rna helicase, maker-scaffold554_size137761-snap-gene-0.2 (gene) Tigriopus kingsejongensis

Overview
Namerna helicase
Unique Namemaker-scaffold554_size137761-snap-gene-0.2
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000010143 (supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1 gene:EMLSAG00000010143 transcript:EMLSAT00000010143 description:"augustus_masked-LSalAtl2s66-processed-gene-7.1")

HSP 1 Score: 214.927 bits (546), Expect = 6.826e-62
Identity = 140/406 (34.48%), Postives = 207/406 (50.99%), Query Frame = 0 
Query:   23 MARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDA---PLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQS---ANASTLVQRVF--EVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHED 420
            M  + +  ++ P+PIQ Q  P +L G DLI  A TG+GKT AF LP    IH D+   P ++R G     + L+L PTRELA Q+AD VK Y   + G IK+VCV+GG     Q++ +  G  I++ATP                     N  I++ C                                    I ++ +  LVLDEADRML +GF  ++  IL  +   +QT++ SAT+P  V+ L    + DPI V + S   A   ++ Q++F  E E+ +   LL          +A+IF++ K   +  +  L   G+  +  HG + Q  R + L DFK G + +LIATD+A+RG+D+E +  VINFD P S  +Y+HRIGRSGRAG+ G ++S + + D
Sbjct:    1 MTAIQKRGFKNPSPIQCQAWPYLLKGLDLIGIAQTGTGKTLAFLLPSF--IHIDSQSIPREKRGGP----NVLVLSPTRELALQIADEVKKY--EYRG-IKSVCVYGGGDRKAQVKVVTQGVQIVIATP------------------GRLNDLIESGC------------------------------------IAVESITYLVLDEADRMLDMGFEPQIRKILLDVRPDRQTVMTSATWPPGVRRLASNYMKDPITVSIGSLDLAAVHSVTQKIFVVESEEEKDDRLLDFFNNMTPEDKAIIFMSKKAKVDDYSSSLCLAGVDCQSIHGGRDQMDREQALLDFKLGHVRILIATDVASRGIDVEDISHVINFDFPNSMEEYVHRIGRSGRAGKKGSSISFMTYRD 343

HSP 2 Score: 172.17 bits (435), Expect = 1.420e-46
Identity = 93/232 (40.09%), Postives = 139/232 (59.91%), Query Frame = 0 
Query:  441 GTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQS---ANASTLVQRVF--EVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHED 667
            G  I++ATPGRL DLI S  I ++ +  LVLDEADRML +GF  ++  IL  +   +QT++ SAT+P  V+ L    + DPI V + S   A   ++ Q++F  E E+ +   LL          +A+IF++ K   +  +  L   G+  +  HG + Q  R + L DFK G + +LIATD+A+RG+D+E +  VINFD P S  +Y+HRIGRSGRAG+ G ++S + + D
Sbjct:  112 GVQIVIATPGRLNDLIESGCIAVESITYLVLDEADRMLDMGFEPQIRKILLDVRPDRQTVMTSATWPPGVRRLASNYMKDPITVSIGSLDLAAVHSVTQKIFVVESEEEKDDRLLDFFNNMTPEDKAIIFMSKKAKVDDYSSSLCLAGVDCQSIHGGRDQMDREQALLDFKLGHVRILIATDVASRGIDVEDISHVINFDFPNSMEEYVHRIGRSGRAGKKGSSISFMTYRD 343
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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000004918 (supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989:-1 gene:EMLSAG00000004918 transcript:EMLSAT00000004918 description:"maker-LSalAtl2s259-augustus-gene-10.16")

HSP 1 Score: 213.001 bits (541), Expect = 4.481e-61
Identity = 145/394 (36.80%), Postives = 206/394 (52.28%), Query Frame = 0 
Query:   31 YQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKG--NFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCV-FGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSAN--ASTLVQRVFEV--EKGRKTALLAHLIQQHQWR-QALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLI 416
            ++ PTPIQ+   P V +GRD+I  A TGSGKT AF++P L  I E     +R  KG  +    LI+ PTRELA Q    ++S         K++CV+GGV+   Q Q+L+ G +ILVATP    +LA++                   CV   GVS                                      +VLDEADRML  GF +++  IL     ++QT LFSAT+P+ ++ L HE L  PI+V + S +  A   V ++ EV  E+ R   +   L + H+ + + LIFV  K   + L + L K        HGDK Q +R + +E+FKSG+I +LIATD+AARGLDI  +  V+N+  P +  DY+HRIGR+GRAG+ G+A +  
Sbjct:  128 FKAPTPIQSMTWPVVASGRDVIGIAETGSGKTLAFSVPALAHISERK---QRPVKGVNSMPIMLIVAPTRELAMQSQVVLESAGKEI--GFKSLCVYGGVNKYAQRQSLKSGVEILVATPGRLLDLAEE------------------GCVDLSGVSY-------------------------------------VVLDEADRMLDQGFEQDIRRILGQTHKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKTVTQIVEVVDERSRDGKIKGLLNKYHKKKNRILIFVLYKREADRLWNSL-KHEWNCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAGKSGIAHTFF 460

HSP 2 Score: 181.415 bits (459), Expect = 1.222e-49
Identity = 101/231 (43.72%), Postives = 143/231 (61.90%), Query Frame = 0 
Query:  438 LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSAN--ASTLVQRVFEV--EKGRKTALLAHLIQQHEWR-QALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLI 663
            L+ G +ILVATPGRLLDL     + L  V  +VLDEADRML  GF +++  IL     ++QT LFSAT+P+ ++ L HE L  PI+V + S +  A   V ++ EV  E+ R   +   L + H+ + + LIFV  K   + L + L K        HGDK Q +R + +E+FKSG+I +LIATD+AARGLDI  +  V+N+  P +  DY+HRIGR+GRAG+ G+A +  
Sbjct:  231 LKSGVEILVATPGRLLDLAEEGCVDLSGVSYVVLDEADRMLDQGFEQDIRRILGQTHKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKTVTQIVEVVDERSRDGKIKGLLNKYHKKKNRILIFVLYKREADRLWNSL-KHEWNCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAGKSGIAHTFF 460
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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000011390 (supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1 gene:EMLSAG00000011390 transcript:EMLSAT00000011390 description:"augustus_masked-LSalAtl2s787-processed-gene-0.30")

HSP 1 Score: 216.083 bits (549), Expect = 9.991e-60
Identity = 137/416 (32.93%), Postives = 213/416 (51.20%), Query Frame = 0 
Query:   12 NFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQL--QSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQ-ALIFVNAKNSCEHLADKLYKRGIIAEV-----FHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHE 419
            N++  G+   ++  L    Y++PTPIQ Q IP +++GRD+I  A TGSGKT AF LPL + I     L+    +G+    +I+ PTREL  Q+   +K ++    GA ++VCV+GG  ++ Q+  L+ G +I+V TP                      G +                      D+L A  GR+ +          ++  +VLDEADRM  +GF  ++  I+      KQ ++FSATFP Q++ L   +L  P+EV +  +S     + Q V+ +E+  K   L  L+ Q       +IFV+ +   EH AD L K  + A        HG   Q  R  I+ +FK+G++ +L+AT +AARGLD+++L +V+N+D P    DY+HR GR+GRAG  G A + +  E
Sbjct:  223 NWTHAGVSQRILDLLKRNGYEKPTPIQTQAIPIIMSGRDMIGIAKTGSGKTLAFLLPLFRHIMAQPELE----EGDGPIAIIMTPTRELCMQIGKEIKKFSKAIKGA-RSVCVYGGTGISEQIAELKRGAEIIVCTP----------------------GRM---------------------IDMLAANSGRVTN--------CRRITYVVLDEADRMFDMGFEPQVSRIIDNCRPDKQMVMFSATFPRQMEALARRILCKPVEVTVGGRSVVCKDIDQSVYVLEEEHKFLKLLELLGQRSSEGLIIIFVDKQ---EH-ADSLLKDLMSASYTSCASLHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGNSGFAATFLTPE 578

HSP 2 Score: 154.066 bits (388), Expect = 6.300e-39
Identity = 88/240 (36.67%), Postives = 142/240 (59.17%), Query Frame = 0 
Query:  438 LRGGTDILVATPGRLLDLISSNAIKLD---KVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQL--QSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQ-ALIFVNAKNSCEHLADKLYKRGIIAEV-----FHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHE 666
            L+ G +I+V TPGR++D++++N+ ++    ++  +VLDEADRM  +GF  ++  I+      KQ ++FSATFP Q++ L   +L  P+EV +  +S     + Q V+ +E+  K   L  L+ Q       +IFV+ +   EH AD L K  + A        HG   Q  R  I+ +FK+G++ +L+AT +AARGLD+++L +V+N+D P    DY+HR GR+GRAG  G A + +  E
Sbjct:  343 LKRGAEIIVCTPGRMIDMLAANSGRVTNCRRITYVVLDEADRMFDMGFEPQVSRIIDNCRPDKQMVMFSATFPRQMEALARRILCKPVEVTVGGRSVVCKDIDQSVYVLEEEHKFLKLLELLGQRSSEGLIIIFVDKQ---EH-ADSLLKDLMSASYTSCASLHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGNSGFAATFLTPE 578
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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000000395 (supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:1 gene:EMLSAG00000000395 transcript:EMLSAT00000000395 description:"augustus_masked-LSalAtl2s1063-processed-gene-0.12")

