cuticle protein 6, maker-scaffold57_size444674-snap-gene-0.19 (gene) Tigriopus kingsejongensis

Overview


Name	cuticle protein 6
Unique Name	maker-scaffold57_size444674-snap-gene-0.19
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000012778 (supercontig:LSalAtl2s:LSalAtl2s96:46461:47672:-1 gene:EMLSAG00000012778 transcript:EMLSAT00000012778 description:"maker-LSalAtl2s96-augustus-gene-0.9")

HSP 1 Score: 99.7525 bits (247), Expect = 8.192e-24
Identity = 61/130 (46.92%), Postives = 79/130 (60.77%), Query Frame = 0

Query:  136 RRPLVGVPAVPAPHFRAAAPFAHAAPIAHAVPVAHPVPVVNAAPVPIAAPALVPLPTPEHPE-ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNI 264
            ++  +G PA P+      AP A+A P+A A            AP PIA+     +P    P  ASSQ+H+QDE+ NY YGY NINS K E GNA + V+GSYSY+D YG  Q V+YVAD +GFR +GTN+
Sbjct:  261 KKRSIGYPAYPS-----YAPHAYA-PVARAY-----------APHPIAS-----IPAYHAPAVASSQYHSQDEYDNYNYGYQNINSQKSESGNARDAVKGSYSYIDSYGKSQTVNYVADGYGFRASGTNL 368

HSP 2 Score: 96.6709 bits (239), Expect = 8.684e-23
Identity = 58/130 (44.62%), Postives = 76/130 (58.46%), Query Frame = 0

Query:  198 ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPATHG--RKKRQVGAFGYASPFPAPLTGAAYAGLPIGPAHLPVPAGPVAYASPVVSAPAV 325
            ASSQ+  QDE+ N+ +GY+N NS ++E GN + GV GSYSYVD YG P  V+YVADD GFR  GT++  S       RKKR +G       +PA  + A +A  P+  A+ P P   +    P   APAV
Sbjct:  183 ASSQYRTQDEYDNFSFGYANENSQRQESGNGYGGVSGSYSYVDXYGKPHTVNYVADDLGFRATGTDLVNSAYADKAYRKKRSIG-------YPAYPSYAPHAYAPVARAYAPHPIASI----PAYHAPAV 301

HSP 3 Score: 94.3597 bits (233), Expect = 5.751e-22
Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 0

Query:  187 LVPLPTPEHPEASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNI 264
            + P   P  P  SSQ H+QDE+GN+ YGY N+NS K E GNA+  V+G YSY+D YG  Q V YVADD+GFR +GTN+
Sbjct:   34 VAPYYAPYTP--SSQHHSQDEYGNFAYGYENVNSQKSESGNAYGAVKGQYSYIDAYGKSQTVDYVADDYGFRASGTNL 109

[Close]

BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011034 (supercontig:LSalAtl2s:LSalAtl2s743:38931:72657:1 gene:EMLSAG00000011034 transcript:EMLSAT00000011034 description:"maker-LSalAtl2s743-augustus-gene-0.7")

HSP 1 Score: 98.9821 bits (245), Expect = 5.863e-23
Identity = 52/96 (54.17%), Postives = 61/96 (63.54%), Query Frame = 0

Query:  173 PVVNAAPVPIAAPALVPLPTPEHPEASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSP 268
            P+V   PVP  AP  +         A SQFHAQDEFGN ++GYSNINSAK E GN + GV G Y YVD  GV Q VSYVAD  GFR   + +P++P
Sbjct:   64 PLVPHYPVPHVAPHALHYAAGXGXPAXSQFHAQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPIAP 159

HSP 2 Score: 97.4413 bits (241), Expect = 2.056e-22
Identity = 46/73 (63.01%), Postives = 53/73 (72.60%), Query Frame = 0

Query:  198 ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPAT 270
            ASSQFH+QDEFGN ++GYSNINSAK E GN + G  G Y YVD  GV Q VSYVAD  GFR   + +PV+PA 
Sbjct:  399 ASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGDAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAV 471

[Close]

BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011035 (supercontig:LSalAtl2s:LSalAtl2s743:76924:89115:-1 gene:EMLSAG00000011035 transcript:EMLSAT00000011035 description:"maker-LSalAtl2s743-snap-gene-1.15")

HSP 1 Score: 96.6709 bits (239), Expect = 1.571e-22
Identity = 44/71 (61.97%), Postives = 53/71 (74.65%), Query Frame = 0

Query:  198 ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSP 268
            ASSQFH+QDEFGN ++GYSNINSAK E GN + GV G Y YVD  GV Q VSY+AD  GFR   + +P++P
Sbjct:  285 ASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQTVSYIADGLGFRTVDSRLPIAP 355

HSP 2 Score: 91.2781 bits (225), Expect = 1.161e-20
Identity = 50/98 (51.02%), Postives = 58/98 (59.18%), Query Frame = 0

