transcription factor gata-5, maker-scaffold346_size200932-snap-gene-1.16 (gene) Tigriopus kingsejongensis

Overview
Nametranscription factor gata-5
Unique Namemaker-scaffold346_size200932-snap-gene-1.16
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000003992 (supercontig:LSalAtl2s:LSalAtl2s213:422855:424673:-1 gene:EMLSAG00000003992 transcript:EMLSAT00000003992 description:"maker-LSalAtl2s213-snap-gene-4.20")

HSP 1 Score: 86.2705 bits (212), Expect = 1.196e-19
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0 
Query:   65 CCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVKPKKCKKSLNSSPKRAPLKANI 145
            CC NC T TT+LWRRN+ G PVCNACGLY+KLH + RP+ MRKD +  R RK  + +  K       +N     + LK ++
Sbjct:  239 CCTNCGTSTTTLWRRNNDGEPVCNACGLYYKLHSVNRPLAMRKDGIQTRKRKQKSSALTKKSFKASEVNKKSSSSMLKMDL 319
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000005033 (supercontig:LSalAtl2s:LSalAtl2s261:433616:435787:-1 gene:EMLSAG00000005033 transcript:EMLSAT00000005033 description:"maker-LSalAtl2s261-augustus-gene-3.16")

HSP 1 Score: 83.5741 bits (205), Expect = 1.293e-18
Identity = 63/189 (33.33%), Postives = 89/189 (47.09%), Query Frame = 0 
Query:   62 KDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVKPKKCKKSLNSSPKRAPLKANIPGFDANFVKLSLEGSCIESKLFDSHDNAYTKDSSQHDSSYPNGSLMF-----NEETEDDIQSSNASVTISAL-MESGFQPSQINFSHLQMPKSHKGFHKRRQQCN 244
            K++ C NC T+TTSLWRR+  GS +CNACGLY+KLHG+ RP+  RKD +  R RK     N  PK  KK  N    RA  KA                               TKD +Q  S   + + +F       +   +   S   V ++ L +  GF P+ IN S+L +P  ++ + +RR + N
Sbjct:  366 KNSECVNCFTKTTSLWRRDGSGSSICNACGLYFKLHGVDRPLQYRKDHIQTRKRK----PNSAPKSKKKCAN----RA--KA-----------------------------VTTKDPNQRKSHEASSTSIFRSPPPPPQNRQNYSQSPPQVVMTPLGLGLGFDPATINLSNLTLP--NRNYTRRRLRIN 513
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000000271 (supercontig:LSalAtl2s:LSalAtl2s1041:63939:77263:1 gene:EMLSAG00000000271 transcript:EMLSAT00000000271 description:"maker-LSalAtl2s1041-snap-gene-0.35")

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-17
Identity = 42/80 (52.50%), Postives = 50/80 (62.50%), Query Frame = 0 
Query:   65 CCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVC-NRNRKDLAHSNVK-PKKCKKSLNSSPKRAPLK 142
             CANC T  T+LWRRN+ G PVCNACGLY+KLH   RP+ M+KD V   R RK  +  N + P K KKS   SP    L+
Sbjct:  393 VCANCATTKTTLWRRNNNGEPVCNACGLYYKLHRTPRPLAMKKDGVIQTRKRKPKSIVNHEHPVKVKKSQMPSPNTLELQ 472
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000008797 (supercontig:LSalAtl2s:LSalAtl2s547:87074:89043:1 gene:EMLSAG00000008797 transcript:EMLSAT00000008797 description:"maker-LSalAtl2s547-augustus-gene-0.8")

HSP 1 Score: 77.7962 bits (190), Expect = 5.696e-17
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 0 
Query:   43 GVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            G+ +P+V    +       + T C+NC T  T+LWRRN  G PVCNACGLY KLH I RP+ ++KD +  RNRK
Sbjct:  206 GMNRPLVKPKRKITTTPKREGTVCSNCKTTNTTLWRRNHIGEPVCNACGLYHKLHKIARPITLKKDGIQTRNRK 279

HSP 2 Score: 56.225 bits (134), Expect = 1.775e-9
Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKD 117
            C NC   +T LWRR   G  +CNACGLY+K++G+ RP+   K K+    +++
Sbjct:  174 CVNCGATSTPLWRRXGNGHYLCNACGLYYKMNGMNRPLVKPKRKITTTPKRE 225
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000000540 (supercontig:LSalAtl2s:LSalAtl2s1088:53016:73480:1 gene:EMLSAG00000000540 transcript:EMLSAT00000000540 description:"maker-LSalAtl2s1088-augustus-gene-0.12")

