down syndrome cell adhesion molecule isoform x1, maker-scaffold61_size441589-snap-gene-0.14 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000005454 (supercontig:LSalAtl2s:LSalAtl2s293:185286:259880:1 gene:EMLSAG00000005454 transcript:EMLSAT00000005454 description:"maker-LSalAtl2s293-augustus-gene-2.25") HSP 1 Score: 1004.2 bits (2595), Expect = 0.000e+0 Identity = 662/1622 (40.81%), Postives = 868/1622 (53.51%), Query Frame = 0
Query: 404 LIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPK-------QQVVDYGRSATFKCHY-DGNPVKSVYWLKNGEPVGHTET------------TLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSA-FDAVTTQPGPMVSLKC-VAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEK------DGRQLPF----------NDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDG---SLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPS--FEIK---KRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYG----LKVVDKTGRTVKLSWQAPY--NGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVNLVVPVVAAIAVIVVAIAVICVLRNGRREYPKGTIAPPFGK----DTKATQAGFPGLPDWLDLDIIVPVVATVIVICVGILVVCVALTRRKHPPPLMHPEEYAQYYGQMNTNGRMMTM--------------KHDGLPYEEMGYCPPPNR--------KLPPVPGTHSNYNTIDRIKNGHKTKGAGAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPANFQTLPPGAGGAQTGPNTPARHLSQTMNPRRSIANPGGPMQPALYDSVNCDYEPG--TYQAPQNQNFGNPYDCPEGMYGGSMVSSV-GYSKVSDH 1943
L I GKY C N G + T TA L V P ++V++ G A C G+ SV W +G+ VG T+T L INSV RG Y C N+ T +L++ +PP V F G + C + +GD ++ W +G E G +G ++ G S L I+ K+ G Y C AS+K G S +A+L +N P + + G + C G+P + W K Q P NDR +GTL I N+Q K + Y C A N G + ++V PP+ I + + L TV + C+A G + W +NN ++ D + D R I DG ++ IK ++G+ + C A+N G + +Q P +++K K +T +S T + + + I + ++D +++Q + + +S F VA N G S + I+ E P G ++V +T+++SW+ P + N ++ Y + +K AN + +P Y F V G + I E V A V Q ++GQGPMS E L H AEGAPT+ P ++ + TLSSQ+IKVTWSSPPLASA+G+IKGYKV+YGPSK WYDPS+ TK+S+D +AELT L++YTNY++QVLAFTNGGDG K+EV T+TTEQDIPGPPSSVKALAMS+++ILVSWQ P+E NGKIIQYTVYIKELDRSRDIAP + KV++LQMS Q+DNL+ KARYEFWVTAHT+IG G S KVTL+PT+RIPAKIASF + + A+ K D++LPCIAVG P P LHWK+ G PIP+NDRIRQLPDGSLQITR+ K+D +Y CMVNNKYGQD V H+L+VNGPPDPPE+++T+QT D+ITVK+K + DK+ +HG+ +HYKPEFGDW+TA +P+GS+EF LD LLCGQRYHLY TA+N IG+G S Q+T TKGV+PTVP+AHRFLEVSAGSVTLHLNAW+DGGCP+ YF+VEYKP++H+DWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTV GG +APVREI G +G++ E++LMYFLTNVNL+VPV AA+AVI +A AVICV+R +PK A +G+ + + GLP + ++ P RK PP Y N N + + ++D +PY +MG PPP+ LP VP +S I + + G G+ D D PY L + KG +P P+ S + +P +Q H G+ NTP +H+SQTMNPR+ N P +YDSV DYEPG +Q QNFGNPYDCPEGMYGGSM+SSV GYS+VSDH
Sbjct: 1872 LAINSVNYSHQGKYTCQAKNKAG------IRTHTAELKVNEPPMIGPFAFPKEVMNEGNFAQLTCVVTSGDLPLSVTWTFHGDKVG-TQTGITTTNLGPRLSLLVINSVGYRHRGNYTCXASNNAGHDSYTAKLRVN---EPPSLVPLNFGKNVFSEGSFAQVVCTITEGDEPIKISWSFHGESLEDSG-QNIGIAITNIGSRTSILIINSVEHKHRGNYTCSASNKAGNSSDTAQLKINVRPRWTVEPTDKHFAQGSEAKIDCKSDGFPQPKIVWRKAIGLPVSNEQXPTPSDYKDLDVSNDRNMKIIDGTLIIKNIQ-KSNEGFYLCKASNGIG-GISAVAKISVQAPPSF--------------------EIKKRTQTALISDNTV--------------LQCEAKGEKPIGVLWN---MNNKRL-----DAKVDDRYTIREEVIDDGVLSTISIKRTERGDSALFTCVATNAFGSDDTSINLIIQENPETPYDLKVLDKAGRTVKLSWQTPYNGNSNLTRYV-IEFKPTKGSWKNDIDHVLVPGDQNQA-------VVYSLKPANSYHFRIVAQNVIGVSGPSDTITIETAEEAPSGPPVDIRVSAVDQQTLRVSWKPPLTEHWNGDILGYYVGYKAT----ANSEE----------------KP---YLFETVEFRK--EQGHEHQLQISNLE-------VFTEYAVVVQAFNKIGQGPMSXEXLXHXAEGAPTESPQDIDLVTLSSQSIKVTWSSPPLASAHGIIKGYKVIYGPSKVWYDPSSHATKISSDMQAELTGLQRYTNYSIQVLAFTNGGDGTKTEVFTTTTEQDIPGPPSSVKALAMSDDSILVSWQLPKEQNGKIIQYTVYIKELDRSRDIAPTSRKVDSLQMSLQIDNLSSKARYEFWVTAHTSIGGGPRSKKVTLTPTDRIPAKIASFGNSYSAIAKTDIQLPCIAVGFPIPALHWKIDGMPIPENDRIRQLPDGSLQITRISKDDAAQYTCMVNNKYGQDTVIHQLIVNGPPDPPEMSLTAQTXDSITVKIKPTKNVDKSSIHGFTIHYKPEFGDWSTASVPYGSEEFILDELLCGQRYHLYATAYNDIGIGDISPQVTTKTKGVQPTVPDAHRFLEVSAGSVTLHLNAWIDGGCPMKYFMVEYKPKNHKDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVKGGALAPVREIPG----MEEGQSELEKALMYFLTNVNLIVPVAAALAVIFIAFAVICVIRGRNHSFPKEEYAQYYGQMNTMNARMMTTKRDGLP-YEEMGYCPP-------------------PNRKLPPVPGQHSNYNTIDRIKNGNKKQPSYTTWDPRKKQGQEMPQYDEIPYGDMG--PPPSSNAVPISKGNLPQVPDEYSQVPMIPQRQVG------GSIGNADE---------DISPYATFHLLGMREENKGGMP--PNATSNIQTLPHKQ------------------HQNGVS--------------------------NTP-KHISQTMNPRK---NEAVNQPPPMYDSVVGDYEPGHPNFQ----QNFGNPYDCPEGMYGGSMMSSVAGYSQVSDH 3303 HSP 2 Score: 658.292 bits (1697), Expect = 0.000e+0 Identity = 339/625 (54.24%), Postives = 419/625 (67.04%), Query Frame = 0
Query: 331 KLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALIS-ENTVLQC-EAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPE 953
K ++ +P+ S PKFS++ K + + +G + A+ CPA PIP FRWYKFME+NNNKKLV LDDRVK VGGTLIIKEAKV+DSGKYLCMVNNSVGGESVETVLTVTAPLSV+VEPK QVVDYGRS TFKC+Y GNP+K V+WLKNG+ + H E TLRINSVKK+DRGMYQCF+RN+QESAQAT ELKLGGRFDPPEF+S F+ +PG +S+ C+AKGDP+P +KWFIYG E +++G + VGSF NGDV S+LNISQ +T++GGTYECQASSKVG +SH AKLNV GAPYV+KM PMKVVAGKSMF+TCPVAGYPIS++ WEKDGRQLPFNDRQTV+ NGTL IS++QRKEDAS YTCVA NDEGYSARSDL V+VME P IVPF FG D ++EG +AQV C + RGD P ++ W++ K S+ + G P+ I L I ++ + G Y C A N G IS + V PPS + L E L C +KG++P+ + W + K D + +P + + +L +I S ++TC + N G S L + E P+
Sbjct: 77 KRILHKPVGSSLPKFSTVGKSTTLEFKEGLSFALICPAMASPIPSFRWYKFMEANNNKKLVKLDDRVKXVGGTLIIKEAKVEDSGKYLCMVNNSVGGESVETVLTVTAPLSVDVEPKTQVVDYGRSVTFKCNYKGNPIKEVFWLKNGKSINHNENTLRINSVKKDDRGMYQCFIRNEQESAQATAELKLGGRFDPPEFISHFEETIVKPGGYLSISCIAKGDPSPNIKWFIYGKEVKNEGAITVGSFRDANGDVTSHLNISQVKTQFGGTYECQASSKVGKISHMAKLNVFGAPYVKKMRPMKVVAGKSMFITCPVAGYPISNIVWEKDGRQLPFNDRQTVFPNGTLIISDIQRKEDASVYTCVAXNDEGYSARSDLEVSVMERPEIVPFFFGSDSVDEGLYAQVSCIVQRGDTP-IKISWSL----KGDTVSSEPGMTTSQVG-PRASI------------------------------------LSIHSVGYRHSGTYTCTAQNKAGIISYSTSLTVNEPPSLMPLTFGRDILDEGEFAQLICIVSKGDEPLTMSWTL--KGDDVSSEPGLSTTKIGTRTSIL---TINSVGYRHSGVYTCTSQNEAGVATQSAELKVNEPPQ 654 HSP 3 Score: 639.417 bits (1648), Expect = 0.000e+0 Identity = 475/1239 (38.34%), Postives = 624/1239 (50.36%), Query Frame = 0
Query: 404 LIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA------------------PLSVEVEPKQQVVDYGRSATFKCHY-DGNPVKSVYWLKNGEPVGHTE-----------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVS-AFDAVTTQPGPMVSLKCVA-KGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMF-------VTCPV--AGYPISSVTW-------EKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAV---VNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT------WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDG-VKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKE-DTGKYVCMVNN-----KYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKL----KTSNPEDKTPVH------GY---ILHYK------PEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMD-GGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLD-LNPATWYNLRVTAHNNAGF 1555
L+I A+ G+Y+C N G ++ L V PL +V++ G A C G+ + W +G +G + L INSV +G Y C +N T ELK+ +PP AF G L CV GD V W +G + + Q G ++ G +S L I+ ++ G Y C AS+ G S++AKL VN P ++P+ GK++F V C + PI ++W E G+ + R L I++V+ K + YTC A N G N D AQ+ ++ RPRWTVEPTDK FAQGS+AKIDCK+DGFP+P+I W+KA+ V+N Q PTP+DY+D D SNDRN+KIIDG+LIIKNI+K NEG+YLCKASNGIGGISAVAKI+VQAPPSFEIKKRTQTALIS+NTVLQCEAKGEKPIG+LWNMNNKRLD VD RYTIREE +DG+LSTISIKRT+R DSALFTCVATNAFGSDDTSINLIIQE PETPY LKV+DK GRTVKLSWQ PYNGNSNLTRYVIEFKP KG+W ND+DHVLVPGDQ A V+SL+PA SYHFR+VAQN IGVSGPSDT+TIETAEEAPSGPPVDIRV+AVDQ TLR V+W P NG I GY V Y + ++ + +++ ++++L+ +T Y V V AF G G + E L E P + + +S ++I V+W P +G I Y V D + K+++ M ++ L + Y V A T G+G+ + T + IP +S +AM + + QL + G+ I I++L D S I ++ D+ + ++N +Y + VT + G P +VT+T TD I K+ + + KT + G+ LH+K PE + Q+P GS + T S +Y V +N G QL N P P + S+T+ + + I F + YKP DW+ + SV G +LD L Y+L TA+N+ G
Sbjct: 1759 LVINSAQHHHQGEYICQAQNKAGIQTHSAELKVNGTFILMRVADYFYFWFSEPPLIAPFSFANEVMNEGDFAQISCVITSGDLPLLITWSFHGNTIGTNTGIATTNLGPRMSVLAINSVNYSHQGKYTCQAKNKAGIRTHTAELKVN---EPPMIGPFAFPKEVMNEGNFAQLTCVVTSGDLPLSVTWTFHGDKVGT----QTGITTTNLGPRLSLLVINSVGYRHRGNYTCXASNNAGHDSYTAKLRVNEPP---SLVPLNF--GKNVFSEGSFAQVVCTITEGDEPIK-ISWSFHGESLEDSGQNIGIAITNIGSRTSILIINSVEHKHRGN-YTCSASNKAG---------------------------NSSDTAQLKINV--------RPRWTVEPTDKHFAQGSEAKIDCKSDGFPQPKIVWRKAIGLPVSNEQX-PTPSDYKDLDVSNDRNMKIIDGTLIIKNIQKSNEGFYLCKASNGIGGISAVAKISVQAPPSFEIKKRTQTALISDNTVLQCEAKGEKPIGVLWNMNNKRLDAKVDDRYTIREEVIDDGVLSTISIKRTERGDSALFTCVATNAFGSDDTSINLIIQENPETPYDLKVLDKAGRTVKLSWQTPYNGNSNLTRYVIEFKPTKGSWKNDIDHVLVPGDQNQAVVYSLKPANSYHFRIVAQNVIGVSGPSDTITIETAEEAPSGPPVDIRVSAVDQQTLR-------------------------------------VSWKPPLTEHWNGDILGYYVGYKATANSEEKPYLFETVEFRKEQGHEHQLQISNLEVFTEYAVVVQAFNKIGQGPMSXEXLXHXAEGAPTESPQDIDLVTLSSQSIKVTWSSPPLASAHGIIKGYKVIYGPSKVWYDPSSHATKISS-DMQAELTGLQRYTNYSIQVLAFTNGGDGTKTEVFTTTTEQDIPGPPSSVKA--LAMSDDSILVSW--------QLPKEQNGKIIQYTVYIKEL-DRSRDIAPTSRKVDSLQMSLQIDNLSSKARY-EFWVTAHTSIGGGPRSKKVTLTP--TDRIPAKIASFGNSYSAIAKTDIQLPCIAVGFPIPALHWKIDGMPIPE--NDRIRQLPDGSLQITRISKDDAAQYTCMV--NNKYGQDTVIHQLIVNG----PPDPPEMSLTAQTXDSITVKIKPTKNVDKSSIHGFTIHYKPE-FGDWS--TASVPYGSEEFILDELLCGQRYHLYATAYNDIGI 2884 HSP 4 Score: 139.813 bits (351), Expect = 6.466e-33 Identity = 154/575 (26.78%), Postives = 232/575 (40.35%), Query Frame = 0
Query: 404 LIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSV-EVEPKQQVVDYGRSATFKCHYD-GNPVKSVYWLKNG-----EP------VGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKC-VAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMK-----VVAGKSMFVTCPVA-GYPISSVTWEKDGRQLPFNDRQTVYRNGT----LAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSF-EIKKRTQTALISENTVLQC-EAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKP 952
L I+ SG Y C N G S VL V P + + + +D G A C G+ S+ W G EP +G + L I SV G+Y C +N+ S + + L + P +F A + + G + L C V +GD + W + G S + G S L I+ ++ GTY C+A+ G +HSA+L VN +P +LP V G +TC V+ G +TW G + T GT L I+NV + + YTC A N G + S + V E P+I+ FSFG D + EGD Q+ C +SRGDEPL W++ K D + +P IT + + M L+I N+ + G Y C+A+N G + A++ V PP E + + + L C +KG++P+ I W++ + + +P T ML I S +TC A+NA GS S +L+++E P
Sbjct: 799 LTIQSIGYRHSGVYTCKATNKAGSGSQXAVLRVNEPPEILPLSFGKPSMDEGEFAQIVCIVSRGDEPLSITWSLYGAVISSEPSISTNLLGSRXSMLXIQSVGYRHNGIYTCQAKNEAGSMRQSASLIVNE--SPSILPFSFGAESVKEGDINQLTCLVNRGDEPLTITWSLKGDVVSSXPSITTTMI----GTRASMLMITNVGYRHSGTYTCRATXSAGXATHSAELKVNESP---SILPFSFGSNNVKEGDITQLTCLVSRGDEPVRITWSLKGDVISSEPSITTTMFGTRTSLLMITNVGYRH-SGXYTCRASNAAGXATHS-AELNVNESPSILAFSFGSDSVKEGDMTQLTCFVSRGDEPLTI-TWSL-------------KGDVVSS---EPSIT-TTMIGTRVSM------------------------LMITNVGYRHSGTYTCRATNSGGTATHSAELKVNEPPIINEFSFGSNSVNEGDMAQLACFVSKGDEPLRITWSLKGDVVSS--EPSITTTMIGTRTSML---MITNVGYRHSGSYTCRASNAAGSATHSASLLVKEPP 1315 HSP 5 Score: 127.872 bits (320), Expect = 2.167e-29 Identity = 153/594 (25.76%), Postives = 225/594 (37.88%), Query Frame = 0
Query: 404 LIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVT-APLSVEVEPKQQVVDYGRSATFKCHYD--GNPVKSVYWLK----NGEP------VGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKC-VAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKML--PMKVVAGKSMFVTCPVA-GYPISSVTWEKDGRQLPFNDRQTVYRNGT----LAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGS----LIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPS---FEIKKRTQTALISENTVLQCEA---KGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPET---PYGLKVVDK 963
L+I SG Y C S G + L V +P + V G C PV+ + LK + EP G + L I +V G Y C N A + EL + P +F + + + G M L C V++GD + W + G S+ + G VS L I+ ++ GTY C+A++ G +HSA+L VN P + + V G + C V+ G +TW G + T GT L I+NV + S YTC A N G SA ++ V EPP I PFSFG + +NEGD AQ+ C + RGDEPL ITW D +S + G+ L+I ++ + G Y C+ASN G + A++ + PP F +I E + Q KG++P+ I W+++ + + +P T +L I S FTC A+N GS S I E P +G + +D+
Sbjct: 991 LMITNVGYRHSGTYTCRATXSAGXATHSAELKVNESPSILPFSFGSNNVKEGDITQLTCLVSRGDEPVRITWSLKGDVISSEPSITTTMFGTRTSLLMITNVGYRHSGXYTCRASNAAGXATHSAELNVNE--SPSILAFSFGSDSVKEGDMTQLTCFVSRGDEPLTITWSLKGDVVSSEPSITTTMI----GTRVSMLMITNVGYRHSGTYTCRATNSGGTATHSAELKVNEPPIINEFSFGSNSVNEGDMAQLACFVSKGDEPLRITWSLKGDVVSSEPSITTTMIGTRTSMLMITNVGYRHSGS-YTCRASNAAG-SATHSASLLVKEPPIINPFSFGAEPVNEGDVAQLTCLVRRGDEPL--------------------------------SITWSLK--------------GDIISSEPSMTTTMFGTKASMLMITDVGYRHSGTYTCRASNDGGFDTYSAELKINEPPQIAPFSFSPH----VIDEGSYAQISCSVTKGDEPLTITWSLHGAVISS--EPSITTTMIGTRTSIL---IISEVGYRHSGKFTCRASNPAGSVRYSTEXSINEPPRIVPFSFGSESIDE 1521 HSP 6 Score: 126.716 bits (317), Expect = 4.854e-29 Identity = 176/761 (23.13%), Postives = 280/761 (36.79%), Query Frame = 0
Query: 226 GQIHVVYQPYQQEASNEYVIVGNSALFKCEVPSF-VADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHR--LTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVE-VEPKQQVVDYGRSATFKCHYD-GNPVKSVYWLKNGEPV-----------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVS-AFDAVTTQPGPMVSLKCVAK-GDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSY---LNISQARTKY--GGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMF--VTCPVA-GYPISSVTWEKDGRQLPFNDRQTVYRNGT----LAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWK--KAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPS-FEIKKRTQTALISENTVLQCEA-KGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKP 952
+++V PY ++ V+ G S C V + ++++V W + +G ++ + V P+G L I ++ + Y C + + + L + + P G +G V+C Q P+ + + + +V L I SG Y C N G S T LTV P S+ + + ++D G A C G+ ++ W G+ V G + L INSV G+Y C +N+ A + ELK+ +PP+ + F G L C+ + GD + W + GDV+S L+ +Q Y GTY C ++K G S SA L VN P + + + V + F V C V G S+ W G + + GT L I ++ + + YTC A N G S + V EPP I+P SFGK ++EG+FAQ++C +SRGDEPL ITW AV+++ P+ + S L I+++ + G Y C+A N G + A + V PS ++ + L C +G++P+ I W++ + + P T ML I S +TC AT + G S L + E P
Sbjct: 362 AKLNVFGAPYVKKMRPMKVVAGKSMFITCPVAGYPISNIV----W-EKDGRQLP------FNDRQTVFPNGTLIISDIQRKEDASVYTCVAXNDEGYSARSDLEVSVMERPEIVPFFFGSDSVD-----------EGLYAQVSCIVQRGDTPIKISWSLKGDTVSSEPGMTTSQVGPRASILSIHSVGYRHSGTYTCTAQNKAGIISYSTSLTVNEPPSLMPLTFGRDILDEGEFAQLICIVSKGDEPLTMSWTLKGDDVSSEPGLSTTKIGTRTSILTINSVGYRHSGVYTCTSQNEAGVATQSAELKVN---EPPQLMPLTFGDDVLNEGEFAQLFCIVRVGDEPLTLTWAL-------------------QGDVISSEPGLSTTQLAVGYXHSGTYTCTVTNKAGSDSQSAILKVNEPPRILPLTFGQEVMNEGQFAQVVCIVTEGDEPLSIGWXLQGXXIXSXPSLSXSSLGTRTSMLTIQSIGYRH-SGVYTCKATNKAG-SGSQXAVLRVNEPPEILPLSFGKPSMDEGEFAQIVCIVSRGDEPL--------------------------------SITWSLYGAVISS-----EPSISTNLLGSR-------XSMLXIQSVGYRHNGIYTCQAKNEAGSMRQSASLIVNESPSILPFSFGAESVKEGDINQLTCLVNRGDEPLTITWSLKGDVVSSX--PSITTTMIGTRASML---MITNVGYRHSGTYTCRATXSAGXATHSAELKVNESP 1027 HSP 7 Score: 118.242 bits (295), Expect = 2.274e-26 Identity = 148/578 (25.61%), Postives = 218/578 (37.72%), Query Frame = 0
Query: 404 LIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSV-EVEPKQQVVDYGRSATFKCHYD--GNPVKSVYWLK----NGEP------VGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVS-AFDAVTTQPGPMVSLKC-VAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVR--KMLPMKVVAGKSMFVTCPVA-GYPISSVTWEKDGRQLPFNDRQTVYRNGT----LAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGF-PKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPS---FEIKKRTQTALISENTVLQCEA---KGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKP 952
L+I SG Y C NS G + L V P + E V+ G A C P++ + LK + EP +G + L I +V G Y C N SA + L + +PP +F A G + L C V +GD + W + G S+ + F G S L I+ ++ GTY C+AS+ G ++SA+L +N P + P + G ++C V G ++TW G + T GT L IS V + +TC A N G S R ++ EPP IVPFSFG + I+EG FAQ+ CSIS GD P + W++ K D +P IT R +I I ++ + G Y C A N G ++ + + V P F K +++E Q +G+ P+ I W+ + + + TN T S +S + I Q +TC A N G S + E P
