGGACTGACCTAGAGGACC TAAAGATCAGAGCCTTGGGACTGACCTAGAGGACCTAAAGATCAGAGCCT TGGGACTGACCTAGAGGACCTTCATTGTCAAGTTCTACACCATTTTCTTT CAGGTGAACGAGAGTGAGGTCAAACTGAGACTGAACGCACCTCCACGTGA CGGCGAGGCCAACCTTGAGGTCGTGGCCCTTCTGGCTCGAGCCTTGGGCG CACGCAAGGGCGATCTGGCCATCGTCCAAGGCCACAAGTCGAGGACCAAA GTGATCGAATTGACGGGAAATCACGGCCAGACCGCCGATCAGATTTTGTC CCAGCTCCGATCGCAAGTGGACCGGTAGCCAAAATGTCGGATCTGGTAGT GACCACGGCCACCAGCGACCTTAAGGAGCCCGGGGTCCTGGCTGAGCCGC AGGGCCAGTTACTGGTGCTCGTTCTGGACATGAATCCCAATCAAGTCTTC TTCACCAAACAGCCCGAGTCGCTCTTTCATTGGCTGGACTCGGCCATCAG TCTGGCCAATTCCCATCTCATGCTCCATCCCAATAACGCTATCGCGGCCA TTGCCTCTCACAGTCAGTCTTGTAGTTTCCTCTATCCGTCCCAGACTGAC CAGGATGAGAGCGACAACCTCCGTCAACGGGACGGCCAATTCGAAGGCTT CTACCAAGTCGAGGCCACCATTCGGAAGCAAGCCGCCCACATCCTCCGGG CCGAGACCCAACCCACCGCCCCCGTCCACGCGGAATCCTTGCTCTCGGGT GCCTTGAGCATGGCCTTGTCGTACATCCATCGGCGCCGGCAGGAACTGTC GGTGGCCGAGAGTCTCACGTCGCGCGTGCTGGTCATGTCGGCCTCGGGTG ATACGGCCACCCAGTACATGAACTACATGAACGTGTTCTTTAGTGCTCAG AAAATGGGTGTGGTCATCGACACGTGCATGCTGGAGAAAGACGCCGGTCT CCTCCAACAGGGAGCCGATATCACCGGTGGTGTCTACCGGAAAGTGGACT CGAGACACTTTCCAGCCCTGCTCCAGTTCCTCACCTGGATATTTCTGCCG GATACTCGACTGCGCGAAGCACTCTCATTGCCTTCCATGGATCGGGTGGA CTATCGAGCCGCCTGCTTCTGCCACCGAAACCTCATTGATATCGGTTTCG TGTGCTCGGTTTGTTTGTCGATATTTTGCAAGTTCAGCCCGATCTGCACC ACTTGTCATACTGTATTCAAAACGCCGGGGCCTCTGCCTGGTATGAAGCG AAAAGCCCCCGCCACCTAACACGGGAA
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Synonyms
The feature 'general transcription factor iih subunit 3' has the following synonyms
Synonym
Tk11578
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