HSP 1 Score: 70.4774 bits (171), Expect = 2.793e-14
Identity = 32/74 (43.24%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:   43 GVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            G  +P+V            + T C+NC T  T+LWRR   G  VCNACGLY KLH   RP+ ++K+ +  RNRK
Sbjct:  228 GSNRPLVKPKNSRVSTSKREGTVCSNCKTNQTTLWRRTPSGETVCNACGLYQKLHNTPRPITLKKECIQTRNRK 301

HSP 2 Score: 54.6842 bits (130), Expect = 5.424e-9
Identity = 26/60 (43.33%), Postives = 35/60 (58.33%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRP-VHMRKDKVCNRNRKDLAHSNVK 124
            C NC   +T LWRR+  G  +CNACGLY+K++G  RP V  +  +V    R+    SN K
Sbjct:  196 CVNCGATSTPLWRRDGNGHYLCNACGLYYKMNGSNRPLVKPKNSRVSTSKREGTVCSNCK 255
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000000541 (supercontig:LSalAtl2s:LSalAtl2s1088:79520:96507:-1 gene:EMLSAG00000000541 transcript:EMLSAT00000000541 description:"maker-LSalAtl2s1088-augustus-gene-1.12")

HSP 1 Score: 70.0922 bits (170), Expect = 5.354e-14
Identity = 34/63 (53.97%), Postives = 39/63 (61.90%), Query Frame = 0 
Query:   62 KDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVK 124
            + T CANC T TT+LWRRN  G PVCNACGLY+KLH         KD +  RNRK    + VK
Sbjct:  392 EGTICANCKTTTTTLWRRNPNGEPVCNACGLYYKLH--------NKDGIQTRNRKLSTKTKVK 446

HSP 2 Score: 55.8398 bits (133), Expect = 2.633e-9
Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVK 124
            C NC    T LWRR+  G  +CNACGLY+K++G  RP+   K ++ +  R+    +N K
Sbjct:  342 CVNCGATATPLWRRDRNGHYLCNACGLYYKMNGQNRPLIKPKKRLSSTKREGTICANCK 400
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000008794 (supercontig:LSalAtl2s:LSalAtl2s547:174889:177327:-1 gene:EMLSAG00000008794 transcript:EMLSAT00000008794 description:"maker-LSalAtl2s547-snap-gene-1.11")

HSP 1 Score: 63.1586 bits (152), Expect = 1.936e-12
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 0 
Query:   40 IKSGVKKPVVSLWGENRGARLSKD-TCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRK 107
            + +GV +P++    + R   L +  T C+NC T TT+LWRRN  G+PVCNACGLY+KLH  +     RK
Sbjct:   65 MNNGVNRPLIK--PKRRIIPLKRTGTSCSNCKTTTTTLWRRNHDGNPVCNACGLYYKLHSAEIQTRNRK 131
[Close]
BLAST of transcription factor gata-5 vs. L. salmonis genes
Match: EMLSAG00000000537 (supercontig:LSalAtl2s:LSalAtl2s1088:114721:116639:1 gene:EMLSAG00000000537 transcript:EMLSAT00000000537 description:"maker-LSalAtl2s1088-snap-gene-1.14")

HSP 1 Score: 58.5362 bits (140), Expect = 1.085e-10
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHG 98
            C+NCNT TT+LWRRN  G PVCNACGLY+KLHG
Sbjct:  116 CSNCNTTTTTLWRRNGTGEPVCNACGLYYKLHG 148

HSP 2 Score: 54.6842 bits (130), Expect = 1.889e-9
Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNV 123
            C NC   TT LWRR+  G  +CNACGLY+K++G  RP+   K K+  + R     SN 
Sbjct:   62 CVNCXATTTPLWRRDGNGHYLCNACGLYYKMNGTNRPLVKPKRKMNTQKRVGXQCSNC 119
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|1709699|sp|P52168.1|PNR_DROME (RecName: Full=GATA-binding factor A; AltName: Full=Protein pannier; AltName: Full=Transcription factor GATA-A; AltName: Full=dGATA-A)