Sbjct: 1183 LMITNVGYRHSGTYTCRATNSGGTATHSAELKVNEPPIINEFSFGSNSVNEGDMAQLACFVSKGDEPLRITWSLKGDVVSSEPSITTTMIGTRTSMLMITNVGYRHSGSYTCRASNAAGSATHSASLLVK---EPPIINPFSFGAEPVNEGDVAQLTCLVRRGDEPLSITWSLKGDIISSEPSMTTTMF----GTKASMLMITDVGYRHSGTYTCRASNDGGFDTYSAELKINEPPQIAPFSFSPHVIDEGSYAQISCSVTKGDEPLTITWSLHGAVISSEPSITTTMIGTRTSILIISEVGYRHSGK-FTCRASNPAG-SVRYSTEXSINEPPRIVPFSFGSESIDEGSFAQLTCSISHGDVP-VSISWSL-----------------KGDVISSEPSITTTMV--------------------GGRTSILI-----ISSVGYRHSGDYTCNAKNIAGMVTYTSTLLVNEAPEIGPFSFSKN----IMNEGDFAQLTCVVNRGDLPLTITWSFHGENIGTN-----TGIITSNLGPRMSMLVINSAQHHHQGEYTCQAINKAGIRTHSAEXKVNEPP 1699 HSP 8 Score: 114.005 bits (284), Expect = 4.090e-25 Identity = 100/365 (27.40%), Postives = 153/365 (41.92%), Query Frame = 0
Query: 404 LIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVE-VEPKQQVVDYGRSATFKCHY-DGNPVKSVYWLKNG-----EP------VGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVS-AFDAVTTQPGPMVSLKC-VAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMF--VTCPV--AGYPISSVTWEKDGRQLPFNDRQTVYRNG---TLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPL 746
L+I + SG Y C +N G ++ L + P + V+D G A C G+ ++ W +G EP +G + L I+ V G + C N S + + E + +PP V +F + + G L C ++ GD + W + G S+ + G S L IS ++ G Y C A + G+V++++ L VN AP + K + + F +TC V P++ +TW G + N G ++ + N + YTC A N G S V EPP I PFSF +V+NEGDFAQV C ++RGD PL
Sbjct: 1375 LMITDVGYRHSGTYTCRASNDGGFDTYSAELKINEPPQIAPFSFSPHVIDEGSYAQISCSVTKGDEPLTITWSLHGAVISSEPSITTTMIGTRTSILIISEVGYRHSGKFTCRASNPAGSVRYSTEXSIN---EPPRIVPFSFGSESIDEGSFAQLTCSISHGDVPVSISWSLKGDVISSEPSITTTMV----GGRTSILIISSVGYRHSGDYTCNAKNIAGMVTYTSTLLVNEAPEIGPFSFSKNIMNEGDFAQLTCVVNRGDLPLT-ITWSFHGENIGTNTGIITSNLGPRMSMLVINSAQHHHQGEYTCQAINKAGIRTHS-AEXKVNEPPLIAPFSFANEVLNEGDFAQVTCVVNRGDLPL 1730 HSP 9 Score: 110.153 bits (274), Expect = 5.813e-24 Identity = 165/701 (23.54%), Postives = 265/701 (37.80%), Query Frame = 0
Query: 295 GELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEP-------KQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSD-----NGDVVSYLNISQA-RTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVR-KMLPM-----KVVAGKSMFVTCPV--AGYPISSVTWEKDGRQLP----FNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTAL-ISENTVLQCEAK-GEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPE 953
G L I+ +D K Y C + + GE+ + L +T PL+ + +V G ++ C +G PI W K +S N+ + TL I K DD G Y C + N E T L +P ++ +V G + C G+P ++ W G+ V G + L I+ VK + G Y+C + +L + F P +V + G + + C G P + W E DG + FN NG ++ IS R + Y C A + G +SA+ ++ + R +++P V G V+C V PI ++W G + Q R L+I +V + + TYTC A+N G + S ++TV EPP+++P +FG+D+++EG+FAQ++C +S+GDEPL WT+ +G D + G +I + ++ L I ++ + G Y C + N G + A++ V PP L E L C + G++P+ + W + + S E G LST + S +TC TN GSD S L + E P
Sbjct: 148 GTLIIKEAKVEDSGK-YLCMVNNSVGGESVETV----LTVTAPLSVDVEPKTQVVDY-------GRSVTFKCNYKGNPIKEVFWLKNGKSINHNE------------NTLRINSVKKDDRGMYQCFIRN----EQESAQATAELKLGGRFDPPEFISHFEETIVKPGGYLSISCIAKGDPSPNIKWFIYGKEVKNEGAITVGSFRDANGDVTSHLNISQVKTQFGGTYECQASSKVGKISHMAKLNV---FGAP-YVKKMRPMKVVAGKSMFITCPVAGYPISNIVW-------EKDG--RQLPFNDRQTVFPNGTLI----ISDIQRKEDASVYTCVAXNDEG---YSARSDLEVSVMERPEIVPFFFGSDSVDEGLYAQVSCIVQRGDTPIK-ISWSLKGDTVSSEPGMTTSQVGPRASILSIHSVGYRH-SGTYTCTAQNKAGIISYST-SLTVNEPPSLMPLTFGRDILDEGEFAQLICIVSKGDEPLTM-SWTL--------KGDDVSSE---PGLSTTKIGTRTSI------------------------------LTINSVGYRHSGVYTCTSQNEAGVATQSAELKVNEPPQLMPLTFGDDVLNEGEFAQLFCIVRVGDEPLTLTWALQGDVI-------------SSEPG-LSTTQLA-VGYXHSGTYTCTVTNKAGSDSQSAILKVNEPPR 740 HSP 10 Score: 99.3673 bits (246), Expect = 9.422e-21 Identity = 142/562 (25.27%), Postives = 231/562 (41.10%), Query Frame = 0
Query: 526 PEFVSAFDAVTTQ--PGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARND-EGYSARSDLTVT-VMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITW---KKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFG-SDDTSINLIIQEKPETP---YGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLV-PGDQT-----MAGVFSLRPATSYH---FRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQ 1065
P+F + + T + G +L C A P P +W+ + E++ ++ + V L I +A+ + G Y C ++ VG S L V AP + P V G+S+ C G PI V W K+G+ + N+ TL I++V +K+D Y C RN+ E A ++L + +PP IS +E +++P G I C A G P P I W K V N + T ++D A+ D + L I +K G Y C+AS+ +G IS +AK+ V P + K R + ++ + C G I+W + ++L N R+ +G L I+R +ED++++TCVA N G S + + + + E+PE +G VD+ G ++S G++ PIK +W+ D V PG T A + S+ H + AQN G+ S ++T+ E PS P+ +D+
Sbjct: 89 PKFSTVGKSTTLEFKEGLSFALICPAMASPIPSFRWYKF---MEANNNKKLVKLDDRVKXVGGTLIIKEAKVEDSGKYLCMVNNSVGGESVETVLTVT-APLSVDVEPKTQVVDYGRSVTFKCNYKGNPIKEVFWLKNGKSINHNEN-------TLRINSV-KKDDRGMYQCFIRNEQESAQATAELKLGGRFDPPEF---------------------ISHFEETIVKP-------------GGYLSISCIAKGDPSPNIKWFIYGKEVKNEGAI--TVGSFRD--ANGD-----VTSHLNISQVKTQFGGTYECQASSKVGKISHMAKLNVFGAPYVK-KMRPMKVVAGKSMFITCPVAGYPISNIVWEKDGRQLPFN------DRQTVFPNGTLIISDIQR--KEDASVYTCVAXNDEGYSARSDLEVSVMERPEIVPFFFGSDSVDE-GLYAQVSCIV-QRGDT----------PIKISWSLKGDTVSSEPGMTTSQVGPRASILSIHSVGYRHSGTYTCTAQNKAGIISYSTSLTV---NEPPSLMPLTFGRDILDE 571
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000011601 (supercontig:LSalAtl2s:LSalAtl2s800:5918:93267:1 gene:EMLSAG00000011601 transcript:EMLSAT00000011601 description:"maker-LSalAtl2s800-augustus-gene-1.51") HSP 1 Score: 438.728 bits (1127), Expect = 1.284e-128 Identity = 305/1079 (28.27%), Postives = 473/1079 (43.84%), Query Frame = 0
Query: 623 APYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARN--DEGYSA--------------------------RSDLTVTVMEPPAIVPFSFGKD---------------------------VINEGDFAQ-----VMCSISRG----DEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGI-GGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPI---KGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRM------------------------------------GQGPMSDEVLV---------------HTAEGA-----PTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEA-ELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTA-QIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVK-AGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAP 1574
+P++R + +K + GK + ++CPV+GYPI S+ W++DG + P N RQ+V+ NGTL I ++ ED YTC A N DE ++ RS ++ ++E + FS+ +D VI E F + S S G L+ P+W P D G++ I C+ +G+PKP ++W K G Y C A NG+ GIS + V +PP F +K E +L CE G++ I ILW N + D RY+I G +S I +D+ TC A N +G D L +++ P +P G+++ + R++++ W+ P++GNS++ Y++E+ + + + PGD + +LRP T Y F V+A+N G+S S V I T EE P PP ++ V + LR+ +S+ VL+ + EG P PP E +LS +++V WS P NG+I+GY V Y P + +YD TD+E L SL K+TNY++ V AFT G KS L T++D + + E ++L Y E + ALQ + RY+ WV A T+ G GSPS ++ + I A+I SF + K+++ L C+ VG P P + WK RG I +N + + P+GSL I + + D Y C+V N +G D V + ++V PP P +T+ + T + + + S P K P+ G+ + Y+ E G W+ + PF ++ D L CG Y Y+TA+N +G ST ++A T G P + + + + V + L A+ DGGCPILYFV+EYK +T+VSN+V + + L+P T Y +R+TAHN+AG SV E+ F+TL+ G + P
Sbjct: 1 SPHIRPIPIVKAIQGKDLRISCPVSGYPIQSILWQRDGYKXPSNGRQSVFENGTLVIREARKLEDEGYYTCSAFNPRDESHTGTIQIQVLSPPTIMPFLFPNKLLSEGMRSAVSCQILEGNLPIRFSWNRDGRPIGEDSPKLDRGIYIRSTDQYSSTLVIEELRFRHRGNYTCVASNSAGYASYTTVLIAPKWIRIPEDVHAVDGAEXFIHCEVEGYPKPNLSWNKVTT----------------------------------------GMYTCTADNGVRSGISKTINLTVNSPPRFLEEKVHLAVRKGEKGILICEVAGDENIDILWRRNGMPISEGEDARYSIENHYTLYGSVSRFVISPILDQDAGPVTCEAVNQYGRDQKDFILSVEDIPSSPRGVRISNVGSRSLEIGWEIPHDGNSHILNYLVEYSNLPDERDKGEKQRRKMTAPGDAVNLIIQNLRPGTKYKFNVLAENRHGISSESHAVIIRTQEEPPGSPPRNVEVLSKSSTELRVLWTSPPISNWNSELLSYKIGYKEVGSNSGLQYMYQTSSSHLSESVLLTSLRKFTSYQIIIWPYNKEGIGPSSIPNGPPTEGRCMSLSPSSLEVLWSKPEPEKRNGIIRGYIVKYYPMEKYYDSEGALQTKETDSEIIRLNSLMKFTNYSINVHAFTRAGVSKKSSALFCQTQED--------GKINLKESSVLSGPNYIE----------------------------LGALQYNR---------RYDIWVKAETSAGYGSPSDVTSVILGSTIQAQIVSFGESLTIPWKKNLVLDCLNVGIPIPSIEWKHRGNSIMENSKYQIYPNGSLSIHHIDEGDESDYRCVVQNIHGSDEVVYNIIVQVPPKAPLLTLKNVTFTSARLSWR-STPSIKEPIMGFTIFYRREHGKWHIVKENPFTETDWIHD-LYCGSNYTFYITAYNHVGTSVPSTIISAKTSGFIPEI--TKKVVTSNITMVLVDLTAFYDGGCPILYFVLEYKKDTQPKYTMVSNNVSPLDEEYTIRGLDPGTQYFIRITAHNSAGSSVTEFAFSTLSSLGSELPP 990 HSP 2 Score: 74.7146 bits (182), Expect = 2.366e-13 Identity = 89/391 (22.76%), Postives = 150/391 (38.36%), Query Frame = 0
Query: 358 QGGNIAVTCPAQGYPIPVFRWYK--FMESNNNKKLVALDDRVKQVGGTLIIKEA-KVDDSGKYLCMVNNSVGGESVETV-LTVTAPLSVE--VEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVG----------------HTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKV-GLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGR--------QLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPA 716
QG ++ ++CP GYPI W + + +N ++ V + GTL+I+EA K++D G Y C N T+ + V +P ++ + P + + + RSA +GN W ++G P+G +TL I ++ RG Y C N A T L PE V A D G + C +G P P + W ++ T G Y C A + V +S + L VN P ++ + + + V G+ + C VAG + W ++G + + T+Y + + + + +DA TC A N G + D ++V + P+
Sbjct: 14 QGKDLRISCPVSGYPIQSILWQRDGYKXPSNGRQSVFEN-------GTLVIREARKLEDEGYYTCSAFNPRDESHTGTIQIQVLSPPTIMPFLFPNKLLSEGMRSAVSCQILEGNLPIRFSWNRDGRPIGEDSPKLDRGIYIRSTDQYSSTLVIEELRFRHRGNYTCVASNSAGYASYTTVLIAPKWIRIPEDVHAVD------GAEXFIHCEVEGYPKPNLSW-------------------------------NKVTT---GMYTCTADNGVRSGISKTINLTVNSPPRFLEEKVHLAVRKGEKGILICEVAGDENIDILWRRNGMPISEGEDARYSIENHYTLYGSVSRFVISPILDQDAGPVTCEAVNQYGRDQK-DFILSVEDIPS 356
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000011417 (supercontig:LSalAtl2s:LSalAtl2s789:171282:189366:1 gene:EMLSAG00000011417 transcript:EMLSAT00000011417 description:"maker-LSalAtl2s789-snap-gene-0.24") HSP 1 Score: 328.176 bits (840), Expect = 2.527e-96 Identity = 191/566 (33.75%), Postives = 285/566 (50.35%), Query Frame = 0
Query: 1014 VFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREID 1579
V LRP T YH RV A+N +G S + T E P GPP ++R IT L+S +++VTW P +G I Y + Y R + VST L +LKKY+NYT+QVLAFT+ GDG S+V++ TT D+PGPP + A+ S E+I++SW P PNG+I +Y +Y++ L RD A +++L + +Y+FWVTA T+ GEG S +T + T+R+PAKI+S + ++D+ L C VG+P P W + + +L I + ++ G + C+V N+YG D + + L V PP PP V ++ +DTITV+ K N + +P+ +L+YK +G+W ++ + + L L CG+ YH+Y+ +N +G P S LT +T+G PT P F+ + TL L+ W D C ILYFV+EYK + W V+N ++ + + L P T YNL+VTAH++AG + Y TL AP ID
Sbjct: 6 VQGLRPWTVYHLRVFAENQLGKSKEGKVLQFVTNGEKPGGPPRNLR-------------------------------------ITGLTSTSLEVTWDDPDPKLIHGPIVRYNLGYMEYSF-----LRLSSVST----LLENLKKYSNYTLQVLAFTSAGDGKYSKVISCTTHTDVPGPPERIHAVVQSPESIIISWLPPTSPNGRIERYHIYLRALSHGRDRTHTKYTRPADVRWITIEDLESERQYQFWVTAVTSEGEGMSSNVITQTVTSRVPAKISSISQTVYGLWRKDISLNCRYVGNPTPDKKWLFNDREYSWLQYTNMYGEXNLHIKTLSEQHNGNFTCLVENRYGSDTINYNLKVQVPPKPPIVEVSHTASDTITVRWKVVN-DGNSPITKTLLNYKVTYGEWKDEELAWHQRDHILKGLHCGREYHIYMIQYNILGPSPASDVLTVHTQGSRPTGPPMDNFIVSNVTYFTLRLDQWEDHNCAILYFVLEYKLESSETWITVANDLQLQSRYNIRGLKPDTKYNLKVTAHSHAGSTSVRYSSKTLLENYSGAAPFGNID 524 HSP 2 Score: 75.8702 bits (185), Expect = 8.481e-14 Identity = 48/158 (30.38%), Postives = 79/158 (50.00%), Query Frame = 0
Query: 916 ISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVD-IRVAAVDQHTLRMGQ 1072
+ IK + + FTC+ N +GSD + NL +Q P+ P ++V T+ + W+ +GNS +T+ ++ +K G W D + D + G+ R YH ++ N +G S SD +T+ T P+GPP+D V+ V TLR+ Q
Sbjct: 289 LHIKTLSEQHNGNFTCLVENRYGSDTINYNLKVQVPPKPPI-VEVSHTASDTITVRWKVVNDGNSPITKTLLNYKVTYGEWK-DEELAWHQRDHILKGLHCGR---EYHIYMIQYNILGPSPASDVLTVHTQGSRPTGPPMDNFIVSNVTYFTLRLDQ 441
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000003654 (supercontig:LSalAtl2s:LSalAtl2s199:341388:472828:1 gene:EMLSAG00000003654 transcript:EMLSAT00000003654 description:"maker-LSalAtl2s199-augustus-gene-4.26") HSP 1 Score: 342.428 bits (877), Expect = 4.883e-96 Identity = 208/641 (32.45%), Postives = 329/641 (51.33%), Query Frame = 0
Query: 999 DVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRN----TKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHH---QDWTLVSNSVK-AGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVNLVVPVVAAIAV-IVVAIAVICVLRNGR 1630
++ + V G +T A V LRP T Y VVA N+ G+S P S + +V T EG P+ PP +V SS ++ + W P +A NG+I GYK+ Y + + ++ TK ++D+ + L K+++Y V+ A+ GDG SE + T D+PG P ++ALA+ E +IL++W P NG I Y +YI+ +DI KT V+ +++ L ++ YEFWV+ GEG S + SP ++PA+IASF + VKL C++VG+P PQL W +G+ I +D+ DGSL+I+R+ +E G + C +NN YGQ+ + +E+ PPDPP ++I + + ++ K N + + GY+L+YK FG+W + + +L L CG Y + A N +G G S+ +T +TKG P + + ++ +TLHL W GGC ILY+VVEYK W +VSN+++ + +V DL PATWYNL++TAHN+AG V ++F TLT+ G ++ I S ++G+G F++ LV+P+ I + +++ + V+C R R
Sbjct: 551 NLARMTVRGGRTQALVGDLRPFTKYQVYVVAFNEKGLS-------------------------------------PHSTKTIVSTLEGVPSGPPLKVRCEAESSTSLSIAWRQPEVAHRNGIILGYKISYRLTNVVGQDAGKSDLIRTKKTSDDRISIHQLNKFSSYYVKXRAYXAVGDGYSSEKIICKTGADVPGAPMDIRALAVDESSILITWSPPLNSNGDITSYAIYIQN---KKDI--KTISVSGSEIAFTFRGLMERNHYEFWVSGKNRAGEGEKSHIASQSPAVKVPARIASFPSIIYKALHSSVKLNCLSVGNPLPQLVWINQGRVIKPSDQYELFSDGSLRISRI-EEFMGNFSCQINNLYGQNKIDYEIRTIRPPDPPLMSIKKISNHAVELEWKRPNGGGAS-IQGYVLNYKKGFGEWEQRDLDYDDLHTSLSHLACGSSYSFSIRASNMVGTGLPSSPITTSTKGSIPDIAPMNVLFTPNSTFITLHLYRWPTGGCDILYYVVEYKELEKDMSSSWRVVSNNLRPETEDLLVSDLKPATWYNLKLTAHNDAGSRVLTFKFPTLTMNGEVLS-TEMIQESTPNSGNG---FDQ----------LVLPITFGIILTLLIIVGVVCYARWKR 1133 HSP 2 Score: 203.371 bits (516), Expect = 1.325e-52 Identity = 194/794 (24.43%), Postives = 324/794 (40.81%), Query Frame = 0
Query: 540 GPMVSLKCVAKGDPAPEVKWFIYGSEAE-------SDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSA-KLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRN--GTLAISNVQRKEDASTYTCVARND-EGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKA----VVNNLQMRPTPNDYQDFDASNDRNIKII-DGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMN-NKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLAS-ANGVIKGYKVVYGPSKTWYD---------PSTRNTKVSTDNEAELT-----------SLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYPE--EPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSH---QVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPA 1289
G V L C G P + W G E S+G L + + D +Y+ + Q R +A K+ L++ A K+ AP+ P ++ V +G ++WEKDG+ L + + N G+ + + + + Y C+A N E + S L V V PP+ W + P D S +DC+A G P+P ++W++A N R Y ++ +++ +GSLI+ ++ +EG Y C+ NG+G IS + VQ P F + +TA+ ++ L C A G PI + W +++ + RY+I E + G+LST++I+ +R DS F C A N FG+ SI L + E PE P + + + + R++ L+W Y+GNS + +Y++++K W + + G+ T + LRP T Y+ RV++ N++G PS+ +T T +E +++ K + PP AS ANG I GY V YG + D P+ S+ N A +T L+ +T Y V V+AF G S +T + +P GPP V+ A S ++ ++W+ PE NG I+ Y + + + A K++ + + S + LNK + Y A+ +G+G S K+ +P
Sbjct: 15 GGDVLLLCPVSGYPIERIVWSKEGRELRGPRPTPLSNGTLLIQKVEAS--DATTYICVVQNRVGQ------RAQGKIHLLAIKAPKI----APF--HFAPDLKEDDRAQVVCSITSGDLPIQISWEKDGKVLEPDSNIQIQNNVFGSSLLFFRLKAQHSGFYKCIASNAAETTNFTSQLVVKV--PPS----------------------------------WLLAPKDIVTRHRSQVVLDCQASGNPRPTVSWRRAHSSSYSGNHISRDKDGSYYEYVQTSEPGRSFHPNGSLILHHVTPEDEGQYRCEVQNGVGAISKSVFVTVQVPVYFGTGSQNRTAVAGKDASLVCNALGNSPINLEWKTGLREKIGARMTSRYSIVEANSSGGVLSTLTIRSVRRSDSGEFICEAGNDFGTSSISIFLSVVESPEPPSSVHITELSSRSINLAWYPAYDGNSPVLQYIVQYKEGGVHWRYHHNKTVGGGESTGIKLGGLRPYTEYNMRVMSVNEVGAGDPSEVITAVTLQE-------------------------------------------------DIANYDYKAVFMYPPEASLANGRILGYYVRYGATDESLDEIRHQQHTNPNNGLISSSSPNLARMTVRGGRTQALVGDLRPFTKYQVYVVAFNEKGLSPHSTKTIVSTLEGVPSGPPLKVRCEAESSTSLSIAWRQPEVAHRNGIILGYKISYRLTNVVGQDAGKSDLIRTKKTSDDRISIHQLNKFSSYYVKXRAYXAVGDGYSSEKIICKTGADVPG 709 HSP 3 Score: 137.887 bits (346), Expect = 1.551e-32 Identity = 181/779 (23.23%), Postives = 296/779 (38.00%), Query Frame = 0
