c-opsin, maker-scaffold303_size215788-snap-gene-1.12 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of c-opsin vs. L. salmonis genes
Match: EMLSAG00000002839 (supercontig:LSalAtl2s:LSalAtl2s163:319470:321170:1 gene:EMLSAG00000002839 transcript:EMLSAT00000002839 description:"maker-LSalAtl2s163-augustus-gene-3.3") HSP 1 Score: 94.3597 bits (233), Expect = 4.835e-21 Identity = 72/292 (24.66%), Postives = 139/292 (47.60%), Query Frame = 0
Query: 147 SVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEF-IISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQYGQIDLHSKRTAAMILITIWTLSLAM-ALPPLMGWAFYAPESSGMSCAPSW--ETPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGR-----------KSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQ--VSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALI 421
+V+ F + + + GN ++ FI K L+TP N+ ++NL +S+F +I VP+ F A + R W G C GF+ + G+ SI T+ + R ++ + + A ++L+ IW ++ + AL W + E ++C+ + E N TY + IIF + PL ++FF S+++ + + L+ + +A E ++ + + + + W PY L+ L + G + ++P S P K++ C NP++Y + +R+AL+
Sbjct: 58 AVFYFFLCSASMFGNLLVMYIFIKVKSLRTPSNMFVVNLALSDFCMILTQAVPVIFNAFMQRYWAWGVFGCKLYGFLGAVFGVESILTMVIIGYDRYNVIVKGMNGTRITPMRAFILLLFIWFYAIGVSALALFNVWGGFMAEGLLLTCSYDYLSEDWNNFTYIIFTIIFLYVIPLSMVFFFYSSIVKAVWSHELALKKQAKKMNVDSLRSNTDSNAESAEIRIAKVAITNVSLWAGIWXPYXLVVLXAVLGSKSSITPLVSQLPSFIAKTASCINPLVYAVSHPKYREALM 349
BLAST of c-opsin vs. L. salmonis genes
Match: EMLSAG00000010390 (supercontig:LSalAtl2s:LSalAtl2s68:1171681:1173265:1 gene:EMLSAG00000010390 transcript:EMLSAT00000010390 description:"maker-LSalAtl2s68-augustus-gene-11.5") HSP 1 Score: 91.6633 bits (226), Expect = 4.739e-20 Identity = 69/292 (23.63%), Postives = 138/292 (47.26%), Query Frame = 0
Query: 148 VYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFI-ISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQR-CLLVSQYGQIDLHSKRTAAMILITIWTLSLAMALPPLMG-WAFYAPESSGMSCAPSWETPE--NQTYNFYLIIFGFFAPLILLFFSSGSVLR-------TMQRNTSQLQTMIGRKS----AHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQ--VSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALI 421
+ F + GNG +I F K L+TP N+ ++NL +S+ I +++ G P+ + R W G C G + + G+ SI T+ + R ++V + + + + A +I+++IW S+A++ L W Y E +C+ + T + N +Y + F + P+ L+FF S+++ T+++ ++ R + A E ++ + + + + WSPY ++ L + G + + P S P K++ C NP++Y + +R+AL+
Sbjct: 65 IMFFFLWLMNFFGNGLVIFIFSKVKSLRTPTNMFVINLAISDLIMMTSMGPPVTINIFLQRYWAWGVFGCKLYGCVGAVCGVVSILTMVVIGYDRYNVIVKGFNGTKITAGK-ALIIIMSIWGYSIAISALALFDIWGGYTVEGLLFTCSYDYLTDDANNVSYILFTCFFMYLLPMSLVFFFYSSIVKAVWAHEMTLKQQAKKMNVESLRSNVDTHAESAEIRIAKVAVTNVSLWAGIWSPYTIVVLMAVMGSKSSIXPLISQLPSFIAKTASCLNPMVYAMSHPKYREALM 355
BLAST of c-opsin vs. L. salmonis genes
Match: EMLSAG00000003196 (supercontig:LSalAtl2s:LSalAtl2s1777:8393:16679:-1 gene:EMLSAG00000003196 transcript:EMLSAT00000003196 description:"maker-LSalAtl2s1777-augustus-gene-0.1") HSP 1 Score: 84.3445 bits (207), Expect = 2.279e-19 Identity = 40/117 (34.19%), Postives = 69/117 (58.97%), Query Frame = 0
Query: 305 YNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALI 421
Y Y++I GF P + ++S S++ M++ + + RK+ R++++N MVL+M+ F CW PYA +S+Y++ G V + FP+ F KS +C NP IY+ MN F+ ++
Sbjct: 2 YLVYILILGFIIPSFIFMYTSFSIICCMKKTMLE-HRVPKRKNTQDRKSRINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKEMV 117
BLAST of c-opsin vs. L. salmonis genes
Match: EMLSAG00000005061 (supercontig:LSalAtl2s:LSalAtl2s264:303145:304233:1 gene:EMLSAG00000005061 transcript:EMLSAT00000005061 description:"augustus_masked-LSalAtl2s264-processed-gene-3.0") HSP 1 Score: 88.9669 bits (219), Expect = 2.572e-19 Identity = 71/293 (24.23%), Postives = 134/293 (45.73%), Query Frame = 0
Query: 148 VYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFI-ISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQR-CLLVSQYGQIDLHSKRTAAMILITIWTLSLAMALPPLMG-WAFYAPESSGMSCAPSWETPE--NQTYNFYLIIFGFFAPLILLFFSSGSVLRTM------------QRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQ--VSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALI 421
V F + +GNG +I F K L+TP N+ ++NL +S+ + ++ G + + R W G C G I + G+ SI T+ + R ++V + + A+IL+ IW S+A++ L W Y E +C+ + T + N TY + F + P+ L+FF S+++ + + N L+T + +A E ++ + + + + W+P L+ L + G + ++P S P K++ C NP++Y + +R+AL+
Sbjct: 47 VMFFFLWVMNFVGNGLVIFIFSKVKSLRTPSNMFVINLALSDLLMMTTMGPAVTVNVFMQRYWAWGVFGCKLYGCIGAICGVVSILTMVVIGYDRYNVIVKGLNGFRISVGKALAIILV-IWAYSIAISALALFDIWGGYTVEGLLFTCSYDYLTDDANNTTYILFTFFFMYVLPMSLVFFFYSSIVKAVWAHEMALKQQAKKMNVESLRTNV-DSNAESAEIRIAKVAVTNVSLWAGIWTPXXLVVLXAVMGSRSSITPLVSQLPSFIAKTASCLNPMVYAMSHPKYREALM 337