Query:  198 ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRV----------AGTNIPVSPATHGRKKRQVGAFGYAS 285
            ASSQFH+QDEFGN ++GYSNINSAK E GN + GV G Y YVD  GV Q VSYVAD  GFR            G  IP +P     K+    A+  A+
Sbjct:   96 ASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQTVSYVADGLGFRTPLVQPEAPVFEGEQIPDTPEVAAAKEEFQKAYDAAT 193

[Close]

BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000002943 (supercontig:LSalAtl2s:LSalAtl2s168:685699:687161:1 gene:EMLSAG00000002943 transcript:EMLSAT00000002943 description:"augustus_masked-LSalAtl2s168-processed-gene-6.0")

HSP 1 Score: 82.4185 bits (202), Expect = 6.886e-19
Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 0

Query:  166 VPVAHPVPVVNAAPVPIAAPALVPL--------PTPEHPEASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTN--------IPVSPATHGRKKRQVGAFGY 283
            +P  +P PV   AP+P  AP   P+        P  ++  A+ QFH+Q+EFGN  +GYSN NSA  E  + +  V GSYSYVD  G+ + VSYVADD GFR+  TN        +  + A H    +Q G + Y
Sbjct:   72 IPEQNPQPVY--APIPEQAPIHEPVAHAVVSNAPASQYVXAT-QFHSQNEFGNANFGYSNENSALEESRDEYGNVVGSYSYVDATGINRHVSYVADDGGFRITSTNNLPEDTPEVAAAKALHFDALKQRGLYLY 202

[Close]

BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011961 (supercontig:LSalAtl2s:LSalAtl2s84:1186001:1208377:1 gene:EMLSAG00000011961 transcript:EMLSAT00000011961 description:"maker-LSalAtl2s84-snap-gene-12.12")

HSP 1 Score: 70.4774 bits (171), Expect = 1.414e-13
Identity = 69/219 (31.51%), Postives = 102/219 (46.58%), Query Frame = 0

Query:  142 VPAVPAPHFRA---AAPFAHAAPIAHAVPVAHPVPVVNAAPV----PIAAPALVPLPTPEHPEASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRV-----AGTNIPVSPATHGRKKRQVGAFGYASP--FPAPLTGAAYAGLPIGPAHLPVPAGPVAYASPVVSAPAVRKAILTTVQLNPGHAVSYRVD 346
            V  +P P F +   AAP +  AP+      ++P+ +    P+    PI  PA+ P+     P ++ QFHAQ+EFG Y+YG+SN  ++K E       V GSYSY+D  G  Q  +Y++D  GFR+     +    P     + R   Q     YA    +  P        +P  PA++P    P +YA P      V  +I + V LN  H VS + D
Sbjct:  433 VEKIPEPIFVSSPIAAPESSFAPVEGPAYASNPIELPINGPLLVEDPIILPAVKPVEPLVSPISTFQFHAQNEFGEYKYGFSNPTASKNE-IKVDGIVRGSYSYIDANGEFQITNYISDALGFRLFQSPSSSKRCPSRXEANMRSLVQHTYLPYAVNYGYQNPSRALPLPEVPDSPAYVP---PPYSYADPTGKVKNV-PSISSIVHLN-SHDVSSKED 645

HSP 2 Score: 65.855 bits (159), Expect = 4.902e-12
Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0

Query:  200 SQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPA 269
            S FH+QD+ G Y +GY +   +K E   A   V G Y Y+D  G+ Q V Y++DD GFRV  +N+P+ P 
Sbjct:   44 SIFHSQDDQGGYNFGYESDRESKTEVKTADGVVRGKYKYIDANGILQTVYYISDDKGFRVXXSNLPIXPE 113

HSP 3 Score: 61.6178 bits (148), Expect = 1.163e-10
Identity = 48/142 (33.80%), Postives = 65/142 (45.77%), Query Frame = 0

Query:  143 PAVPAPHFRAAAP-------FAHAAPIAHAV-PVAHPVPVVNAAPVPIAAPALVPLPTPEHPEASSQ----------FHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPV 266
            P  P PH ++  P       F +  P    + PV  P P   + P+    P +  +P    P  + +          FH +D+ G+Y +GY + +S KR        V GSY Y+D  G  Q V YVAD  GFRV GTNIPV
Sbjct:  195 PYTPIPHSKSYTPRILNPYAFYNNNPTTKPIYPVNTPYP---SNPLLSRNPEVEQVPQSSSPPQNEKTPSPLLDRKNFHVKDKDGHYAFGYEDQHS-KRTEARYEGTVRGSYDYIDADGNVQTVHYVADKEGFRVKGTNIPV 332

[Close]

BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011036 (supercontig:LSalAtl2s:LSalAtl2s743:94413:95794:1 gene:EMLSAG00000011036 transcript:EMLSAT00000011036 description:"maker-LSalAtl2s743-augustus-gene-1.11")

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-13
Identity = 30/44 (68.18%), Postives = 36/44 (81.82%), Query Frame = 0