Query: 635 VAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKI----IDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILW------NMNNKRLDTNVDPRYTIREESQEDGML----STISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT-WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTT-EQDIPGPPSSVKALAMSEEAILVSWQYPEE---PNGKIIQYTVYIKELDRSRD---IAPKTNKVNALQMSHQ----------------VDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQP-IPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVT-HEL 1373
V+G + + CPV+GYPI + W K+GR+L R T NGTL I V+ DA+TY CV +N G A+ + + ++ P I PF F D + E D AQV+CSI+ GD P+ +I+W+K + + P D NI+I SL+ +K + G+Y C ASN + +++ V+ PPS+ + + VL C+A G + W + + + + D Y ++ E G ++ + ED + C N G+ S+ + +Q +G ++T K +++L + PI W + + + + +V N G G T+TI + + SG + G + + + + +PP+ V IT LSS++I + W P N + Y V Y W + +L L+ YT Y ++V++ G G SEV+T+ T ++DI KA+ M YP E NG+I+ Y V D S D TN N L S V +L +Y+ +V A G S K +S +P+ +K+ C A S + + W+ QP + + I S ++T V+ +D GK + K D ++ H+L
Sbjct: 13 VSGGDVLLLCPVSGYPIERIVWSKEGRELR-GPRPTPLSNGTLLIQKVE-ASDATTYICVVQNRVGQRAQGKIHLLAIKAPKIAPFHFAPD-LKEDDRAQVVCSITSGDLPI--------------------------------QISWEK---DGKVLEP------------DSNIQIQNNVFGSSLLFFRLKAQHSGFYKCIASNAAETTNFTSQLVVKVPPSWLLAPKDIVTRHRSQVVLDCQASGNPRPTVSWRRAHSSSYSGNHISRDKDGSYYEYVQTSEPGRSFHPNGSLILHHVTPEDEGQYRCEVQNGVGAISKSVFVTVQVP--VYFGTGSQNRTAVAGK---------DASLVCNALGNSPINLEWKTGLRE-------------KIGARMTSRYSIVEANSSG--GVLSTLTIRSVRRSDSG-----------EFICEAGNDFGTSSISIFLSVVESPEPPSSVHITELSSRSINLAWY--PAYDGNSPVLQYIVQYKEGGVHWRYHHNKTVGGGESTGIKLGGLRPYTEYNMRVMSVNEVGAGDPSEVITAVTLQEDIAN--YDYKAVFM----------YPPEASLANGRILGYYVRYGATDESLDEIRHQQHTNPNNGLISSSSPNLARMTVRGGRTQALVGDLRPFTKYQVYVVAFNEKGLSPHSTKTIVSTLEGVPS-------------GPPLKVRCEAESSTSLSIAWR---QPEVAHRNGIILGYKISYRLTNVVGQDAGKSDLIRTKKTSDDRISIHQL 674 HSP 4 Score: 87.0409 bits (214), Expect = 4.267e-17 Identity = 95/396 (23.99%), Postives = 156/396 (39.39%), Query Frame = 0
Query: 359 GGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETV--LTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNG---EPVGHTE-------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYG---------------GTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMK-VVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRN-----------GTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPP 715
GG++ + CP GYPI W K + L + GTL+I++ + D+ Y+C+V N VG + + L + AP + + R+ G+ + W K+G EP + + ++L +K + G Y+C N E+ T +L + PP ++ A + T+ V L C A G+P P V W S + S + +G Y+ S+ + G Y C+ + VG +S S + V Y + VAGK + C G ++ W K G + R T + TL I +V R+ D+ + C A ND G S+ S + ++V+E P
Sbjct: 15 GGDVLLLCPVSGYPIERIVWSKEGRELRGPRPTPLSN------GTLLIQKVEASDATTYICVVQNRVGQRAQGKIHLLAIKAPKIAPFHFAPDLKEDDRAQVVCSITSGDLPIQISWEKDGKVLEPDSNIQIQNNVFGSSLLFFRLKAQHSGFYKCIASNAAETTNFTSQLVVK---VPPSWLLAPKDIVTRHRSQVVLDCQASGNPRPTVSWRRAHSSSYSGNHIS----RDKDGSYYEYVQTSEPGRSFHPNGSLILHHVTPEDEGQYRCEVQNGVGAISKSVFVTVQVPVYFGTGSQNRTAVAGKDASLVCNALGNSPINLEW-KTGLREKIGARMTSRYSIVEANSSGGVLSTLTIRSV-RRSDSGEFICEAGNDFGTSSIS-IFLSVVESP 394 HSP 5 Score: 67.3958 bits (163), Expect = 4.091e-11 Identity = 94/436 (21.56%), Postives = 164/436 (37.61%), Query Frame = 0
Query: 446 PKQQVVDYGRSATFKCHYDGNPVKSVYWLKNG------EPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKC-VAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTW---------------EKDGRQLPFNDR----QTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPP 853
P+ + G C G P++ + W K G P + TL I V+ D Y C V+N + +A G++ L P+ A + + C + GD ++ W G E D +Q+ N S L + + ++ G Y+C AS+ + +++L V P + P +V + + C +G P +V+W +KDG + ++ + NG+L + +V ED Y C +N G ++S + VTV VP FG N A G DA + C A G + WK + + R T + Y +A++ + +L I+++++ + G ++C+A N G S ++V P
Sbjct: 7 PRNKXAVSGGDVLLLCPVSGYPIERIVWSKEGRELRGPRPTPLSNGTLLIQKVEASDATTYICVVQN-RVGQRAQGKIHLLA-IKAPKIAPFHFAPDLKEDDRAQVVCSITSGDLPIQISWEKDGKVLEPDSNIQI-----QNNVFGSSLLFFRLKAQHSGFYKCIASNAAETTNFTSQLVVK-VPPSWLLAPKDIVTRHRSQVVLDCQASGNPRPTVSWRRAHSSSYSGNHISRDKDGSYYEYVQTSEPGRSFHPNGSLILHHVT-PEDEGQYRCEVQNGVGAISKS-VFVTVQ-----VPVYFGTGSQNRTAVA-----------------------------GKDASLVCNALGNSPINLEWKTGLREKIGARMT-SRYSIVEANSSGGVL---STLTIRSVRRSDSGEFICEAGNDFGTSSISIFLSVVESP 394 HSP 6 Score: 57.3806 bits (137), Expect = 5.010e-8 Identity = 61/275 (22.18%), Postives = 100/275 (36.36%), Query Frame = 0
Query: 286 DGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD--------------RVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP-----------------VKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFV 529
DGK V+ P +QI+N ++ + +H + S A T L P S ++ + + C A G P P W + S+ + ++ D R G+LI+ +D G+Y C V N VG S +TV P+ + + G+ A+ C+ GN + S Y + G +TL I SV++ D G + C ND ++ + L + +PP V
Sbjct: 128 DGK-VLEPDSNIQIQNNVFGSSLLFFRLKAQHSGFYKCIASNAAETTNFTSQLVVKVPP-SWLLAPKDIVTRHRSQVVLDCQASGNPRPTVSWRRAHSSSYSGNHISRDKDGSYYEYVQTSEPGRSFHPNGSLILHHVTPEDEGQYRCEVQNGVGAISKSVFVTVQVPVYFGTGSQNRTAVAGKDASLVCNALGNSPINLEWKTGLREKIGARMTSRYSIVEANSSGGVLSTLTIRSVRRSDSGEFICEAGNDFGTSSISIFLSVVESPEPPSSV 400 HSP 7 Score: 54.6842 bits (130), Expect = 3.596e-7 Identity = 54/236 (22.88%), Postives = 94/236 (39.83%), Query Frame = 0
Query: 755 PTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG--GISAVAKIAVQAP--------PSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRL--DTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLK-VVDKTGRTVKLSWQAPYN 977
P +K G D + C G+P I W K RPTP + +G+L+I+ ++ + Y+C N +G + +A++AP P + R Q V+ G+ PI I W + K L D+N+ + Q + S++ R + + S + C+A+NA + + + L+++ P K +V + V L QA N
Sbjct: 7 PRNKXAVSGGDVLLLCPVSGYPIERIVWSKEGRELRGPRPTP---------------LSNGTLLIQKVEASDATTYICVVQNRVGQRAQGKIHLLAIKAPKIAPFHFAPDLKEDDRAQ--------VVCSITSGDLPIQISWEKDGKVLEPDSNI--------QIQNNVFGSSLLFFRLKAQHSGFYKCIASNAAETTNFTSQLVVKVPPSWLLAPKDIVTRHRSQVVLDCQASGN 211
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000004784 (supercontig:LSalAtl2s:LSalAtl2s251:1649217:1675387:-1 gene:EMLSAG00000004784 transcript:EMLSAT00000004784 description:"maker-LSalAtl2s251-snap-gene-17.6") HSP 1 Score: 319.701 bits (818), Expect = 4.852e-93 Identity = 219/681 (32.16%), Postives = 312/681 (45.81%), Query Frame = 0
Query: 912 MLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGT------------WANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPS--------KTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDR------SRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIR--QLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVV-----NG-PPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHH--QD----WTLVSNSVKAGGN--FVVLDLNPATWYNLRVTA 1549
M S + I R+DSALF C A+N FG SI L++QE PE P +V + R +SW PY+G S +T Y+IE+K KGT W H+ V G A + SL P+ +Y R+ A+N +GVSG + + + EE P GPP IR A SQ+I VTW +P +GVI GY + Y +T + E L LKKYT Y++ V A+ G G ++ + T++D+P PPS+ Y V+ + L RD+ K+ + + + Y FWVT T G+G S VT +P+ IPA IASF + +++ PCI++G P P + W G+ + + RI Q D SL IT + D+G Y CMV N +G D + L V NG PP PP +++ T +IT+ S + +P+ GY +H+ EFGDW+ I ++ FTL +L CG Y Y+ N GVG ++ ++A T+G P P F+ V++ S+ L L+AW GGCPI FVVEY+ QD W LV+N+VK + F VLDL+P T Y+L A
Sbjct: 1 MTSKLLIHNLHRDDSALFQCFASNQFGKAVRSIRLVVQEPPEVPNNPHIVSFSSRNANISWSKPYDGRSQITAYIIEYKMEKGTTYFLRFISLSESWREASKHI-VSGTSNWAELQSLAPSHAYEIRMSAENGVGVSGKTPILKLRAKEEIPEGPPTGIRAIAN-------------------------------------GSQSIIVTWRAPHPELRHGVILGYYLGYKVRNSSEPFRYQTLEMKHRHERRRKESLELILYHLKKYTEYSIVVQAYNGVGAGPRNPEIHIRTDEDVPSSPPSN--------------------------DYRVFYRPLREWEDNPLVRDLRTSGLKITLYDLDKYQNYTIQNQPYSFWVTCSTIEGQGLESEIVTETPSLPIPASIASFSQSMFGAINEEIFFPCISIGKPKPSISWTFNGEDLRPSSRILVDQTRDNSLWITALELSDSGNYSCMVKNHFGSDSILIYLTVKKSRNNGVPPAPPTLSVVQTTPSSITLGWXPS-ADGGSPLLGYRIHHHREFGDWDRTDINPLNNSFTLKNLRCGTHYQFYIQGVNDFGVGERTETVSARTRGTSPIAPFNEDFISVNSTSIVLKLDAWRMGGCPISSFVVEYRKSEKLLQDSSTSWILVNNNVKMTEDRTFAVLDLSPQTAYSLPTIA 616 HSP 2 Score: 63.5438 bits (153), Expect = 5.139e-10 Identity = 67/263 (25.48%), Postives = 103/263 (39.16%), Query Frame = 0
Query: 832 CKASNGIGGISAVAKIAVQAPPSFEIKKRTQTAL--ISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEK-----PETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTW-ANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGP------PVDIRVAAVDQHTLRMGQGPMSDEVL 1080
C G G S + P I +Q+ I+E C + G+ I W N + L P I + D +++ I + DS ++C+ N FGSD I L +++ P P L VV T ++ L W +G S L Y I G W D++ P + + + +LR T Y F + ND GV ++TV+ T +P P V+ + RMG P+S V+
Sbjct: 318 CSTIEGQGLESEIVTETPSLPIPASIASFSQSMFGAINEEIFFPCISIGKPKPSISWTFNGEDLR----PSSRILVDQTRD---NSLWITALELSDSGNYSCMVKNHFGSDSILIYLTVKKSRNNGVPPAPPTLSVVQTTPSSITLGWXPSADGGSPLLGYRIHHHREFGDWDRTDIN----PLNNSFT-LKNLRCGTHYQFYIQGVNDFGVGERTETVSARTRGTSPIAPFNEDFISVNSTSIVLKLDAWRMGGCPISSFVV 568
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000001266 (supercontig:LSalAtl2s:LSalAtl2s1208:7071:89755:-1 gene:EMLSAG00000001266 transcript:EMLSAT00000001266 description:"maker-LSalAtl2s1208-augustus-gene-0.12") HSP 1 Score: 299.286 bits (765), Expect = 2.830e-82 Identity = 342/1400 (24.43%), Postives = 554/1400 (39.57%), Query Frame = 0
Query: 246 VGNSALFKCEVP-SFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWY--KFMESNNNKKLVALDDRVK-QVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNG--------EPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKC-VAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKM-LPMKVVAGKSMFVTCPV--AGYPISSVTWEKDGRQL------PFNDRQTVYRN---GTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNN----LQMRPTPN-----------DYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRT---QTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIE-----------TAEEAPSGPP--------------------------VDIRVAAVD-----------QHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNK-------VNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPS----IKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNP-QLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGD-WNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAW--MDGGCPILYFVVEY-----------KPRHHQDWTLVSNSVK 1527
+G++A F C++P S ++ + + W+ + + D +++ E++IRNV +DG Y+C L+ + +G+L + + L P+ Q G +++ C A G P P+ +W F N + L+ V V L I + V D G Y C V N G + L + + P++ GR+ C G P+++V+W K+ V + T + + K+ D G Y+C N Q A G+ K+ P+ V + Q G +SL C +A+GD + W ++ ++ SF+S N S L I + GTY C A +K G +S + V+ P + + G V C + PI ++W KDG L +D Q + L ISN++ + + YTCVA N G A D +TV PPA W +P QG +K+ C+A+G P P+I+WKK + + L++ P N + D+ + I + +LII+ K + G YLC SNGIG + V+ PP R+ +AL + L CEA+G+KPI + W N+ +D N RY+ L TI+ +R G+K + LS P+ + + K I G +++ + + + LRP Y RV A+N +G S + +E ++ +P PP D+R + Q R G GP+S E T E P PP +I T ++S ++++TW+ P ++ I+G + Y + +Y N K S IPG P+ VK +S+ +ILVSW P+EPNG I+ YT+Y R R P T+ + V+ L + Y+FW+TA T GEG S +V + ++R I S + V V + + LPC +G P + W G + K+ ++ D L I + D G C++ D + + L V P PP + + S +++++++ ++ + +P+ G I+H+K ++G + T PF + FTL L CG Y LY T N+IG +S LT +T G +P+ + F+ S SV L L +W + GCP+ YFVV+Y K HH++ +NS +
Sbjct: 128 IGSNARFSCQIPDSRISQIEVGLRWLVNGVSPRD---------PRILVRGDEIEIRNVQQEDG-GIYQCF----LSLKGNEYQASGELRLGDSL----PRLQYAFIEQTLQP--GPMVSLKCSATGSPTPIIKWKLDGFDLPNLERYLIGQYVTVHGDVISHLNISRSLVIDGGLYSCSVINRAGSIIHQGRLNIYGAPMIRPWPEEIKAIEGRTFVLHCPLGGFPIEAVHWEKDNLLLASNLRRKVLNNGTLILSDVAKERDEGSYKCTGSNRQ-GLSAMGKTKIS-VIVSPKIVPFAAPASLQQGERISLTCTIARGDAPLTLSWVKNNRPLNNNVGQKIISFDSYN----SMLTIEALSLHHIGTYTCLARNKAGSAEYSQHITVHVPPEIEPFTFGDNLREGSRTRVVCGILRGDLPIR-LSWLKDGSHLLNGQSSGESDLQIASVDDFSSLLTISNLRYRLHSGVYTCVAENPAG-QATFDAPLTVKVPPA----------------------------------WKTKPWSTSSVQGESSKLYCQAEGSPAPKISWKKEIASQPGEFLEIIPPINSGIWIQSNKEKEGGGIDSLPTSDYGITNSTLIIERTSKSHAGRYLCLVSNGIGQDLHQFFNFTVKVPPRVTFPDRSFALNSALGDKMARLNCEAEGDKPITVTWMRQNEDIDVNSIVRYS----------LETIATER------------------------------------GVKTI--------LSIHVPWE--------LAKIKTINGR--KEIEEERMTKSEEQVRLDGLRPNIYYKVRVFAENSLGRGRSSSELRLEILKNEIVSPKLVSDHSPGLPPNNRLQEGPKSSGGDNYNWTTVERYDRSDLRTILRELIPNSKYEILIQAQNRYGFGPVSKES-GSTGEDLPLTPPRNIICTPMTSTSLQLTWAPPEVSD----IRGRLLGY---RLYYQ--DVNHKFS------------------------------------------IPGQPAKVKTFPLSDRSILVSWLPPQEPNGIIVSYTLYT----RIRTGTPSTHGEPKGGTPIRRTARHFVVNGLKQSFYYQFWITASTKYGEGVRSEIKGERVIANGSSR--PFIHSIGSEIVGEVGETISLPCHHMGPPRSVRRQWISNGIKLRKSSKM-SFEDECLDIHEIEHSDEGNXSCIIERPLSHDQIVYSLRVKRVPKPPLIELNSASSNSLSLSWTSNQDKIDSPILGAIIHHKRKYGAPYETIIPPFYN--FTLSHLNCGTEYTLYSTLFNAIGSSDQSNTLTVSTTGTKPSSSKNGAFIFPSNDSVRLDLYSWDVENEGCPVRYFVVDYRQSSALSLQDSKSNHHZNSPRKNNSTQ 1340 HSP 2 Score: 241.121 bits (614), Expect = 3.408e-64 Identity = 189/646 (29.26%), Postives = 279/646 (43.19%), Query Frame = 0
Query: 358 QGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQ-----VGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTV-----TAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSV----YWLKNGEPVGHTETTLR-----INSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKM-LPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQ----DFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCE-AKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQ-REDSALFTCVATNAFGSDDTSINLIIQEKPE---TPYGLKVVDKTGRTVKLSWQA 974
+G + C + G P P W+K N+ L L + G L I + DSG Y C+ N VG S L V ++P + V P Q D G +A F C + + + WL NG +R I +V++ED G+YQCF+ QA+GEL+LG P AF T QPGPMVSLKC A G P P +KW + G + + +G + + +GDV+S+LNIS++ GG Y C ++ G + H +LN+ GAP +R +K + G++ + CP+ G+PI +V WEKD L N R+ V NGTL +S+V ++ D +Y C N +G SA ++V+ P IVPF+ + +G+ + C+I+RGD PL ++W K NN RP N+ FD+ N L I+ + + G Y C A N G I V PP E T + C +G+ PI + W + L + + + D S ++I + R S ++TCVA N G L ++ P P+ V G + KL QA
Sbjct: 27 EGQGAILPCFSSGSPPPFTSWFK----ENHHLLDPLPSSPQYHLFGPRGSALKIYRLQSSDSGIYRCVARNDVGESSFSIHLKVYSQGESSPPDLRVLPDIQSADIGSNARFSCQIPDSRISQIEVGLRWLVNGVSPRDPRILVRGDEIEIRNVQQEDGGIYQCFLSLKGNEYQASGELRLGDSL--PRLQYAFIEQTLQPGPMVSLKCSATGSPTPIIKWKLDGFDLPNLERYLIGQYVTVHGDVISHLNISRSLVIDGGLYSCSVINRAGSIIHQGRLNIYGAPMIRPWPEEIKAIEGRTFVLHCPLGGFPIEAVHWEKDNLLLASNLRRKVLNNGTLILSDVAKERDEGSYKCTGSNRQGLSAMGKTKISVIVSPKIVPFA-APASLQQGERISLTCTIARGDAPL--------------------------------TLSWVK---NN---RPLNNNVGQKIISFDSYNSM--------LTIEALSLHHIGTYTCLARNKAGSAEYSQHITVHVPPEIEPFTFGDNLREGSRTRVVCGILRGDLPIRLSWLKDGSHLLNGQSSGESDLQIASVDDFSSLLTISNLRYRLHSGVYTCVAENPAGQATFDAPLTVKVPPAWKTKPWSTSSVQ--GESSKLYCQA 617 HSP 3 Score: 62.7734 bits (151), Expect = 1.111e-9 Identity = 119/535 (22.24%), Postives = 199/535 (37.20%), Query Frame = 0
Query: 188 EYVILGNDALMKCSIP-SFVADQ-LEVVSWHGSDGSEIRPGQIHV----VYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCP-AQGYPIPVFRWYKF---MESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCH-YDGNPVKSVYWLKNGEPV----GHTETTLRINSVK-------------KEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKW----------FI-------------YGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHS-AKLNVNGAPYV----RKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFN 666