BLAST of c-opsin vs. L. salmonis genes
Match: EMLSAG00000002544 (supercontig:LSalAtl2s:LSalAtl2s1500:31075:41981:1 gene:EMLSAG00000002544 transcript:EMLSAT00000002544 description:"maker-LSalAtl2s1500-augustus-gene-0.3") HSP 1 Score: 82.4185 bits (202), Expect = 8.823e-19 Identity = 40/117 (34.19%), Postives = 68/117 (58.12%), Query Frame = 0
Query: 305 YNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALI 421
Y Y++ GF P + ++S S++ M++ + + RK+A R+ ++N MVL+M+ F CW PYA +S+Y++ G V + FP+ F KS +C NP IY+ MN F+ ++
Sbjct: 2 YLVYILTVGFIIPSFIFMYTSFSIICCMKKTMLE-HRVPKRKNAQDRKARINRMVLLMVLCFQVCWFPYAFVSMYRVFIGDVPVIYTVFPVQFAKSGVCWNPFIYIIMNKEFKKQMV 117
BLAST of c-opsin vs. L. salmonis genes
Match: EMLSAG00000008514 (supercontig:LSalAtl2s:LSalAtl2s524:372727:374931:1 gene:EMLSAG00000008514 transcript:EMLSAT00000008514 description:"snap_masked-LSalAtl2s524-processed-gene-3.5") HSP 1 Score: 80.4925 bits (197), Expect = 1.456e-16 Identity = 35/82 (42.68%), Postives = 56/82 (68.29%), Query Frame = 0
Query: 146 ASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVG 227
A YL ++G G + N II F+ ++++PFN++++NLIV+EF++S +G+P+DF +S RGWK G C GF+LT +G
Sbjct: 221 ACFYLALVGFIGCLCNSFIIFVFLRIPKVRSPFNILILNLIVAEFVVSFFGIPVDFLSSFNRGWKYGEGFCKVVGFVLTAMG 302
BLAST of c-opsin vs. L. salmonis genes
Match: EMLSAG00000003687 (supercontig:LSalAtl2s:LSalAtl2s1:1117397:1240427:-1 gene:EMLSAG00000003687 transcript:EMLSAT00000003687 description:"maker-LSalAtl2s1-snap-gene-13.14") HSP 1 Score: 66.2402 bits (160), Expect = 1.041e-11 Identity = 50/200 (25.00%), Postives = 93/200 (46.50%), Query Frame = 0
Query: 159 IGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRG-WKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQ---YGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWETPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENK 354
IGN ++I+A + +LQT N +++L ++F++ + +P + + G W +G LC A + L+ +SI +L +S+ R L +SQ Y + L +K I+ +W LS + PP+ + P + C E Y Y F+ PLI++ ++ G ++ ++ T M G + N+
Sbjct: 24 IGNSTVIMAILTVPRLQTITNYFILSLGFADFLVGLFVLPAAISLHMTEGVWVLGWILCDAWISMDILLCTASILSLCAISIDRYLAISQPFRYSK-RLRTKGLVMKIIAAVWILSAVITCPPMSEPNRHGPNLT--EC----HYNEKPGYIVYSACGTFYVPLIVILYTYGRIVVVVKERTKYFVDMQGGTEGRQTSNQ 216
BLAST of c-opsin vs. L. salmonis genes
Match: EMLSAG00000007798 (supercontig:LSalAtl2s:LSalAtl2s457:44439:45841:-1 gene:EMLSAG00000007798 transcript:EMLSAT00000007798 description:"maker-LSalAtl2s457-snap-gene-0.38") HSP 1 Score: 64.3142 bits (155), Expect = 3.309e-11 Identity = 52/204 (25.49%), Postives = 101/204 (49.51%), Query Frame = 0
Query: 160 GNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGW---KMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVS--QYGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWETPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLM 358
GN +++AF K++L+ N +++L ++ +I +P+ F+ IL G+ ++G LC I V + S T+ +++ R V + QI + + +I+I W +S + P+ GW + + + + ++ +N LII F+ PLI+L + GS+ RT + +KS +KRE+++NL+
Sbjct: 66 GNFLVLIAFGVKQKLRESKNFFIVSLAFTDLLIGMISLPL-FSVYILVGFWPPQLGPILCDLWLSIDHTVCLVSQLTVLSITIDRFCSVRFPAHYQI-IKDRNKTILIIIGTWAISALIFFIPIFGWEHFIDKRDLLPGECKVQFLKDPLFNTSLIICYFWIPLIILIYLYGSIYRTAW--------TLSKKSMNKRESRLNLL 259
BLAST of c-opsin vs. L. salmonis genes
Match: EMLSAG00000010147 (supercontig:LSalAtl2s:LSalAtl2s670:157050:162967:1 gene:EMLSAG00000010147 transcript:EMLSAT00000010147 description:"maker-LSalAtl2s670-snap-gene-1.5") HSP 1 Score: 63.929 bits (154), Expect = 3.782e-11 Identity = 73/302 (24.17%), Postives = 122/302 (40.40%), Query Frame = 0
Query: 161 NGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRG-WKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQYGQIDLHSKRTAAMILITIWTLSLA-----------------MALPPLMGWAFYAPESSGMSCAPSWET-PEN-------QTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIG-SFIFCWSPYAL-MSLYQMCGGQVSPYTSAFPMLFCK----SSICTNPVIYVAMNSTFR---DALIPSGFRR 427
N ++I + ++ + P N+ ++NL VS I+S + VP + G W MG C I + S +T+T ++V R L V D S + +++I +W +S + LP + + GM E EN ++ +++F + PLI+L G +L ++ N S Q+ RK + N+ +VL I F W P L + + + +V T + C S+ TNPV+Y N+ R + LIP RR
Sbjct: 64 NAALIYVILLSRETRNPRNVYILNLAVSGIIMSVFCVPPTLLQILYGGVWHMGVIACKLVPVIQGTNILVSAFTITVIAVDRWLSVMNTNPRDSQSYISVTLVVIGVWMISFTGYNFFQCFLCSQDELFILYLPIVTSPLLFFQTLEGMDFPIKMEICTENFPKEIYKSSFTLIILLFQYLMPLIVLPIVHGKILNFLRAN-SGFQSDERRKEREMKRNRKMTLVLSFISIIFAISWLPLHLYLIITDLYSIEVDQETYYLFLGLCHSLGLSTSFTNPVLYGWFNTNLRSELEKLIPLCCRR 364