HSP 1 Score: 206.838 bits (525), Expect = 3.509e-57
Identity = 153/462 (33.12%), Postives = 217/462 (46.97%), Query Frame = 0 
Query:   12 NFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSN-AIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSAN--ASTLVQRVFEVEKGRKT---ALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLDPLRGGTDILVATPGRLLDLISSNAIKLDKVK 467
            +F  + L  PL+  +  L Y  PTPIQA  IP  LAGRD+   A TG+GKTA + LP+L++                   L+  P                   N +I  V V                        VPTREL  QV    K  +  F  +I      GG+ +  Q  ALR   DI++ATPGRL+D I +     L+ ++ L+LDEADRML   F E++  I+K    K+QTLLFSAT  ++V  L+   L  P+++ + S    A  L Q    +   R++    +LA L+ +      ++F+  K  C  L   L   G+     HG+  Q  R   L+ FK  EIDVLI TD+AARGLDI  +  VIN+ LP +   Y+HR+GR+ RAG  G ++S+    D    + I K  +   DP++  T      P    D+IS    KL+ V+
Sbjct:  183 SFYAMXLSRPLLKAIEXLRYVHPTPIQASTIPVALAGRDVCGCAATGTGKTAXYMLPILER-------------------LLFRP-------------------NQSITRVIVL-----------------------VPTRELGVQVYQVSKQLS-QFT-SIDIALSVGGLDLKAQELALRKNPDIVIATPGRLIDHIKNTPTFGLENIEVLILDEADRMLDECFLEQMKEIVKSCSPKRQTLLFSATMTDKVNDLSTMALRKPVKIFVDSNKVVAWNLRQEFVRIRANRESDREGILAALVCRTFRDHTIVFIQTKVQCHRLLILLSLLGVRVGELHGNLSQPQRLESLKKFKEEEIDVLITTDVAARGLDISGVKTVINYTLPTTLEHYIHRVGRTARAGRAGRSVSIAGEGDRKMVREIVKNAR---DPVKART-----VPQ---DIISKYVQKLESVR 570

HSP 2 Score: 154.451 bits (389), Expect = 2.424e-39
Identity = 90/231 (38.96%), Postives = 131/231 (56.71%), Query Frame = 0 
Query:  438 LRGGTDILVATPGRLLDLISSN-AIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSAN--ASTLVQRVFEVEKGRKT---ALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSL 662
            LR   DI++ATPGRL+D I +     L+ ++ L+LDEADRML   F E++  I+K    K+QTLLFSAT  ++V  L+   L  P+++ + S    A  L Q    +   R++    +LA L+ +      ++F+  K  C  L   L   G+     HG+  Q  R   L+ FK  EIDVLI TD+AARGLDI  +  VIN+ LP +   Y+HR+GR+ RAG  G ++S+
Sbjct:  299 LRKNPDIVIATPGRLIDHIKNTPTFGLENIEVLILDEADRMLDECFLEQMKEIVKSCSPKRQTLLFSATMTDKVNDLSTMALRKPVKIFVDSNKVVAWNLRQEFVRIRANRESDREGILAALVCRTFRDHTIVFIQTKVQCHRLLILLSLLGVRVGELHGNLSQPQRLESLKKFKEEEIDVLITTDVAARGLDISGVKTVINYTLPTTLEHYIHRVGRTARAGRAGRSVSI 529
[Close]
BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000008048 (supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1 gene:EMLSAG00000008048 transcript:EMLSAT00000008048 description:"maker-LSalAtl2s479-augustus-gene-2.18")

HSP 1 Score: 201.445 bits (511), Expect = 3.458e-55
Identity = 145/447 (32.44%), Postives = 207/447 (46.31%), Query Frame = 0 
Query:    6 NTTTPTNFSDLGLISPLMARLTE-LEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLP----------------------SK---KQTLLFSATFPEQVKTLTHELLNDPIEVQLQSAN--ASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHF 424
            N   P        +SP +  + E + Y +PTPIQ Q IP  L  RD+I  A TGSGKT AF LP                        +LV  + L K                             T+M+    G   ++    PTRELA+Q+ +   ++       I TV V GG+S   Q   LR G +I++ATPGRL+D++ +  + L +   +VLDEADRM+ +GF  ++  IL  +P                      SK   +QT++F+AT P  V+ L    L  P  V + S       + Q V+ +++  K   L  ++        +IFVN K   + LA  L K G  A   HG KGQ  R   L   K+G  D+L+ATD+A RG+DI+ + +VIN+D+ +S   Y HRIGR+GRAG+ G A+S    ED   F
Sbjct:  318 NIPHPIRKWKEACLSPEILEIIEKVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTCAFLLP------------------------LLVWIQSLPK----------------------------TTRMEDQDQGPYAIIM--APTRELAQQIEEECNTFGGPL--GIXTVAVIGGLSREDQGFKLRLGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDNDEAENEAALLENIRSKNKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSIGRPVERVEQVVYMMKENDKRNKLISILNNGIEPPIIIFVNQKKGADKLAQGLEKMGYNAATLHGGKGQEQREYALSGLKAGNKDILVATDVAGRGIDIKNVSLVINYDMAKSIEPYTHRIGRTGRAGKSGKAISFCTQEDSPLF 708

HSP 2 Score: 154.451 bits (389), Expect = 2.700e-39
Identity = 94/261 (36.02%), Postives = 138/261 (52.87%), Query Frame = 0 
Query:  438 LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLP----------------------SK---KQTLLFSATFPEQVKTLTHELLNDPIEVQLQSAN--ASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHF 671
            LR G +I++ATPGRL+D++ +  + L +   +VLDEADRM+ +GF  ++  IL  +P                      SK   +QT++F+AT P  V+ L    L  P  V + S       + Q V+ +++  K   L  ++        +IFVN K   + LA  L K G  A   HG KGQ  R   L   K+G  D+L+ATD+A RG+DI+ + +VIN+D+ +S   Y HRIGR+GRAG+ G A+S    ED   F
Sbjct:  448 LRLGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDNDEAENEAALLENIRSKNKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSIGRPVERVEQVVYMMKENDKRNKLISILNNGIEPPIIIFVNQKKGADKLAQGLEKMGYNAATLHGGKGQEQREYALSGLKAGNKDILVATDVAGRGIDIKNVSLVINYDMAKSIEPYTHRIGRTGRAGKSGKAISFCTQEDSPLF 708
[Close]
BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000011452 (supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1 gene:EMLSAG00000011452 transcript:EMLSAT00000011452 description:"maker-LSalAtl2s790-augustus-gene-1.30")

HSP 1 Score: 200.675 bits (509), Expect = 6.113e-55
Identity = 134/383 (34.99%), Postives = 204/383 (53.26%), Query Frame = 0 
Query:  117 GAIKTVCVFGGVSVNTQMQ-ALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEV-QLQSANASTLVQRVFEV-EKG--RKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDY----HHFKIIEKKNKIRLDPLRGGTDILVATPGRLLDL-ISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAI 489
            G+ KT      + ++ Q Q  L  G   +    VPTRELA Q+    K +   ++  +  VC +GG S   Q +    G +I +ATPGR++D+I      L +V  LVLDEADRM  +GF  ++ +I   +   +QTLLFSATF ++V+ L  ++L DPI+V Q     AS  V ++ +V EKG  +   +L +L++       LIFV  K +CE LA  L  +    E+ HGD  Q  R  I+  FK  +  +L+ATD+AARGLDI  +  V+N+D+ R    + HRIGR+GRAG  G A +L+  +D     H  + +E+ N+          D+    P  L+DL + S+  K  + K     +  + + LGF E +D++
Sbjct:  323 GSGKTATFLWPIIIHIQHQRPLLNGEGPIALILVPTRELALQIYTEAKKFGKVYD--LNAVCAYGGGSKWEQSKCFESGAEIAIATPGRMIDMIKMKVTNLQRVTYLVLDEADRMFDMGFEAQVRSICDHVRPDRQTLLFSATFKKKVEKLARDVLTDPIKVVQGSIGEASEDVTQIVKVLEKGGYKWEWVLQNLVEFTSAGSVLIFVTKKLNCEELAQNLKLKEFECELIHGDLNQHVRNEIIYKFKKKQFPILVATDVAARGLDIPHIRTVLNYDIARDIDTHTHRIGRTGRAGIKGTAYTLVTEKDKEFAGHIVRNLEQANQ----------DV----PKELMDLAMQSSWFKNSRFKK---GKMGKTVGLGFKESVDSL 686

HSP 2 Score: 170.244 bits (430), Expect = 1.363e-44
Identity = 96/234 (41.03%), Postives = 139/234 (59.40%), Query Frame = 0 
Query:  438 LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEV-QLQSANASTLVQRVFEV-EKG--RKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHED 667
               G +I +ATPGR++D+I      L +V  LVLDEADRM  +GF  ++ +I   +   +QTLLFSATF ++V+ L  ++L DPI+V Q     AS  V ++ +V EKG  +   +L +L++       LIFV  K +CE LA  L  +    E+ HGD  Q  R  I+  FK  +  +L+ATD+AARGLDI  +  V+N+D+ R    + HRIGR+GRAG  G A +L+  +D
Sbjct:  396 FESGAEIAIATPGRMIDMIKMKVTNLQRVTYLVLDEADRMFDMGFEAQVRSICDHVRPDRQTLLFSATFKKKVEKLARDVLTDPIKVVQGSIGEASEDVTQIVKVLEKGGYKWEWVLQNLVEFTSAGSVLIFVTKKLNCEELAQNLKLKEFECELIHGDLNQHVRNEIIYKFKKKQFPILVATDVAARGLDIPHIRTVLNYDIARDIDTHTHRIGRTGRAGIKGTAYTLVTEKD 629
[Close]
BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000002581 (supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803:-1 gene:EMLSAG00000002581 transcript:EMLSAT00000002581 description:"maker-LSalAtl2s151-snap-gene-13.39")