+YV + D + +I S V D L S GS I G++++ + +P+ +E I G + + C + F ++ V W + SN K VL +G L + +V+ + +YKC +R G + + T ++++ PK ++ Q QG I++TC A+G W K + +N +K+++ D L I+ + G Y C+ N G +TV P +E + G C G+ + WLK+G + E+ L+I SV + G+Y C N + QAT + L + PP + + + ++ G L C A+G PAP++ W F+ E E G+ + + SD G S L I + + G Y C S+ +G H V P V R + K + C G +VTW + + N
Sbjct: 258 QYVTVHGDVISHLNISRSLVIDGGLYSCSVINRAGSIIHQGRLNIYGAPMIRPWPEEIK---AIEGRTFVLHCPLGGFP---IEAVHWEKD-----NLLLASNLRRK--VLNNGTLILSDVAKERDEGSYKCTGSNR-QGLSAMGKTKISVIVS-------PKIVPFAAPASLQ--QGERISLTCTIARGDAPLTLSWVKNNRPLNNNVGQKIISFDS----YNSMLTIEALSLHHIGTYTCLARNKAGSAEYSQHITVHVPPEIEPFTFGDNLREGSRTRVVCGILRGDLPIRLSWLKDGSHLLNGQSSGESDLQIASVDDFSSLLTISNLRYRLHSGVYTCVAEN--PAGQATFDAPLTVKV-PPAWKTKPWSTSSVQGESSKLYCQAEGSPAPKISWKKEIASQPGEFLEIIPPINSGIWIQSNKEKEGGGIDSLPT--SDYGITNSTLIIERTSKSHAGRYLCLVSNGIGQDLHQFFNFTVKVPPRVTFPDRSFALNSALGDKMARLNCEAEGDKPITVTWMRQNEDIDVN 760
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000003651 (supercontig:LSalAtl2s:LSalAtl2s199:289252:321784:1 gene:EMLSAG00000003651 transcript:EMLSAT00000003651 description:"maker-LSalAtl2s199-augustus-gene-4.25") HSP 1 Score: 228.794 bits (582), Expect = 3.813e-66 Identity = 130/381 (34.12%), Postives = 206/381 (54.07%), Query Frame = 0
Query: 264 VDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEP--------VGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGV--------------LQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNG 622
V++V W + S + G+Y++ G+L IR+VS DG YKC+ + +TG T+ S++ G +++TEP G + S F QG + + C AQG+P+P F W K + ++++ + L + A+ ++G+Y+C + N G VE ++ V +PL V + P+ VVD+G++A F C G P+ ++ WLK G+P + + +L I++V ++DR YQC N+ + AQ T EL LG PPEF S F+ T +PGP VSLKCVA G+P PE+ WF+ E S V L +G + S +G V+S+LNIS +++ GG Y+C+A + VG + H + LN+ G
Sbjct: 5 VNVVAWWKEDTLSSTSPVEVHSGGRYLLTSLGDLHIRDVSSADGHMKYKCQIRDIVTGRTQYSSS-GHVIVTEP--QGDVLKQPEIPDSMFIVQQGEALDLPCVAQGFPVPSFLWMKVNPESGREEVLTATPTLFPRHSVLSLVGARNHNAGRYICQIENRSGRYKVEHIVEVVSPLHVSMSPQHLVVDHGQTALFNCSVSGFPIANLIWLKGGDPLDTSSNPRIKSSGNSLYISNVSRKDRDSYQCVASNENDVAQGTAELVLGAV--PPEFHSIFNEQTLRPGPKVSLKCVASGNPPPEISWFL-DDEHLSVAVNQRKDSSYRHLRDRLVIGQYLSPSGLVISHLNISDVQSEDGGYYKCRAQNAVGFIEHQSSLNIYG 379 HSP 2 Score: 87.0409 bits (214), Expect = 5.897e-18 Identity = 96/378 (25.40%), Postives = 151/378 (39.95%), Query Frame = 0
Query: 487 LRINSVKKEDRGM-YQCFVRN---DQESAQATGELKL----GGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGL--VSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNG-TLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIID----------GSLIIKNIKKGNEGYYLCKASNGIGGI 841
L I V D M Y+C +R+ + ++G + + G PE + V Q G + L CVA+G P P W E+ + VL V+S + AR G Y CQ ++ G V H ++ +P M P +V G++ C V+G+PI+++ W K G L + + +G +L ISNV RK D +Y CVA N+ + + V PP +F + +E LRP G + C A G P PEI+W +++ + N +D + R+ +I L I +++ + GYY C+A N +G I
Sbjct: 38 LHIRDVSSADGHMKYKCQIRDIVTGRTQYSSSGHVIVTEPQGDVLKQPEIPDSMFIV--QQGEALDLPCVAQGFPVPSFLWMKVNPESGREEVLTATPTLFPRHSVLSLVG---ARNHNAGRYICQIENRSGRYKVEHIVEVV---SPLHVSMSPQHLVVDHGQTALFNCSVSGFPIANLIWLKGGDPLDTSSNPRIKSSGNSLYISNVSRK-DRDSYQCVASNENDVAQGTAELVLGAVPP---------------EFHSIF------NEQTLRP-------------GPKVSLKCVASGNPPPEISW---FLDDEHLSVAVNQRKDSSYRHLRDRLVIGQYLSPSGLVISHLNISDVQSEDGGYYKCRAQNAVGFI 369 HSP 3 Score: 68.1662 bits (165), Expect = 9.366e-12 Identity = 72/323 (22.29%), Postives = 112/323 (34.67%), Query Frame = 0
Query: 634 VVAGKSMFVTCPVAGYPISSVTWEK----DGRQLPFNDRQTVY-RNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQA-PPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGM------------LSTISIKRTQREDSALFTCVATNAFG 938
V G+++ + C G+P+ S W K GR+ T++ R+ L++ R +A Y C N G + + V V+ P + ++ P G A +C GFP + W K D S++ IK SL I N+ + + Y C ASN A++ + A PP F QT L+C A G P I W ++++ L V+ R D + +S ++I Q ED + C A NA G
Sbjct: 94 VQQGEALDLPCVAQGFPVPSFLWMKVNPESGREEVLTATPTLFPRHSVLSLVGA-RNHNAGRYICQIENRSG-RYKVEHIVEVVSPLHV----------------------------------SMSPQHLVVDHGQTALFNCSVSGFPIANLIWLKG-------------GDPLDTSSNPRIKSSGNSLYISNVSRKDRDSYQCVASNENDVAQGTAELVLGAVPPEFHSIFNEQTLRPGPKVSLKCVASGNPPPEISWFLDDEHLSVAVNQRKDSSYRHLRDRLVIGQYLSPSGLVISHLNISDVQSEDGGYYKCRAQNAVG 367
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000005066 (supercontig:LSalAtl2s:LSalAtl2s266:205294:402426:1 gene:EMLSAG00000005066 transcript:EMLSAT00000005066 description:"maker-LSalAtl2s266-augustus-gene-3.8") HSP 1 Score: 197.208 bits (500), Expect = 7.683e-51 Identity = 223/903 (24.70%), Postives = 371/903 (41.09%), Query Frame = 0
Query: 445 EPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRI-------------NSVKKEDRGMYQCFVRNDQESAQA------TGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVA-KGDPAPEVKWFIYGS---EAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLV-SHSAKLNVNGAPY-VRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQA-----PPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINL---------IIQEK-------PETPYGLKVVDKTGRTVKLSWQ-APYNGNSNLTRYVIEFKPIKGTWANDVDH-VLVPGDQTMAGVFS---LRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVI-ITTLSSQAIKVTWSSPP--LASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAE--LTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQ--YPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEG---SPSIKVTLSPTN 1285
+P V T C DG P ++ W K+GE V T R+ + K+ D G+Y C N+ +A++ L+ R +P + + A G + +KC KG+P P VKW G ++S+G + + ++ G++V I + G CQA + VG+ + A+L++ PY + K L + ++G + + C V+G P V W +D LP N + L I +V R ED Y C A+ND GY + +++V PAI +P D++ AK +C A G P P + W K L T Y S D G+L I+ ++K +EG+Y+C A + G + A + V A PP + QT ++ +L C+A G I W N + ++D I ES T+ I D+ L+TC A++ G S +L +I K P+ P K+VD+ ++ +SW+ +P G S L Y +E+ +++D++ +V ++ + ++ L+P TSY F V A+N G+S P+ V + + +D + +H A ++ I +SS I+V+WS P ++ G Y+ + G S+ + + + + TD +T+L+KYT Y V ++ F +G S L T +D+P PPS + M+ + ++ W P+ NG ++ Y +++K +NA S+ + NL +Y A T IG G PS V + PTN
Sbjct: 34 QPTSMTVPKNEPVTLNCKADGIPEPNITWYKDGELVPTAPKTHRVILPSGSLFFLRAVQNKKEHDGGLYWCEATNEVGTARSRNVTLDVAVLREDFRLNPMDTIVA-------EGDIGVIKCWPPKGNPKPSVKWTKNGDILDTSQSNGRIII----TEVGNLV----IQEVVKSDEGQXACQAENIVGIRETEEAQLSIQVKPYFLSKPLDITAISGDDIDIICDVSGDPDPIVIWSRDDGPLPEN--KVSIDANRLQIRDV-RPEDDGIYFCKAKNDVGY-VEASFSISVHAKPAI----------------------------------QTKPKDQRIGMNGIAKFECSAGGNPPPSLFWTKEGSQELMFAGT--KYGQRSVSED-------GTLFIQGVRKEDEGFYICSALSVAGSTATKAYLEVTALRDTPPPIIIMGTANQTLPLNTIAILPCKASGAPKPTISWYKNQSPI--SIDDSSRILVESS-----GTLVIDNLISSDTGLYTCTASSESGETSWSASLSXXDPKNPNVIFHKTPDPSTFPDPPTRPKIVDRRSTSITISWRRSPNTGESPLMGYTLEY------FSSDLETGWVVAANRITSETYTINNLKPDTSYMFLVRAENSHGMSPPT----------------------RVSERVRTLQSLSENDGINIHEVSNALMSKVVQLTSIEAISSTTIRVSWSILPESMSYVEGFFVRYRDMSGGSQKF---NMKTVMLETDGIVNHVITNLRKYTEYEVFLMPFYKKIEGQPSNSLHVQTMEDVPSAPPSDLLIEPMNSTSAIIRWSPPPPQHRNGVLLGYQIHVK--GNGSTFHSNITTLNATTTSYILSNLTLHQKYSVRAVARTKIGLGPFSQPSFFV-MDPTN 833 HSP 2 Score: 106.301 bits (264), Expect = 5.971e-23 Identity = 184/807 (22.80%), Postives = 293/807 (36.31%), Query Frame = 0
Query: 535 VTTQPGPM-------VSLKCVAKGDPAPEVKWFIYG-----SEAESDGVLQVGSFNSDNGDVVSYLNISQARTKY-GGTYECQASSKVGLV-SHSAKLNVNGAPYVRKMLPMK--VVAGKSMFVTC-PVAGYPISSVTWEKDGRQLPF---NDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQA--PYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPT--QPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT---WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEV------LTSTTEQDIPGPPSSVKAL-----------AMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQ--------MSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPA 1289
+T QP M V+L C A G P P + W+ G + +L GS + +L Q + ++ GG Y C+A+++VG S + L+V ++ PM V G + C P G P SV W K+G L N R + G L I V K D C A N G I E + AQ+ + +P + +P D G D I C G P P + W + P P + DA+ L I++++ ++G Y CKA N +G + A I+V A P+ + K + Q ++ +C A G P + W + +Y R S EDG T+ I+ ++ED + C A + GS T L + +TP + ++ +T+ L+ A P + + +K +D +LV T+ + +D G+ + T + E+ E + S ++ D P + V+ H T PP I S +I ++W P + + GY + Y S W + R T + +LK T+Y V A + G + V L S +E D AL A+S I VSW E + + V R RD++ + K N ++H + NL K YE ++ EG PS + + +P+
Sbjct: 31 ITEQPTSMTVPKNEPVTLNCKADGIPEPNITWYKDGELVPTAPKTHRVILPSGS--------LFFLRAVQNKKEHDGGLYWCEATNEVGTARSRNVTLDVAVLREDFRLNPMDTIVAEGDIGVIKCWPPKGNPKPSVKWTKNGDILDTSQSNGRIIITEVGNLVIQEVV-KSDEGQXACQAENIVG--------------------------IRETEEAQLSIQV--------KPYFLSKPLDITAISGDDIDIICDVSGDPDPIVIWSR------DDGPLPENKVSIDANR----------LQIRDVRPEDDGIYFCKAKNDVGYVEASFSISVHAKPAIQTKPKDQRIGMNGIAKFECSAGGNPPPSLFWTKEGSQELMFAGTKYGQRSVS-EDG---TLFIQGVRKEDEGFYICSALSVAGSTATKAYLEVTALRDTPPPIIIMGTANQTLPLNTIAILPCKASGAPKPTISWYKNQSPISIDDSSRILVESSGTLV------------IDNLISSDTGLY--TCTASSESGETSWSA-----SLSXXD---------PKNPNVIFHKTPDPSTFPDPPTRPKIVDRRSTSITISWRRSP-NTGESPLMGYTLEYFSSDLETGWVVAANR----ITSETYTINNLKPDTSYMFLVRAENSHGMSPPTRVSERVRTLQSLSENDGINIHEVSNALMSKVVQLTSIEAISSTTIRVSWSILPESMSYVEGFFV------RYRDMSGGSQKFNMKTVMLETDGIVNHVITNLRKYTEYEVFLMPFYKKIEGQPSNSLHVQTMEDVPS 735 HSP 3 Score: 94.7449 bits (234), Expect = 1.862e-19 Identity = 103/410 (25.12%), Postives = 167/410 (40.73%), Query Frame = 0
Query: 228 IHVVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKH----RLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKN------------GEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFD-PPEFVSAFDAVTTQPGPMVS-LKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLN 619
+ V+ + ++ + V G+ + KC P + V W + G D SQ +G+ ++ G L I+ V D + C+ ++ R T E +LS +++PL I +S G +I + C G P P+ W S ++ L +++V L I++ + +D G Y C N VG ++V A +++ +PK Q + A F+C GNP S++W K G+ + TL I V+KED G Y C + S L++ D PP + A T P ++ L C A G P P + W+ S D ++ +G +V I + G Y C ASS+ G S SA L+
Sbjct: 122 VAVLREDFRLNPMDTIVAEGDIGVIKCWPPK--GNPKPSVKWTKN-GDILDTSQS---NGRIIITEVGNLVIQEVVKSDEGQX-ACQAENIVGIRETEEAQLSIQVKPYFLSKPL--------DITAIS------GDDIDIICDVSGDPDPIVIW-----SRDDGPLP--ENKVSIDANRLQIRDVRPEDDGIYFCKAKNDVGYVEASFSISVHAKPAIQTKPKDQRIGMNGIAKFECSAGGNPPPSLFWTKEGSQELMFAGTKYGQRSVSEDGTLFIQGVRKEDEGFYICSALSVAGSTATKAYLEVTALRDTPPPIIIMGTANQTLPLNTIAILPCKASGAPKPTISWYKNQSPISIDDSSRI--LVESSGTLV----IDNLISSDTGLYTCTASSESGETSWSASLS 497 HSP 4 Score: 93.2041 bits (230), Expect = 5.775e-19 Identity = 129/564 (22.87%), Postives = 207/564 (36.70%), Query Frame = 0
Query: 28 IQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGL-RKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDV-LFKCKIPS-------YVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIHVVYQPY-QQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSP-DDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYK-------FMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA-----PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVG---------HTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKW 559
I E P M + C++ G P P ITW K DG +V P R ++ +G+L RA +E Y C A N +G +SR+V + V + M+ ++ D+ + KC P T +LD +S+G + T +VIQ V+ ++ C + V + E Q+ + +PY + + I G+ C+V D +V W +G + V + + LQIR+V P DDG Y C+ K+ + + A+ V +P KPK I G C A G P P W K F + ++ V+ D GTL I+ + +D G Y+C + G + + L VTA P + + Q + A C G P ++ W KN P+ + TL I+++ D G+Y C ++ + L +P +T P P K V + + + W
Sbjct: 31 ITEQPTSMTVPKNEPVTLNCKADGIPEPNITWYK-DGELVPTAPKTHRVILPSGSLFF--LRAVQNKKEHDGGLYWCEATNEVGTARSRNVTLDVAVLREDFRLNPMDTIVAEGDIGVIKCWPPKGNPKPSVKWTKNGDILDTSQSNGRIIITEVGNLVIQE---------VVKSDEGQXACQAENIVGIR------------ETEEAQLSIQVKPYFLSKPLDITAISGDDIDIICDVS---GDPDPIVIWSRDDGPLPENK---------VSIDANRLQIRDVRPEDDGI--YFCKAKNDV---GYVEASFSISVHAKPAIQTKPKDQRI--------GMNGIAKFECSAGGNPPPSLFWTKEGSQELMFAGTKYGQRSVSED-------GTLFIQGVRKEDEGFYICSALSVAGSTATKAYLEVTALRDTPPPIIIMGTANQTLPLNTIAILPCKASGAPKPTISWYKNQSPISIDDSSRILVESSGTLVIDNLISSDTGLYTCTASSESGETSWSASLSXXDPKNPNVIFHKTPDPSTFPDPPTRPKIVDRRSTSITISW 538 HSP 5 Score: 66.2402 bits (160), Expect = 8.862e-11 Identity = 51/175 (29.14%), Postives = 77/175 (44.00%), Query Frame = 0
Query: 1308 LPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPD--GSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGP----------------PDPP-EVTITSQTTDTITVKLKTSNPEDKTPVHGYILHY---KPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGP 1460
LPC A G+P P + W PI +D R L + G+L I ++ DTG Y C +++ G+ + L P PDPP I + + +IT+ + S ++P+ GY L Y E G W A S+ +T+++L Y V A NS G+ P
Sbjct: 429 LPCKASGAPKPTISWYKNQSPISIDDSSRILVESSGTLVIDNLISSDTGLYTCTASSESGETSWSASLSXXDPKNPNVIFHKTPDPSTFPDPPTRPKIVDRRSTSITISWRRSPNTGESPLMGYTLEYFSSDLETG-WVVAANRITSETYTINNLKPDTSYMFLVRAENSHGMSP 602
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000005332 (supercontig:LSalAtl2s:LSalAtl2s286:372665:491805:1 gene:EMLSAG00000005332 transcript:EMLSAT00000005332 description:"augustus_masked-LSalAtl2s286-processed-gene-3.1") HSP 1 Score: 185.267 bits (469), Expect = 5.416e-50 Identity = 110/316 (34.81%), Postives = 169/316 (53.48%), Query Frame = 0
Query: 259 FVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVF--RWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEP------VGHTET---TLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYG 563
FV+D L W+ EGT+ + + GKY +L SG L + + S D +K Y C+T+H LTG K S+ ++++T+P PK +TQ I + I F RW+K + + V R + L++ + + D+G Y+C++NN+ +E LTV +PL + P QQ+VD R + F C G+P++S+ WLKNGEP + ++++ TL I SV++ D G+YQC ++N+ + AQATG L+LG P + F T QPGP VSLKC+ KG+P P +KW + G
Sbjct: 162 FVSDNGTLT-WVHEEGTAIEIFPRKDPRGKYTLLQSGALLVHHTSSYDTYKKYICKTEHTLTGLRKRSSAEARIILTDPKGPVIPKVIE-------PRTQQLEIR-------HWIDSFNSRWFK--KDATGLRQVIPSTRFQFHLEVLVVHQISISDAGLYVCVMNNTSETRRIEVSLTVYSPLESRIHPMQQIVDLNRPSFFSCTTSGSPIQSLVWLKNGEPLEDKSGIRYSKSENGTLIILSVQEGDEGLYQCVIQNELDFAQATGSLQLGDAL--PVLLYKFSEQTLQPGPTVSLKCIGKGNPPPRIKWLLDG 458
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000004785 (supercontig:LSalAtl2s:LSalAtl2s251:1742083:1751026:-1 gene:EMLSAG00000004785 transcript:EMLSAT00000004785 description:"maker-LSalAtl2s251-augustus-gene-18.7") HSP 1 Score: 165.622 bits (418), Expect = 3.272e-44 Identity = 93/293 (31.74%), Postives = 144/293 (49.15%), Query Frame = 0
Query: 402 GTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV----------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGD--VVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDG--RQLPFNDRQTVYRNGTLAIS 680
GT++I GK+ C +NS G ES + LTV PLS+ + P Q VD G+ +C Y G P+K VYW+K+G + G +TLRI+S+ + D+G+YQCFV + + + +QPG +S+ C A G P P + WF+ G S G FN G +S L+IS GG Y C A +++G ++H +++V G P+++ M P+ V+A + + CP GYPI V W K+ + PF+ + + G + +S
Sbjct: 60 GTILITRVSTSHGGKWTCKASNSRGYESSDVHLTVQTPLSLRLYPPAQRVDVGKEVRIECAYRGFPLKDVYWVKDGVQLTLFPRGEIHKGDNVSTLRIHSMDRRDKGLYQCFVEGESQ-------------------------ILSQPGSSLSISCKATGSPLPSISWFVDGRPIYS------GVFNKTLGKDVFLSTLDISSISASEGGHYSCVAENELGFMTHGQRVDVYGPPFIKPMDPLSVLAASDVLIHCPYTGYPILQVKWTKNVPPKIEPFHFKDDLQVGGRIRVS 321 HSP 2 Score: 69.3218 bits (168), Expect = 3.743e-12 Identity = 93/378 (24.60%), Postives = 146/378 (38.62%), Query Frame = 0
Query: 483 TETTLRINSVKKEDRGMYQCFVRN----DQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSF---NSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQL---PFNDR--QTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWT------VEPTDKQ--FAQGSDAKIDCKADGFPKP-EITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDG---SLIIKNIKKGNEGYYLCKASN 836