BLAST of c-opsin vs. L. salmonis genes
Match: EMLSAG00000009433 (supercontig:LSalAtl2s:LSalAtl2s601:31744:33432:-1 gene:EMLSAG00000009433 transcript:EMLSAT00000009433 description:"augustus_masked-LSalAtl2s601-processed-gene-1.0") HSP 1 Score: 62.003 bits (149), Expect = 3.104e-10 Identity = 46/189 (24.34%), Postives = 88/189 (46.56%), Query Frame = 0
Query: 160 GNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQ---YGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWA-----FYAPESSGMSCAPSWETPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQ 340
GN +I A ++L+ NL +++L ++ ++ +P + W G C+ + + +SI L +S+ R + V+ Y I + SKR A ++++ W LS + PPL+GW F +S SC P + + Y Y + F+AP++++ F + + RT + T ++
Sbjct: 44 GNMMVIAAVHMTQKLRGATNLFIVSLAWADLMLGIIVLPTSAMYEVFHIWIFGVHWCAIWLAVDVWMCTASILHLVVISLDRYIAVTHPVTYPNI-MSSKR-AKLLILGAWVLSFVICFPPLVGWNEDEDLFDENKSEDNSCMPECKLIQEPGYVIYSAVGSFYAPMLVMIFFNYKIYRTATKTTKAIR 230
BLAST of c-opsin vs. SwissProt
Match: gi|3024317|sp|O42490.1|OPSP_PETMA (RecName: Full=Pineal opsin; AltName: Full=Pineal gland-specific opsin; Short=P-opsin) HSP 1 Score: 158.688 bits (400), Expect = 4.281e-41 Identity = 111/372 (29.84%), Postives = 179/372 (48.12%), Query Frame = 0
Query: 138 LPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQ-YGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWETPENQTYNFYLIIFG--FFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSL-YQMCGG-QVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFRRKDLNSVHST----------LRSFQRVKPSKRVKIRPKLDELKSKRLSTISGCIETSVQTEVHAKPKQNQANDFGYPP 494
+ PW F + + I + N ++I+ +QL+ P N VL+NL ++ ++SA G + F +I + +G C GF +T G+ ++++L L+ +R ++ + G L SK A + L +W SLA LPP++GW+ Y P G +C P+W + E + F L+ F F PL ++FFS G +++ +++ + +T G +S + E +V MV+VMI +F+ CW PYA S+ C + P +A P F K++ NPVIY+ MN FRD + K L V +T S P R I L+ +G + S T V +P + A G PP
Sbjct: 42 IAPWNFTMLAALMGTITALSLGENFAVIVVTARFRQLRQPLNYVLVNLAAADLLVSAIGGSVSFFTNIKGYFFLGVHACVLEGFAVTYFGVVALWSLALLAFERYFVICRPLGNFRLQSKH-AVLGLAVVWVFSLACTLPPVLGWSSYRPSMIGTTCEPNWYSGELHDHTFILMFFSTCFIFPLAVIFFSYGKLIQKLKKAS---ETQRGLESTRRAEQQVTRMVVVMILAFLVCWMPYATFSIVVTACPTIHLDPLLAAVPAFFSKTATVYNPVIYIFMNKQFRDCFV-QVLPCKGLKKVSATQTAGAQDTEHTASVNTQSPGNRHNIALAAGSLR------FTGAVAPSPATGV-VEPTMSAAGSMGAPP 401
BLAST of c-opsin vs. SwissProt
Match: gi|82241951|sp|Q804Q2.1|OPN4B_GADMO (RecName: Full=Melanopsin-B; AltName: Full=Opsin-4B) HSP 1 Score: 160.229 bits (404), Expect = 1.609e-40 Identity = 99/310 (31.94%), Postives = 166/310 (53.55%), Query Frame = 0
Query: 128 LDWEYGY--APDLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQYGQ-IDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWE----TPENQTYNFYLIIFGFFAPL-------ILLFFSSGSVLRTMQRNTSQLQ-TMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMC--GGQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDAL 420
+D + G+ D+P + ++ IIG G+ GN ++ AF+C K+L+TP N +MNL VS+F+++ PI F S+ + W G C F L G++S+ L +S+ R +++++ Q I S R ++++ +W SLA +L PL+GW+ Y PE SC +W+ TP N+ Y L F FF PL + +F + S R ++R +Q++ + + ++ K E K+ + V+I ++ WSPYA ++L G +SPY+ A P + K+S NP IY ++S +RD L
Sbjct: 1 MDMDRGFYRKVDVPDHAHYVIAFFVLIIGVVGVTGNALVMYAFLCNKKLRTPPNYFIMNLAVSDFLMAITQSPIFFINSLFKEWIFGETGCRMYAFCGALFGITSMINLLAISLDRYIVITKPPQAIRWVSGRRTMVVILLVWLYSLAWSLAPLLGWSSYIPEGLMTSC--TWDYVTSTPANKGYTLMLCCFVFFIPLGIISYCYLCMFLAIRSAGREIERLGTQVRKSTLMQQQTIKTEWKLTKVAFVVIIVYVHSWSPYACVTLIAWAGYGSHLSPYSKAVPAVIAKASAIYNPFIYAIIHSKYRDTL 308
BLAST of c-opsin vs. SwissProt
Match: gi|122064642|sp|Q4U4D2.2|OPN4_PODSI (RecName: Full=Melanopsin; AltName: Full=Opsin-4) HSP 1 Score: 155.992 bits (393), Expect = 6.501e-40 Identity = 130/450 (28.89%), Postives = 207/450 (46.00%), Query Frame = 0
Query: 137 DLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQR-CLLVSQYGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWE----TPENQTYNFYLIIFGFFAPLILLFFS---SGSVLRTMQRNTSQLQTMIGRKS----AHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCG--GQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFRRKDLNSVHSTLRSFQRVKPSKRVKIRPKLDELKSKRLSTISGCIETSVQTEVHAKPKQN-----QANDFGYPPMEQGPLIAPQDIGSEPPQLGLSKVSEVEDGCACKQILISSLLEAQHVQANSMGTFKYYSQYNGKPYYYSYGHN 567