HSP 1 Score: 194.897 bits (494), Expect = 1.195e-54
Identity = 104/276 (37.68%), Postives = 165/276 (59.78%), Query Frame = 0 
Query:  150 PTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELL--NDPIEVQLQSAN--ASTLVQRVFE-VEKGRKTALLAHLIQ---QHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLID 417
            PTRELA+Q+ + V  +A      I T C+ GG     Q++ L  G +I+VATPGRL+DL+    + L +   +VLDEADRML +GF  ++  I++ +   +Q L++SAT+P +V++L H+     D   V + S+   A+ L+ + F+  E+  K   +  +++   + + ++ LIF   K   + L  KL     + +  HGDK Q  RTR L+ F+SG I++L+ATD+A+RGLD+  + VVIN+D P +  DY+HRIGR+GR  + G + S  D
Sbjct:  160 PTRELAEQIHNVVDGFA----SKIPTACLVGGNHKQGQIRDLNRGAEIVVATPGRLIDLMEDGDVDLKRCSYMVLDEADRMLDMGFEPQIRKIMRQVRPDRQLLMWSATWPSEVQSLAHDFFGGTDYAHVNIGSSELXANKLIMQDFKFCERFEKMDSIKEILESLSEVESKKVLIFAATKIRVDQLVRKLKYWNFVVDGIHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVINYDFPNNIEDYVHRIGRTGRCSKEGKSFSFFD 431

HSP 2 Score: 172.94 bits (437), Expect = 8.579e-47
Identity = 93/244 (38.11%), Postives = 148/244 (60.66%), Query Frame = 0 
Query:  429 KKNKIRLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELL--NDPIEVQLQSAN--ASTLVQRVFE-VEKGRKTALLAHLIQ---QHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLID 664
            K+ +IR   L  G +I+VATPGRL+DL+    + L +   +VLDEADRML +GF  ++  I++ +   +Q L++SAT+P +V++L H+     D   V + S+   A+ L+ + F+  E+  K   +  +++   + E ++ LIF   K   + L  KL     + +  HGDK Q  RTR L+ F+SG I++L+ATD+A+RGLD+  + VVIN+D P +  DY+HRIGR+GR  + G + S  D
Sbjct:  190 KQGQIR--DLNRGAEIVVATPGRLIDLMEDGDVDLKRCSYMVLDEADRMLDMGFEPQIRKIMRQVRPDRQLLMWSATWPSEVQSLAHDFFGGTDYAHVNIGSSELXANKLIMQDFKFCERFEKMDSIKEILESLSEVESKKVLIFAATKIRVDQLVRKLKYWNFVVDGIHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVINYDFPNNIEDYVHRIGRTGRCSKEGKSFSFFD 431
[Close]
BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000000249 (supercontig:LSalAtl2s:LSalAtl2s1036:82728:88820:1 gene:EMLSAG00000000249 transcript:EMLSAT00000000249 description:"maker-LSalAtl2s1036-augustus-gene-0.32")

HSP 1 Score: 192.2 bits (487), Expect = 2.384e-54
Identity = 126/432 (29.17%), Postives = 199/432 (46.06%), Query Frame = 0 
Query:    8 TTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSA-NASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLDPL 438
            T    F D  L    +  + E  +++P+PIQ   IP  L+GRD++A A  G+GKT A+++P+L+QI             + + G+I+VPTRELA Q +      + H N  +K +   GG ++   +  +     ++VATP    +L ++    V +         K +C                                              LDEAD++L   F   LD +++ LP ++Q LL SATFP  V+      +  P EV L        + Q    V++ +K   L  L  + Q  Q++IF N+    E LA K+ + G      H    Q  R R+  DF++G    L+ +D+  RG+DI+ + VVINFD P+    Y+HRIGRSGR G +G+A++LI ++D      IE +    + P+
Sbjct:   48 TKGNEFEDFCLKRETLMGIFEKGWEKPSPIQEASIPVALSGRDILARAKNGTGKTGAYSIPILEQI---------DPSNDVIQGMIIVPTRELALQTSQICIELSKHRN--VKVMVTTGGTNLKEDIMRIYEKVHLVVATPGRILDLIEKGVAKVMN--------CKVIC----------------------------------------------LDEADKLLGHDFKGMLDRLIEHLPERRQILLXSATFPLTVEYFMKRHMKSPYEVNLMDELTLKGITQYYAFVQERQKVHCLNTLFTKLQINQSIIFCNSTQRVELLAKKITELGYSCYYIHAKMAQTHRNRVFHDFRAGLCRNLVCSDLFTRGIDIQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFLLHRIEGELGTEIKPI 414

HSP 2 Score: 162.54 bits (410), Expect = 1.031e-43
Identity = 85/225 (37.78%), Postives = 127/225 (56.44%), Query Frame = 0 
Query:  444 ILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSA-NASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHED 667
            ++VATPGR+LDLI     K+   K + LDEAD++L   F   LD +++ LP ++Q LL SATFP  V+      +  P EV L        + Q    V++ +K   L  L  + +  Q++IF N+    E LA K+ + G      H    Q  R R+  DF++G    L+ +D+  RG+DI+ + VVINFD P+    Y+HRIGRSGR G +G+A++LI ++D
Sbjct:  172 LVVATPGRILDLIEKGVAKVMNCKVICLDEADKLLGHDFKGMLDRLIEHLPERRQILLXSATFPLTVEYFMKRHMKSPYEVNLMDELTLKGITQYYAFVQERQKVHCLNTLFTKLQINQSIIFCNSTQRVELLAKKITELGYSCYYIHAKMAQTHRNRVFHDFRAGLCRNLVCSDLFTRGIDIQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDD 396
[Close]
BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000005110 (supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1 gene:EMLSAG00000005110 transcript:EMLSAT00000005110 description:"maker-LSalAtl2s26-augustus-gene-8.40")

HSP 1 Score: 194.512 bits (493), Expect = 1.923e-53
Identity = 109/285 (38.25%), Postives = 164/285 (57.54%), Query Frame = 0 
Query:  149 VPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILK---LLPS-KKQTLLFSATFPEQVKTLTHELLNDPI--EVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQA----------LIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLID 417
             PTRELA Q+ D  K +A  +   ++   V+GG +V  QM  L  G  +LVATPGRL+D++    I L++ K LVLDEADRML +GF  ++  I++   + P+ ++QTL+FSATFP++++ L  + L + I   V    + +  + Q++  V++  K + L  L++     +           L+FV  +   + L + LYK G      HGD+ Q  R   L  F+SG   +L+AT +AARGLDI  +  VINFDLP    +Y+HRIGR+GR G +GLA S  +
Sbjct:  269 APTRELATQIFDEAKKFA--YRSLVQPCVVYGGANVFEQMMDLDRGCHLLVATPGRLVDMLDRGKISLEQCKYLVLDEADRMLDMGFEPQIRKIVENDNMPPAGQRQTLMFSATFPKEIQMLARDFLANYIFLAVGRVGSTSENITQKIVWVDELDKRSFLLDLLEAAGLAKGPAGNEDSSLTLVFVETRKGADQLDEYLYKEGFPVTSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGRMGNLGLATSFFN 551

HSP 2 Score: 166.392 bits (420), Expect = 1.135e-43
Identity = 92/240 (38.33%), Postives = 140/240 (58.33%), Query Frame = 0 
Query:  441 GTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILK---LLPS-KKQTLLFSATFPEQVKTLTHELLNDPI--EVQLQSANASTLVQRVFEVEKGRKTALLAHLIQ----------QHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLID 664
            G  +LVATPGRL+D++    I L++ K LVLDEADRML +GF  ++  I++   + P+ ++QTL+FSATFP++++ L  + L + I   V    + +  + Q++  V++  K + L  L++            +    L+FV  +   + L + LYK G      HGD+ Q  R   L  F+SG   +L+AT +AARGLDI  +  VINFDLP    +Y+HRIGR+GR G +GLA S  +
Sbjct:  312 GCHLLVATPGRLVDMLDRGKISLEQCKYLVLDEADRMLDMGFEPQIRKIVENDNMPPAGQRQTLMFSATFPKEIQMLARDFLANYIFLAVGRVGSTSENITQKIVWVDELDKRSFLLDLLEAAGLAKGPAGNEDSSLTLVFVETRKGADQLDEYLYKEGFPVTSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGRMGNLGLATSFFN 551
[Close]
BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000007141 (supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1 gene:EMLSAG00000007141 transcript:EMLSAT00000007141 description:"maker-LSalAtl2s402-augustus-gene-4.12")

HSP 1 Score: 187.578 bits (475), Expect = 6.082e-53
Identity = 126/443 (28.44%), Postives = 210/443 (47.40%), Query Frame = 0 
Query:   10 PTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWR--------------QALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLDPL 438
            PT F  +GL   L+  +    +++P+ IQ + I  +L GRD+IA A +G+GKTA F++ +LQ I  D  +            L+L PTRELA Q+   + +   + N  ++     GG ++   ++ L  G  ++  TP        +V D ++   +   G                                               +K LVLDEAD ML+ GF E++  + + LP   Q  L SAT P ++  +T + + DPI +         LV+R     +G K   +A  +++ +W+              QA+IF N K   + L +K+ +        HGD  Q  R  I+++F+SG+  VLI TD+ ARG+D++++ +VIN+DLP +   Y+HRIGRSGR G  G+A++ + ++D    + IE+    ++D +
Sbjct:   28 PT-FDSMGLREDLLRGIYAYGFEKPSAIQQRSIKPILKGRDVIAQAQSGTGKTATFSISILQSI--DTTMRE-------TQCLVLSPTRELAVQIQKVLLALGDYMN--VQCHACIGGTNLGEDIRKLDYGQHVVSGTP-------GRVYDMIRRRTLRTRG-----------------------------------------------IKMLVLDEADEMLNKGFKEQIYDVYRYLPPFTQIALISATLPHEILEMTSKFMADPIRI---------LVKRDELTLEGXKQFFVA--VEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM 393