TE T+ I V G + C N + T + L R PP A G V ++C +G P +V W DGV Q+ F GD VS L I + G Y+C + ++S G S+ ++C G P+ S++W DGR + FN + V+ + TL IS++ E Y+CVA N+ G+ V V PP I P D ++ + V+ P+L+ +WT +EP + G ++ C A P + W + N+ ++ + + SN +I +D SL+I + G+ G + C ASN
Sbjct: 58 TEGTILITRVSTSHGGKWTCKASNSRGYESSDVHLTVQTPLSLRLYPP-------AQRVDVGKEVRIECAYRGFPLKDVYWV-------KDGV-QLTLFPRGEIHKGDNVSTLRIHSMDRRDKGLYQCFVEGESQILSQ---------------------PGSSLSISCKATGSPLPSISWFVDGRPIYSGVFNKTLGKDVFLS-TLDISSISASEGGH-YSCVAENELGFMTHGQ-RVDVYGPPFIKPM----DPLSVLAASDVLIHCPYTGYPILQVKWTKNVPPKIEPFHFKDDLQVGGRIRVSCTASLGDLPIKFEW---LFNSHRL-------LEGEHSNGISITTVDAFSSSLVIPKLSTGHSGNFTCVASN 382
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|81916020|sp|Q8VHZ8.1|DSCAM_RAT (RecName: Full=Down syndrome cell adhesion molecule homolog; Flags: Precursor) HSP 1 Score: 654.055 bits (1686), Expect = 0.000e+0 Identity = 453/1513 (29.94%), Postives = 706/1513 (46.66%), Query Frame = 0
Query: 222 EIRPGQIH---VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDG-KYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGG-NIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRN-GTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPF-----SFGKDV-------------------------------INEGDFAQVM---------------------CSISRGDEPLLR--PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNL-QMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGG-ISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQ---------NDIGVSG---------------PSDTVTIETAEEAP--------------------SGPPVDIRVAAVD-----------------------QHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVY--------IKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPK----NDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFGD-WNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPV 1575
+IR +H V+ +PY ++ + GN A+FKC +PS V V +V W ++ S G ++++ +G L I++V +DG Y+C T+HR TGET+ S +A +L +++P A+ P SI+ +K G + + C A G+P P +RW K +N L L R ++ L+I+ ++ DSG Y+C V+N G V L V PL + P++ G + C GN + + W +NGE + G L ++ + K D G YQCFVR D+ SAQ ++ L P+ +SAF P VSL C KG P P V W + ++ + G+VVSYLNIS ++ + GG Y C A++ G+V + A++NV G +R M + +AG+ ++ C V GYP S+ W K+ LPFN RQ + N GTL +S+VQ++ D YTC S + VTV PP I PF S G+ V I+ DF + ++ + ++R P++ V+P D+ G ++C A+G+P P I WK + + Q +P A N R + +GSL+IK++ + + GYYLCK SN +G +S + V+ P T A + + C A GEKPI + W ++ ++ + RY + + + ++ST+ I T REDS F+C A N++G D I L +QE P+ P +++ D RT+ L W ++GNS +T Y IE K +W + V A + + P+++Y R+ A+ N+I ++ P+ + +I +AP +G + ++D Q R G GP S E++ T E P+ PP V S ++I ++WS+ + NG+++G++V+Y + + +T EL L+KYTNY++QVLAFT GDGV+SE + + T++D+PGPP+ VKA A S + VSW P + NG I +YTV+ I E + S D S+++ NL++ +Y WV A T+ G G+ S +T+ P + PA+I +F +D+ LPC AVG P+P + W P + R +GS I V ED+G Y C+ NN +G D + L V PPD P +T++ T+ +IT+ P D + + GYIL Y + + W + I + L++L CG Y +TA N +G G S + A T G EP E F ++ V L+L W DGGCPI F +EY+P WT + ++++ DL ATWY L++ N+AG + + FATL G TI P+
Sbjct: 110 KIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSW--------EKDTVSLVSGSRFLITSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQSNSA-RLFVSDP-ANSAP---SILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLK-----DNMPL-ELSGRFQKTVTGLLIENSRPSDSGSYVCEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLED--GTPKIISAFSEKVVSPAEPVSLVCNVKGTPLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPI--------ALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQRKEMSCTAHGEKPIIVRWEKEDRIINPEM-ARYLVSTKEVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPP-EIEIKDVKARTITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNEITITADEAAPDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLIDGELGEIKNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPD-----------SFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGSFVIRTVKAEDSGYYSCVANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWL---PGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWT-TAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQANFATLNYDGSTIPPL 1576 HSP 2 Score: 109.768 bits (273), Expect = 1.802e-22 Identity = 68/191 (35.60%), Postives = 97/191 (50.79%), Query Frame = 0
Query: 10 WCCGILLFAQSDTNGPVFIQEPPNQMDFSN----------TTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYV 190
W + LF QS N VF +EP + + F N T+GT + C + G P + W G + DVPG+R V NG L + PF ++ +H TY C AEN GK++S+DV ++AV+ + Y V VE + + GN +FKC IPS V V V+ W E SL + F++ T G Y+
Sbjct: 2 WILALSLF-QSFAN--VFSEEPHSSLYFVNASLQEVVFASTSGTLVPCPAAGIPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSW-EKDTVSLVSGSRFLI-----TSTGALYI 183 HSP 3 Score: 91.6633 bits (226), Expect = 7.043e-17 Identity = 151/620 (24.35%), Postives = 231/620 (37.26%), Query Frame = 0
Query: 354 FQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQV--------GGTLII------KEAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKN------GEPVGHTET-TLRINSVKKEDRGMY--QCFVRNDQESAQATGELKLG--GRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTWEKDGRQL-PFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQRE-DSALFTC 931
F T G V CPA G P RWY +A + + V GTL I + + Y C N G + V + P +V VE ++ + G A FKC + V V W K+ G T T L I V+ ED G+Y +C R+ + TGE + R DP P + FD G V L C A G P P+ +W E G Q V+ L I +R G+Y C+ S++ G +L V P + P KV + G + ++C V G ++W ++G L P + + N I + K D Y C R D+ SA+ + V + + + +F + V++ + ++C++ PL WT++ D +GS +I IT + VV+ L + + ++ DG G Y C A+N G + A+I V+ P S K TA+ +T + C G I W N L N R+ + E+ T+ + Q+E D +TC
Sbjct: 36 FASTSG--TLVPCPAAGIPPVTLRWY-----------LATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTM--RGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNED-GLYNYRCITRH-----RYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQ---------KTVTGLLIENSRPSDSGSYVCEVSNRYGTAKVIGRLYVK-QPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDK-LSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVSLVCNVK--GTPLPTVTWTLD--DDPILKGSGHRIS--------QMITSEGNVVSYLNISSS---------------QVRDG------------GVYRCTANNSAGVVLYQARINVRGPASIRPMKNI-TAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNH------RQVAFENN--GTLKLSDVQKEVDEGEYTC 575
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|81917376|sp|Q9ERC8.1|DSCAM_MOUSE (RecName: Full=Down syndrome cell adhesion molecule homolog; Flags: Precursor) HSP 1 Score: 654.055 bits (1686), Expect = 0.000e+0 Identity = 453/1513 (29.94%), Postives = 706/1513 (46.66%), Query Frame = 0
Query: 222 EIRPGQIH---VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDG-KYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGG-NIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRN-GTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPF-----SFGKDV-------------------------------INEGDFAQVM---------------------CSISRGDEPLLR--PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNL-QMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGG-ISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQ---------NDIGVSG---------------PSDTVTIETAEEAP--------------------SGPPVDIRVAAVD-----------------------QHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVY--------IKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPK----NDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFGD-WNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPV 1575
+IR +H V+ +PY ++ + GN A+FKC +PS V V +V W ++ S G ++++ +G L I++V +DG Y+C T+HR TGET+ S +A +L +++P A+ P SI+ +K G + + C A G+P P +RW K +N L L R ++ L+I+ ++ DSG Y+C V+N G V L V PL + P++ G + C GN + + W +NGE + G L ++ + K D G YQCFVR D+ SAQ ++ L P+ +SAF P VSL C KG P P V W + ++ + G+VVSYLNIS ++ + GG Y C A++ G+V + A++NV G +R M + +AG+ ++ C V GYP S+ W K+ LPFN RQ + N GTL +S+VQ++ D YTC S + VTV PP I PF S G+ V I+ DF + ++ + ++R P++ V+P D+ G ++C A+G+P P I WK + + Q +P A N R + +GSL+IK++ + + GYYLCK SN +G +S + V+ P T A + + C A GEKPI + W ++ ++ + RY + + + ++ST+ I T REDS F+C A N++G D I L +QE P+ P +++ D RT+ L W ++GNS +T Y IE K +W + V A + + P+++Y R+ A+ N+I ++ P+ + +I +AP +G + ++D Q R G GP S E++ T E P+ PP V S ++I ++WS+ + NG+++G++V+Y + + +T EL L+KYTNY++QVLAFT GDGV+SE + + T++D+PGPP+ VKA A S + VSW P + NG I +YTV+ I E + S D S+++ NL++ +Y WV A T+ G G+ S +T+ P + PA+I +F +D+ LPC AVG P+P + W P + R +GS I V ED+G Y C+ NN +G D + L V PPD P +T++ T+ +IT+ P D + + GYIL Y + + W + I + L++L CG Y +TA N +G G S + A T G EP E F ++ V L+L W DGGCPI F +EY+P WT + ++++ DL ATWY L++ N+AG + + FATL G TI P+
Sbjct: 110 KIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSW--------EKDTVSLVSGSRFLITSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQSNSA-RLFVSDP-ANSAP---SILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLK-----DNMPL-ELSGRFQKTVTGLLIENSRPSDSGSYVCEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLED--GTPKIISAFSEKVVSPAEPVSLVCNVKGTPLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPI--------ALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQRKEMSCTAHGEKPIIVRWEKEDRIINPEM-ARYLVSTKEVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPP-EIEIKDVKARTITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNEITITADEAAPDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLIDGELGEIKNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPD-----------SFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGSFIIRTVKAEDSGYYSCVANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWL---PGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWT-TAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQANFATLNYDGSTIPPL 1576 HSP 2 Score: 109.768 bits (273), Expect = 1.802e-22 Identity = 68/191 (35.60%), Postives = 97/191 (50.79%), Query Frame = 0
Query: 10 WCCGILLFAQSDTNGPVFIQEPPNQMDFSN----------TTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYV 190
W + LF QS N VF +EP + + F N T+GT + C + G P + W G + DVPG+R V NG L + PF ++ +H TY C AEN GK++S+DV ++AV+ + Y V VE + + GN +FKC IPS V V V+ W E SL + F++ T G Y+
Sbjct: 2 WILALSLF-QSFAN--VFSEEPHSSLYFVNASLQEVVFASTSGTLVPCPAAGIPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSW-EKDTVSLVSGSRFLI-----TSTGALYI 183 HSP 3 Score: 91.6633 bits (226), Expect = 6.810e-17 Identity = 151/620 (24.35%), Postives = 231/620 (37.26%), Query Frame = 0
Query: 354 FQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQV--------GGTLII------KEAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKN------GEPVGHTET-TLRINSVKKEDRGMY--QCFVRNDQESAQATGELKLG--GRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTWEKDGRQL-PFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQRE-DSALFTC 931
F T G V CPA G P RWY +A + + V GTL I + + Y C N G + V + P +V VE ++ + G A FKC + V V W K+ G T T L I V+ ED G+Y +C R+ + TGE + R DP P + FD G V L C A G P P+ +W E G Q V+ L I +R G+Y C+ S++ G +L V P + P KV + G + ++C V G ++W ++G L P + + N I + K D Y C R D+ SA+ + V + + + +F + V++ + ++C++ PL WT++ D +GS +I IT + VV+ L + + ++ DG G Y C A+N G + A+I V+ P S K TA+ +T + C G I W N L N R+ + E+ T+ + Q+E D +TC
Sbjct: 36 FASTSG--TLVPCPAAGIPPVTLRWY-----------LATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTM--RGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNED-GLYNYRCITRH-----RYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQ---------KTVTGLLIENSRPSDSGSYVCEVSNRYGTAKVIGRLYVK-QPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDK-LSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVSLVCNVK--GTPLPTVTWTLD--DDPILKGSGHRIS--------QMITSEGNVVSYLNISSS---------------QVRDG------------GVYRCTANNSAGVVLYQARINVRGPASIRPMKNI-TAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNH------RQVAFENN--GTLKLSDVQKEVDEGEYTC 575
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|238064982|sp|Q9VS29.3|DSCL_DROME (RecName: Full=Down syndrome cell adhesion molecule-like protein Dscam2; Flags: Precursor) HSP 1 Score: 410.223 bits (1053), Expect = 1.518e-114 Identity = 353/1327 (26.60%), Postives = 579/1327 (43.63%), Query Frame = 0
Query: 359 GGNIAVTCPAQGYPIPVFRWY--KFMESNNNKKLVALDDRVKQVGGTLI----IKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVG-------HTETTLRINSVKK-EDRGMYQCFVRNDQ-ESAQATGELKLGGRFDPPEFVS-AFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEK----------DGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGML----STISIKRTQREDSAL----------FTCVATNAFGSDDTSINLIIQEKPETPYG----LKVVDKTGRTVKLSWQAPYN--GNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRN--TKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQ--------LPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQ---DWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVNLVVPVVAAIAVIVVAIAVICV 1625
G +++ C A G P P W F +N + ++ + V G +I I V+D G+Y C+ N G L + + + PK V G + KC G P++ ++W + G + + +L I+ V+K D G+Y C+ RN Q SA+ +GE+ + PP AF + ++ V++GDP ++ W G +G+ + S L+I + G Y C A + + ++A L V P ++ + + V + + + C G P S+ W+K + R+ PF + NG+L + +V+ + Y C A N G + + V P S ++ +GD A + C++S GD+P+ I W ++ N L P+ + + L I+ + + G Y C+ASN G + ++ VQ PP +VL+ + + I W K L T +Y + E + D + I +K ++ + F +A + G S LI++ +P+ P G L + + +SW AP + ++ Y + +K S T+Y+F V+ + G +G E SG R V Q ++G GP+S+ T E P++PP +V LSSQ+++V+W PP+ NG+++GYK+++ P PS ++ +T LT L+KYTNY++QVLA T GDGV S+ L +E+D+P P+ +K ++ S +++ +SW P EPNG I +Y++Y + ++ ++ + + + Q ++ L+ Y+FWVTA T +GEG S + TNRIPA+I SF V + V LPC AVG P+ W + +RQ L G L I+ + D G Y C V+N G D +TH L+V PP P + +TS T+ +I + K P+ GY L Y+ G+ + Q+ + L L+CG Y ++++A N +G P ST L T+G P P + L ++ S+ + L++W D GCP+LYFV++Y+ +W LVSN++K V+ +L P+T Y LR+ AHN AG S AE+ F TLT G P EI G S N+NL++P +AA++ + I +I V
Sbjct: 437 GPAVSLKCSAAGNPTPQISWTLDGFPLPSNGRFMIG---QYITVHGDVISHVNISHVMVEDGGEYACIAENRAGRVQHAARLNIYGLPYIRLIPKVTAVS-GETLNLKCPVAGYPIEEIHWERGGRELPDDIRQRVQPDGSLTISPVQKNSDSGVYTCWARNKQGHSARRSGEVTV---IVPPSIEPFAFQEGLAEGMRTRTVCGVSRGDPPLKLIWLKDGDPLPD----LLGANVTMLDQYSSLLSIPSLSATHSGEYTCVAKNPAAEIKYTALLQVKVPPRWIVEPVDANVERNRHIMLHCQAQGVPTPSIVWKKATGSKSGEYEEVRERPFTK---LLGNGSLLLQHVKEDREG-FYLCQANNGIGTGIGKVIQLKVNSSPYFSSTSRSV-MVKKGDTALLQCAVS-GDKPI--------------------------------NIVWMRSGKNTLN----PSTNYKISVKQEATPDGVSAELQIRTVDATDSGPYFCRASNLYGNDQQLVQLQVQEPPL-------------PPSVLEAAMISSRSVNIKWQ--PKTLGTGDVTKYIV-EFREADPLFVDQWQQIEVKDPPHFNAMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGPPLSLSARPLSSTELLISWVAPLPELRHGDIQGYNVGYK------------------------LSSSGNTAYNFTSVSGDGDGGNG----------ELLLSGLAKFARYTVVVQAFNQVGPGPLSEPTAAQTMEDVPSRPPEDVRCAALSSQSLQVSWQPPPIYHTNGLLQGYKLIFEPIIDDIQPSKDEVESRKTTALTMVLTGLRKYTNYSIQVLAHTRMGDGVVSKPLFCHSEEDVPEAPADIKVVSSSSQSLYISWLPPNEPNGVITKYSLYTRVVNGREELNNEKRSLPSQQAYYEAKGLHPHMEYQFWVTASTRVGEGKSSRVSSQITTNRIPARIISFGGPVVRPWRSTVTLPCTAVG--KPKREW------FKSDVALRQGGLHNSQLLDSGDLIISSLQLADGGNYSCQVDNGIGTDRLTHTLIVQVPPTAPVLYVTSATSSSILMHWKCGF-TGNAPITGYTLFYRRANGNTDEMQLSRHASSHELKGLMCGSTYQIHLSAQNKVGTSPTSTILHVRTQGQSPGHPASTALLAPNSTSLLVRLHSWPDNGCPLLYFVLQYRAVTDDPDAEWVLVSNALKPQRRIVINNLQPSTLYQLRMEAHNVAGISQAEFNFVTLTKDGDPPPP--EIMHRGRSG---------QTTVIFANINLLIPTIAAVSGMFCTIIMIIV 1640 HSP 2 Score: 403.675 bits (1036), Expect = 1.522e-112 Identity = 364/1299 (28.02%), Postives = 581/1299 (44.73%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSA-FQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD-RVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHY--DGNPV--KSVYWLKNGEPV---GHTETTLRINSVKKEDRGMYQCFVRNDQ-ESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGML--STISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKP-ETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEF-KPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVST--DNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSW--QYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNA--------LQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHW---------------KMRGQPI-----PKNDRI--RQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPE----VTITSQTTDTITVKLKTSNPED----KTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPK---STQLTAN 1468