D+P + + +IG+ GI GN ++ AF K+L+TP N +MNL S+F++SA PI F S+ W +G C+ F L G++S+ TL +SV R C++ I SK+ + +I+ +W SL ++ PL GW+ Y PE +SC +W+ +P N++Y L F FF PLI++F +R+ RN +L + RKS + K E K+ + V I F+ WSPYA ++L G ++PY+ + P + K+S NP+IY A+I +RR T+RS P R IR +L + ++ S S + A+ K + A + + ME P+ A + SK +E E G K ++L + V +S+ P+ S+G N
Sbjct: 10 DVPDRVLYTVGSCVLVIGSIGITGNLLVLYAFYSNKRLRTPANYFIMNLAASDFLMSATQAPICFLNSMHTEWILGDIGCNFYVFCGALFGITSMMTLLAISVDRYCVITKPLQSIKRSSKKRSCIIIAFVWLYSLGWSVCPLFGWSSYIPEGLMISC--TWDYVSYSPANRSYTMMLCCFVFFIPLIIIFHCYLFMFLAIRSTGRNVQKLGSTYNRKSNVSQSVKSEWKLAKIAFVAIVVFVLSWSPYACVTLIAWAGYAKTLNPYSKSVPAVIAKASAIYNPIIY---------AIIHPRYRR--------TIRS---AVPCLRFLIRISPSDLSTSSVNESSFRASMSSRHSFAARNKSSCVSSISAAETTWSDMELEPVEAARKKQQPHRSRSFSKQAEEETGLLLKT-QSCNVLTGEKVAVSSISLH--------DPFERSFGEN 428
BLAST of c-opsin vs. SwissProt
Match: gi|60392870|sp|Q9W6A6.2|OPSG4_DANRE (RecName: Full=Green-sensitive opsin-4; AltName: Full=Green cone photoreceptor pigment 4; AltName: Full=Opsin RH2-4; AltName: Full=Opsin-1, medium-wave-sensitive 4) HSP 1 Score: 152.91 bits (385), Expect = 6.830e-40 Identity = 99/316 (31.33%), Postives = 166/316 (52.53%), Query Frame = 0
Query: 121 EKKGVNQLDWEYGYAPDLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQ-YGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWET--PE--NQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMS--LYQMCGGQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFRRKD 429
+ G+ + +EY PW F +VY+F + G NG +L K+L+ P N +L+NL V+ I+ +G + F +I + +G C+ GF+ TL G ++++L L+V+R ++V + G + A T W +++A A PPL+GW+ Y PE SC P + T PE N++Y Y+ I F P+ ++FF+ G ++ T++ +Q Q +S K E +V MV++M+ F+ W+PYA ++ ++ G S A P F K+S NPVIYV +N FR+ ++ + F K+
Sbjct: 15 NRTGLARSPYEYPQYYLAEPWQFKLLAVYMFFLICLGFPINGLTLLVTAQHKKLRQPLNFILVNLAVAGTIMVCFGFTVTFYTAINGYFVLGPTGCAIEGFMATLGGEVALWSLVVLAVERYIVVCKPMGSFKFSASHAFAGCAFT-WVMAMACAAPPLVGWSRYIPEGMQCSCGPDYYTLNPEYNNESYVLYMFICHFILPVTIIFFTYGRLVCTVKAAAAQQQE---SESTQKAEREVTRMVILMVLGFLIAWTPYATVAAWIFFNKGAAFSAQFMAVPAFFSKTSALYNPVIYVLLNKQFRNCMLTTLFCGKN 326
BLAST of c-opsin vs. SwissProt
Match: gi|3024254|sp|O15973.1|OPSD1_MIZYE (RecName: Full=Rhodopsin, GQ-coupled; AltName: Full=GQ-rhodopsin) HSP 1 Score: 153.68 bits (387), Expect = 6.445e-39 Identity = 96/309 (31.07%), Postives = 165/309 (53.40%), Query Frame = 0
Query: 127 QLDWEYGYAPDLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAY-GVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQYGQI-DLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSW--ETPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMI------GRKSAHKR---ENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQ--VSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDAL 420
L W + P W +I VY+ I+G GI+GN +++ F K L++P NL ++NL VS+ I SA G P+ +S + W G+ C GF+ + G+ SI TLT +S+ R +++++ Q ++R ++++ +W LS+ +++PP GW Y PE SC + +T +TY L +FGF PLI++ ++R ++R+ ++ T+ ++ +KR E +++ + + + FI WSPYA+++L G ++P S PM+ KSS NPV+Y + FR AL
Sbjct: 37 HLHWTQ-FPPVTEEWHYI-IGVYITIVGLLGIMGNTTVVYIFSNTKSLRSPSNLFVVNLAVSDLIFSAVNGFPLLTVSSFHQKWIFGSLFCQLYGFVGGVFGLMSINTLTAISIDRYVVITKPLQASQTMTRRKVHLMIVIVWVLSILLSIPPFFGWGAYIPEGFQTSCTFDYLTKTARTRTYIVVLYLFGFLIPLIIIGVCYVLIIRGVRRHDQKMLTITRSMKTEDARANNKRARSELRISKIAMTVTCLFIISWSPYAIIALIAQFGPAHWITPLVSELPMMLAKSSSMHNPVVYALSHPKFRKAL 343
BLAST of c-opsin vs. SwissProt
Match: gi|60392866|sp|Q8AYM7.1|OPSG3_DANRE (RecName: Full=Green-sensitive opsin-3; AltName: Full=Green cone photoreceptor pigment 3; AltName: Full=Opsin RH2-3; AltName: Full=Opsin-1, medium-wave-sensitive 3) HSP 1 Score: 150.214 bits (378), Expect = 6.672e-39 Identity = 99/316 (31.33%), Postives = 166/316 (52.53%), Query Frame = 0
Query: 121 EKKGVNQLDWEYGYAPDLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQ-YGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWET--PE--NQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMS--LYQMCGGQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFRRKD 429
+ G+ + +EY PW F +VY+F + FG NG ++ K+L+ P N +L+NL V+ I+ +G + F +I + +G C+ GF+ TL G S+++L L+++R ++V + G S A I T W ++L+ A PPL+GW+ Y PE SC P + T P+ N++Y Y+ F P+ +FF+ G ++ T++ +Q Q +S K E +V MV++M+ F+ W+PYA ++ ++ G S A P F KSS NP+IYV +N FR+ ++ + F K+
Sbjct: 15 NRTGLVRSPYEYPQYYLAEPWQFKLLAVYMFFLMCFGFPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFGFTVTFYTAINGYFVLGPTGCAIEGFMATLGGQISLWSLVVLAIERYIVVCKPMGSFKFSSNHAFAGIGFT-WIMALSCAAPPLVGWSRYIPEGMQCSCGPDYYTLNPDYNNESYVLYMFCCHFIFPVTTIFFTYGRLVCTVKAAAAQQQE---SESTQKAEREVTRMVILMVLGFLVAWTPYASVAAWIFFNRGAAFSAQFMAVPAFFSKSSSIFNPIIYVLLNKQFRNCMLTTLFCGKN 326
