intraflagellar transport protein 25 homolog, maker-scaffold405_size181423-snap-gene-0.33 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of intraflagellar transport protein 25 homolog vs. L. salmonis genes
Match: EMLSAG00000000065 (supercontig:LSalAtl2s:LSalAtl2s100:464017:469858:-1 gene:EMLSAG00000000065 transcript:EMLSAT00000000065 description:"maker-LSalAtl2s100-snap-gene-4.25") HSP 1 Score: 50.447 bits (119), Expect = 1.653e-7 Identity = 27/108 (25.00%), Postives = 50/108 (46.30%), Query Frame = 0 Query: 23 RTGTKPWISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRG 130 ++ KPWISTG++PQ IV+ F + +K Y VKE E S +F ++ + I + + + + + ++ I G+D+ +Y +S+ G Sbjct: 31 KSTNKPWISTGLFPQFIVIQFPDTMTVQSCEIKCYKVKECEFLRSQG--KGQFLSIERKVIDMDPIRTDSPLYLDFKDFEEFDTDSVKFLIHSGYDAVVGVYSISVMG 136
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|919060983|ref|XP_013412156.1| (intraflagellar transport protein 25 homolog isoform X3 [Lingula anatina]) HSP 1 Score: 77.7962 bits (190), Expect = 3.593e-14 Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVI-CNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRGSDADHS 136 W++TG+YPQ V+TF L I+ V ++S+NV+++ V S +++ TEF + + + + G QE+ I C GN + AQHL+ I G+D F I+Q+ + G +A HS Sbjct: 12 WVTTGLYPQEFVITFQALMNINTVRIQSFNVRKITVGRSVSNEPTEFELLREKDVESTDGQLQEEEIHCGGN----LTAQHLKFTIQSGYDHFATIHQVHVDG-NAVHS 115
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|919060977|ref|XP_013412153.1| (intraflagellar transport protein 25 homolog isoform X1 [Lingula anatina] >gi|919060981|ref|XP_013412154.1| intraflagellar transport protein 25 homolog isoform X2 [Lingula anatina]) HSP 1 Score: 78.5666 bits (192), Expect = 4.772e-14 Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVI-CNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRGSDADHS 136 W++TG+YPQ V+TF L I+ V ++S+NV+++ V S +++ TEF + + + + G QE+ I C GN + AQHL+ I G+D F I+Q+ + G +A HS Sbjct: 37 WVTTGLYPQEFVITFQALMNINTVRIQSFNVRKITVGRSVSNEPTEFELLREKDVESTDGQLQEEEIHCGGN----LTAQHLKFTIQSGYDHFATIHQVHVDG-NAVHS 140
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|926616282|ref|XP_013773252.1| (intraflagellar transport protein 25 homolog [Limulus polyphemus]) HSP 1 Score: 75.485 bits (184), Expect = 5.627e-13 Identity = 35/103 (33.98%), Postives = 61/103 (59.22%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRGS 131 W +TG+YPQ V+ F ++D V++ YNVKE+ + S++++ EF V + + S GA Q+ I + + A++LR I G+D FCA+Y++ + G+ Sbjct: 45 WTTTGMYPQCFVVAFPSTSSVDSVIISCYNVKEIRLEKSTSNEPVEFEKVGQKELTASSGALQKDTIHSES----FEAKYLRFVITSGYDHFCAVYKIQVSGT 143
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|573877880|ref|XP_006627179.1| (PREDICTED: intraflagellar transport protein 25 homolog [Lepisosteus oculatus]) HSP 1 Score: 71.633 bits (174), Expect = 1.455e-11 Identity = 35/103 (33.98%), Postives = 58/103 (56.31%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRGS 131 WISTG++PQ ++ FSG + I +V ++SYNVK +++ S+ AT+F + I F + Q+ N + A HLR I G D F +++++ + GS Sbjct: 37 WISTGMFPQEFIIRFSGTQKIRLVTIQSYNVKNLKIQKSTFSDATDFEGI----IDKEFEHTEGQLQSNDFALNGTRATHLRFIITSGFDHFVSVHRVMVEGS 135
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|676424580|ref|XP_009044253.1| (hypothetical protein LOTGIDRAFT_208671 [Lottia gigantea] >gi|556117056|gb|ESP05708.1| hypothetical protein LOTGIDRAFT_208671 [Lottia gigantea]) HSP 1 Score: 68.1662 bits (165), Expect = 2.475e-10 Identity = 33/103 (32.04%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRGS 131 W + G+YPQ V+ F+ L I+ V + YN++++++ +S+D + F+ + + S APQ + GN + AQ+LR+ I G+D FCA+Y++++ G+ Sbjct: 37 WATCGLYPQEFVIRFTSLVNINSVSITCYNIRDIKLEVNSDD-SQNFKTIEQKEFQSSDSAPQIEDFSFGN----VKAQNLRVVIESGYDHFCAVYKITVNGT 134