VV Q Y+ + G +A+ +C VP+FV ++V +V W+ S DGK+ +LP+GEL I N+ D ++++CR+ HRLT + +S+ +L I P S+V+ +A Q +Q + C AQG P P + W+ N L L RV+ +G L I+ +DSG Y C N G S E LTV P+ VE+ P V G +A F+C +G+PV +++ W K+G + G E TL + V +E+RGMYQC VR + ++ QAT EL+LG PP + +F T QPGP VSLKC A G+P P++ W + G S+G +G + + +GDV+S++NIS + GG Y C A ++ G V H+A+LN+ G PY+R + + V+G+++ + CPVAGYPI + WE+ GR+LP + RQ V +G+L IS VQ+ D+ YTC ARN +G+SAR VTV+ PP+I PF+F ++ + EG + +C +SRGD PL K+ DG P P D +N + L I ++ + G Y C A N I A + V+ PP + ++ + + +L C+A+G I+W K+ + Y E +L ++ ++ + + + C A N G T I +IQ K +PY T R+V + G++ L + + KPI W +G +L P+T+Y ++ + + G S + I T + SGP + R +D+ LV P PP+ + +SS+++ + W P G + Y V + + + + +V A + +LK T Y +V+A + G S+ L TE P GPP S+ A +S +L+SW PE +G I Y V K L S + A V+ L +S L K ARY V A +G G S PT A +D + +DV+ C A+ S + Q+ W K+ +PI P D + R+ ++ +T + K + + + G +V+ L + D PE + + S ++ ++ + N + K ++ +++ + E + +P + L Y +VTA +G G S+Q+T N
Sbjct: 128 VVAQAYKVDVEVLSAARGCTAILRCVVPTFVKELVRVVSWVHEPAIYIYPSLQG--DGKFHLLPTGELLIHNLQESDESQSFRCRSMHRLTRQVVVSSPT-RLRINSHRGIISP---SVVEHTAHVQVSQDEGAVLLCVAQGCPSPEYSWFTH---NGAGPLPVLSGPRVRLLGPILAIEAVTGEDSGVYKCTAGNVGGEASAELRLTVATPIQVEISPNVLSVHMGGTAEFRCLVTSNGSPVGMQNILWYKDGRQLPSSGRVEDTLVVPRVSRENRGMYQCVVRRPEGDTFQATAELQLGD--APPVLLYSFIEQTLQPGPAVSLKCSAAGNPTPQISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDGGEYACIAENRAGRVQHAARLNIYGLPYIRLIPKVTAVSGETLNLKCPVAGYPIEEIHWERGGRELPDDIRQRVQPDGSLTISPVQKNSDSGVYTCWARNKQGHSARRSGEVTVIVPPSIEPFAF-QEGLAEGMRTRTVCGVSRGDPPL--------------------KLIWLKDGDPLP----------------------DLLGANVTMLDQYSSLLSIPSLSATHSGEYTCVAKNPAAEIKYTALLQVKVPPRWIVEPVDANVERNRHIMLHCQAQGVPTPSIVW----KKATGSKSGEYEEVRERPFTKLLGNGSLLLQHVKEDREGFYLCQANNGIG---TGIGKVIQLKVNSSPY----FSSTSRSVMVK-----KGDTALLQCAVSGDKPINIVWMR-------------SGKNTLNPSTNY--KISVKQEATPDGVSAELQIRTVDATDSGP-----------YFCRASNLYGNDQQLVQLQVQEPPLPPSVLEAAMISSRSVNIKWQ--PKTLGTGDVTKYIVEFREADPLFVDQWQQIEVKDPPHFNAMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGPPLSLSARPLSSTELLISWVAPLPELRHGDIQGYNVGYK-LSSSGNTAYNFTSVSGDGDGGNGELLLS----GLAKFARYTVVVQAFNQVGPGPLS-----EPT------AAQTMEDVPSRPPEDVR--CAALSSQSLQVSWQPPPIYHTNGLLQGYKLIFEPIIDDIQPSKDEVESRKTTALTMVLTGLRKYTNYSIQVLAHTRMGDGVVSKPLFCHSEEDVPEAPADIKVVSSSSQSLYISWLPPNEPNGVITKYSLYTRVVNGREELNN-EKRSLPSQQAYYEAKGLHPHMEYQFWVTASTRVGEGKSSRVSSQITTN 1309 HSP 3 Score: 387.882 bits (995), Expect = 1.378e-107 Identity = 352/1313 (26.81%), Postives = 567/1313 (43.18%), Query Frame = 0
Query: 19 QSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIHVVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSN--------YDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLS--AFQKTQGGNIAVTC--PAQGYPIPV--FRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGG--ESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQA-RTKYGGTYECQASSKVGLVSHSAK----LNVNGAPYVRKMLPMKVVA-GKSMFVTCPVA-GYPISSVTWEKDGRQLP---FNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKII--DGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKR-LDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTM-AGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTD-----NEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQYPE--EPNGKIIQYTV----YIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEG 1273
++ GP F+ EPP +++FSN++G + C + G+P P + WV DGS V ++ G+R+V+ NG LVL PF A Y+Q+VH YRCIA N++G++ SRDVQVRAVV Q+Y V VE+ G + +C +P++V +LV+V+ WV P + + D GK +++ + L+ S + S H R + VV P + ++ I+ S + D ++ + S + S ++ G V L L I V+ +D YKC T + GE ++ +L + P+ V++S GG C + G P+ + WYK + + + RV+ TL++ ++ G Y C+V G ++ + AP + +Q + G + + KC GNP + W +G P+ G + + I+ V ED G Y C N Q L + G ++ VT G ++LKC G P E+ W G E D +V S L IS + G Y C A +K G HSA+ + V P + + +A G C V+ G P + W KDG LP + + + +L + YTCVA+N P A + ++ QV + PRW VEP D + + C+A G P P I WKKA T + +++ +R + +GSL+++++K+ EG+YLC+A+NGIG GI V ++ V + P F R+ + +LQC G+KPI I+W + K L+ + + + ++++E+ DG+ + + I+ DS + C A+N +G+D + L +QE P P L+ + R+V + WQ G ++T+Y++EF+ + + + V A + +L+PAT Y FRV+A+ G S PS + + T + P+GPP+ + LSS + ++W +P +G I+GY V Y S + + + T VS D E L+ L K+ YTV V AF G G SE + T +D+P PP V+ A+S +++ VSWQ P NG + Y + I ++ S+D ++ K AL M + L K Y V AHT +G+G
Sbjct: 25 EAHLRGPGFVMEPPGRVEFSNSSGGWLDCSASGSPQPTVDWVHADGSAVTEIHGVRRVLRNGTLVLMPFAAAAYHQDVHNTIYRCIASNSVGRIVSRDVQVRAVVAQAYKVDVEVLSAARGCTAILRCVVPTFVKELVRVVSWVHE--------PAIYIYPSLQGD-GKFHLLPTGELLIHNLQESDESQSFRCRSMH-------RLTRQVVVSSPTRLRINSHRGIISPSVVEHTAHVQVSQDEGAVLLCVAQGCPSPEYSWFTHNGAGPLPVLSGPRVRLLGPILAIEAVTGEDS-GVYKC-TAGNVGGE---ASAELRLTVATPIQ---------VEISPNVLSVHMGGTAEFRCLVTSNGSPVGMQNILWYK------DGRQLPSSGRVED---TLVVPRVSRENRGMYQCVVRRPEGDTFQATAELQLGDAPPVLLYSFIEQTLQPGPAVSLKCSAAGNPTPQISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDGGEYACIAENRAGRVQHAARLNIYGL----PYIRLIPKVTAVSGETLNLKCPVAGYPIEEIHWERGGRELPDDIRQRVQPDGS--------LTISPVQKNSDSGVYTCWARNKQG---HSARRSGEVTVIVPPSIEPFAFQEGLAEGMRTRTVCGVSRGDPPLKLIWLKDGDPLPDLLGANVTMLDQYSSLLSIPSLSATHSGEYTCVAKN----------------PAAEIKYT---------ALLQVK----------VPPRWIVEPVDANVERNRHIMLHCQAQGVPTPSIVWKKA---------TGSKSGEYEEVRERPFTKLLGNGSLLLQHVKEDREGFYLCQANNGIGTGIGKVIQLKVNSSPYFSSTSRSVMVKKGDTALLQCAVSGDKPINIVWMRSGKNTLNPSTNYKISVKQEATPDGVSAELQIRTVDATDSGPYFCRASNLYGNDQQLVQLQVQEPPLPPSVLEAAMISSRSVNIKWQPKTLGTGDVTKYIVEFREADPLFVDQWQQIEVKDPPHFNAMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGPPLSLSARP-------------------------------------LSSTELLISWVAPLPELRHGDIQGYNVGYKLSSSG-NTAYNFTSVSGDGDGGNGELLLSGLAKFARYTVVVQAFNQVGPGPLSEPTAAQTMEDVPSRPPEDVRCAALSSQSLQVSWQPPPIYHTNGLLQGYKLIFEPIIDDIQPSKDEV-ESRKTTALTMV--LTGLRKYTNYSIQVLAHTRMGDG 1198
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|939319698|sp|F1NY98.3|DSCAM_CHICK (RecName: Full=Down syndrome cell adhesion molecule homolog; Flags: Precursor) HSP 1 Score: 403.29 bits (1035), Expect = 2.019e-112 Identity = 351/1319 (26.61%), Postives = 564/1319 (42.76%), Query Frame = 0
Query: 311 YKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQK---TQGGNIAVTCPAQGYPIPVFRWYKFME---SNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDY-GRSATFKCHYDGNPVKSVYWLKNGE--PVGHTET------TLRINSVKKE-DRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVA-KGDPAPEVKWFIYGSEAESDGVLQVGSF--NSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWE-KDGRQLP------FNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPP---SFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYG----LKVVDKTGRTVKLSWQAP--YNGNSNLTRYVIEFKPIK--GTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVY--------IKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPK----NDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFGD-WNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPV 1575
Y+C + + K+SA VI E G PK +SAF + + G +++ C +G P+P W + + + ++ + V L I +V D G Y C NNS G + + V P S+ P + + GR C G P S+ W KN P H + TL+++ V+KE D G Y C N Q + + P F+ F+ G V + CV GD + W + DG S DN D S L IS + G Y C A + V H ++L V P +V + + GK++ + C GYP+ ++ W+ G +P N R + NG+L I +V +ED+ Y C ND G + +TV P I + + +G ++ C+ + G++P++ RW E D I+ + + V++ LQ+ PT + + G++ C A N G + ++ VQ PP EI++ ++ T+ G PI +++ K + D ++ S + + I + + + ++ A N G + S L I P G +++ + ++++++W+AP + N + Y I ++ G + ++ + GD + + +L+ T Y V A N R G GP S E++ T E P+ PP V T S + I ++WS+ + NG+++G++V+Y + + +T EL L+KYTNY++QVLAFT GDGV+SE + + T++D+PGPP+ VKA A S + VSW P + NG I +YTV+ I E + S D S+++ NL++ +Y WV A T G G+ S +T+ P + PA+I +F +D+ LPC AVG P P + W P + R +GS I V ED+G Y C+ +N +G D + L V PPD P +T++ T+ +IT+ P D + + GYIL Y + + W + I + L++L CG Y +TA N +G G S + A T G EP E F ++ V L+L W DGGCPI F +EY+P WT + ++++ DL ATWY L++ N+AG + + +FATL G TI P+
Sbjct: 409 YQCFVR-----KDKMSAQDYVQVILE---DGTPKI-----ISAFSEKVVSPGEPVSLMCNVKGTPLPTITWTLDEDPIVKDGSHRISQIITSEGNVVSYLNISNTQVRDGGVYRCTANNSAGVVLYQARINVRGPASIR--PMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTC---NVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITW-------QKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPTIVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVL-EEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYP-NTTLATQGQKKEMSCT-AHGEKPIIV-RWEKE----------DRIINPEMSRYLVSTKEVGDEVISTLQILPTVRE---------------------------DSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARSIALRWTM---GFDGNSPI-TGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHPSSTYNIRMY---AKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQACN-------------------------------------RAGIGPSSQEIITTTLEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGELGEIRNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAASSASTVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPD-----------SFSYRIPNLSRNRQYSVWVVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPAPTVKWMKDSNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWI---PGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLETLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWT-TAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQAKFATLNYDGSTIPPL 1602 HSP 2 Score: 374.4 bits (960), Expect = 2.186e-103 Identity = 318/1153 (27.58%), Postives = 496/1153 (43.02%), Query Frame = 0
Query: 222 EIRPGQIH---VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDG-KYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGG-NIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYR-NGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIID--GSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDP-RYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPE--TPYGLKVVDKTGRTVKLSWQAPYNG-------------NSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSY--------------------HFRVVAQNDIGV--------SGPSDTVTIETAEEAPSGPPV----DI-----RVAAVDQH-----TLRM------GQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAE---LTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQ-YPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+IR +H V+ +PY ++ + GN A+FKC +PS V + +V W ++ S G ++++ +G L I +V +DG Y+C T+HR TGET+ S +A +L +++P A+ P SI+ +K G + + C A G+P P +RW K + D R +Q L+I+ + DSG Y+C V N+ G + L V PL + P++ G + C G + + W +NGE + G L ++ + K D G YQCFVR D+ SAQ ++ L P+ +SAF PG VSL C KG P P + W + DG ++ + G+VVSYLNIS + + GG Y C A++ G+V + A++NV G +R M + +AG+ ++ C V GYP S+ W K+ LPFN RQ + NGTL +S+VQ++ D YTC S + VTV PP I PF F + I + F + C + GD P+ ITW+K RP P AS I ID SL I N+ + G Y C A N + +++ V+ PP F ++ Q + + +L C A+G I+W + P R + +G L IK EDS + C +N G+D + + + P T Y + G+ ++S A N ++RY++ K + + + ++P + +G FS SY R V I + + P IE ++ S V D+ + +D H +RM G+ S+E+ + T E AP PP +V + +SSQ+I+VTW +P NG+I+GY++ Y + + T ++E L +LKK+T Y + V A G G S+ + +TT +D+P PP +V+A A S E I +SW +E I+Q I + + V Q S ++D L K Y V A T G+G S ++ +P
Sbjct: 136 KIRSQDVHIKAVLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSW--------EKDTVSLVSGPRFLITSTGALYILDVQNEDGLYNYRCITRHRYTGETRQSNSA-RLFVSDP-ANSAP---SILDGFDHRKAMAGQRVELPCKASGHPTPKYRWLK------DNIPWEPDSRFRQTVTGLLIENTRPSDSGNYVCEVWNNYGTAEMIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGNNVRITGINRENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVILED--GTPKIISAFSEKVVSPGEPVSLMCNVKGTPLPTITWTLDEDPIVKDGSHRISQIITSEGNVVSYLNISNTQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVF--IPCVVVSGDLPI--------------------------------TITWQK------DGRPIP-------ASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPTIVWKYSKGAGVPQFQPIALNGRIQLLTNGSL---LIKHVLEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTKEVGDEVISTLQ--ILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARSIALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHPSSTYNIRMYAKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQEIITTTLEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGELGEIRNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVP 1215 HSP 3 Score: 114.775 bits (286), Expect = 6.557e-24 Identity = 60/165 (36.36%), Postives = 90/165 (54.55%), Query Frame = 0
Query: 27 FIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVI 191
F+ ++ F++TTGT + C + G P + W G + DVPG+R V NG L + PF +N +H TY C AEN GK++S+DV ++AV+ + Y V VE + + GN +FKC IPS V + V+ W E SL + P F++ T G Y++
Sbjct: 52 FVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSW-EKDTVSLVSGPRFLI-----TSTGALYIL 210 HSP 4 Score: 88.1965 bits (217), Expect = 6.618e-16 Identity = 153/647 (23.65%), Postives = 236/647 (36.48%), Query Frame = 0
Query: 333 VITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQV--------GGTLII------KEAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKN------GEPVGHTET-TLRINSVKKEDRGMY--QCFVRNDQESAQATGELKLG--GRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTWEKDGRQL-PFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKII--DGSLI----IKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQRE-DSALFTC 931
V +E L + ++ ++ F T G V CPA G P RWY +A + + V GTL I + Y C N G + V + P +V VE ++ + G A FKC + + V W K+ G T T L I V+ ED G+Y +C R+ + TGE + R DP P + FD G V L C A G P P+ +W E D + V+ L I R G Y C+ + G +L V P + P KV + G + ++C V G ++W ++G + P N+ + N I + K D Y C R D+ SA+ + V + + + +F + V++ G+ +MC++ G P P ITW L P D + R +II +G+++ I N + + G Y C A+N G + A+I V+ P S K TA+ +T + C G I W N+ L N R+ + E+ T+ + Q+E D +TC
Sbjct: 41 VFSEDLHASLYFVNASLQEVVFASTTG--TLVPCPAAGIPPVTLRWY-----------LATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKAM--RGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGPRFLITSTGALYILDVQNED-GLYNYRCITRH-----RYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELPCKASGHPTPKYRWLKDNIPWEPDSRFR---------QTVTGLLIENTRPSDSGNYVCEVWNNYGTAEMIGRLYVK-QPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGNNVRITGINRENLIMDGMAKSDGGAYQCFVRKDK-MSAQDYVQVILEDGTPKIISAFSEKVVSPGEPVSLMCNVK---------------------------------GTPLPTITW------TLDEDPIVKD------GSHRISQIITSEGNVVSYLNISNTQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNI-TAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNH------RQVAFENN--GTLKLSDVQKEVDEGEYTC 601 HSP 5 Score: 60.4622 bits (145), Expect = 2.125e-7 Identity = 45/132 (34.09%), Postives = 56/132 (42.42%), Query Frame = 0
Query: 1251 VDNLNKKARYEF-WVTAHTTIGEGSPSIKVTL---SPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGP 1378
+D N+ Y + +T H GE S L P N P+ + FD AM Q V+LPC A G P P+ W P + R RQ G L I D+G YVC V N YG + L V P