Query:  198 ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDG 241
            ASSQFH+QDE GN ++GYSNINSAK E+GN ++GV G Y YVD 
Sbjct:  199 ASSQFHSQDELGNLQFGYSNINSAKYEQGNTYSGVNGGYQYVDA 242

[Close]

BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000005067 (supercontig:LSalAtl2s:LSalAtl2s266:430378:430665:-1 gene:EMLSAG00000005067 transcript:EMLSAT00000005067 description:"augustus_masked-LSalAtl2s266-processed-gene-3.1")

HSP 1 Score: 53.9138 bits (128), Expect = 1.135e-9
Identity = 26/45 (57.78%), Postives = 29/45 (64.44%), Query Frame = 0

Query:  226 GNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPAT 270
            GN + GV G Y YVD  GV Q VSYVAD FGFR   +  PV+PA 
Sbjct:    4 GNTYGGVAGGYQYVDANGVLQSVSYVADGFGFRTVDSRFPVAPAV 48

[Close]

BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000006400 (supercontig:LSalAtl2s:LSalAtl2s350:527593:528306:1 gene:EMLSAG00000006400 transcript:EMLSAT00000006400 description:"maker-LSalAtl2s350-augustus-gene-5.15")

HSP 1 Score: 51.9878 bits (123), Expect = 2.124e-8
Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 0

Query:  210 NYEYGYSNIN-----SAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTN 263
            NY +G+S I+     S +R     +N V G+YSY DGY + Q V YVAD+FGFRV   N
Sbjct:   63 NYNFGFSIIDGINDASIERTETRENNKVTGAYSYTDGY-IKQTVVYVADEFGFRVIDXN 120

[Close]

BLAST of cuticle protein 6 vs. SwissProt
Match: gi|48427979|sp|P82119.1|CUO6_BLACR (RecName: Full=Cuticle protein 6; AltName: Full=BcNCP14.9)

HSP 1 Score: 52.7582 bits (125), Expect = 1.877e-7
Identity = 29/74 (39.19%), Postives = 41/74 (55.41%), Query Frame = 0

Query:  197 EASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAG-TNIPVSPA 269
            + S+Q+HAQD  G + + ++  N  + E  +    V G Y YVD  G    V YVAD  GFRV G  N+P +P+
Sbjct:   20 QVSTQYHAQDILGQFAFHHAGDNQVRTETKSFDGSVRGLYGYVDPTGKLVNVHYVADSNGFRVVGANNLPEAPS 93

[Close]

BLAST of cuticle protein 6 vs. nr
Match: gi|1325277591|ref|XP_023323434.1| (cuticle protein 7-like [Eurytemora affinis])

HSP 1 Score: 104.76 bits (260), Expect = 1.557e-22
Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 0

Query:  199 SSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPATHG 272
            +SQFHAQDEFGN  YGYSNINSAK+E GN + GV GSYSYVD  G  QQV+YVAD  GFRVA + +PV+P   G
Sbjct:   74 NSQFHAQDEFGNLNYGYSNINSAKQEIGNTYGGVSGSYSYVDPNGELQQVNYVADALGFRVADSRLPVAPVDTG 147

[Close]

BLAST of cuticle protein 6 vs. nr
Match: gi|1325262447|ref|XP_023332447.1| (uncharacterized protein LOC111704439 [Eurytemora affinis])

HSP 1 Score: 103.605 bits (257), Expect = 7.238e-22
Identity = 88/195 (45.13%), Postives = 108/195 (55.38%), Query Frame = 0

Query:  153 AAPFAHAAPIAHAVPVAHPVPVVNAAPVPIAAPALVPLPTPEHPEASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAG-TNIPVSPATHGRKKRQVGAFGYASPFPAPLTGAAYAGLPIGPAHLPVPAGPVAYASPVVSAPAVRKAILTTVQLNPGHAVSYRVD 346
            A+P+A    + + VP A+P P+   +    AAPA VP  T      S+QF + DE+GN  +GYSNINSA++E+GN   GV GSYSYVD  G    VSY+AD  G+RV G TN+PV PA     KR VG   YA P       A YAG                       APA R+A+LTT+QLNPGHA  YRVD
Sbjct:  133 ASPYA----LNYGVP-AYPAPLT-VSTYQAAAPA-VPSVT------STQFRSGDEYGNNAFGYSNINSARQEQGN-DAGVTGSYSYVDEAG-SHTVSYIADALGYRVTGATNLPV-PARGYLHKRSVG--DYAVPI------ATYAG---------------------AEAPA-REAVLTTIQLNPGHATFYRVD 281

HSP 2 Score: 90.1225 bits (222), Expect = 4.573e-17
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 0