BLAST of c-opsin vs. SwissProt
Match: gi|417423|sp|P32312.1|OPSG2_CARAU (RecName: Full=Green-sensitive opsin-2; AltName: Full=Green cone photoreceptor pigment 2) HSP 1 Score: 149.443 bits (376), Expect = 1.316e-38 Identity = 97/316 (30.70%), Postives = 165/316 (52.22%), Query Frame = 0
Query: 121 EKKGVNQLDWEYGYAPDLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQ-YGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWET--PE--NQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMS--LYQMCGGQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFRRKD 429
+ G+ + +EY PW F +VY+F + G+ NG ++ K+L+ P N +L+NL V+ I+ +G + F +I + +G C+ GF+ TL G ++++L L+++R ++V + G S +A I T W +++A A PPL+GW+ Y PE SC P + T PE N++Y Y+ I F P+ ++FF+ G ++ T++ + S K E +V MV++M+ F+ W+PYA ++ ++ G S A P F K+S NPVIYV +N FR ++ + F K+
Sbjct: 15 NRTGLVRSPFEYPQYYLAEPWQFKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFGFTVTFYTAINGYFALGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGSFKFSSTHASAGIAFT-WVMAMACAAPPLVGWSRYIPEGIQCSCGPDYYTLNPEYNNESYVLYMFICHFILPVTIIFFTYGRLVCTVK---AAAAQQQDSASTQKAEREVTKMVILMVLGFLVAWTPYATVAAWIFFNKGAAFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFCGKN 326
BLAST of c-opsin vs. SwissProt
Match: gi|81910392|sp|Q5XXP2.1|OPN4_PHOSU (RecName: Full=Melanopsin; AltName: Full=Opsin-4) HSP 1 Score: 152.14 bits (383), Expect = 1.470e-38 Identity = 89/285 (31.23%), Postives = 160/285 (56.14%), Query Frame = 0
Query: 150 LFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQ-YGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWE----TPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQL-----QTMIGRKSAHK--RENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQ--VSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDAL 420
+ ++G G++GN ++I F + L+TP N++++NL VS+F++S P+ F +S+ + W G C F ++G++S+ TLT +++ R L++++ I + SKR A++L+ IW +LA +LPP GW+ Y PE SC SW+ TP+ + Y L F FF PL+++ F S+ R + R T + ++ R+ H+ E K+ + L++I F+ W+PY+ ++L G ++PY S+ P + K+S NP++Y + +R A+
Sbjct: 76 ILLVGLTGMLGNLTVIYTFCRSRSLRTPANMLIINLAVSDFLMSFTQAPVFFASSLYKKWLFGETGCEFYAFCGAVLGITSMITLTAIALDRYLVITRPLATIGMGSKRRTALVLLGIWLYALAWSLPPFFGWSAYVPEGLLTSC--SWDYVTFTPQVRAYTMLLFCFVFFLPLLVIIFCYISIFRAI-RETGRACEGWSESPQRRRQWHRLQSEWKMAKVALIVILLFVLSWAPYSTVALVAFAGYSHILTPYMSSVPAVIAKASAIHNPIVYAITHPKYRAAI 357
BLAST of c-opsin vs. SwissProt
Match: gi|122064639|sp|Q1JPS6.1|OPN4L_DANRE (RecName: Full=Melanopsin-like; AltName: Full=Melanopsin; AltName: Full=Opsin-4-like) HSP 1 Score: 152.14 bits (383), Expect = 2.202e-38 Identity = 90/283 (31.80%), Postives = 148/283 (52.30%), Query Frame = 0
Query: 150 LFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQ-YGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWE----TPENQTYNFYLIIFGFFAPLILL---FFSSGSVLRTMQRNTSQLQTMIGRKSAHKREN--KVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQ--VSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDAL 420
+ I+G G+IGN ++ F + L+T N+ ++NL V++F++S P+ F AS+ R W G C F L G+ S+ TLT ++ RCL ++Q + S+R A +L+ +W SL +LPP GW+ Y PE SC SW+ TP + Y L +F FF PL ++ +F+ +R + +L K + +N K+ + LV+I FI WSPY++++L G ++PY ++ P + K+S NP+IY + +R A+
Sbjct: 71 ILIVGITGVIGNALVVYVFCRSRTLRTAGNMFIVNLAVADFLMSVTQSPVFFAASLHRRWVFGERPCELYAFCGALFGICSMMTLTAIAADRCLAITQPLALVSRVSRRKAGAVLVVVWLYSLGWSLPPFFGWSAYVPEGLQTSC--SWDYMTFTPSVRAYTILLFVFVFFIPLGIIGSCYFAIFQTIRAAGKEIRELDCGETHKVYERMQNEWKMAKVALVVIVLFIISWSPYSVVALTATAGYSHFLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRVAI 351
BLAST of c-opsin vs. SwissProt
Match: gi|109939736|sp|Q63652.2|OPSB_RAT (RecName: Full=Short-wave-sensitive opsin 1; Short=S opsin; AltName: Full=Blue cone photoreceptor pigment; AltName: Full=Blue-sensitive opsin; Short=BOP; AltName: Full=Short wavelength-sensitive cone opsin) HSP 1 Score: 148.288 bits (373), Expect = 2.925e-38 Identity = 90/296 (30.41%), Postives = 156/296 (52.70%), Query Frame = 0
Query: 139 PPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQ-YGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWETP----ENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQVSPYTS--AFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFRR 427
P W F + ++ + G N ++++A + K+L+ P N +L+N+ + F+ + V F AS + G +C+ F+ ++ G+ + ++L L+ +R L++ + +G I +SK ++LIT WT+ + +++PP GW+ + PE SC P W T ++ Y ++L IF F PL L+ FS +LRT++ +Q Q + K E +V+ MV+VM+GSF C+ PYA +++Y + Y P F KSS NP+IY MN FR ++ R+