Sbjct: 210 LDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHR-KAMAGQRVELPCKASGHPTPKYRWLKDNIPWEPDSRFRQTVTG-LLIENTRPSDSGNYVCEVWNNYGTAEMIGRLYVKQP 339
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|12643619|sp|O60469.2|DSCAM_HUMAN (RecName: Full=Down syndrome cell adhesion molecule; AltName: Full=CHD2; Flags: Precursor) HSP 1 Score: 402.134 bits (1032), Expect = 3.927e-112 Identity = 355/1319 (26.91%), Postives = 566/1319 (42.91%), Query Frame = 0
Query: 311 YKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQK---TQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQ-------VGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDY-GRSATFKCHYDGNPVKSVYWLKNGE--PVGHTET------TLRINSVKKE-DRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVA-KGDPAPEVKWFIYGSEAESDGVLQVGSF--NSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWE-KDGRQLP------FNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPP---SFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYG----LKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVY--------IKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPK----NDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFGD-WNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPV 1575
Y+C + + KLSA V+ E G PK +SAF + + +++ C +G P+P W +++ L R+ Q V L I ++V D G Y C NNS G + + V P S+ P + + GR C G P S+ W KN P H + TL+++ V+KE D G Y C N Q + + P F+ F+ G V + CV GD + W + DG GS DN D S L IS + G Y C A ++ V H ++L V P +V + + GK++ + C GYP+ ++ W+ G +P N R V NG+L I +V +ED+ Y C ND G + +TV P I + + +G ++ C+ + G++P++ RW E D I+ + + + V++ LQ+ PT + + G++ C A N G + ++ VQ PP EIK + T+ G PI +++ K + D ++ S + + I I + ++ A N G + S L I P G + + + ++++++W+AP + + ++ G Q G ++ F +++ + SG S+ T++ + + V Q R G GP S E++ T E P+ PP V S ++I ++WS+ + NG+++G++V+Y + + +T EL L+KYTNY++QVLAFT GDGV+SE + + T++D+PGPP+ VKA A S + VSW P + NG I +YTV+ I E + S D S+++ NL++ +Y WV A T+ G G+ S +T+ P + PA+I +F +D+ LPC AVG P+P + W P + R +GS I V ED+G Y C+ NN +G D + L V PPD P +T++ T+ +IT+ P D + + GYIL Y + + W + I + L++L CG Y +TA N +G G S + A T G EP E F ++ V L+L W DGGCPI F +EY+P WT + ++++ DL ATWY L++ N+AG + + FATL G TI P+
Sbjct: 383 YQCFVR-----KDKLSAQDYVQVVLE---DGTPKI-----ISAFSEKVVSPAEPVSLMCNVKGTPLPTITW----TLDDDPILKGGSHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIR--PMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTC---NVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITW-------QKDGRPIPGSLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVV-EEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYP-NTTLATQGQKKEMSCT-AHGEKPIIV-RWEKE----------DRIINPEMARYLVSTKEVGEEVISTLQILPTVRE---------------------------DSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKARTITLRWTM---GFDGNSPI-TGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMY---AKNRIGKSEPSNELTITADEAAPDGPPQEVHLEPISSQSIRVTWKAP---------------------KKHLQNGIIRGYQI--GYREYSTGGNFQFNIIS---VDTSGDSEVYTLDNLNKF-------TQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLMDGELGEIKNITTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPD-----------SFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGSFIIRTVKAEDSGYYSCIANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWL---PGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWT-TAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQANFATLNYDGSTIPPL 1576 HSP 2 Score: 330.487 bits (846), Expect = 9.131e-90 Identity = 292/1107 (26.38%), Postives = 460/1107 (41.55%), Query Frame = 0
Query: 222 EIRPGQIH---VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDG-KYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGG-NIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYR-NGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIID--GSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDP-RYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPE--TPYGLKVVDKTGRTVKLSWQAPYNG-------------NSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTD-NEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYPEE--PNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMS--HQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPA 1289
+IR +H V+ +PY ++ + GN A+FKC +PS V + +V W ++ S G ++++ +G L I++V +DG Y+C T+HR TGET+ S +A +L +++P A+ P SI+ +K G + + C A G+P P +RW K +N L L R ++ L+I+ + DSG Y+C V+N G V L V PL + P++ G + C G + + W +NGE + G L ++ + K D G YQCFVR D+ SAQ ++ L P+ +SAF P VSL C KG P P + W + G ++ + G+VVSYLNIS ++ + GG Y C A++ G+V + A++NV G +R M + +AG+ ++ C V GYP S+ W K+ LPFN RQ + NGTL +S+VQ++ D YTC S + VTV PP I PF F + I + F + C + GD P+ ITW+K RP P S I ID SL I N+ + G Y C A N + +++ V+ PP F ++ R Q + + +L C A+G I+W + P R + +G L IK EDS + C +N G+D + + + P T Y + G+ ++S A N + RY++ K + + + ++P + +G FS SY G + T +E P P ++I+ TLR G N I GY + +D + R VS N A + + + Y++++ A G S LT T ++ P GPP V +S ++I V+W+ P++ NG I Y + +E + V+ S + +DNLNK +Y V A G G S ++ + +P+
Sbjct: 110 KIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYITVVSW--------EKDTVSLVSGSRFLITSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQSNSA-RLFVSDP-ANSAP---SILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLK-----DNMPL-ELSGRFQKTVTGLLIENIRPSDSGSYVCEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEILNPGKNVRITGINHENLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLED--GTPKIISAFSEKVVSPAEPVSLMCNVKGTPLPTITWTLDDDPILKGGSHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVF--IPCVVVSGDLPI--------------------------------TITWQK------DGRPIP-------GSLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSL---LIKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTKEVGEEVISTLQ--ILPTVREDSGFFSCHAINSY-------------GEDRGIIQLTVQEPPDPPEIEIKDVKARTITLRWTMG-----------------------------------------FDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNELTITADEAAPDGPPQEVHLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISVDTSGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPS 1089 HSP 3 Score: 109.383 bits (272), Expect = 2.698e-22 Identity = 59/175 (33.71%), Postives = 93/175 (53.14%), Query Frame = 0
Query: 16 LFAQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYV 190
+F++ + F+ ++ F++TTGT + C + G P + W G + DVPG+R V NG L + PF ++ +H TY C AEN GK++S+DV ++AV+ + Y V VE + + GN +FKC IPS V + V+ W E SL + F++ T G Y+
Sbjct: 15 VFSEDLHSSLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYITVVSW-EKDTVSLVSGSRFLI-----TSTGALYI 183 HSP 4 Score: 92.4337 bits (228), Expect = 3.415e-17 Identity = 154/641 (24.02%), Postives = 239/641 (37.29%), Query Frame = 0
Query: 333 VITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQV--------GGTLII------KEAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKN------GEPVGHTET-TLRINSVKKEDRGMY--QCFVRNDQESAQATGELKLG--GRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTWEKDGRQL-PFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQRE-DSALFTC 931
V +E L S ++ ++ F T G V CPA G P RWY +A + + V GTL I + + Y C N G + V + P +V VE ++ + G A FKC + + V W K+ G T T L I V+ ED G+Y +C R+ + TGE + R DP P + FD G V L C A G P P+ +W E G Q V+ L I R G+Y C+ S++ G +L V P + P KV + G + ++C V G ++W ++G L P + + N I + K D Y C R D+ SA+ + V + + + +F + V++ + +MC++ PL WT++ D +G +I IT + VV+ L + + ++ DG G Y C A+N G + A+I V+ P S K TA+ +T + C G I W N+ L N R+ + E+ T+ + Q+E D +TC
Sbjct: 15 VFSEDLHSSLYFVNASLQEVVFASTTG--TLVPCPAAGIPPVTLRWY-----------LATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTM--RGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNED-GLYNYRCITRH-----RYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQ---------KTVTGLLIENIRPSDSGSYVCEVSNRYGTAKVIGRLYVK-QPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEILNPGKNVRITGINHENLIMDHMVKSDGGAYQCFVRKDK-LSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVSLMCNVK--GTPLPTITWTLD--DDPILKGGSHRIS--------QMITSEGNVVSYLNISSS---------------QVRDG------------GVYRCTANNSAGVVLYQARINVRGPASIRPMKNI-TAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNH------RQVAFENN--GTLKLSDVQKEVDEGEYTC 575 HSP 5 Score: 63.929 bits (154), Expect = 1.452e-8 Identity = 44/131 (33.59%), Postives = 59/131 (45.04%), Query Frame = 0
Query: 1252 DNLNKKARYEF-WVTAHTTIGEGSPSIKVTL---SPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGP 1378
D N+ Y + +T H GE S L P N P+ + FD AM Q V+LPC A+G P P W P+ + R ++ G L I + D+G YVC V+N+YG V L V P
Sbjct: 185 DVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHR-KAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTG-LLIENIRPSDSGSYVCEVSNRYGTAKVIGRLYVKQP 313
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|939319686|sp|E1C8P7.2|DSCL1_CHICK (RecName: Full=Down syndrome cell adhesion molecule-like protein 1 homolog; Flags: Precursor) HSP 1 Score: 392.889 bits (1008), Expect = 3.991e-109 Identity = 356/1324 (26.89%), Postives = 571/1324 (43.13%), Query Frame = 0
Query: 323 TKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD---------RVKQV---GGTLI----IKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLK-------NGEPVGHTETTLRINSVKK-EDRGMYQCFVR-----NDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCV-AKGDPAPEVKWFIYGSEAESDG--VLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWE--------KDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPS------FEIKKRTQ----TALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYG----LKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQ----PIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFG-DWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDW-TLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSG 1582
T+ S TA I L G P+ S S G ++ C A+G P P W ALDD R Q GT + + ++ D G Y C NSVG + + V P S+ V GR C G P S+ W K N V TL++ V+K D G Y C V + +S T ++ P + F+ G ++ + CV + GD + W DG +L ++ + +S L IS K+ G Y C AS+ VS +L V P +V + + GK+ + C V GYP V W+ + +P R + N +L I +V +ED Y C A N G + +TV + PA++ + +G ++ C+ +RG+ P++ RW K D P+ + A+ A+ D ++I +L +K +G+ ++ C A N G + ++ VQ PP E+K R+ T N+++ K W+ K+ N+ P TI + + D +++ R + N G + S L I + P G + + T ++++++W+AP ++ + ++ G Q G P ++ + +V ++ +G S+ T++ ++ + V Q R G GP S E+ T E P+QPP V +++S ++WS PP ++ NGV+KGY+V++ + +T EL ++K+TNY+VQVLA+T GDGV+S VL T++DIPGPP+ +KA+ S +++VSW P +PNG I +YT++ S AP + + Q+ +++ +LN+ +Y WV A T+ G G+ S KVT+ P + PAKI SF +DV+LPC +VG P P + W + P+ + +G+L + V ED+G Y C N +G D + L+V PPD P +T++ + +IT+ P D + + G++L Y + +W I F L+SL CG Y + + A NS+G G S + A T G EP+ + H F +++ L+L W GGCPI V+EY+P+ + W +L +NS G + +L ATWY LR+ A N+AG +FATL G TI P++ G G
Sbjct: 390 TRKSQTAQDFSIIT-LEDGTPRIVS--SFSEKVVNPGEQFSLMCAAKGAPPPTVTW-------------ALDDEPIPRDNGHRTNQYTMSDGTTVSHMNVTSPQIKDGGVYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVA-GRDTFINCRVIGYPYYSIKWYKDSLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKV--------PPLIQPFEFPPASIGQLLYIPCVVSSGDMPIHITW-------RKDGHVILSGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVL-EEDIGYYLCQASNGVGTDISKSMFLTV-KIPAMITSHPNTTIAIKGQSKELNCT-ARGERPII-IRWE------------------KGDTVIDPDRNMRYAI-----------------ATKDNGDEVI-STLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDF--KQSTRNISP--TINQANIVDLHPASVYSIRM----------YSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAP---------------------KKELQNGVIRGYQI--GYRENSPGSNGQYSIV---EMKATGDSEVYTLDNLKKFA-------QYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGEMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVPSSASSVVVSWLPPAKPNGIIRKYTIFCSS-PGSGQPAPSEYETSPDQLFYRIAHLNRGQQYMLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAIKWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQVPPDQPRLTVSKTSASSITLAWI---PGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWSSGGCPITAIVLEYRPKGNWGWQSLRTNS---SGEVFLTELREATWYELRMKACNSAGCGNESTQFATLDYDGSTIPPIKSAQGEG 1587 HSP 2 Score: 374.785 bits (961), Expect = 1.524e-103 Identity = 349/1333 (26.18%), Postives = 571/1333 (42.84%), Query Frame = 0
Query: 3 SLRKELSWCCGILLFAQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYV--ILGNDAL--MKCSIPSFVADQLEVVSWHGSDGSEIRPGQ-IHVVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVD-LVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPL-ASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVG---GTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEP-KQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNS---DNGDVVSYLNISQARTKYGGTYECQASSKVGL-VSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAG--YPISSVTWEKDGRQLPFNDRQTVYRN---GTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLR--PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWK--KAVVNNLQMRPTPNDYQDFDASNDRNIKII-DGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDP--STRNTKVSTDNEA-ELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQYPEEP--NGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
SLRK + G L+ F+ + Q+ FS+T G I C + G+P + W G + DVP +R V ANG L L PF +N +H Y C AEN+ GK++S +++V+AV + Y V VE + + GN +FKC IPS V + V V+ W E S+ F F T G Y+ + DAL +C + + + S+ P + I + +Q +V E+P + + + W+ +G DG++ +G L I ++ +D TY C +T + G L + +PL + PK + G + ++C G P V RWY+ N LV +DD + G TL+I A+ SG Y C +++T+ V ++VV+ G + C G P +V W + EP+ G T + + + S + +D G+Y+C RN SA+ + + G P + A +T G + C G P +KW+ D +L + +NG + +++ + + G Y C + L +S S + V P ++ G+ +++ C V+ PI +TW KDG + T+ +L IS+V K + + YTC+A N ++SR + ++R PR+ V+P ++ G ++C DG+P P++ WK K N Q P P + I+I+ + SL+I+++ + + GYYLC+ASNG+G IS + V+ P T A+ ++ L C A+GE+PI I W + +D + + RY I + D ++ST+ +K R DS F+C A N++G D I L +QE P+ P L++ + R++ L W ++GNS +T + IE+K +W + A + L PA+ Y R+ + N IG S PS +TI T E AP GPP+D+ + QP ++SQ+I+VTW +P NGVI+GY++ Y + + S K + D+E L +LKK+ Y V V AF G G S + +TT +D+P PP +V+A++++ + ++SW P NG + Y V L + N + + ++ + K Y V A+T G+G S + + IP
Sbjct: 11 SLRKAHTEDVGTSLY---------FVNDSIQQVTFSSTVGVVIPCPAAGSPSAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKAVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSW-EKDTVSIIPENRF-----FITSYGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDADPAESIPTMLDSFQSREVRAGRLV--------ELPCIASGYPNPAIRWL-KDGRPLPA------DGRWAKRITG-LSIADLRVEDS-GTYIC----EVTNTFGSAEVTGTLTVIDPLRVTLTPK--------KLKTGIGSTVILSCALSGSPEYVIRWYR------NTDLVVVDDFISIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPIPRDNGHRTNQYTMSDGTTVSHMNVTSPQIKDGGVYRCTARNSVGSAEYQARINVRG----PPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWY-------KDSLLLPDNHRQVVFENG-TLKLMDVQKGMDE--GEYLCSVLIQPQLSISQSVHVTVKVPPLIQPFEFPPASIGQLLYIPCVVSSGDMPI-HITWRKDGHVILSGSGVTIESKEFMSSLQISSVSLKHNGN-YTCIASN-------------------------------------AAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPIPLTGR---------IQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPNTTIAIKGQSKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAIATKDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPP-ELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTL-----------------------------QP--------MTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGEMQN-ITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIP 1192 HSP 3 Score: 69.3218 bits (168), Expect = 3.848e-10 Identity = 49/135 (36.30%), Postives = 64/135 (47.41%), Query Frame = 0