Query:  199 SSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAG-TNIPVSPATHGRKKRQVG------AFGYASP-FPAPLTGAAY 296
            SSQ+ + DE+GN  +GYSNINSA++E+GN   GV GSYSYVD  G    VSY+AD  G+RV G +N+P++ A +GR +R +G      A  Y  P +PAPLT + Y
Sbjct:   51 SSQYRSGDEYGNNAFGYSNINSARQEQGN-DAGVTGSYSYVDEAG-SHTVSYIADALGYRVTGHSNLPIAAAGYGRHRRSIGYGASPYALNYGVPAYPAPLTVSTY 154

[Close]

BLAST of cuticle protein 6 vs. nr
Match: gi|155966257|gb|ABU41082.1| (putative cuticle protein [Lepeophtheirus salmonis])

HSP 1 Score: 98.9821 bits (245), Expect = 9.424e-22
Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 0

Query:  198 ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPAT 270
            ASSQFH+QDEFGN ++GYSNINSAK E GN + GV G Y YVD  GV Q VSYVAD  GFR   + +PV+PA 
Sbjct:   13 ASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAV 85

[Close]

BLAST of cuticle protein 6 vs. nr
Match: gi|290462935|gb|ADD24515.1| (Cuticle protein 6 [Lepeophtheirus salmonis])

HSP 1 Score: 103.99 bits (258), Expect = 2.179e-21
Identity = 73/190 (38.42%), Postives = 102/190 (53.68%), Query Frame = 0

Query:  151 RAAAPFAHAAPIAHAVPVAHPVPVVN-AAPVPIA--APALV----------PLPTPEHPEASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPATHG--RKKRQVGAFGYASPFPAPLTGAAYAGLPIGPAHLPVPAGPVAYASPVVSAPAV 325
            + +A + +A  +A++V   HP  + + AAP P+A   PA +          P P      ASSQ+  QDE+ N+ +GY+N NS ++E GN + GV GSYSYVD YG P  V+YVADD GFR  GT++  S       RKKR +G       +PA  + A +A  P+  A+ P P   +    P   APAV
Sbjct:  123 KRSAIYPYAPTLAYSVVATHPTALYHHAAPAPVAHHGPAAIHASPVAAQHGPAPAAHTAIASSQYRTQDEYDNFSFGYANENSQRQESGNGYGGVSGSYSYVDAYGKPHTVNYVADDLGFRATGTDLVNSAYADKAYRKKRSIG-------YPAYPSYAPHAYAPVARAYAPHPIASI----PAYHAPAV 301

HSP 2 Score: 98.2117 bits (243), Expect = 2.913e-19
Identity = 61/130 (46.92%), Postives = 79/130 (60.77%), Query Frame = 0

Query:  136 RRPLVGVPAVPAPHFRAAAPFAHAAPIAHAVPVAHPVPVVNAAPVPIAAPALVPLPTPEHPE-ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNI 264
            ++  +G PA P+      AP A+A P+A A            AP PIA+     +P    P  ASSQ+H+QDE+ NY YGY NINS K E GNA + V+GSYSY+D YG  Q V+YVAD +GFR +GTN+
Sbjct:  261 KKRSIGYPAYPS-----YAPHAYA-PVARAY-----------APHPIAS-----IPAYHAPAVASSQYHSQDEYDNYNYGYQNINSQKSESGNARDVVKGSYSYIDSYGKSQTVNYVADGYGFRASGTNL 368

HSP 3 Score: 95.9005 bits (237), Expect = 1.433e-18
Identity = 68/159 (42.77%), Postives = 85/159 (53.46%), Query Frame = 0

Query:  187 LVPLPTPEHPEASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPA---THGRKKRQVGAFGYASPFPAPLTGAAYAGLPIGPAHLPVPA-----GPVA-YASPVVS----APAVRKAILTT 332
            + P   P  P  SSQ H+QDE+GN+ YGY N+NS K E GNA+  V+G YSY+D YG  Q V YVADD+GFR +GTN+  S     T  R KR         P+   L  +  A  P    H   PA     GP A +ASPV +    APA   AI ++
Sbjct:   34 VAPYYAPYTP--SSQHHSQDEYGNFAYGYENVNSQKSESGNAYGAVKGQYSYIDAYGKSQTVDYVADDYGFRASGTNLVNSADALNTGYRHKRSA-----IYPYAPTLAYSVVATHPTALYHHAAPAPVAHHGPAAIHASPVAAQHGPAPAAHTAIASS 185

[Close]

BLAST of cuticle protein 6 vs. nr
Match: gi|225712386|gb|ACO12039.1| (Cuticle protein 6 [Lepeophtheirus salmonis])

HSP 1 Score: 100.908 bits (250), Expect = 3.950e-21
Identity = 59/113 (52.21%), Postives = 66/113 (58.41%), Query Frame = 0

Query:  158 HAAPIAHAVPVAHPVPVVNAAPVPIAAPALVPLPTPEHPEASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPAT 270
            HAAP A      H  P       P AAP       P    ASSQFH+QDEFGN ++GYSNINSAK E GN + GV G Y YVD  GV Q VSYVAD  GFR   + +PV+PA 
Sbjct:  104 HAAPYAAGYVAHHAAPYAAGYVAPHAAPYAAGYGYP----ASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAV 212