HSP 1 Score: 89.3521 bits (220), Expect = 4.182e-19
Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 0 
Query:   65 CCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            CC NC T+TT+LWRRN+ G PVCNACGLY+KLHG+ RP+ MRKD +  R RK
Sbjct:  225 CCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRK 276

HSP 2 Score: 53.1434 bits (126), Expect = 7.112e-7
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPV 103
            C NC   +T LWRR+  G  +CNACGLY K++G+ RP+
Sbjct:  169 CVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPL 206
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|341940731|sp|P97489.2|GATA5_MOUSE (RecName: Full=Transcription factor GATA-5; AltName: Full=GATA-binding factor 5)

HSP 1 Score: 88.5817 bits (218), Expect = 4.412e-19
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 0 
Query:   43 GVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVK 124
            GV +P+V        +R S   CC+NC+T TT+LWRRNS+G PVCNACGLY KLHG+ RP+ M+K+ +  R RK    + +K
Sbjct:  228 GVNRPLVRPQKRLSSSRRS-GLCCSNCHTATTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKNPAKIK 308

HSP 2 Score: 57.3806 bits (137), Expect = 2.482e-8
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSN 122
            C NC   +T LWRR+  G  +CNACGLY K++G+ RP+   + ++ +  R  L  SN
Sbjct:  196 CVNCGALSTPLWRRDGTGHYLCNACGLYHKMNGVNRPLVRPQKRLSSSRRSGLCCSN 252
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|3182912|sp|O13412.1|AREA_ASPNG (RecName: Full=Nitrogen regulatory protein areA)

HSP 1 Score: 87.8113 bits (216), Expect = 1.812e-18
Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0 
Query:   39 GIKSGVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNR 115
            G+ S V     S  G   G + S  T C NC TQTT LWRRN +G P+CNACGL+ KLHG+ RP+ ++ D +  RNR
Sbjct:  649 GLSSAVPSRPASPGGSKNGEQSSGPTTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGVVRPLSLKTDVIKKRNR 725
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|1169807|sp|P43696.1|GAT5B_XENLA (RecName: Full=GATA-binding factor 5-B; AltName: Full=Transcription factor xGATA-5B)

HSP 1 Score: 85.8853 bits (211), Expect = 3.106e-18
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 0 
Query:   43 GVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            G+ +P++        +R +   CC NC+T TT+LWRRNS+G PVCNACGLY KLHG+ RP+ M+K+ +  R RK
Sbjct:  216 GINRPLIKPQKRLSSSRRA-GLCCTNCHTSTTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRK 288

HSP 2 Score: 56.6102 bits (135), Expect = 4.288e-8
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSN 122
            C NC   +T LWRR+  G  +CNACGLY K++GI RP+   + ++ +  R  L  +N
Sbjct:  184 CVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQKRLSSSRRAGLCCTN 240
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|1169806|sp|P43695.1|GAT5A_XENLA (RecName: Full=GATA-binding factor 5-A; AltName: Full=Transcription factor xGATA-5A)

HSP 1 Score: 85.8853 bits (211), Expect = 3.338e-18
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0 
Query:   65 CCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            CC NC+T TT+LWRRNS+G PVCNACGLY KLHG+ RP+ M+K+ +  R RK
Sbjct:  236 CCTNCHTSTTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRK 287

HSP 2 Score: 55.0694 bits (131), Expect = 1.146e-7
Identity = 23/57 (40.35%), Postives = 35/57 (61.40%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSN 122
            C NC   +T LWRR+  G  +CNACGLY K++G+ RP+   + ++ +  R  L  +N
Sbjct:  183 CVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPQKRLSSSRRAGLCCTN 239
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|62286680|sp|Q924Y4.1|GATA2_RAT (RecName: Full=Endothelial transcription factor GATA-2; AltName: Full=GATA-binding protein 2)

HSP 1 Score: 86.2705 bits (212), Expect = 3.958e-18
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0 
Query:   64 TCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNR 115
            TCCANC T TT+LWRRN+ G PVCNACGLY+KLH + RP+ M+K+ +  RNR
Sbjct:  347 TCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNR 398
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|120958|sp|P23824.1|GATA2_CHICK (RecName: Full=GATA-binding factor 2; Short=GATA-2; AltName: Full=Transcription factor NF-E1b)