HSP 2 Score: 161.384 bits (407), Expect = 1.151e-43
Identity = 87/250 (34.80%), Postives = 139/250 (55.60%), Query Frame = 0 
Query:  441 GTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWR--------------QALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEK 676
            G  ++  TPGR+ D+I    ++   +K LVLDEAD ML+ GF E++  + + LP   Q  L SAT P ++  +T + + DPI +         LV+R     +G K   +A  +++ EW+              QA+IF N K   + L +K+ +        HGD  Q  R  I+++F+SG+  VLI TD+ ARG+D++++ +VIN+DLP +   Y+HRIGRSGR G  G+A++ + ++D      IE+
Sbjct:  146 GQHVVSGTPGRVYDMIRRRTLRTRGIKMLVLDEADEMLNKGFKEQIYDVYRYLPPFTQIALISATLPHEILEMTSKFMADPIRI---------LVKRDELTLEGXKQFFVA--VEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRDIEQ 384
[Close]
BLAST of rna helicase vs. SwissProt
Match: gi|548730|sp|P25888.3|RHLE_ECOLI (RecName: Full=ATP-dependent RNA helicase RhlE)

HSP 1 Score: 308.145 bits (788), Expect = 5.081e-96
Identity = 176/421 (41.81%), Postives = 247/421 (58.67%), Query Frame = 0 
Query:   12 NFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNF-VSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEK 429
            +F  LGL   ++  + E  Y++PTPIQ Q IP+VL GRDL+A A TG+GKTA F LPLLQ +    P      KG   V  LIL PTRELA Q+ ++V+ Y+ + N  I+++ VFGGVS+N QM  LRGG D+LVATP    +L  Q  ++VK   V                             +++    R+LD+                         GF  ++  +L  LP+K+Q LLFSATF + +K L  +LL++P+E+++   N ++  + Q V  V+K RK  LL+H+I +  W+Q L+F   K+   HLA++L K GI +   HG+K QG+RTR L DFKSG+I VL+ATDIAARGLDIE+LP V+N++LP  P DY+HRIGR+GRA   G ALSL+  +++   + IEK
Sbjct:    2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQP----HAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN--IRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQ--NAVKLDQVEI---------------------------LVLDEADRMLDM-------------------------GFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEK 362

HSP 2 Score: 270.011 bits (689), Expect = 1.450e-81
Identity = 135/258 (52.33%), Postives = 183/258 (70.93%), Query Frame = 0 
Query:  438 LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVD 693
            LRGG D+LVATPGRLLDL   NA+KLD+V+ LVLDEADRML +GF  ++  +L  LP+K+Q LLFSATF + +K L  +LL++P+E+++   N ++  + Q V  V+K RK  LL+H+I +  W+Q L+F   K+   HLA++L K GI +   HG+K QG+RTR L DFKSG+I VL+ATDIAARGLDIE+LP V+N++LP  P DY+HRIGR+GRA   G ALSL+  +++     IEK  K  + R  I G+E D
Sbjct:  122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPD 379
[Close]
BLAST of rna helicase vs. SwissProt
Match: gi|32171494|sp|Q8XA87.3|DEAD_ECO57 (RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A)

HSP 1 Score: 265.774 bits (678), Expect = 4.828e-78
Identity = 154/427 (36.07%), Postives = 233/427 (54.57%), Query Frame = 0 
Query:   11 TNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHED--APLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKI 433
            T F+DLGL +P++  L +L Y++P+PIQA+ IP +L GRD++  A TGSGKTAAF+LPLLQ +  +  AP             L+L PTRELA QVA+++  ++ H  G +  V ++GG   + Q++ALR G  I+V TP        ++ D +K                            RG  D                   L K+  LVLDEAD ML +GF E+++ I+  +P   QT LFSAT PE ++ +T   + +P EV++QS+  +   + Q  + V   RK   L   ++   +  A+IFV  KN+   +A+ L + G  +   +GD  Q  R + LE  K G +D+LIATD+AARGLD+E++ +V+N+D+P     Y+HRIGR+GRAG  G AL  +++ +    + IE+  K+
Sbjct:    6 TTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAP-----------QILVLAPTRELAVQVAEAMTDFSKHMRG-VNVVALYGGQRYDVQLRALRQGPQIVVGTP-------GRLLDHLK----------------------------RGTLD-------------------LSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKL 366

HSP 2 Score: 197.593 bits (501), Expect = 3.524e-53
Identity = 99/254 (38.98%), Postives = 154/254 (60.63%), Query Frame = 0 
Query:  429 KKNKIRLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKI 680
            ++  ++L  LR G  I+V TPGRLLD +    + L K+  LVLDEAD ML +GF E+++ I+  +P   QT LFSAT PE ++ +T   + +P EV++QS+  +   + Q  + V   RK   L   ++  ++  A+IFV  KN+   +A+ L + G  +   +GD  Q  R + LE  K G +D+LIATD+AARGLD+E++ +V+N+D+P     Y+HRIGR+GRAG  G AL  +++ +      IE+  K+
Sbjct:  113 QRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKL 366
[Close]
BLAST of rna helicase vs. SwissProt
Match: gi|71154182|sp|P0A9P7.2|DEAD_ECOL6 (RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A >gi|71154193|sp|P0A9P6.2|DEAD_ECOLI RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A; AltName: Full=Translation factor W2 >gi|71154222|sp|P0A9P8.2|DEAD_SHIFL RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A)

HSP 1 Score: 265.774 bits (678), Expect = 5.637e-78
Identity = 154/427 (36.07%), Postives = 233/427 (54.57%), Query Frame = 0 
Query:   11 TNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHED--APLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKI 433
            T F+DLGL +P++  L +L Y++P+PIQA+ IP +L GRD++  A TGSGKTAAF+LPLLQ +  +  AP             L+L PTRELA QVA+++  ++ H  G +  V ++GG   + Q++ALR G  I+V TP        ++ D +K                            RG  D                   L K+  LVLDEAD ML +GF E+++ I+  +P   QT LFSAT PE ++ +T   + +P EV++QS+  +   + Q  + V   RK   L   ++   +  A+IFV  KN+   +A+ L + G  +   +GD  Q  R + LE  K G +D+LIATD+AARGLD+E++ +V+N+D+P     Y+HRIGR+GRAG  G AL  +++ +    + IE+  K+
Sbjct:    6 TTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAP-----------QILVLAPTRELAVQVAEAMTDFSKHMRG-VNVVALYGGQRYDVQLRALRQGPQIVVGTP-------GRLLDHLK----------------------------RGTLD-------------------LSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKL 366

HSP 2 Score: 197.593 bits (501), Expect = 4.207e-53
Identity = 99/254 (38.98%), Postives = 154/254 (60.63%), Query Frame = 0 
Query:  429 KKNKIRLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKI 680
            ++  ++L  LR G  I+V TPGRLLD +    + L K+  LVLDEAD ML +GF E+++ I+  +P   QT LFSAT PE ++ +T   + +P EV++QS+  +   + Q  + V   RK   L   ++  ++  A+IFV  KN+   +A+ L + G  +   +GD  Q  R + LE  K G +D+LIATD+AARGLD+E++ +V+N+D+P     Y+HRIGR+GRAG  G AL  +++ +      IE+  K+
Sbjct:  113 QRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKL 366
[Close]
BLAST of rna helicase vs. SwissProt
Match: gi|8928554|sp|P33906.3|DEAD_KLEPN (RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A)

HSP 1 Score: 265.003 bits (676), Expect = 1.187e-77
Identity = 154/427 (36.07%), Postives = 232/427 (54.33%), Query Frame = 0 
Query:   11 TNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHED--APLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKI 433
            T F+DLGL +P++  LT+L Y++P+PIQA+ IP +L GRD++  A TGSGKTAAF+LPLL  I  +  AP             L+L PTRELA QVA+++  ++ H  G +  V ++GG   + Q++ALR G  I+V TP        ++ D +K                            RG  D                   L K+  LVLDEAD ML +GF E+++ I+  +P   QT LFSAT PE ++ +T   + +P EV++QS+  +   + Q  +     RK   L   ++   +  A+IFV  KN+   +A+ L + G  +   +GD  Q  R + LE  K G +D+LIATD+AARGLD+E++ +V+N+D+P     Y+HRIGR+GRAG  G AL  +++ +    + IE+  K+
Sbjct:    6 TTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAFSLPLLNNIDPELRAP-----------QILVLAPTRELAVQVAEAMTEFSKHMRG-VNVVALYGGQRYDVQLRALRQGPQIVVGTP-------GRLLDHLK----------------------------RGTLD-------------------LSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQALERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKL 366