Sbjct: 28 PVWAFHLQAAFMGFVFFAGTPLNATVLVATLHYKKLRQPLNYILVNVSLGGFLFCIFSVFTVFIASCHGYFLFGRHVCALEAFLGSVAGLVTGWSLAFLAFERYLVICKPFGNIRFNSKHALTVVLIT-WTIGIGVSIPPFFGWSRFIPEGLQCSCGPDWYTVGTKYRSEHYTWFLFIFCFIIPLSLICFSYFQLLRTLRAVAAQQQE---SATTQKAEREVSHMVVVMVGSFCLCYVPYAALAMYMVNNRNHGLYLRLVTIPAFFSKSSCVYNPIIYCFMNKQFRACILEMVCRK 319
BLAST of c-opsin vs. nr
Match: gi|1004400860|gb|KYB28034.1| (Opsin Rh3-like Protein [Tribolium castaneum]) HSP 1 Score: 212.616 bits (540), Expect = 2.901e-59 Identity = 122/336 (36.31%), Postives = 205/336 (61.01%), Query Frame = 0
Query: 131 EYGYAPDLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQYGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWE--TPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQ--VSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFR-RKDLNSVHSTLRSFQRVKPSKRVKIRPKLDELKSK 461
E G +P +I A+V LF IG FG N ++I+ + ++QL +P N++L NL+VS+F++S G P F ++I GW G C+ GFI++L+G++SI TLT L+ +R LL+++ + + + +AA+ + +IW SL++ +PPL+GW Y E++ +SC+ +WE +P + +Y YL FG F PL+++ FS +++ TM+RN + +G+ S K ENKV M+ +MI +F+ WSPYA+M+L G V+P + P L KSSIC NPVIY+ +N+ F+ A + + R+ +++ ++ + + + R + KL E K+K
Sbjct: 8 EIGDELLIPVEGYIAAAVVLFCIGFFGFSLNLTVIIFMLKERQLWSPLNIILFNLVVSDFLVSVLGNPWTFFSAINYGWIFGETGCTIYGFIMSLLGITSITTLTVLAFERYLLIARPFRNNALNFHSAALSVFSIWLYSLSLTIPPLIGWGEYVHEAANLSCSVNWEEKSPNSTSYILYLFAFGLFLPLVIITFSYVNIILTMRRNAA---FRVGQVS--KAENKVAYMIFIMIIAFLTAWSPYAIMALIVQFGDAALVTPGMAVIPALLAKSSICYNPVIYIGLNAQFQQAWMQKWKKNRRGSDALGTSRVMLETIHQACRDEKTDKLLEKKTK 338
BLAST of c-opsin vs. nr
Match: gi|224458334|ref|NP_001138950.1| (c-opsin [Tribolium castaneum] >gi|68271039|gb|AAY89040.1| c-opsin [Tribolium castaneum]) HSP 1 Score: 212.231 bits (539), Expect = 5.133e-59 Identity = 122/336 (36.31%), Postives = 205/336 (61.01%), Query Frame = 0
Query: 131 EYGYAPDLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQYGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWE--TPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQ--VSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFR-RKDLNSVHSTLRSFQRVKPSKRVKIRPKLDELKSK 461
E G +P +I A+V LF IG FG N ++I+ + ++QL +P N++L NL+VS+F++S G P F ++I GW G C+ GFI++L+G++SI TLT L+ +R LL+++ + + + +AA+ + +IW SL++ +PPL+GW Y E++ +SC+ +WE +P + +Y YL FG F PL+++ FS +++ TM+RN + +G+ S K ENKV M+ +MI +F+ WSPYA+M+L G V+P + P L KSSIC NPVIY+ +N+ F+ A + + R+ +++ ++ + + + R + KL E K+K
Sbjct: 8 EIGDELLIPVEGYIAAAVVLFCIGFFGFSLNLTVIIFMLKERQLWSPLNIILFNLVVSDFLVSVLGNPWTFFSAINYGWIFGETGCTIYGFIMSLLGITSITTLTVLAFERYLLIARPFRNNALNFHSAALSVFSIWLYSLSLTIPPLIGWGEYVHEAANLSCSVNWEEKSPNSTSYILYLFAFGLFLPLVIITFSYVNIILTMRRNAA---FRVGQVS--KAENKVAYMIFIMIIAFLTAWSPYAIMALIVQFGDAALVTPGMAVIPALLAKSSICYNPVIYIGLNAQFQQAWMQKWKKNRRGSDALGTSGVMLETIHQACRDEKTDKLLEKKTK 338
BLAST of c-opsin vs. nr
Match: gi|1008434944|ref|XP_015834291.1| (PREDICTED: c-opsin isoform X1 [Tribolium castaneum]) HSP 1 Score: 211.846 bits (538), Expect = 1.694e-57 Identity = 122/336 (36.31%), Postives = 205/336 (61.01%), Query Frame = 0
Query: 131 EYGYAPDLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQYGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWE--TPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGGQ--VSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFR-RKDLNSVHSTLRSFQRVKPSKRVKIRPKLDELKSK 461
E G +P +I A+V LF IG FG N ++I+ + ++QL +P N++L NL+VS+F++S G P F ++I GW G C+ GFI++L+G++SI TLT L+ +R LL+++ + + + +AA+ + +IW SL++ +PPL+GW Y E++ +SC+ +WE +P + +Y YL FG F PL+++ FS +++ TM+RN + +G+ S K ENKV M+ +MI +F+ WSPYA+M+L G V+P + P L KSSIC NPVIY+ +N+ F+ A + + R+ +++ ++ + + + R + KL E K+K
Sbjct: 139 EIGDELLIPVEGYIAAAVVLFCIGFFGFSLNLTVIIFMLKERQLWSPLNIILFNLVVSDFLVSVLGNPWTFFSAINYGWIFGETGCTIYGFIMSLLGITSITTLTVLAFERYLLIARPFRNNALNFHSAALSVFSIWLYSLSLTIPPLIGWGEYVHEAANLSCSVNWEEKSPNSTSYILYLFAFGLFLPLVIITFSYVNIILTMRRNAA---FRVGQVS--KAENKVAYMIFIMIIAFLTAWSPYAIMALIVQFGDAALVTPGMAVIPALLAKSSICYNPVIYIGLNAQFQQAWMQKWKKNRRGSDALGTSRVMLETIHQACRDEKTDKLLEKKTK 469
BLAST of c-opsin vs. nr
Match: gi|1133416271|ref|XP_019881013.1| (PREDICTED: parapinopsin-like [Aethina tumida] >gi|1133416273|ref|XP_019881014.1| PREDICTED: parapinopsin-like [Aethina tumida] >gi|1133416275|ref|XP_019881015.1| PREDICTED: parapinopsin-like [Aethina tumida] >gi|1133416277|ref|XP_019881016.1| PREDICTED: parapinopsin-like [Aethina tumida]) HSP 1 Score: 206.068 bits (523), Expect = 2.516e-56 Identity = 119/361 (32.96%), Postives = 201/361 (55.68%), Query Frame = 0