HSP 1 Score: 85.8853 bits (211), Expect = 4.837e-18
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0 
Query:   64 TCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNR 115
            TCCANC T TT+LWRRN+ G PVCNACGLY+KLH + RP+ M+K+ +  RNR
Sbjct:  333 TCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNR 384
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|21264417|sp|O09100.2|GATA2_MOUSE (RecName: Full=Endothelial transcription factor GATA-2; AltName: Full=GATA-binding protein 2)

HSP 1 Score: 85.8853 bits (211), Expect = 5.028e-18
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0 
Query:   64 TCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNR 115
            TCCANC T TT+LWRRN+ G PVCNACGLY+KLH + RP+ M+K+ +  RNR
Sbjct:  347 TCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNR 398
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|229462971|sp|P23769.3|GATA2_HUMAN (RecName: Full=Endothelial transcription factor GATA-2; AltName: Full=GATA-binding protein 2)

HSP 1 Score: 85.8853 bits (211), Expect = 5.532e-18
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0 
Query:   64 TCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNR 115
            TCCANC T TT+LWRRN+ G PVCNACGLY+KLH + RP+ M+K+ +  RNR
Sbjct:  347 TCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNR 398
[Close]
BLAST of transcription factor gata-5 vs. SwissProt
Match: gi|215274105|sp|P43694.2|GATA4_HUMAN (RecName: Full=Transcription factor GATA-4; AltName: Full=GATA-binding factor 4)

HSP 1 Score: 85.5001 bits (210), Expect = 6.123e-18
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            CANC T TT+LWRRN++G PVCNACGLY KLHG+ RP+ MRK+ +  R RK
Sbjct:  271 CANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRK 321

HSP 2 Score: 56.6102 bits (135), Expect = 3.892e-8
Identity = 24/59 (40.68%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVK 124
            C NC   +T LWRR+  G  +CNACGLY K++GI RP+   + ++    R  L+ +N +
Sbjct:  217 CVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRVGLSCANCQ 275
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|1199394354|ref|XP_021192285.1| (GATA-binding factor A-like isoform X3 [Helicoverpa armigera])

HSP 1 Score: 96.2857 bits (238), Expect = 1.286e-19
Identity = 58/145 (40.00%), Postives = 75/145 (51.72%), Query Frame = 0 
Query:    5 PAHESRRPSLYDTSEGDLSRRLKPTTTTGTLGGPGIKSGVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSN-VKPKK--CKKSLNSSPKRAPLKANIP 146
            P    +RP+ Y      L+R  K  T    +   G+  G+KK      G+          CC NC ++ T+LWRRN+ G PVCNACGLY+KLHGI RP+ MRKD +  R RK     N  KP +   KK  +SSP     K +IP
Sbjct:   88 PYDALQRPTAYGADADLLTRFYKEGTVQRWMSVEGMARGMKKSAARRHGQ----------CCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGTKPAQDANKKDEHSSPGMDDSKQSIP 222
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|524949112|ref|XP_005074576.1| (transcription factor GATA-5 [Mesocricetus auratus])

HSP 1 Score: 95.5153 bits (236), Expect = 4.432e-19
Identity = 59/156 (37.82%), Postives = 80/156 (51.28%), Query Frame = 0 
Query:   43 GVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVKPKKCKKSLNSSPKRAPLKANIPGFDANFVKLSLEGSCIESKLFDSHDNAYTKDSSQHDSSYPNGSLMFNEETED 198
            GV +P+V        +R S   CC+NC+T TT+LWRRN++G PVCNACGLY KLHG+ RP+ M+K+ +  R RK        P K K S  S+   A     +P  + +   L  E S + S +F     +    SS  + S     L F  E ED
Sbjct:  229 GVNRPLVRPQKRLSSSRRS-GLCCSNCHTATTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKP-----KNPAKIKGSSGSTANTAACSPALPNTEGSATTLKAEPS-LASPVFPGPTISSQASSSPANESLAPNHLEFKFEPED 377
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|910354850|ref|XP_013181276.1| (PREDICTED: transcription factor GATA-5-like isoform X1 [Papilio xuthus])