HSP 2 Score: 195.667 bits (496), Expect = 1.962e-52
Identity = 98/254 (38.58%), Postives = 153/254 (60.24%), Query Frame = 0 
Query:  429 KKNKIRLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKI 680
            ++  ++L  LR G  I+V TPGRLLD +    + L K+  LVLDEAD ML +GF E+++ I+  +P   QT LFSAT PE ++ +T   + +P EV++QS+  +   + Q  +     RK   L   ++  ++  A+IFV  KN+   +A+ L + G  +   +GD  Q  R + LE  K G +D+LIATD+AARGLD+E++ +V+N+D+P     Y+HRIGR+GRAG  G AL  +++ +      IE+  K+
Sbjct:  113 QRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQALERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKL 366
[Close]
BLAST of rna helicase vs. SwissProt
Match: gi|134039178|sp|P96614.2|CSHA_BACSU (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 247.284 bits (630), Expect = 1.839e-72
Identity = 141/432 (32.64%), Postives = 226/432 (52.31%), Query Frame = 0 
Query:   13 FSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDP--IEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLDPLRGGT 442
            F D  L S LM  +  + +++ TPIQAQ IP  L+ +D+I  A TG+GKTAAF +PL+++I+ ++P          +  +++ PTRELA QV++ +  Y +  +   K + ++GG  +  Q++AL+   +I+V TP        ++ D +    +  N                                                V T+V+DEAD ML++GF +++++IL  +PS+ QTLLFSAT P  +K +    + +P  ++V+ +    S + Q   EV++ +K   L  L+       A++F   K   + LA+ L  RG  AE  HGD  Q  R   L  FK G I+VL+ATD+AARGLDI  +  V NFD+P+ P  Y+HRIGR+GRAG+ G+A++ I   +    + IE+  K ++D ++  T
Sbjct:    5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESP---------NIQAIVIAPTRELAIQVSEEL--YKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNIIVGTP-------GRLLDHINRRTIRLNN-----------------------------------------------VNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTTKRKMDRMKEPT 371

HSP 2 Score: 201.06 bits (510), Expect = 1.643e-55
Identity = 102/249 (40.96%), Postives = 153/249 (61.45%), Query Frame = 0 
Query:  438 LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDP--IEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLER 684
            L+   +I+V TPGRLLD I+   I+L+ V T+V+DEAD ML++GF +++++IL  +PS+ QTLLFSAT P  +K +    + +P  ++V+ +    S + Q   EV++ +K   L  L+       A++F   K   + LA+ L  RG  AE  HGD  Q  R   L  FK G I+VL+ATD+AARGLDI  +  V NFD+P+ P  Y+HRIGR+GRAG+ G+A++ I   +      IE+  K +++R
Sbjct:  118 LKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTTKRKMDR 366
[Close]
BLAST of rna helicase vs. SwissProt
Match: gi|81675946|sp|Q5L3G9.1|CSHA_GEOKA (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 243.817 bits (621), Expect = 1.383e-71
Identity = 141/432 (32.64%), Postives = 230/432 (53.24%), Query Frame = 0 
Query:   11 TNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDP--IEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHED---YHHFKIIEKKNKIRLDP 437
            T F +LGL   +M  +  + +++ TPIQA+ IP  L  +D+I  A TG+GKTAAF +P+++++         + K + V  L++ PTRELA QV++ +  Y +     ++ + ++GG  +  Q++AL+    ++V TP        ++ D       H N                     RG                    ++L+ V T+VLDEAD ML++GF E+++AIL  +P+++QTLLFSAT P+ ++ +    +N+P  ++V+ +      + Q   EV + +K  +L  L+       A++F   K   + LA+ L  RG  AE  HGD  Q  R  +L  FK G I++L+ATD+AARGLDI  +  V NFD+P+ P  Y+HRIGR+GRAG+ G+A++ +   +    HH +   K+   R+ P
Sbjct:    2 TTFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKV---------NVKNSAVQALVVAPTRELAIQVSEEL--YKIGAVKRVRVLPIYGGQDIERQIRALKKHPHVIVGTP-------GRIID-------HIN---------------------RG-------------------TLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKMERMKP 368

HSP 2 Score: 205.297 bits (521), Expect = 2.659e-57
Identity = 103/269 (38.29%), Postives = 162/269 (60.22%), Query Frame = 0 
Query:  431 NKIRLDPLRGGTDI-------------LVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDP--IEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLER 684
             ++R+ P+ GG DI             +V TPGR++D I+   ++L+ V T+VLDEAD ML++GF E+++AIL  +P+++QTLLFSAT P+ ++ +    +N+P  ++V+ +      + Q   EV + +K  +L  L+       A++F   K   + LA+ L  RG  AE  HGD  Q  R  +L  FK G I++L+ATD+AARGLDI  +  V NFD+P+ P  Y+HRIGR+GRAG+ G+A++ +   +      IE+  K ++ER
Sbjct:   97 KRVRVLPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKMER 365
[Close]
BLAST of rna helicase vs. SwissProt
Match: gi|75535255|sp|Q9Z6C9.1|CSHA_LACRE (RecName: Full=ATP-dependent RNA helicase CshA; AltName: Full=Autoaggregation-mediating protein)

HSP 1 Score: 243.047 bits (619), Expect = 6.413e-71
Identity = 144/432 (33.33%), Postives = 226/432 (52.31%), Query Frame = 0 
Query:   13 FSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST-LVQRVF-EVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLDPLRGGT 442
            FS+LGL   L+  +    Y++ TPIQ Q IP VL G+D+I  A TG+GKTAAF LP+++ +  + P          +  +I+ PTRELA Q  + +  Y +  +  ++   V+GG  +  Q+++L+    ILV TP   R+              H N                                         + +KLD +KTLVLDEAD ML++GF E++++I+K  P  +QTLLFSAT P ++K +  + ++DP  V++++   +T LV + +       K  ++  LI        ++F   K   + L+  L  RG  A   HGD  Q  R++I+  FK+ E+D+L+ATD+AARGLDI  +  V N+D+P  P  Y+HRIGR+GRAG  G++L+ +   +  +   IEK  ++R+ PL+  T
Sbjct:    3 FSELGLSDSLLKAIKRSGYEEATPIQEQTIPMVLEGKDVIGQAQTGTGKTAAFGLPIIENVDTENP---------NIQAIIISPTRELAIQTQEEL--YRLGKDKHVRVQVVYGGADIRRQIKSLKQHPQILVGTPGRLRD--------------HIN----------------------------------------RHTVKLDHIKTLVLDEADEMLNMGFLEDIESIIKETPDDRQTLLFSATMPPEIKRIGVQFMSDPETVRIKAKELTTDLVDQYYVRARDYEKFDIMTRLIDVQDPDLTIVFGRTKRRVDELSKGLIARGYNAAGIHGDLTQDKRSKIMWKFKNNELDILVATDVAARGLDISGVTHVYNYDIPSDPDSYVHRIGRTGRAGHHGVSLTFVTPNEMDYLHEIEKLTRVRMLPLKPPT 369

HSP 2 Score: 192.2 bits (487), Expect = 3.286e-52
Identity = 103/269 (38.29%), Postives = 160/269 (59.48%), Query Frame = 0 
Query:  429 KKNKIRLDPLRGGTDI-------------LVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST-LVQRVF-EVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRL 682
            K   +R+  + GG DI             LV TPGRL D I+ + +KLD +KTLVLDEAD ML++GF E++++I+K  P  +QTLLFSAT P ++K +  + ++DP  V++++   +T LV + +       K  ++  LI   +    ++F   K   + L+  L  RG  A   HGD  Q  R++I+  FK+ E+D+L+ATD+AARGLDI  +  V N+D+P  P  Y+HRIGR+GRAG  G++L+ +   +  +   IEK  ++R+
Sbjct:   94 KDKHVRVQVVYGGADIRRQIKSLKQHPQILVGTPGRLRDHINRHTVKLDHIKTLVLDEADEMLNMGFLEDIESIIKETPDDRQTLLFSATMPPEIKRIGVQFMSDPETVRIKAKELTTDLVDQYYVRARDYEKFDIMTRLIDVQDPDLTIVFGRTKRRVDELSKGLIARGYNAAGIHGDLTQDKRSKIMWKFKNNELDILVATDVAARGLDISGVTHVYNYDIPSDPDSYVHRIGRTGRAGHHGVSLTFVTPNEMDYLHEIEKLTRVRM 362
[Close]
BLAST of rna helicase vs. SwissProt
Match: gi|143456452|sp|Q0DB53.2|RH52A_ORYSJ (RecName: Full=DEAD-box ATP-dependent RNA helicase 52A)

HSP 1 Score: 243.432 bits (620), Expect = 5.185e-70
Identity = 150/425 (35.29%), Postives = 225/425 (52.94%), Query Frame = 0 
Query:   12 NFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLL--PSK--KQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQH---------QWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDY 421
             F   GL+  ++  +    Y+ PTP+Q   +P  LAGRDL+A A TGSGKTAAF LP+                   VSGL+      +  +   S       FN A              + +AL     +L     PTRELA Q+ +  K ++  F   ++ V  +GG  +  Q++ L  G DILVATPGRL+D++  + + L+ +K LV+DEADRML +GF  ++  I++ +  P K  +QT+LFSATFP +++ L  + L++ I + +    +ST  ++Q+V  +  G K   L  L+Q+          Q    L+FV  K   + L   LY +G  A   HGD+ Q  R   L  FK+G   +++ATD+A+RGLD+  +  VIN+DLP+S  DY+HRIGR+GRAG+ G A +     D+
Sbjct:   85 GFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTGSGKTAAFCLPV-------------------VSGLVAAGGSGIGHRERSS-------FNRAA------------AKPRAL-----VLA----PTRELAAQINEEAKKFS--FQTGLRVVVAYGGTPMYNQLRDLERGADILVATPGRLVDMVERSKVSLEAIKYLVMDEADRMLDMGFEPQIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDFLSNYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLVFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDH 460

