---NA---, maker-scaffold367_size194084-snap-gene-0.40 (gene) Tigriopus kingsejongensis

Overview
Name---NA---
Unique Namemaker-scaffold367_size194084-snap-gene-0.40
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of ---NA--- vs. L. salmonis genes
Match: EMLSAG00000012807 (supercontig:LSalAtl2s:LSalAtl2s975:98418:100862:-1 gene:EMLSAG00000012807 transcript:EMLSAT00000012807 description:"maker-LSalAtl2s975-augustus-gene-0.20")

HSP 1 Score: 97.8265 bits (242), Expect = 2.397e-24
Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 0
Query:   15 RLVYDPDLDQEIIYFATPLRKQIRVEPGTKVDEFKDDRGIRTAGNGVFVEGEFEADDVFCASWSVVIVTAAAFLFLQFCILVVCVLCIFASRR 107
            RLV+D  L QE+I    PL+KQI V+ G  V  FK  R I     GVFV+G++   DV C +W+VVI  +++ +FLQFCIL+VC+LC++ASRR
Sbjct:  543 RLVFDEILKQEVIIEEEPLKKQIFVDTGIAVASFKHPR-IDVGTPGVFVQGDYSEKDVVCTTWTVVIGVSSSIIFLQFCILLVCLLCVYASRR 634          
BLAST of ---NA--- vs. nr
Match: gi|1325323592|ref|XP_023343635.1| (uncharacterized protein LOC111713076 isoform X1 [Eurytemora affinis])

HSP 1 Score: 90.8929 bits (224), Expect = 6.167e-18
Identity = 66/183 (36.07%), Postives = 98/183 (53.55%), Query Frame = 0
Query:   13 ADRLVYDPDLDQEIIYFATPLRKQIRVEPGTKVDEFKDDR-GIRTAGNGVFVEGEFEADDVFCASWSVVIVTAAAFLFLQFCILVVCVLCIFASRRVSKDEYEEDRFLHRREGGVPSTLSHPSERSAESIYGAYVPHRTFSPSLPGTVNTAHYVRSSNHSPM---------STLKSLRTSYRE 185
            + RLV+DP+L QE++   TPL K+I V+ G KVD F+  R     A  GV+++ E   ++V C +  VV+ TAAA +FLQ CILV C+LCI+ +RR  K + + DR                     +S++      R+ +  LP  ++T ++   +  SPM         STLKSLRTS R+
Sbjct:  604 SSRLVFDPNLGQEVLTVDTPLSKEIIVDSGAKVDSFRTPRFQPEQAPGGVYIKREEGEEEVLCTTLPVVVATAAAVIFLQLCILVTCILCIYTARRGRKTDRQVDR---------------------QSLHSG----RSSTTPLPPPLHTLYHDNLTYRSPMSTSSRENSASTLKSLRTSLRD 761          
BLAST of ---NA--- vs. nr
Match: gi|1325323594|ref|XP_023343636.1| (uncharacterized protein LOC111713076 isoform X2 [Eurytemora affinis])