[Close]

BLAST of cuticle protein 6 vs. nr
Match: gi|290561232|gb|ADD38018.1| (Cuticle protein 6 [Lepeophtheirus salmonis])

HSP 1 Score: 98.5969 bits (244), Expect = 1.048e-20
Identity = 46/71 (64.79%), Postives = 53/71 (74.65%), Query Frame = 0

Query:  198 ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSP 268
            ASSQFHAQDEFGN ++GYSNINSAK E GN + GV G Y YVD  GV Q VSYVAD  GFR   + +P++P
Sbjct:   89 ASSQFHAQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPIAP 159

[Close]

BLAST of cuticle protein 6 vs. nr
Match: gi|155966346|gb|ABU41125.1| (putative cuticle protein [Lepeophtheirus salmonis])

HSP 1 Score: 99.7525 bits (247), Expect = 1.128e-20
Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 0

Query:  198 ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPAT 270
            ASSQFH+QDEFGN ++GYSNINSAK E GN + GV G Y YVD  GV Q VSYVAD  GFR   + +PV+PA 
Sbjct:  132 ASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAV 204

[Close]

BLAST of cuticle protein 6 vs. nr
Match: gi|155966218|gb|ABU41063.1| (putative cuticle protein [Lepeophtheirus salmonis])

HSP 1 Score: 99.3673 bits (246), Expect = 1.274e-20
Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 0

Query:  198 ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPAT 270
            ASSQFH+QDEFGN ++GYSNINSAK E GN + GV G Y YVD  GV Q VSYVAD  GFR   + +PV+PA 
Sbjct:  132 ASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGRYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAV 204

[Close]

BLAST of cuticle protein 6 vs. nr
Match: gi|155966338|gb|ABU41121.1| (hypothetical protein, partial [Lepeophtheirus salmonis])

HSP 1 Score: 98.9821 bits (245), Expect = 1.289e-20
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 0

Query:  198 ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPAT 270
            A+SQFH+QDEFGN ++GYSNINSAK E GN + GV G Y YVD  GV Q VSYVAD  GFR   + +PV+PA 
Sbjct:  128 ATSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAV 200

[Close]

BLAST of cuticle protein 6 vs. nr
Match: gi|225712016|gb|ACO11854.1| (Cuticle protein 6 [Lepeophtheirus salmonis])

HSP 1 Score: 99.3673 bits (246), Expect = 1.425e-20
Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 0

Query:  198 ASSQFHAQDEFGNYEYGYSNINSAKRERGNAHNGVEGSYSYVDGYGVPQQVSYVADDFGFRVAGTNIPVSPAT 270
            ASSQFH+QDEFGN ++GYSNINSAK E GN + GV G Y YVD  GV Q VSYVAD  GFR   + +PV+PA 
Sbjct:  128 ASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAV 200

The following BLAST results are available for this feature:

BLAST of cuticle protein 6 vs. L. salmonis genes
BLAST of cuticle protein 6 vs. SwissProt
BLAST of cuticle protein 6 vs. nr

BLAST of cuticle protein 6 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 8


Match Name	E-value	Identity	Description
EMLSAG00000012778	8.192e-24	46.92	supercontig:LSalAtl2s:LSalAtl2s96:46461:47672:-1 g...	[more]
EMLSAG00000011034	5.863e-23	54.17	supercontig:LSalAtl2s:LSalAtl2s743:38931:72657:1 g...	[more]
EMLSAG00000011035	1.571e-22	61.97	supercontig:LSalAtl2s:LSalAtl2s743:76924:89115:-1 ...	[more]
EMLSAG00000002943	6.886e-19	40.30	supercontig:LSalAtl2s:LSalAtl2s168:685699:687161:1...	[more]
EMLSAG00000011961	1.414e-13	31.51	supercontig:LSalAtl2s:LSalAtl2s84:1186001:1208377:...	[more]
EMLSAG00000011036	1.550e-13	68.18	supercontig:LSalAtl2s:LSalAtl2s743:94413:95794:1 g...	[more]
EMLSAG00000005067	1.135e-9	57.78	supercontig:LSalAtl2s:LSalAtl2s266:430378:430665:-...	[more]
EMLSAG00000006400	2.124e-8	47.46	supercontig:LSalAtl2s:LSalAtl2s350:527593:528306:1...	[more]

BLAST of cuticle protein 6 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
gi\|48427979\|sp\|P82119.1\|CUO6_BLACR	1.877e-7	39.19	RecName: Full=Cuticle protein 6; AltName: Full=BcN...	[more]