Query: 138 LPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQ-YGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSW--ETPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGG--QVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFRRKDLNSVHSTLRSFQRVKPSKRVKIRPKLDE-LKSKRLSTISGCIETSVQTEV----HAKPKQNQAN 488
+P + +I A++ L IG FG + N +I+ + K + TP N++L NL+ S+F +S +G P F +++ W G +C A GF ++L+G+SSI TLT L+ +R ++V + + L S R + +L+ IW S + +PPL+GW Y ES+ +SC+ +W ++ +TY YL +FG PLIL+ FS +++RT+++NT + + K EN+V MVL+M+ +F+F W+PYA++SL +SP S P L KSSIC NP+IYV MN+ + + + + +++ + S+ + + L E KSK++ + G T+ + H K ++N N
Sbjct: 29 MPKYGYILAAIALTFIGVFGFVLNLIVIILMVKNKLVNTPLNIILFNLVCSDFSVSVFGNPFTFLSAVHHRWLWGETMCQAYGFFMSLLGISSITTLTVLAFERYMIVCHSFSKYSL-SNRGSIYVLVCIWIYSCFLTVPPLVGWGKYVAESANISCSVNWHEKSMNAKTYIIYLFVFGLKIPLILIIFSYANIIRTIKKNT------LTKGHVTKAENRVAYMVLIMVLAFLFAWTPYAIISLIAQFSDVSLISPGMSVIPALIAKSSICYNPIIYVGMNTQLKKTFMNMLHIETNAACIDVNSQTYTTMGTSRCISVLVHLTEDRKSKQMRKMMGERYTNDNCGLSVVDHCKKEENNEN 382
BLAST of c-opsin vs. nr
Match: gi|939262016|ref|XP_014250922.1| (pinopsin-like [Cimex lectularius]) HSP 1 Score: 189.504 bits (480), Expect = 8.576e-51 Identity = 107/286 (37.41%), Postives = 170/286 (59.44%), Query Frame = 0
Query: 138 LPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQ-LQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQYGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWETP--ENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSL-YQMCGGQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDA 419
+ P ++ ASV LFIIG G N I++ +C+ Q L TP N +L NLI+S+F +S G P +++I W G +C A GF + L+G+ SI TLT L+++R L+VS+ S R A ++ IW + + +PPL+GW Y PE++ +SC+ +WET + +Y YL + GFF PL ++ FS +++RTM++++ + K E++V LM+ VMI +F+ W+PYA+ +L +VSP + P +F K+SIC NP IYV +N+ F+ +
Sbjct: 7 MTPGAYVLASVILFIIGFVGFFAN-LIVIVMMCRDQRLWTPLNYILFNLIISDFTVSILGNPFTLSSAIAMQWIFGHAMCIAYGFFMALLGIGSISTLTVLALERYLMVSRPLNRCALSSRAAISLVGGIWIYAGFVTVPPLLGWGEYGPEAANLSCSVNWETRGHNSTSYIIYLFVLGFFIPLFVICFSYINIIRTMKKSS------LAMGGVSKAESRVVLMIAVMILAFLIAWTPYAIFALIVAFLDLEVSPALATVPAVFAKTSICYNPFIYVGLNTQFKQS 285
BLAST of c-opsin vs. nr
Match: gi|985412977|ref|XP_015372008.1| (PREDICTED: rhodopsin-like [Diuraphis noxia] >gi|985412979|ref|XP_015372009.1| PREDICTED: rhodopsin-like [Diuraphis noxia]) HSP 1 Score: 190.274 bits (482), Expect = 1.526e-50 Identity = 104/293 (35.49%), Postives = 169/293 (57.68%), Query Frame = 0
Query: 128 LDWEYGYAPDLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQYGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWETPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGG-QVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDA 419
++ EY + +++GA++ L IIG G + N +I I +L TP N+++ NL S+ +S G P+ A+I +GW G +C GF + L G++SI TLT L+ R L++ +K TA ++ IW + A+ PPL GW Y ES+ +SC+ WE+ E+ Y Y+ +FG F P+ ++ +S S++ T+++ ++ + +IG+ A K E +V +MV VMI +F+ W PY++++L GG +SP S P L KSSIC NP+IY+ +N+ FR A
Sbjct: 1 MNGEYAQPQHISDSIYLGAAIVLSIIGIVGFLFNTCVIFIMIRDPRLWTPQNVIIFNLATSDLAVSVLGNPVTLAAAITKGWIFGQTICVIYGFFMALFGIASITTLTVLAYDRYLMIRYPFSSTRLTKETAIYAIVGIWIYAFAVTGPPLFGWNRYVNESANISCSIDWESGEHSNYVIYIFVFGLFLPVTVIIYSYVSLVVTVRKRSA--EKVIGQ--ATKAECRVAIMVAVMILAFLTAWMPYSVLALMIAFGGVHISPVVSIIPALCAKSSICWNPIIYIGLNTQFRSA 289
BLAST of c-opsin vs. nr
Match: gi|939677391|ref|XP_014284462.1| (PREDICTED: pinopsin-like [Halyomorpha halys]) HSP 1 Score: 186.808 bits (473), Expect = 6.208e-50 Identity = 106/308 (34.42%), Postives = 182/308 (59.09%), Query Frame = 0
Query: 160 GNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQ---YGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWETPENQ--TYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLY-QMCGGQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFRRKDLNSVHSTLRSFQRVKPSKRVKIRPKLDELKSK 461
N ++I+ +QL TP N +L+NLI+S+F +S G P F +++ + W G +C GF + ++G++SI TL+ LS++R L++S+ +GQ+ +++TA ++++ +W S + PPL+GW Y PE++ +SC+ +WET + +Y YL IFGFF P+I++ +S +++ T++++ S GR + K E++V MV +MI +F W+PYA+ +L ++SP + P +F K+SIC NP+IYV +NS FR + R+D + V + L + P RP+ E K K
Sbjct: 27 ANLTVIVVMCRDQQLWTPLNYILLNLIMSDFSVSLLGNPFTFVSAVAKTWIFGKTMCIIYGFFMAILGITSIGTLSVLSLERYLIISRPVSHGQL---TRKTAILLVMAVWLYSFTLTFPPLIGWGEYGPEAANLSCSVNWETRSHSSTSYIMYLFIFGFFLPIIIICYSYMNIIFTIKKSRSTA----GRVA--KAESRVTWMVAIMILAFFISWTPYAISALLIAFLDARISPGLATVPAVFAKTSICYNPIIYVGLNSQFRQSWKRLLGFREDCSEVTTGLTG--GISPR-----RPQFTEYKGK 318
BLAST of c-opsin vs. nr