HSP 1 Score: 94.7449 bits (234), Expect = 5.493e-19
Identity = 56/140 (40.00%), Postives = 74/140 (52.86%), Query Frame = 0 
Query:   10 RRPSLYDTSEGDLSRRLKPTTTTGTLGGPGIKSGVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK-DLAHSNVKPKK--CKKSLNSSPKRAPLKANIP 146
            +RP  Y      L+R  K  +    +   G+  G+KK      G+          CC NC ++ T+LWRRN+ G PVCNACGLY+KLHGI RP+ MRKD +  R RK   + S  KP +   KK  +SSP     K N+P
Sbjct:   97 QRPPAYGADAELLTRFYKDGSVQRWMSVEGMARGMKKSAARRHGQ----------CCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSASGAKPPQDNVKKDEHSSPGIDESKPNVP 226
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|943966372|ref|XP_014365244.1| (PREDICTED: GATA-binding factor A-like [Papilio machaon])

HSP 1 Score: 93.9745 bits (232), Expect = 1.016e-18
Identity = 56/140 (40.00%), Postives = 74/140 (52.86%), Query Frame = 0 
Query:   10 RRPSLYDTSEGDLSRRLKPTTTTGTLGGPGIKSGVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK-DLAHSNVKPKK--CKKSLNSSPKRAPLKANIP 146
            +RP  Y      L+R  K  +    +   G+  G+KK      G+          CC NC ++ T+LWRRN+ G PVCNACGLY+KLHGI RP+ MRKD +  R RK   + S  KP +   KK  +SSP     K N+P
Sbjct:   97 QRPPAYGADAELLTRFYKDGSVQRWMSVEGMARGMKKSAARRHGQ----------CCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSASGAKPPQDNAKKDDHSSPGIDESKPNVP 226
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|1274118506|ref|XP_022819744.1| (transcription factor GATA-4-like isoform X2 [Spodoptera litura])

HSP 1 Score: 93.5893 bits (231), Expect = 1.482e-18
Identity = 46/107 (42.99%), Postives = 60/107 (56.07%), Query Frame = 0 
Query:   10 RRPSLYDTSEGDLSRRLKPTTTTGTLGGPGIKSGVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            +RP+ Y      L+R  K  T    +   G+  G+KK      G+          CC NC ++ T+LWRRN+ G PVCNACGLY+KLHGI RP+ MRKD +  R RK
Sbjct:   93 QRPTAYGADADLLTRFYKEGTVQRWMSVEGMARGMKKSAARRHGQ----------CCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRK 189
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|157169241|gb|ABV25955.1| (GATA-binding transcription factor B2, partial [Capitella teleta])

HSP 1 Score: 92.0485 bits (227), Expect = 2.092e-18
Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:   40 IKSGVKKPVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRK 116
            + SG  KPV+   G  R         CANC+T TT+LWRRN++G PVCNACGLY+KLHG+ RP+ M+K+ +  R RK
Sbjct:  102 VMSGFAKPVMKTSGGRRSVSRRVGLSCANCHTSTTTLWRRNNEGEPVCNACGLYFKLHGVNRPMSMKKEGIQTRKRK 178
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|1276822401|gb|PIO60070.1| (GATA zinc finger, partial [Teladorsagia circumcincta])

HSP 1 Score: 87.4261 bits (215), Expect = 2.720e-18
Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 0 
Query:   66 CANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNVKPKKCKKSLNSSPKRAPL 141
            C NCNT TT+LWRRN  G PVCNACGLY+KLH ++RP+ M+KD +  RNRK ++    KPK  + +   S K AP+
Sbjct:   10 CVNCNTNTTTLWRRNGGGEPVCNACGLYYKLHQVERPLTMKKDGIQTRNRK-MSTKGKKPKTEEPNTWGSMKTAPM 84
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|645021119|ref|XP_008207460.1| (PREDICTED: putative mediator of RNA polymerase II transcription subunit 12 isoform X3 [Nasonia vitripennis])

HSP 1 Score: 93.9745 bits (232), Expect = 3.714e-18
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:   47 PVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNV 123
            P VS  G   G R      CANC+T TT+LWRRN+ G PVCNACGLY+KLHG+ RP+ M+KD +  R RK   H+NV
Sbjct:  558 PPVSTGGRRLGVR------CANCSTTTTTLWRRNNNGEPVCNACGLYFKLHGVNRPMSMKKDGIQTRKRKPKNHANV 628
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|1032764792|ref|XP_016841133.1| (PREDICTED: putative mediator of RNA polymerase II transcription subunit 12 isoform X1 [Nasonia vitripennis])