BLAST of cuticle protein 6 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325277591\|ref\|XP_023323434.1\|	1.557e-22	67.57	cuticle protein 7-like [Eurytemora affinis]	[more]
gi\|1325262447\|ref\|XP_023332447.1\|	7.238e-22	45.13	uncharacterized protein LOC111704439 [Eurytemora a...	[more]
gi\|155966257\|gb\|ABU41082.1\|	9.424e-22	64.38	putative cuticle protein [Lepeophtheirus salmonis]	[more]
gi\|290462935\|gb\|ADD24515.1\|	2.179e-21	38.42	Cuticle protein 6 [Lepeophtheirus salmonis]	[more]
gi\|225712386\|gb\|ACO12039.1\|	3.950e-21	52.21	Cuticle protein 6 [Lepeophtheirus salmonis]	[more]
gi\|290561232\|gb\|ADD38018.1\|	1.048e-20	64.79	Cuticle protein 6 [Lepeophtheirus salmonis]	[more]
gi\|155966346\|gb\|ABU41125.1\|	1.128e-20	64.38	putative cuticle protein [Lepeophtheirus salmonis]	[more]
gi\|155966218\|gb\|ABU41063.1\|	1.274e-20	64.38	putative cuticle protein [Lepeophtheirus salmonis]	[more]
gi\|155966338\|gb\|ABU41121.1\|	1.289e-20	63.01	hypothetical protein, partial [Lepeophtheirus salm...	[more]
gi\|225712016\|gb\|ACO11854.1\|	1.425e-20	64.38	Cuticle protein 6 [Lepeophtheirus salmonis]	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold57_size444674	supercontig	scaffold57_size444674:72597..78267 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:structural constituent of cuticle

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold57_size444674-snap-gene-0.19-mRNA-1	maker-scaffold57_size444674-snap-gene-0.19-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold57_size444674:72597..78267+