Match: gi|1229903444|ref|XP_022172540.1| (rhodopsin-like [Myzus persicae]) HSP 1 Score: 188.734 bits (478), Expect = 6.225e-50 Identity = 104/293 (35.49%), Postives = 167/293 (57.00%), Query Frame = 0
Query: 128 LDWEYGYAPDLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQYGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWETPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCGG-QVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDA 419
++ EY + +++GA++ L IIG G + N +I I +L TP N+++ NL S+ +S G P+ A+I +GW G +C GF + L G++SI TLT L+ R L++ +K TA + IW + A+ PPL GW Y ES+ +SC+ WE+ E+ Y Y+ +FG F P+ ++ +S S++ T+++ + + +IG+ A K E +V +MV VMI +F+ W PY++++L GG +SP S P L KSSIC NP+IY+ +N+ FR A
Sbjct: 1 MNGEYAQPQHISDSIYLGAAIVLSIIGIVGFLFNTCVIFIMIRDPRLWTPQNVIIFNLATSDLAVSVLGNPVTLAAAITKGWIFGQTICVIYGFFMALFGIASITTLTVLAYDRYLMIRYPFSSTRLTKETAIYAIAGIWIYAFAVTGPPLFGWNRYVNESANISCSIDWESGEHSNYVIYIFVFGLFLPVTVIIYSYVSLVVTVRKRAA--EKIIGQ--ATKAECRVAIMVAVMILAFLTAWMPYSVLALMIAFGGVHISPVVSIIPALCAKSSICWNPIIYIGLNTQFRSA 289
BLAST of c-opsin vs. nr
Match: gi|1229705748|ref|XP_022114596.1| (parapinopsin-like [Pieris rapae]) HSP 1 Score: 190.274 bits (482), Expect = 1.139e-49 Identity = 114/316 (36.08%), Postives = 178/316 (56.33%), Query Frame = 0
Query: 130 WEY--GYAPDLPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKKQLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQRCLLVSQYGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWETPENQTYNFYLIIF--GFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQM--CGGQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFRRKDLNSVHSTLRS 439
W Y G+ +P W ++ ++ LF+IG FG N +IL +QL TP N++L NL+ S+F +S G P+ +++ W G +C GF + L+G++SI TLT +S +R L+V++ + S ++AA+ +I IW SLA+ PPLMGW Y E++ +SC+ +W T + L +F G PL ++ FS +++RTM+RN+ +L GR + E + MV +MI SF W+PY+L +L + G +SP P L KSSIC +P+IYV MN+ FR ++ K + VHS +S
Sbjct: 12 WAYDEGFPLLMPRWGYVASAFVLFLIGFFGFFLNLMVILLMFKDRQLWTPLNIILFNLVCSDFSVSVLGNPLTLISALFHRWVFGKTMCVLYGFFMALLGITSITTLTVISFERYLMVTRPLRSRHLSSKSAAVSVIFIWMYSLALTTPPLMGWGNYVNEAANISCSVNWHEQSRNTLTYILFLFAMGQIVPLTVITFSYVNIIRTMKRNSQRL----GRVRVSRAEARATAMVFIMIISFTVAWTPYSLFALMEQFASEGIISPGAGVIPALVAKSSICYDPLIYVGMNTQFRQSI-------KKIFGVHSKCQS 316
BLAST of c-opsin vs. nr
Match: gi|1121117877|ref|XP_019548118.1| (PREDICTED: vertebrate ancient opsin-like [Aedes albopictus]) HSP 1 Score: 188.734 bits (478), Expect = 1.600e-49 Identity = 131/387 (33.85%), Postives = 206/387 (53.23%), Query Frame = 0
Query: 138 LPPWLFIGASVYLFIIGTFGIIGNGSIILAFICKK-QLQTPFNLVLMNLIVSEFIISAYGVPIDFTASILRGWKMGAPLCSATGFILTLVGMSSIYTLTGLSVQR-CLLVSQYGQIDLHSKRTAAMILITIWTLSLAMALPPLMGWAFYAPESSGMSCAPSWE--TPENQTYNFYLIIFGFFAPLILLFFSSGSVLRTMQRNTSQLQTMIGRKSAHKRENKVNLMVLVMIGSFIFCWSPYALMSLYQMCG--GQVSPYTSAFPMLFCKSSICTNPVIYVAMNSTFRDALIPSGFRRKDLNSVHSTLRSFQR---VKPSKRVKIRPKLDELKSKRL------STISGCIETSVQTEVHAKPKQNQANDFGYPPMEQGPLIAPQDIGSE 509
+ PW +I ++V LF IG FG N +I A +CK QL TP N++L NL+ S+F +S G P T++I R W G +C A GF ++L+G++SI TLT LS +R CL+ + L S+R A ++ IW+ S A+ PPL GW Y E++ +SC+ +WE T +Y +L +FG PL+++ +S +++ M+RN ++ +GR ++ E +V MV VM+ +F+ W+PYA+ +L + G +SP P L KSSIC NP+IYV MN+ FR A R ++ S+ + + Q+ + SK + + D + KRL S + + + + A P D P Q L + + SE
Sbjct: 1 MEPWAYIASAVTLFFIGFFGFFLNLFVI-ALMCKDVQLWTPMNIILFNLVCSDFSVSIIGNPFTLTSAISRHWIFGRTVCIAYGFFMSLLGITSITTLTVLSYERFCLISYPFSSRSL-SRRGAIFSILFIWSYSFALTSPPLFGWGAYVNEAANISCSVNWESQTVNATSYIIFLFVFGLVVPLVVIVYSYTNIVVNMKRNAAR----VGR--INRAEKRVTRMVFVMVLAFMIAWTPYAVFALIEQFGPTDIISPALGVLPALIAKSSICYNPIIYVGMNTQFRAAF----NRVRNNESLDNNTTTNQKDITMNTSKDI-VECSFDFCRKKRLKIKLQSSIKNKNNNNNSRQQSLADPSSTTNGDLDQPSPAQTVLNSTTVVNSE 374 The following BLAST results are available for this feature:
BLAST of c-opsin vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 24
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BLAST of c-opsin vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of c-opsin vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold303_size215788:48673..126307- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold303_size215788-snap-gene-1.12 ID=maker-scaffold303_size215788-snap-gene-1.12|Name=c-opsin|organism=Tigriopus kingsejongensis|type=gene|length=77635bp|location=Sequence derived from alignment at scaffold303_size215788:48673..126307- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'c-opsin' has the following synonyms
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