HSP 2 Score: 182.57 bits (462), Expect = 5.240e-48
Identity = 99/250 (39.60%), Postives = 150/250 (60.00%), Query Frame = 0 
Query:  434 RLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLL--PSK--KQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQHEWRQA---------LIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDY 668
            +L  L  G DILVATPGRL+D++  + + L+ +K LV+DEADRML +GF  ++  I++ +  P K  +QT+LFSATFP +++ L  + L++ I + +    +ST  ++Q+V  +  G K   L  L+Q+     A         L+FV  K   + L   LY +G  A   HGD+ Q  R   L  FK+G   +++ATD+A+RGLD+  +  VIN+DLP+S  DY+HRIGR+GRAG+ G A +     D+
Sbjct:  211 QLRDLERGADILVATPGRLVDMVERSKVSLEAIKYLVMDEADRMLDMGFEPQIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDFLSNYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLVFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDH 460
[Close]
BLAST of rna helicase vs. SwissProt
Match: gi|74660335|sp|Q6CLR3.1|DED1_KLULA (RecName: Full=ATP-dependent RNA helicase DED1)

HSP 1 Score: 243.047 bits (619), Expect = 1.220e-69
Identity = 148/394 (37.56%), Postives = 204/394 (51.78%), Query Frame = 0 
Query:   31 YQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKL--LPS--KKQTLLFSATFPEQVKTLTHELLNDPI--EVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDH 418
            + +PTP+Q   +P V AGRDL+A A TGSGKT  F  P+L +     P       GN                      SY       IK V                  T +++A   PTRELA Q+ D  K +   +   +K + V+GG S++ Q++ +R G ++LVATPGRL DL+    I L  VK LVLDEADRML +GF  ++  I++   +PS   +QTL+FSATFP +++ L  + L D +   V    + +  + Q++  VE   K   L  L+        LIFV  K + + L D L   G  A   HGD+ QG R R L  FK+G   +L+AT +AARGLDI  +  VINFDLP    DY+HRIGR+GRAG  G+A +  + 
Sbjct:  179 FTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGN----------------------SY-------IKKVYP----------------TAVILA---PTRELATQIYDEAKKFT--YRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNR 522

HSP 2 Score: 182.956 bits (463), Expect = 5.506e-48
Identity = 101/234 (43.16%), Postives = 137/234 (58.55%), Query Frame = 0 
Query:  438 LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKL--LPS--KKQTLLFSATFPEQVKTLTHELLNDPI--EVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDH 665
            +R G ++LVATPGRL DL+    I L  VK LVLDEADRML +GF  ++  I++   +PS   +QTL+FSATFP +++ L  + L D +   V    + +  + Q++  VE   K   L  L+        LIFV  K + + L D L   G  A   HGD+ QG R R L  FK+G   +L+AT +AARGLDI  +  VINFDLP    DY+HRIGR+GRAG  G+A +  + 
Sbjct:  289 MRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNR 522
[Close]
BLAST of rna helicase vs. SwissProt
Match: gi|122206897|sp|Q2R1M8.1|RH52C_ORYSJ (RecName: Full=DEAD-box ATP-dependent RNA helicase 52C)

HSP 1 Score: 242.276 bits (617), Expect = 2.540e-69
Identity = 148/423 (34.99%), Postives = 218/423 (51.54%), Query Frame = 0 
Query:   13 FSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLL----PSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQHQWRQA---------LIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHED 420
            F+++ L   L   +   +Y +PTP+Q   IP  LAGRDL+A A TGSGKTAAF  P++  I    P  R              P R                  G ++T C                    L+ +P  TREL+ Q+ +  + ++  +   ++ V  +GG  +N Q++ L  G DILVATPGRL+DL+    + L  ++ L LDEADRML +GF  ++  I++ +    P  +QT+LFSATFP++++ +  + L + I + +    +ST  +VQRV  V++  K + L  L+  H  R +         L+FV  K   + L   L   G  A   HGD+ Q  R   L  FKSG   +L+ATD+AARGLDI  +  V+NFDLP    DY+HRIGR+GRAG+ GLA +  +  +
Sbjct:  157 FAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQR--------------PQR------------------GGMRTACPLA-----------------LILSP--TRELSMQIHEEARKFS--YQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYLALDEADRMLDMGFEPQVRRIVEQMDMPPPGARQTMLFSATFPKEIQRMASDFLENYIFLAVGRVGSSTDLIVQRVEFVQEADKRSHLMDLL--HAQRDSATPGKPTLTLVFVETKRGADSLEHWLCMNGFPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENN 524

HSP 2 Score: 177.948 bits (450), Expect = 3.204e-46
Identity = 100/245 (40.82%), Postives = 143/245 (58.37%), Query Frame = 0 
Query:  438 LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLL----PSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANAST--LVQRVFEVEKGRKTALLAHLIQQHEWRQA---------LIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHED 667
            L  G DILVATPGRL+DL+    + L  ++ L LDEADRML +GF  ++  I++ +    P  +QT+LFSATFP++++ +  + L + I + +    +ST  +VQRV  V++  K + L  L+  H  R +         L+FV  K   + L   L   G  A   HGD+ Q  R   L  FKSG   +L+ATD+AARGLDI  +  V+NFDLP    DY+HRIGR+GRAG+ GLA +  +  +
Sbjct:  282 LERGVDILVATPGRLVDLLERARVSLQSIRYLALDEADRMLDMGFEPQVRRIVEQMDMPPPGARQTMLFSATFPKEIQRMASDFLENYIFLAVGRVGSSTDLIVQRVEFVQEADKRSHLMDLL--HAQRDSATPGKPTLTLVFVETKRGADSLEHWLCMNGFPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENN 524
[Close]
BLAST of rna helicase vs. nr
Match: gi|656279300|ref|WP_029224953.1| (ATP-dependent helicase [Vibrio splendidus] >gi|1067294233|gb|OED73362.1| RNA helicase [Vibrio splendidus ZS-139])

HSP 1 Score: 725.317 bits (1871), Expect = 0.000e+0
Identity = 369/433 (85.22%), Postives = 374/433 (86.37%), Query Frame = 0 
Query:    4 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 436
            MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGN+VSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP        ++ D + S A+                                               KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD
Sbjct:    1 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNYVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP-------GRLLDLISSNAI-----------------------------------------------KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 379

HSP 2 Score: 573.548 bits (1477), Expect = 0.000e+0
Identity = 282/299 (94.31%), Postives = 289/299 (96.66%), Query Frame = 0 
Query:  434 RLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTGKKKK-KKAPKNQDVWLRN 731
            ++  LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQH+WRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHF IIEKKNKIRL+REQ+EGFEVDEEA A LVAALKPVAPP GTGKKKK KKA  N D+WLR+
Sbjct:  130 QMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLDREQVEGFEVDEEAAAELVAALKPVAPPEGTGKKKKNKKAQTNHDIWLRD 428
[Close]
BLAST of rna helicase vs. nr
Match: gi|218324808|emb|CAV26511.1| (putative ATP-dependent RNA helicase [Vibrio tasmaniensis LGP32])

HSP 1 Score: 723.776 bits (1867), Expect = 0.000e+0
Identity = 368/436 (84.40%), Postives = 376/436 (86.24%), Query Frame = 0 
Query:    1 LQLMTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 436
            LQLMTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGN+VSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP        ++ D + S A+                                               KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQH+WRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGR+GEVGLALSLIDHEDYHHF IIEKKNKIRL+
Sbjct:   38 LQLMTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNYVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP-------GRLLDLISSNAI-----------------------------------------------KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRSGEVGLALSLIDHEDYHHFTIIEKKNKIRLE 419

HSP 2 Score: 601.668 bits (1550), Expect = 0.000e+0
Identity = 294/299 (98.33%), Postives = 297/299 (99.33%), Query Frame = 0 
Query:  434 RLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN 732
            ++  LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGR+GEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN
Sbjct:  170 QMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRSGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN 468
[Close]
BLAST of rna helicase vs. nr
Match: gi|1041564731|ref|WP_065206091.1| (ATP-dependent helicase [Vibrio splendidus] >gi|1040457879|gb|OBT30849.1| RNA helicase [Vibrio splendidus])

HSP 1 Score: 723.391 bits (1866), Expect = 0.000e+0
Identity = 368/433 (84.99%), Postives = 374/433 (86.37%), Query Frame = 0 
Query:    4 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 436
            MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP        ++ D + S A+                                               KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQH+WRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRL+
Sbjct:    1 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP-------GRLLDLISSNAI-----------------------------------------------KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLE 379

HSP 2 Score: 598.201 bits (1541), Expect = 0.000e+0
Identity = 293/299 (97.99%), Postives = 295/299 (98.66%), Query Frame = 0 
Query:  434 RLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN 732
            ++  LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHF IIEKKNKIRLEREQIEGFEVDEEATA LVAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN
Sbjct:  130 QMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLEREQIEGFEVDEEATAELVAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN 428
[Close]
BLAST of rna helicase vs. nr
Match: gi|937082233|ref|WP_054546896.1| (ATP-dependent helicase [Vibrio splendidus] >gi|934143720|gb|KPL94683.1| RNA helicase [Vibrio splendidus])