gene from alignment at scaffold57_size444674:72597..78267+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold57_size444674-snap-gene-0.19 ID=maker-scaffold57_size444674-snap-gene-0.19|Name=cuticle protein 6|organism=Tigriopus kingsejongensis|type=gene|length=5671bp|location=Sequence derived from alignment at scaffold57_size444674:72597..78267+ (Tigriopus kingsejongensis)
TCGACTCGGTAGGACACGGCGTGTCCGGGGTTGAGTTGGACGGTGGTGAG
GATGGCCTTGCGGACAGCAGGGGCCGAGACAACGGGGCTAGCATAGGCCA
CGGGTCCGGCAGGCACGGGCAGATGGGCGGGTCCGATGGGCAGACCAGCA
TAGGCAGCTCCGGTCAAAGGGGCAGGGAAGGGAGAAGCGTAGCCGAAAGC
GCCCACCTGTCGCTTCTTGCGGCCATGAGTGGCAGGAGAGACGGGAATGT
TGGTGCCACCAACATTCCCGTCTCTCCTGCCACTCATGGCCGCAAGAAGC
GACAGGTGGGCGCTTTCGGCTACGCTTCTCCCTTCCCTGCCCCTTTGACC
GGAGCNCGTGGAGACCCTGAAGGCCAAGATCAGCGAGGCCTGGGACAATT
TGTCAGAGGAGTTTATTATTTCAAGCTGCAAAAGTGTCAGACCAAGAGTC
GAGGCTGTGATTAGAAACGAGGGAGGACATATTGAATAAAGTTTTGTTGT
TCATCCTCCTCTCCAAACTTCATCAAAACAATTTTGTCATATTGTTCCTG
ATTCAAAAGTTATAGCGCTTTTTCTCTTCAAACCTAAATTTTCCGGTTTT
TGCGCCCGCACCCTGTAGTTGTGTTTTTTTAGATTTTACGTGATTAATGA
TGATCTATCCCCAATCAAAAGTTCTGTACTCCTCATTTACTTTTAACTTA
CAGACCTTGGAGTATGATGTGCCCATTTTGGGGTTTGGGATTTCAAAATA
AACTTATTTCTCCTTAATTATTCCATCTTCATGAAAGAAAGTAAACGAAA
AACAGTTATTCTTTCTTCCTCTCACTTTTGTTCGATTTCTAATTTTGGCG
CTTTTTCGTTCTTGTGAGGTCGGTGTCTGCTGACAAGCGACCCCATAACA
ATAGAGTGTCCAGACTAGGAATACTGTGTCTTTAGTCGCGGTTGGATACC
ATTGTTTGCTTCCCTCCCTTACCTATTTCAAGCGTGACCAGCTATTCATC
GAGAGGCTCTCTTTGAACTGCCAGGGTGACTTCCTATGTACAGCACAAGT
TGAGACACATTTAATGGTGGATAGAGGCATTTCAAGCCAAGTGTGAGCCT
AATTATCGCGTGTTTGATAGGTTGTAATCCTTTCTTGCTCTTTGCACCAT
ATCGATTTCCCACTGGGAATGGATGAAAAAATCATCTAAACCTGGGAGTT
TTTACTGCATAGCCACTACTGAAGACGTAGGCAAAATGTGACTCCGTCGC
CGCAATGAGCGCTGCGGAGGTCACTCGACAGCTAAACGCTCTACAATTTT
CTACATGAATAACGGCAAAAAGCATCAGATCGGGCTTCTTCGTTTTTCTA
TTCTATGGTATAACTGCATACATGTATGTATATGCGAATATCTTTAGAAA
CAAATTCGTAGAAGGGAAATTAAGCCTTAACTTGCGAAAGTTTTCAGCAG
TGAAGTGAAATTGACCATATTAAGTAGCAAAGTTCGCACACGTGTCAATT
TGCATCAACTAGGTACAAAAAATAGAGACGGCAACGGAGATACGGATGCA
AGTTGGTGTTACTATCCGCCATTTGGTAGAGCTATTGTTTTTAAAAATAA
TTTTGAGCGCACTATGATCAGTAACGCTTGTCAGAGAGTGCTTCACGAAA
AGTCATTTTTTTGCCTTTTTCCAGATACAGAATGCAAATTGAAATACAAT
GCTGATGAATCGTGCAGCCTTTCGAACACGAAAACACCAATGAAGATTAG
AGAGCGTCAAACCTTGACCTAGCAATATATAGCGCAACGGAGTAGCATTT
ATTGTAATGCTTGCACGTTTTGAGCATTTATCACTGATGTGTCCTTGTCC
GAAAAACATTTCCTATTAGCCCGTAGGCGAAATGAGCTTACCAACGACTG
AGTCATGAAGGTGCCCAAAAGAAAAAACTCAATTTCTCGCCCTCTCTTTC
TATAGATAACAAATTTATAGGCTACAGAATAAAAGTGTTTAGGTAAAATT
TTGTATTAATGGGGAAGCCACCATAGCTCAGTGTCAGGGAGCGCTGCCCG
GGTGCAGAGTGGCCAGGGTTCGAATCCCGTGCAATTCCAGCAGATCACGG
CAACAAGCGGAGCTAATTATCACAGCTAATGTTTGCTTCCTTGGAATTTT
AAGCGAAAAAGGGTAATAGTACATTATTATTTTAAACAGTTTTAAGCTTT
TTTCTAGGTGGTTGACAAGCAGACTTTTCTTTTGTTACAACTATATTCCT
GTGTCTGTCATTCCTGCTTTTATAAGCTATGACAGTGAAATCTTGCCAAA
AAACATTTAATTCCTTTGAAGTTTTCACTTCTAGTGTTTTCGATTTAACC
TAGCAGATGCCCTTTATAACCAAAATAATCACTTTCTCAGTACACTATAC
ATATTGCTAATATTCTGACGATCACTTCCAATTAATATACTGACATGCTT
TGAAACTATTCGTATGTAAACTACCCAAAATATCAACTTGTATTTTGGGT
AACCCAACTTTTTTCCCGGCCTTTTGTAACAGCTTTAAACACACTTGAAC
GTCCATTTTGATTCGAGAGCAGACTCCTTTTGTCCACTCCTCATTGTATC
AACATATGTTGCGTACAATCGAATCAGCAGTGTCGTTAAAAAACTGTTTC
GCAGTTGGCTTGTTAACAAAGTATTCACTGTACTTGGAGTGAGCGACCAT