HSP 1 Score: 93.9745 bits (232), Expect = 3.758e-18
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:   47 PVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNV 123
            P VS  G   G R      CANC+T TT+LWRRN+ G PVCNACGLY+KLHG+ RP+ M+KD +  R RK   H+NV
Sbjct:  563 PPVSTGGRRLGVR------CANCSTTTTTLWRRNNNGEPVCNACGLYFKLHGVNRPMSMKKDGIQTRKRKPKNHANV 633
[Close]
BLAST of transcription factor gata-5 vs. nr
Match: gi|1032764797|ref|XP_016841135.1| (PREDICTED: putative mediator of RNA polymerase II transcription subunit 12 isoform X4 [Nasonia vitripennis] >gi|1032764799|ref|XP_016841136.1| PREDICTED: putative mediator of RNA polymerase II transcription subunit 12 isoform X4 [Nasonia vitripennis])

HSP 1 Score: 93.9745 bits (232), Expect = 3.954e-18
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:   47 PVVSLWGENRGARLSKDTCCANCNTQTTSLWRRNSQGSPVCNACGLYWKLHGIQRPVHMRKDKVCNRNRKDLAHSNV 123
            P VS  G   G R      CANC+T TT+LWRRN+ G PVCNACGLY+KLHG+ RP+ M+KD +  R RK   H+NV
Sbjct:  549 PPVSTGGRRLGVR------CANCSTTTTTLWRRNNNGEPVCNACGLYFKLHGVNRPMSMKKDGIQTRKRKPKNHANV 619
The following BLAST results are available for this feature:
BLAST of transcription factor gata-5 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 8
Match NameE-valueIdentityDescription
EMLSAG000000039921.196e-1946.91supercontig:LSalAtl2s:LSalAtl2s213:422855:424673:-... [more]
EMLSAG000000050331.293e-1833.33supercontig:LSalAtl2s:LSalAtl2s261:433616:435787:-... [more]
EMLSAG000000002712.709e-1752.50supercontig:LSalAtl2s:LSalAtl2s1041:63939:77263:1 ... [more]
EMLSAG000000087975.696e-1748.65supercontig:LSalAtl2s:LSalAtl2s547:87074:89043:1 g... [more]
EMLSAG000000005402.793e-1443.24supercontig:LSalAtl2s:LSalAtl2s1088:53016:73480:1 ... [more]
EMLSAG000000005415.354e-1453.97supercontig:LSalAtl2s:LSalAtl2s1088:79520:96507:-1... [more]
EMLSAG000000087941.936e-1246.38supercontig:LSalAtl2s:LSalAtl2s547:174889:177327:-... [more]
EMLSAG000000005371.085e-1078.79supercontig:LSalAtl2s:LSalAtl2s1088:114721:116639:... [more]
back to top
BLAST of transcription factor gata-5 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1709699|sp|P52168.1|PNR_DROME4.182e-1967.31RecName: Full=GATA-binding factor A; AltName: Full... [more]
gi|341940731|sp|P97489.2|GATA5_MOUSE4.412e-1950.00RecName: Full=Transcription factor GATA-5; AltName... [more]
gi|3182912|sp|O13412.1|AREA_ASPNG1.812e-1849.35RecName: Full=Nitrogen regulatory protein areA[more]
gi|1169807|sp|P43696.1|GAT5B_XENLA3.106e-1850.00RecName: Full=GATA-binding factor 5-B; AltName: Fu... [more]
gi|1169806|sp|P43695.1|GAT5A_XENLA3.338e-1865.38RecName: Full=GATA-binding factor 5-A; AltName: Fu... [more]
gi|62286680|sp|Q924Y4.1|GATA2_RAT3.958e-1865.38RecName: Full=Endothelial transcription factor GAT... [more]
gi|120958|sp|P23824.1|GATA2_CHICK4.837e-1865.38RecName: Full=GATA-binding factor 2; Short=GATA-2;... [more]
gi|21264417|sp|O09100.2|GATA2_MOUSE5.028e-1865.38RecName: Full=Endothelial transcription factor GAT... [more]
gi|229462971|sp|P23769.3|GATA2_HUMAN5.532e-1865.38RecName: Full=Endothelial transcription factor GAT... [more]
gi|215274105|sp|P43694.2|GATA4_HUMAN6.123e-1866.67RecName: Full=Transcription factor GATA-4; AltName... [more]