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|1129964090|ref|XP_019741336.1| (PREDICTED: intraflagellar transport protein 25 homolog [Hippocampus comes]) HSP 1 Score: 68.1662 bits (165), Expect = 2.549e-10 Identity = 33/98 (33.67%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQL 126 W+STG++PQ ++ F+ + + V L SYNVK ++V ++++ A+ F V + + L+ G Q I +G NA HLR I G+D F A++++ Sbjct: 37 WMSTGMFPQEFIIRFAEMTNVSSVTLDSYNVKHLKVEKNTSENASHFEFVEEKELKLTEGQLQTNSI----SLGGSNATHLRFIITSGYDHFVAVHKI 130
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|1025307161|ref|XP_016382975.1| (PREDICTED: intraflagellar transport protein 25 homolog [Sinocyclocheilus rhinocerous]) HSP 1 Score: 65.4698 bits (158), Expect = 1.639e-9 Identity = 32/102 (31.37%), Postives = 55/102 (53.92%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRG 130 WISTG++PQ ++ F I V + SYN+K + + ++D A +F AV+ F + + N + V N HLR IL G+D F +++++S++ Sbjct: 37 WISTGMFPQEFIIRFPDNMNIFTVSIHSYNIKRLRIEKGTSDDADKFEAVA----DTEFEHTESSLQANDVSVNVSNTTHLRFLILSGYDHFVSVHKISVQS 134
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|957836175|ref|XP_014668252.1| (PREDICTED: intraflagellar transport protein 25 homolog [Priapulus caudatus]) HSP 1 Score: 65.855 bits (159), Expect = 1.841e-9 Identity = 36/104 (34.62%), Postives = 61/104 (58.65%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEI-GVINAQHLRLNILGGHDSFCAIYQLSIRGS 131 W +TG++PQ VL+FS AI + + +YN+K + V S+ +A F+ ++ + + + G+ Q Q+I E+ AQHLR I +D F A+Y++S+ GS Sbjct: 37 WATTGLFPQEFVLSFSSPVAISNIHIYTYNLKNIMVMRSTEHEAGAFKMLTKKELERTSGSLQSQLI----EVPKATVAQHLRFIIESAYDHFVAVYRVSVDGS 136
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|1024938898|ref|XP_016333258.1| (PREDICTED: intraflagellar transport protein 25 homolog [Sinocyclocheilus anshuiensis]) HSP 1 Score: 65.855 bits (159), Expect = 2.931e-9 Identity = 32/102 (31.37%), Postives = 56/102 (54.90%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRG 130 WISTG++PQ ++ F I V + SYN+K + + ++D A +F AV+ F + + N + V+N HLR IL G+D F +++++S++ Sbjct: 76 WISTGMFPQEFIIRFPDNMKIFTVSIHSYNIKRLRIEKGTSDDAEKFEAVA----DTEFEHTESSLQANDISVNVLNTTHLRFLILSGYDHFVSVHKVSVQS 173
BLAST of intraflagellar transport protein 25 homolog vs. nr
Match: gi|1025151669|ref|XP_016416661.1| (PREDICTED: intraflagellar transport protein 25 homolog [Sinocyclocheilus rhinocerous]) HSP 1 Score: 65.855 bits (159), Expect = 2.989e-9 Identity = 32/102 (31.37%), Postives = 56/102 (54.90%), Query Frame = 0 Query: 29 WISTGIYPQSIVLTFSGLKAIDMVVLKSYNVKEMEVASSSNDQATEFRAVSIQTIPLSFGAPQEQVICNGNEIGVINAQHLRLNILGGHDSFCAIYQLSIRG 130 WISTG++PQ ++ F I V + SYN+K + + ++D A +F AV+ F + + N + V+N HLR IL G+D F +++++S++ Sbjct: 76 WISTGMFPQEFIIRFPDNMKIFTVSIHSYNIKRLRIEKGTSDDAEKFEAVA----DTEFEHTESSLQANDISVNVLNTTHLRFLILSGYDHFVSVHKVSVQS 173 The following BLAST results are available for this feature:
BLAST of intraflagellar transport protein 25 homolog vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of intraflagellar transport protein 25 homolog vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of intraflagellar transport protein 25 homolog vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold405_size181423:5368..7677+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold405_size181423-snap-gene-0.33 ID=maker-scaffold405_size181423-snap-gene-0.33|Name=intraflagellar transport protein 25 homolog|organism=Tigriopus kingsejongensis|type=gene|length=2310bp|location=Sequence derived from alignment at scaffold405_size181423:5368..7677+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'intraflagellar transport protein 25 homolog' has the following synonyms
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