TGTTTTGCTTGGCCAAAGTTGTCGACAATACATCATTTATAGTCCATTGT
AGGTTTCCGTGCCGAGAAAAGTCCAAGGGAGTAAATATCTCTCTCTCGCT
GTTTGAACTTGTCCTTGAGATTCCTATTTTTACATCCATCCGCTCTTAAG
AGCAGGCCAATCACATCCACAGATCCAAAAGGAGTTCATTTTGAAGCAAG
TCTCGCGCTTTGAAAAGGAACTTATCCTCCATTCACGCAATTGTGGTGCT
TGAATTTCAAAGCCATACTCGGCACAATCCTCTCCCCAAGACGCTATGCA
TGCCACTGGCGGTGCTTTACCTGAATGGGAGCTCACATTTGACATTTAAA
CCAAGCCTGGCCCACAACCGCATGACCAACTCACGTCTCGACGAGTGTTT
TGCTTCTATTCTTTCCCAATTACGTCATCCAATCCGATGAACTGTCTTAA
TAACTGACATAATTCACCTCAGGGCGGTGATAACCTCCCCGAACTGCAGG
GTCGGATTCACAAAAAGGGGGATTATGACGTAATGTGGCCAATATTTTTA
CTTAAAATGTGCCTTATCACCCTGCTCTAACGCCCCAAAGTACCTGTCAT
CTTCCCATCGTTATGGATCTTCCACCAAGCCCAAGTTGACGCTTTCATTC
GCACCTAAGACACCTGAGAGCTTGGGGCAAGATTGCTTCTCTGGTTCTCC
TCAATCCACCTACAGAACCATACATGTACTGTGTTTATGTACTATATACT
AGTGCTGTAGGAGACTCGTCTATGAGTAATATGACGTCCCTTGGAAAACA
AACTTGGGTACACCAATCCATGGACATGGCCAATCCATCATGGTGATGTG
ATGAACAAGGACTATATAAGTGGTGCTTGTAAATCAGATGTAGGGTAACT
CCTAGTAGTGATGGCCAAAATATGAAAAAGCAATATTTTGTTCATGAGCT
TTTTTCCGACGTATTTTAAAACACGGGGCTGTAAACCTATTTTTATATGT
AGGAATAAACGATTACACACTGGCTGGAAGGATGCACCTGTGCTCATTTG
ATTAAGAAGCTGCCAATTGTTGTTTAGATAGACTATTACAAATCCATGAG
TCCAAATTGTTTTCGTTACTTTGGGATGGTATCAAATTGAGAAATTTAAT
TATTAAACTAACCCTTTCTCAAGACCAAACAAGGCACACAAAGACAAGGC
AAACAAACGCACGTGCGTACATAACTGTAATCTGAGAAGAATTAAAGATT
GAAGGGGGATTGAACTATACCTCTAGTAAACCAGTGACGTTTTTGTTTTG
TGTTCCGTTCGTCTCAAACATTATGTGCGTATGATTGAGCTAGTGTTTGT
GCAATAATTAAGTTTCCTCTATTATTTATCGAAAAGGCTCCATGATCTAT
AACTTGTTTACAAAGTAACTTCCGACTTATGTTTTACCAAGTTCTTATGG
GCACATAGCATAGCAAATACATTTTTACTAGGAGGATCAATTTACGTGCA
CATTTTATCACACTTATGCGCAATATTTAATTACATTTTCTACATCTTCA
TGAGCCAACAAAGCTCAATATACAGTACAAAAAGCATGATAACCATTTCA
TCTGACTTTAGGGAGACCCAGGATGTAGATTTATTTTTCCTCTCCAATAT
CTACGTATATTTGATGGTCATAAGAAATTCTCGACTAATGTTTTTTTTGT
AATTAACTCTGTTGGTTTGGCCCGGACAGATTGGCTATCATGCACGAATT
CAGGGATTGTTGGAGAACCAAGAGGAATGCCCCGCTTTGGCTTGGGAATG
ATTGTGGCTCGCCTTTCGTGGCACAAAGAATACATCAGCCAGTCCGATCT
TCATGAGCGCCTGTGATGTGATAATTTGTGTCCACCCACCACCCAGAGAG
GGCGATCCCTTCAGCGCCTGATGGTCCTGGCGATAACGATTGTCTGCATG
ACCGATGCCGGTACACTACTTCTAGGGAGTCTCATCATCCTCAGCCAATT
GCCTCTCCCTTGCCAAACCTTAGATTGTGAGTATAAAAGGGCCCGGCAGG
GGATTTGGGACACCACACATCGTTTAGCTGTGCAGAGGCTGAGACAATTT
GATAATGAAGTGCTTTGTAAGTGGATGGTTTTCAGGGTTGCTTGAACACG
GCTTACCATTTGCTTCCCCCCTTAGATTACCCTTGCTACCATCATGGCCG
TGGCTGCCGCCGAGGCTCAGTACTATCCCCTTCCCTTGGCCCGGACAGTG
AATGCTTACAGGACCGTGTCCTCGCTTTCGCACCCCGGTGCCCATGCCTT
CGTGGGCGGCCGACGCCCCCTCGTGGGCGTGCCCGCCGTGCCCGCTCCCC
ACTTCCGGGCTGCGGCACCCTTCGCTCATGCCGCACCCATTGCTCATGCC
GTGCCTGTGGCCCATCCCGTGCCCGTGGTGAATGCTGCCCCCGTCCCCAT
TGCCGCTCCCGCCTTGGTGCCCCTGCCCACTCCTGAGCACCCCGAGGCCA
GCTCGCAGTTCCACGCTCAAGATGAGTTCGGAAACTACGAATATGGATAC
AGCAACATCAACTCAGCCAAGCGAGAGCGAGGAAACGCCCACAACGGCGT
CGAGGGAAGCTACTCTTACGTCGATGGATACGGTGTGCCCCAACAAGTGA
GCTATGTGGCCGATGACTTCGGTTTCCGTGTGGCCGGCACCAACATTCCC
GTCTCTCCTGCCACTCATGGCCGCAAGAAGCGACAGGTGGGCGCTTTCGG
CTACGCTTCTCCCTTCCCTGCCCCTTTGACCGGAGCTGCCTATGCTGGTC
TGCCCATCGGACCCGCCCATCTGCCCGTGCCTGCCGGACCCGTGGCCTAT
GCTAGCCCCGTTGTCTCGGCCCCTGCTGTCCGCAAGGCCATCCTCACCAC
CGTCCAACTCAACCCCGGACACGCCGTGTCCTACCGAGTCGACTAAAACA
CCAACCGTTAAAATCTAAAAA

Synonyms

The feature 'cuticle protein 6' has the following synonyms


Synonym
Tk04355

Add to Basket

Pages

Search form