HSP 1 Score: 723.391 bits (1866), Expect = 0.000e+0
Identity = 367/433 (84.76%), Postives = 374/433 (86.37%), Query Frame = 0 
Query:    4 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 436
            MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRR+GKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVC+FGGVSVNTQMQALRGGTDILVATP        ++ D + S A+                                               KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRL+
Sbjct:    1 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRAGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCIFGGVSVNTQMQALRGGTDILVATP-------GRLLDLISSNAI-----------------------------------------------KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLE 379

HSP 2 Score: 597.045 bits (1538), Expect = 0.000e+0
Identity = 292/299 (97.66%), Postives = 295/299 (98.66%), Query Frame = 0 
Query:  434 RLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN 732
            ++  LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQH+WRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHF IIEKKNKIRLEREQIEGFEVDEEATA LVAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN
Sbjct:  130 QMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLEREQIEGFEVDEEATAELVAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN 428
[Close]
BLAST of rna helicase vs. nr
Match: gi|1330682113|ref|WP_102551366.1| (ATP-dependent helicase [Vibrio splendidus] >gi|1327095173|gb|PMM62595.1| RNA helicase [Vibrio splendidus])

HSP 1 Score: 722.235 bits (1863), Expect = 0.000e+0
Identity = 368/433 (84.99%), Postives = 373/433 (86.14%), Query Frame = 0 
Query:    4 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 436
            MTNTTTPTNFSDLGLISPL ARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGN+VSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP        ++ D + S A+                                               KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD
Sbjct:    1 MTNTTTPTNFSDLGLISPLTARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNYVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP-------GRLLDLISSNAI-----------------------------------------------KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 379

HSP 2 Score: 575.089 bits (1481), Expect = 0.000e+0
Identity = 283/299 (94.65%), Postives = 290/299 (96.99%), Query Frame = 0 
Query:  434 RLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTGKKKK-KKAPKNQDVWLRN 731
            ++  LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQH+WRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHF IIEKKNKIRL+REQ+EGFEVDEEATA LVAALKPVAPP GTGKKKK KKA  N D+WLR+
Sbjct:  130 QMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLDREQVEGFEVDEEATAELVAALKPVAPPEGTGKKKKNKKAQTNHDIWLRD 428
[Close]
BLAST of rna helicase vs. nr
Match: gi|1330711260|ref|WP_102576225.1| (ATP-dependent helicase [Vibrio splendidus] >gi|1326861923|gb|PMK37173.1| RNA helicase [Vibrio splendidus])

HSP 1 Score: 722.235 bits (1863), Expect = 0.000e+0
Identity = 368/433 (84.99%), Postives = 373/433 (86.14%), Query Frame = 0 
Query:    4 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 436
            MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGN+VSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP        ++ D + S A+                                               KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRS SDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD
Sbjct:    1 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNYVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP-------GRLLDLISSNAI-----------------------------------------------KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSSSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 379

HSP 2 Score: 572.392 bits (1474), Expect = 0.000e+0
Identity = 282/299 (94.31%), Postives = 289/299 (96.66%), Query Frame = 0 
Query:  434 RLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTGKKKK-KKAPKNQDVWLRN 731
            ++  LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQH+WRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRS SDYMHRIGRSGRAGEVGLALSLIDHEDYHHF IIEKKNKIRL+REQ+EGFEVDEEATA LVAALKPVAPP GTGKKKK KKA  N D+WLR+
Sbjct:  130 QMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSSSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLDREQVEGFEVDEEATAELVAALKPVAPPEGTGKKKKNKKAQTNHDIWLRD 428
[Close]
BLAST of rna helicase vs. nr
Match: gi|1197840948|ref|WP_086773860.1| (ATP-dependent helicase [Vibrio sp. corallo1])

HSP 1 Score: 722.235 bits (1863), Expect = 0.000e+0
Identity = 367/433 (84.76%), Postives = 374/433 (86.37%), Query Frame = 0 
Query:    4 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 436
            MTNTTTPTNFSDLGLISPLMARL+ELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQ+IHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP        ++ D + S A+                                               KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQH+WRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD
Sbjct:    1 MTNTTTPTNFSDLGLISPLMARLSELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQKIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP-------GRLLDLISSNAI-----------------------------------------------KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 379

HSP 2 Score: 592.423 bits (1526), Expect = 0.000e+0
Identity = 289/299 (96.66%), Postives = 294/299 (98.33%), Query Frame = 0 
Query:  434 RLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN 732
            ++  LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHF IIEKKNKIRL+REQIEGFEVDEEATA L+AALKPVAPPAGTGKKKKKKAP+NQDVWL NN
Sbjct:  130 QMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLDREQIEGFEVDEEATAELIAALKPVAPPAGTGKKKKKKAPQNQDVWLNNN 428
[Close]
BLAST of rna helicase vs. nr
Match: gi|1196329213|ref|WP_086050984.1| (ATP-dependent helicase [Vibrio alginolyticus] >gi|1190171324|gb|ARP40412.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus])

HSP 1 Score: 722.235 bits (1863), Expect = 0.000e+0
Identity = 367/433 (84.76%), Postives = 373/433 (86.14%), Query Frame = 0 
Query:    4 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 436
            MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP        ++ D + S A+                                               KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQH+WRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHF IIEKKNKIRL+
Sbjct:    1 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP-------GRLLDLISSKAI-----------------------------------------------KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLE 379

HSP 2 Score: 593.193 bits (1528), Expect = 0.000e+0
Identity = 291/299 (97.32%), Postives = 293/299 (97.99%), Query Frame = 0 
Query:  434 RLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTGKKKKKKAPKNQDVWLRNN 732
            ++  LRGGTDILVATPGRLLDLISS AIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATA LVAALKPVAPPAGTGKKKKKKA  NQDVWLRNN
Sbjct:  130 QMQALRGGTDILVATPGRLLDLISSKAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAELVAALKPVAPPAGTGKKKKKKAQTNQDVWLRNN 428
[Close]
BLAST of rna helicase vs. nr
Match: gi|914629045|ref|WP_050620773.1| (ATP-dependent helicase [Vibrio sp. J2-3] >gi|857692404|emb|CDT79554.1| putative ATP-dependent RNA helicase [Vibrio sp. J2-3])

HSP 1 Score: 722.235 bits (1863), Expect = 0.000e+0
Identity = 367/433 (84.76%), Postives = 374/433 (86.37%), Query Frame = 0 
Query:    4 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 436
            MTNTTTPTNFSDLGLISPLMARL+ELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQ+IHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP        ++ D + S A+                                               KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQH+WRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD
Sbjct:    1 MTNTTTPTNFSDLGLISPLMARLSELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQKIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP-------GRLLDLISSNAI-----------------------------------------------KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 379

HSP 2 Score: 588.186 bits (1515), Expect = 0.000e+0
Identity = 289/300 (96.33%), Postives = 294/300 (98.00%), Query Frame = 0 
Query:  434 RLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTG-KKKKKKAPKNQDVWLRNN 732
            ++  LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHF IIEKKNKIRL+REQIEGFEVDEEATA L+AALKPVAPPAGTG KKKKKKAP+NQDVWL NN
Sbjct:  130 QMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLDREQIEGFEVDEEATAELIAALKPVAPPAGTGKKKKKKKAPQNQDVWLNNN 429
[Close]
BLAST of rna helicase vs. nr
Match: gi|515648520|ref|WP_017081120.1| (ATP-dependent helicase [Vibrio splendidus] >gi|1067450501|gb|OEF20749.1| RNA helicase [Vibrio splendidus 5S-101])

HSP 1 Score: 722.235 bits (1863), Expect = 0.000e+0
Identity = 367/433 (84.76%), Postives = 374/433 (86.37%), Query Frame = 0 
Query:    4 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRSGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHQWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLD 436
            MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRR+GKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP        ++ D + S A+                                               KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQH+WRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRL+
Sbjct:    1 MTNTTTPTNFSDLGLISPLMARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPLLQQIHEDAPLDRRAGKGNFVSGLILVPTRELAKQVADSVKSYAVHFNGAIKTVCVFGGVSVNTQMQALRGGTDILVATP-------GRLLDLISSNAI-----------------------------------------------KLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLE 379

HSP 2 Score: 590.497 bits (1521), Expect = 0.000e+0
Identity = 291/300 (97.00%), Postives = 294/300 (98.00%), Query Frame = 0 
Query:  434 RLDPLRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFTIIEKKNKIRLEREQIEGFEVDEEATAALVAALKPVAPPAGTG-KKKKKKAPKNQDVWLRNN 732
            ++  LRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHF IIEKKNKIRLEREQIEGFEVDEEATA L+AALKPVAPPAGTG KKKKKKAPKNQDVWL NN
Sbjct:  130 QMQALRGGTDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELDAILKLLPSKKQTLLFSATFPEQVKTLTHELLNDPIEVQLQSANASTLVQRVFEVEKGRKTALLAHLIQQHEWRQALIFVNAKNSCEHLADKLYKRGIIAEVFHGDKGQGSRTRILEDFKSGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHEDYHHFKIIEKKNKIRLEREQIEGFEVDEEATAELIAALKPVAPPAGTGKKKKKKKAPKNQDVWLNNN 429
The following BLAST results are available for this feature:
BLAST of rna helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000101436.826e-6234.48supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1... [more]
EMLSAG000000049184.481e-6136.80supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989... [more]
EMLSAG000000113909.991e-6032.93supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1... [more]
EMLSAG000000003953.509e-5733.12supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:... [more]
EMLSAG000000080483.458e-5532.44supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1... [more]
EMLSAG000000114526.113e-5534.99supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1... [more]
EMLSAG000000025811.195e-5437.68supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803... [more]
EMLSAG000000002492.384e-5429.17supercontig:LSalAtl2s:LSalAtl2s1036:82728:88820:1 ... [more]
EMLSAG000000051101.923e-5338.25supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1... [more]
EMLSAG000000071416.082e-5328.44supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1... [more]