HSP 1 Score: 90.8929 bits (224), Expect = 6.998e-18
Identity = 66/183 (36.07%), Postives = 98/183 (53.55%), Query Frame = 0
Query:   13 ADRLVYDPDLDQEIIYFATPLRKQIRVEPGTKVDEFKDDR-GIRTAGNGVFVEGEFEADDVFCASWSVVIVTAAAFLFLQFCILVVCVLCIFASRRVSKDEYEEDRFLHRREGGVPSTLSHPSERSAESIYGAYVPHRTFSPSLPGTVNTAHYVRSSNHSPM---------STLKSLRTSYRE 185
            + RLV+DP+L QE++   TPL K+I V+ G KVD F+  R     A  GV+++ E   ++V C +  VV+ TAAA +FLQ CILV C+LCI+ +RR  K + + DR                     +S++      R+ +  LP  ++T ++   +  SPM         STLKSLRTS R+
Sbjct:  572 SSRLVFDPNLGQEVLTVDTPLSKEIIVDSGAKVDSFRTPRFQPEQAPGGVYIKREEGEEEVLCTTLPVVVATAAAVIFLQLCILVTCILCIYTARRGRKTDRQVDR---------------------QSLHSG----RSSTTPLPPPLHTLYHDNLTYRSPMSTSSRENSASTLKSLRTSLRD 729          
The following BLAST results are available for this feature:
BLAST of ---NA--- vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000128072.397e-2450.54supercontig:LSalAtl2s:LSalAtl2s975:98418:100862:-1... [more]
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BLAST of ---NA--- vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of ---NA--- vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 2
Match NameE-valueIdentityDescription
gi|1325323592|ref|XP_023343635.1|6.167e-1836.07uncharacterized protein LOC111713076 isoform X1 [E... [more]
gi|1325323594|ref|XP_023343636.1|6.998e-1836.07uncharacterized protein LOC111713076 isoform X2 [E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold367_size194084supercontigscaffold367_size194084:123438..124942 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold367_size194084-snap-gene-0.40-mRNA-1maker-scaffold367_size194084-snap-gene-0.40-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold367_size194084:123438..124942+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold367_size194084-snap-gene-0.40 ID=maker-scaffold367_size194084-snap-gene-0.40|Name=---NA---|organism=Tigriopus kingsejongensis|type=gene|length=1505bp|location=Sequence derived from alignment at scaffold367_size194084:123438..124942+ (Tigriopus kingsejongensis)
ATGGAGGCGGGCTCCAACCAAACATCGCCGGAAATGGCCGACCGATTGGT CTACGATCCGGACCTGGACCAGGAGATCATCTACTTTGCCACTCCTCTGC GCAAGCAAATTCGAGTTGAACCCGGGACCAAGGTGGACGAGTTCAAGGAC GACCGAGGCATCCGAACGGCTGGGAATGGAGGTAAGGCCAGAGGTTGTTT TGAGCAAGGGGATATGCAAGAATCTTAATATGCCCCCTTTGATCACTCTG AACAGTCATCAAGGTTCATGAGATTTAAGGTAAAGCTATGTTGGTGCCAC TCGGAAAGGTTGGATCAAAGTTTCCTATGGTTTGACTGTCAAGATGTCCA ATACACGTCTTGCGTGAGTTCATATTCCCACTGCGAAGCGTCAGTGTGGG ATCCCGCACTCAAAGTATAAAACATTAGGCTTGTGCATGCTCCATGGACT CCATACTATATGCTCCAATACTATATCTGTCGCAATGCAATTAAGCCCTT GGCGGCTGATTAACAAGCGAATGTACAATTCGACAAATTCACGTGGCAAA GGATAATTTTCTTCGCCGCTCATTTTCGCTTGGATTTCCTCCATCCTAAA TGTTGAAAATGAATATAAAAATCCGATTGGCCGAAATGACGTACGAGAAA ACGGATGTTCCCATGTATAGGTATATGCAAAAGCAAACATAATTTGTTCG ATGTATGTGTGGAGTGCTCTAAATGTTCAGATATGCATGGCAAATCAATA GGAACTCACCACAAATCCTTGCTTCCAGTGTTCGTGGAGGGCGAGTTCGA GGCGGATGACGTCTTCTGCGCCAGTTGGTCCGTGGTGATTGTGACTGCGG CCGCCTTTCTGTTCCTCCAATTCTGCATTTTGGTCGTGTGTGTGCTCTGC ATCTTTGCCAGTCGACGTGTGAGCAAGGACGAGTACGAGGAGGATCGCTT CCTCCACCGTCGCGAGGGAGGCGTGCCCTCGACCCTGTCCCACCCCAGCG AGCGGTCGGCCGAGAGCATCTACGGGGCTTACGTCCCGCATCGGACCTTC AGTCCCAGTCTCCCGGGCACGGTGAACACGGCCCACTACGTGAGAAGCTC CAATCACTCGCCCATGAGCACGCTCAAGTCCCTGCGCACCTCGTACCGAG AGTGAACGAGTCTCGACCGCCAATCAAATTGTGTGCTTGTGTACAGTATC GTCGTCAAATATCCCTGGGGCATTCCTTCAACTTCCCAAGTTACCAGTCC GTAGATATGTAGGCATTATGCAGTGCTTGTTCATATATCAATCCAATGGT CATCGAGTTCATCCTTAATCCGGAATGCCATCATATGTCCTTGGGCGAAA GGACACACAAAAAGAGCCTTCTCGCCAGAGGACAAGCCATAAGTGTTCCT TTTTCATTCCTCTTCTTCATTTCTGTGTGCGCATGTTAGATGGAAACACT TTAAAAACGAACCCGTGTCACCCCCATAAAAAGATGCCTAGCTTCCGGCT CTGCG
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Synonyms
The feature '---NA---' has the following synonyms
Synonym
Tk00500
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