Pages

back to top
BLAST of transcription factor gata-5 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1199394354|ref|XP_021192285.1|1.286e-1940.00GATA-binding factor A-like isoform X3 [Helicoverpa... [more]
gi|524949112|ref|XP_005074576.1|4.432e-1937.82transcription factor GATA-5 [Mesocricetus auratus][more]
gi|910354850|ref|XP_013181276.1|5.493e-1940.00PREDICTED: transcription factor GATA-5-like isofor... [more]
gi|943966372|ref|XP_014365244.1|1.016e-1840.00PREDICTED: GATA-binding factor A-like [Papilio mac... [more]
gi|1274118506|ref|XP_022819744.1|1.482e-1842.99transcription factor GATA-4-like isoform X2 [Spodo... [more]
gi|157169241|gb|ABV25955.1|2.092e-1851.95GATA-binding transcription factor B2, partial [Cap... [more]
gi|1276822401|gb|PIO60070.1|2.720e-1853.95GATA zinc finger, partial [Teladorsagia circumcinc... [more]
gi|645021119|ref|XP_008207460.1|3.714e-1855.84PREDICTED: putative mediator of RNA polymerase II ... [more]
gi|1032764792|ref|XP_016841133.1|3.758e-1855.84PREDICTED: putative mediator of RNA polymerase II ... [more]
gi|1032764797|ref|XP_016841135.1|3.954e-1855.84PREDICTED: putative mediator of RNA polymerase II ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold346_size200932supercontigscaffold346_size200932:154144..155133 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold346_size200932-snap-gene-1.16-mRNA-1maker-scaffold346_size200932-snap-gene-1.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold346_size200932:154144..155133+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold346_size200932-snap-gene-1.16 ID=maker-scaffold346_size200932-snap-gene-1.16|Name=transcription factor gata-5|organism=Tigriopus kingsejongensis|type=gene|length=990bp|location=Sequence derived from alignment at scaffold346_size200932:154144..155133+ (Tigriopus kingsejongensis)
ATGGTGGCCCAACCAGCTCACGAGTCTCGAAGACCTTCCCTGTACGATAC
TTCCGAGGGTGACTTGAGTCGGCGGCTCAAACCCACCACCACCACCGGCA
CATTGGGGGGTCCTGGCATCAAATCCGGAGTGAAGAAACCAGTGGTGAGT
CTGTGGGGCGAGGTGGTTTGAGTTCCCTTACAATCAGGGATCTAACGGAT
TGGTTGGATATTTCCAGAACCGTGGAGCGCGCTTGAGCAAAGATACGTGC
TGTGCGAATTGTAATACTCAGACCACCTCTCTGTGGCGACGGAACAGCCA
AGGGTCACCCGTGTGCAACGCCTGCGGGCTTTATTGGAAGCTCCACGGCA
TCCAGCGACCGGTTCATATGCGCAAGGACAAGGTCTGCAATCGCAACCGC
AAGGACCTCGCTCATTCTAATGTGAAGCCCAAGAAGTGCAAAAAAAGTCT
GAATTCCAGCCCCAAGAGGGCGCCACTCAAAGGTAAAGAGAACTGTCCTC
AATCGTCCTCCGTGTTGTCCTTGCTCCTGTGCTGTCCATCGATCCTTCCC
ACGTCCACCATGTGTGCTATTCCACCAGCTTCGCTTGAACACAGCTTCCA
ACTCTTGCAGACCTGTGAATGAAGAATCTCATTCCTATTACTTCCTTCCC
CCGATCAGCCAACATCCCCGGGTTCGACGCAAACTTTGTGAAACTGTCGC
TAGAGGGCAGCTGCATCGAATCCAAATTATTTGATAGCCATGACAATGCC
TATACCAAAGACTCCTCACAACACGACTCTAGTTACCCCAATGGCTCGCT
AATGTTCAATGAAGAGACTGAAGACGACATTCAGTCCAGCAATGCGAGTG
TCACTATCTCGGCTTTGATGGAAAGCGGCTTCCAGCCTTCGCAAATCAAC
TTTTCTCATCTGCAAATGCCAAAAAGTCACAAAGGGTTCCACAAAAGAAG
ACAGCAATGCAACAGTATGAACAACAACCACGCCAACTGA
back to top
Synonyms
The feature 'transcription factor gata-5' has the following synonyms
Synonym
Tk04303
Add to Basket