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BLAST of rna helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|548730|sp|P25888.3|RHLE_ECOLI5.081e-9641.81RecName: Full=ATP-dependent RNA helicase RhlE[more]
gi|32171494|sp|Q8XA87.3|DEAD_ECO574.828e-7836.07RecName: Full=ATP-dependent RNA helicase DeaD; Alt... [more]
gi|71154182|sp|P0A9P7.2|DEAD_ECOL65.637e-7836.07RecName: Full=ATP-dependent RNA helicase DeaD; Alt... [more]
gi|8928554|sp|P33906.3|DEAD_KLEPN1.187e-7736.07RecName: Full=ATP-dependent RNA helicase DeaD; Alt... [more]
gi|134039178|sp|P96614.2|CSHA_BACSU1.839e-7232.64RecName: Full=DEAD-box ATP-dependent RNA helicase ... [more]
gi|81675946|sp|Q5L3G9.1|CSHA_GEOKA1.383e-7132.64RecName: Full=DEAD-box ATP-dependent RNA helicase ... [more]
gi|75535255|sp|Q9Z6C9.1|CSHA_LACRE6.413e-7133.33RecName: Full=ATP-dependent RNA helicase CshA; Alt... [more]
gi|143456452|sp|Q0DB53.2|RH52A_ORYSJ5.185e-7035.29RecName: Full=DEAD-box ATP-dependent RNA helicase ... [more]
gi|74660335|sp|Q6CLR3.1|DED1_KLULA1.220e-6937.56RecName: Full=ATP-dependent RNA helicase DED1[more]
gi|122206897|sp|Q2R1M8.1|RH52C_ORYSJ2.540e-6934.99RecName: Full=DEAD-box ATP-dependent RNA helicase ... [more]

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BLAST of rna helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|656279300|ref|WP_029224953.1|0.000e+085.22ATP-dependent helicase [Vibrio splendidus] >gi|106... [more]
gi|218324808|emb|CAV26511.1|0.000e+084.40putative ATP-dependent RNA helicase [Vibrio tasman... [more]
gi|1041564731|ref|WP_065206091.1|0.000e+084.99ATP-dependent helicase [Vibrio splendidus] >gi|104... [more]
gi|937082233|ref|WP_054546896.1|0.000e+084.76ATP-dependent helicase [Vibrio splendidus] >gi|934... [more]
gi|1330682113|ref|WP_102551366.1|0.000e+084.99ATP-dependent helicase [Vibrio splendidus] >gi|132... [more]
gi|1330711260|ref|WP_102576225.1|0.000e+084.99ATP-dependent helicase [Vibrio splendidus] >gi|132... [more]
gi|1197840948|ref|WP_086773860.1|0.000e+084.76ATP-dependent helicase [Vibrio sp. corallo1][more]
gi|1196329213|ref|WP_086050984.1|0.000e+084.76ATP-dependent helicase [Vibrio alginolyticus] >gi|... [more]
gi|914629045|ref|WP_050620773.1|0.000e+084.76ATP-dependent helicase [Vibrio sp. J2-3] >gi|85769... [more]
gi|515648520|ref|WP_017081120.1|0.000e+084.76ATP-dependent helicase [Vibrio splendidus] >gi|106... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold554_size137761supercontigscaffold554_size137761:74928..77387 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold554_size137761-snap-gene-0.2-mRNA-1maker-scaffold554_size137761-snap-gene-0.2-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold554_size137761:74928..77387+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold554_size137761-snap-gene-0.2 ID=maker-scaffold554_size137761-snap-gene-0.2|Name=rna helicase|organism=Tigriopus kingsejongensis|type=gene|length=2460bp|location=Sequence derived from alignment at scaffold554_size137761:74928..77387+ (Tigriopus kingsejongensis)
CTTTGAGTTCCTGCAATTAATGACTAACACCACAACACCAACCAACTTCT
CTGATCTTGGCTTAATCTCTCCTTTGATGGCTCGCTTAACAGAGCTTGAA
TACCAACAGCCAACGCCTATCCAAGCGCAAGTTATTCCAAGTGTGTTAGC
AGGACGCGACCTAATTGCAGGTGCAAATACGGGTTCAGGTAAAACCGCAG
CATTTGCACTTCCACTGTTACAGCAGATCCATGAAGATGCACCTTTAGAC
CGTCGTTCGGGTAAAGGTAACTTTGTGTCTGGTCTTATCTTAGTTCCTAC
TCGTGAGCTTGCTAAGCAAGTGGCTGACAGCGTTAAGTCTTACGCAGTAC
ACTTCAATGGTGCGATCAAAACGGTTTGTGTATTTGGTGGTGTATCGGTA
AACACTCAGATGCAAGCGCTACGTGGCGGCACTGATATCTTGGTGGCAAC
ACCGGGTCGTTTGCTGGATCTTATCTCAAGCAACGCAATCAAACTTGATA
AAGTTAAAACGCTNNNNNNNNNNNNNNGTGCTTTTTGACAAAAACCTGAT
TTTGGGTAACAAAATAGGCCACAGGGCTATTCCCAAAATGAATTGGTGAT
ATTCTAAAATTGGTAACTTTGTGTCTGGTCTTATCTTAGTTCCTACTCGT
GAGCTTGCTAAGCAAGTGGCTGACAGCGTTAAGTCTTACGCAGTACACTT
CAATGGTGCGATCAAAACGGTTTGTGTATTTGGTGGTGTATCGGTAAACA
CTCAGATGCAAGCGCTACGTGGCGGCACTGATATCTTGGTGGCAACACCG
GGTCGTTTGCTGGATCTTATCTCAAGCAACGCAATCAAACTTGATAAAGT
TAAAACGCTAGTGCTTGATGAAGCGGACCGCATGTTGAGCCTTGGCTTTA
CAGAAGAACTAGACGCGATCTTGAAACTTCTTCCTAGCAAAAAGCAAACC
TTGTTGTTCTCTGCGACTTTCCCAGAGCAAGTTAAAACATTAACTCACGA
ATTACTGAACGACCCGATTGAAGTTCAACTTCAAAGTGCAAACGCGAGCA
CATTGGTGCAGCGTGTATTCGAAGTCGAGAAAGGACGCAAGACAGCTCTG
CTAGCACACCTGATTCAACAACACCAATGGCGACAAGCTCTGATCTTCGT
TAATGCGAAAAACAGCTGTGAGCACTTGGCAGACAAGCTTTATAAGCGCG
GTATCATCGCAGAAGTATTCCACGGTGATAAAGGGCAGGGTTCACGTACT
CGTATCCTTGAAGATTTCAAATCTGGCGAGATTGACGTTCTAATCGCGAC
AGACATCGCTGCTCGTGGCTTGGACATTGAAAAACTTCCAGTTGTAATCA
ACTTTGATTTACCAAGAAGCCCATCGGATTACATGCACCGTATCGGTCGA
AGTGGCCGTGCAGGTGAGGTTGGCCTTGCGTTGTCATTGATCGATCACGA
AGATTACCATCACTTCAAGATCATCGAGAAGAAGAACAAAATCCGTCTTG
ACCGTTATCTTGCTTCAATACATTTTTATAATGCCGATGATGACGGAGCT
NTCGGTAAACACTCAGATGCAAGCGCTACGTGGCGGCACTGATATCTTGG
TGGCAACACCGGGTCGTTTGCTGGATCTTATCTCAAGCAACGCAATCAAA
CTTGATAAAGTTAAAACGCTAGTGCTTGATGAAGCGGACCGCATGTTGAG
CCTTGGCTTTACAGAAGAACTAGACGCGATCTTGAAACTTCTCCCTAGCA
AAAAGCAAACCTTGCTGTTCTCTGCGACTTTCCCAGAGCAAGTTAAAACA
TTAACTCACGAATTACTGAACGACCCGATTGAAGTTCAACTTCAAAGTGC
AAACGCGAGCACGCTAGTTCAGCGTGTATTCGAAGTAGAAAAAGGTCGTA
AGACCGCATTGCTAGCGCACCTGATTCAACAACACGAATGGCGACAAGCT
CTGATCTTCGTGAATGCGAAGAACAGCTGTGAGCACTTGGCAGACAAGCT
TTACAAGCGCGGTATTATCGCGGAAGTATTCCACGGTGATAAAGGGCAGG
GTTCACGTACTCGCATCCTTGAAGATTTCAAATCTGGTGAGATCGACGTT
CTTATCGCGACAGACATCGCGGCACGTGGTCTGGATATCGAAAAGCTACC
AGTAGTAATCAACTTTGACCTACCACGTAGCCCATCAGACTACATGCATC
GTATTGGCCGAAGTGGTCGTGCGGGTGAGGTTGGTCTAGCGCTATCTTTG
ATCGACCACGAAGATTACCATCACTTCACAATCATTGAGAAGAAGAACAA
AATCCGTCTTGAGCGTGAGCAAATTGAAGGTTTTGAAGTGGATGAAGAGG
CAACCGCTGCACTTGTTGCTGCATTAAAACCCGTTGCGCCACCGGCTGGT
ACAGGCAAGAAGAAAAAGAAGAAAGCACCTAAAAACCAAGATGTTTGGTT
GAGAAACAAC
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Synonyms
The feature 'rna helicase' has the following synonyms
Synonym
Tk04067
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