Query: 1264 VTAHTTIGEGSPSIKVTLS-----PTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDT 1393
+T H GE S LS P IP + SF V + V+LPCIA G PNP + W G+P+P + R + G L I + ED+G Y+C V N +G VT L V DP VT+T + T
Sbjct: 198 ITKHKYSGETRQSNGARLSVSDADPAESIPTMLDSFQSREVRAGRL-VELPCIASGYPNPAIRWLKDGRPLPADGRWAKRITG-LSIADLRVEDSGTYICEVTNTFGSAEVTGTLTV---IDPLRVTLTPKKLKT 327
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|73620825|sp|Q8TD84.2|DSCL1_HUMAN (RecName: Full=Down syndrome cell adhesion molecule-like protein 1; AltName: Full=Down syndrome cell adhesion molecule 2; Flags: Precursor) HSP 1 Score: 389.808 bits (1000), Expect = 3.211e-108 Identity = 365/1362 (26.80%), Postives = 585/1362 (42.95%), Query Frame = 0
Query: 285 YDGKYVVLPSGELQIRNVSPDDGFKT--YKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD---------RVKQV---GGTLI----IKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGE--PVGHTET-----TLRINSVKK-EDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCV-AKGDPAPEVKWFIYGSEAESDG--VLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWE--------KDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPP---SFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINL--IIQEKPETPYGLKV--VDKTGR-------TVKLSWQAPYNGNSNLTRYVIEFKPIKGTWA---NDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQ----PIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFG-DWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWT-LVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSG 1582
Y +VLP + IR +S + T K + T+ + TA I L G P+ S S G ++ C A+G P P W ALDD R Q GT I + ++ D G Y C N VG + + V P S+ V GR C G P S+ W K+ P H + TL++ V+K D G Y C V Q + + + + P + F+ G ++ + CV + GD + W DG ++ ++ + +S L IS K+ G Y C AS+ VS +L V P +V + + GK+ + C V GYP V W+ + +P R + N +L I +V +ED Y C A N G + +TV + PA++ + +G ++ C+ +RG+ P++ RW K D P+ + A+ A+ D +++ +L +K +G+ ++ C A N G + ++ VQ PP EI+ E K + + + W +R D N +++ I+ + DS F N +IN I+ P + Y +++ +K GR T+ AP ++T + + I+ TW ++ + ++ G Q G P ++ + +V ++ +G S+ T++ ++ + V Q R G GP S E+ T E P+QPP V +++S ++WS PP ++ NGV+KGY+V++ + +T EL ++K+TNY+VQVLA+T GDGV+S VL T++D+PGPP+ +KA+ S +++VSW P +PNG I +YT++ S AP + + Q+ +++ +LN+ +Y WV A T+ G G+ S KVT+ P + PAKI SF +DV+LPC +VG P P + W + P+ + +G+L + V ED+G Y C N G D + L+V PPD P +T++ + +IT+ T P D + + G++L Y + +W I F LDSL CG Y + + A NS+G G S + A T G EP+ + H F +++ L+L W +GGCPI V+EY+P+ W L +NS G + +L ATWY LR+ A N+AG +FATL G TI P++ G G
Sbjct: 349 YRNTELVLPDEAISIRGLSNETLLITSAQKSHSGAYQCFATRKAQTAQDFAIIA-LEDGTPRIVS--SFSEKVVNPGEQFSLMCAAKGAPPPTVTW-------------ALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNLVGSAEYQARINVRGPPSIRAMRNITAVA-GRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVL-IQPQLSISQSVHVAVKV--PPLIQPFEFPPASIGQLLYIPCVVSSGDMPIRITW-------RKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVL-EEDIGYYLCQASNGVGTDISKSMFLTV-KIPAMITSHPNTTIAIKGHAKELNCT-ARGERPIII-RWE------------------KGDTVIDPDRVMRYAI-----------------ATKDNGDEVVS-TLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIR----------------EVKA-RSMNLRWT---QRFDGN--------------SIITGFDIEYKNKSDSWDFKQSTRNI----SPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQI--GYRENSPGSNGQYSIV---EMKATGDSEVYTLDNLKKFA-------QYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPPTKPNGVIRKYTIFCSS-PGSGQPAPSEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSMDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSASSITL---TWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGLRANS---SGEVFLTELREATWYELRMRACNSAGCGNETAQFATLDYDGSTIPPIKSAQGEG 1586 HSP 2 Score: 370.163 bits (949), Expect = 4.025e-102 Identity = 315/1162 (27.11%), Postives = 489/1162 (42.08%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQ---GGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNI--KIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDP-RYTIREESQEDGML--STISIKRTQREDSALFTCVATNAFGSD-------DTSINLIIQEKPETPYGLK-------VVDKTGRTVKLSWQAPYNGNS-----NLTRYVIEFKPIKGTWANDVDHV-----LVPGDQTMAGVFSLRPATSY------------------------------HFR---------VVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQH-----TLRM------GQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDP--STRNTKVSTDNEA-ELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQYPEEP--NG-----KIIQYTVYIK-ELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
V +PY ++ + GN A+FKC +PS V + V +V W + T +H ++ + G L I +V +D TY+C TKH+ +GET+ S A +L +T+P A P L F + G + + C A GYPIP RW K + + L A K++ G L I + + +DSG Y+C V N+ G +L V PL V + PK+ G + C G+P ++ W +N E V G + TL I S +K G YQCF ++AQ + L P VS+F PG SL C AKG P P V W + DG + + +G +S++N++ + + GG Y C A + VG + A++NV G P +R M + VAG+ + C V GYP S+ W KD LP N RQ V+ NGTL +++VQ+ D Y C S + V V PP I PF F I G + C +S GD P+ ITW+K D Q + + I K SL I ++ + G Y C ASN +S ++ V+ PP F ++ Q + + VL C G P ++W K + +P +Y + +L S++ I+ ED + C A+N G+D I +I P T +K + R + + W+ G++ + RY I K ++ D V L P D+ + FS SY + R ++ DI SD+ + + S P + VD H ++RM G+ S E+ + T E AP PP +V + ++SQ+I+VTW +P NGVI+GY++ Y + + S K + D+E L +LKK+ Y V V AF G G S + +TT +D+P PP +V+AL+++ + ++SW P NG ++I +++Y+ E ++I +V ++ + K Y V A+T G+G S + + +P
Sbjct: 122 VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSW--EKDTVSIIPEH-----RFFITYHGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGA-RLSVTDP-AESIPTI-----LDGFHSQEVWAGHTVELPCTASGYPIPAIRWLK-----DGRPLPADSRWTKRITG-LTISDLRTEDSGTYICEVTNTFGSAEATGILMVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPDEAISIRGLSNETLLITSAQKSHSGAYQCFATRKAQTAQDFAIIALED--GTPRIVSSFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNLVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPASI--GQLLYIPCVVSSGDMPI--------------------------------RITWRK-------------DGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMW----KHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWE---KGDTVIDPDRVMRYAIATK-------DNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNIS--PTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNITTTRERV-------ELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVP 1191 HSP 3 Score: 101.293 bits (251), Expect = 7.960e-20 Identity = 148/618 (23.95%), Postives = 230/618 (37.22%), Query Frame = 0
Query: 362 IAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD-------RVKQVGGTLIIK-------EAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKNGEPV--GHT-----ETTLRINSVKKEDR-GMYQCFVRNDQESAQATGELKL--GGRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLP--MKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYR---NGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVME--PPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWK---KAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCV 932
+ V CPA G P RWY L DD R GTL + + + D+ Y C N+ G ++ P +V VE ++ + G A FKC + V V W K+ + H L I+ V+KED Y+C ++ + +GE + G R DP P + F + G V L C A G P P ++W G +D S ++ L IS RT+ GTY C+ ++ G + L V +V + P +K G ++ ++C + G P ++ W ++ +L D R N TL I++ Q K + Y C A D + +E P IV SF + V+N G+ +MC+ A G P P +TW + +V + R N Y D + ++ + I+ G G Y C A N +G A+I V+ PPS R TA+ +T++ C G I W + L N R+ E+G L +++ E L + +
Sbjct: 43 VVVPCPAAGSPSAALRWY----------LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDN-DYFCTAENAAGKIRSPNIRVKAVFREPYTVRVEDQRSM--RGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPEHRFFITYHGGLYISDVQKEDALSTYRCITKH-----KYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAGHTVELPCTASGYPIPAIRWLKDGRPLPAD---------SRWTKRITGLTISDLRTEDSGTYICEVTNTFGSAEATGILMVIDPLHV-TLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRN-TELVLPDEAISIRGLSNETLLITSAQ-KSHSGAYQCFATRKA--QTAQDFAIIALEDGTPRIVS-SFSEKVVNPGEQFSLMCA---------------------------------AKGAPPPTVTWALDDEPIVRDGSHR--TNQYTMSDGTTISHMNVTG-----PQIRDG--GVYRCTARNLVGSAEYQARINVRGPPSIR-AMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNH------RQVVFENGTLKLTDVQKGMDEGEYLCSVL 578 HSP 4 Score: 80.8777 bits (198), Expect = 1.049e-13 Identity = 93/411 (22.63%), Postives = 152/411 (36.98%), Query Frame = 0
Query: 543 VSLKCVAKGDPAPEVKWFI----------YGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGA---PYVRKMLPMKVVAGKSMFVTC----PVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSD--LTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVAT 934
V + C A G P+ ++W++ + ++G LQ+ F+ + + N Y C A + G + S + V PY ++ + + G C V Y +S V+WEKD + R + +G L IS+VQ+++ STY C+ ++ R ++V +P +P I +G +Q + G ++ C A G+P P I W K RP P D R K I G L I +++ + G Y+C+ +N G A + V P + + I +L C G I W N + + D +IR S E T+ I Q+ S + C AT
Sbjct: 43 VVVPCPAAGSPSAALRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDN----------DYFCTAENAAGKI-RSPNIRVKAVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEY-VSVVSWEKDTVSIIPEHRFFITYHGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVTDPAESIP------TILDGFHSQ------------------------EVWAGHTVELPCTASGYPIPAIRWLK------DGRPLPAD--------SRWTKRITG-LTISDLRTEDSGTYICEVTNTFGSAEATGILMVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLP--DEAISIRGLSNE-----TLLITSAQKSHSGAYQCFAT 389 HSP 5 Score: 62.3882 bits (150), Expect = 4.569e-8 Identity = 45/133 (33.83%), Postives = 61/133 (45.86%), Query Frame = 0
Query: 1264 VTAHTTIGEGSPSIKVTLS---PTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDT 1393
+T H GE S LS P IP + F V V+LPC A G P P + W G+P+P + R + G L I+ + ED+G Y+C V N +G T L+V DP VT+T + T
Sbjct: 199 ITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEV-WAGHTVELPCTASGYPIPAIRWLKDGRPLPADSRWTKRITG-LTISDLRTEDSGTYICEVTNTFGSAEATGILMV---IDPLHVTLTPKKLKT 326
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|292630781|sp|Q4VA61.2|DSCL1_MOUSE (RecName: Full=Down syndrome cell adhesion molecule-like protein 1 homolog; Flags: Precursor) HSP 1 Score: 385.571 bits (989), Expect = 6.759e-107 Identity = 362/1361 (26.60%), Postives = 582/1361 (42.76%), Query Frame = 0
Query: 285 YDGKYVVLPSGELQIRNVSPDDGF--KTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD---------RVKQV---GGTLI----IKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGE--PVGHTET-----TLRINSVKK-EDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCV-AKGDPAPEVKWFIYGSEAESDG--VLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWE--------KDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPP---SFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINL--IIQEKPETPYGLKV--VDKTGR-------TVKLSWQAPYNGNSNLTRYVIEFKPIKGTWA---NDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQ----PIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFG-DWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSG 1582
Y +VLP + IR +S + K + T+ + TA I L G P+ S S G ++ C A+G P P W ALDD R Q GT I + ++ D G Y C NSVG + + V P S+ V GR C G P S+ W K+ P H + TL++ V+K D G Y C V Q + + + + P + F+ G ++ + CV + GD + W DG ++ ++ + +S L IS K+ G Y C AS+ VS +L V P +V + + GK+ + C V GYP V W+ + +P R + N +L I +V +ED Y C A N G + +TV + PA++ + +G ++ C+ +RG+ P++ RW K D P+ + A+ A+ D +++ +L +K +G+ ++ C A N G + ++ VQ PP EI+ E K + + + W +R D N +++ I+ + DS F N +IN I+ P + Y +++ +K GR T+ AP ++T + + I+ TW ++ + ++ G Q G P ++ + +V ++ +G S+ T++ ++ + V Q R G GP S E+ T E P+QPP V +++S ++WS PP ++ NGV+KGY+V++ + +T EL ++K+TNY+VQVLA+T GDGV+S VL T++D+PGPP+ +KA+ S +++VSW P +PNG I +YT++ S AP + + Q+ +++ +LN+ +Y WV A T+ G G+ S KVT+ P + PAKI SF +DV+LPC +VG P P + W + P+ + +G+L + V ED+G Y C N G D + L+V PPD P +T++ + +IT+ T P D + + G++L Y + +W I F LDSL CG Y + + A NS+G G S + A T G EP+ + H F +++ L+L W +GGCPI V+EY+P+ W V + + +L ATWY LR+ A N+AG +FATL G TI P++ G G
Sbjct: 349 YRNTELVLPGEAISIRGLSNETLLISSAQKSHSGAYQCFATRKAQTAQDFAIIV-LEDGTPRIVS--SFSEKVVNPGEQFSLMCAAKGAPPPTVTW-------------ALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVA-GRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVL-IQPQLSISQSVHVAVKV--PPLIQPFEFPPASIGQLLYIPCVVSSGDMPIRITW-------RKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVL-EEDIGYYLCQASNGVGTDISKAMFLTV-KIPAMITSHPNTTIAIKGHPKELNCT-ARGERPIII-RWE------------------KGDTVIDPDRVMRYAI-----------------ATKDNGDEVVS-TLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIR----------------EVKA-RSMNLRWT---QRFDGN--------------SIITGFDIEYKNKSDSWDFKQSTRNI----SPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQI--GYRENSPGSNGQYSIV---EMKATGDSEVYTLDNLKKFA-------QYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNVTTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPPTKPNGVIRKYTIFCSS-PGSGQPAPSEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSLDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSASSITL---TWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGV--RANSSTEVFLTELREATWYELRMRACNSAGCGNETAQFATLDYDGSTIPPIKSAQGEG 1586 HSP 2 Score: 374.015 bits (959), Expect = 3.115e-103 Identity = 313/1141 (27.43%), Postives = 483/1141 (42.33%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQ---GGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNI--KIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDP-RYTIREESQEDGML--STISIKRTQREDSALFTCVATNAFGSD-------DTSINLIIQEKPET-------PYGLKVVDKTGRTVKLSWQAPYNGNS-----NLTRYVIEFKPIKGTWANDVDHV-----LVPGDQTMAGVFSLRPATSY------------------------------HFR---------VVAQNDIGVSGPSDTVTIETAEEAPS-----GPPVDIRVAAVDQHTLRM------GQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDP--STRNTKVSTDNEA-ELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQYPEEP--NGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEG 1273
V +PY ++ + GN A+FKC +PS V + V +V W + + S + ++ + G L I +V +D TY+C T+H+ +GET+ S A +L +T+P A P L F + G ++ + C A GYPIP RW K + + L A K++ G L I + + +DSG Y+C V N+ G +LTV PL V + PK+ G + C G+P ++ W +N E V G + TL I+S +K G YQCF ++AQ + L P VS+F PG SL C AKG P P V W + DG + + +G +S++N++ + + GG Y C A + VG + A++NV G P +R M + VAG+ + C V GYP S+ W KD LP N RQ V+ NGTL +++VQ+ D Y C S + V V PP I PF F I G + C +S GD P+ ITW+K D Q + + I K SL I ++ + G Y C ASN +S ++ V+ PP F ++ Q + + VL C G P ++W K + +P +Y + +L S++ I+ ED + C A+N G+D I +I P T P L + R + + W+ G++ + RY I K ++ D V L P D+ + FS SY + R ++ DI SD+ + + S VD+ A+V +++RM G+ S E+ + T E AP PP +V + ++SQ+I+VTW +P NGVI+GY++ Y + + S K + D+E L +LKK+ Y V V AF G G S + +TT +D+P PP +V+AL+++ + ++SW P NG + Y V L + N V + ++ + K Y V A+T G+G
Sbjct: 122 VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSW-EKDTVSI------TPENRFFITSHGGLYISDVQKEDALSTYRCITQHKYSGETRQSNGA-RLSVTDP-AESIPTI-----LDGFHSQEVWTGHSVELPCAASGYPIPAIRWLK-----DGRPLPADSRWAKRITG-LTISDLRTEDSGTYICEVTNTFGSAEANGILTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPGEAISIRGLSNETLLISSAQKSHSGAYQCFATRKAQTAQDFAIIVLED--GTPRIVSSFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPASI--GQLLYIPCVVSSGDMPI--------------------------------RITWRK-------------DGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMW----KHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKAMFLTVKIPAMITSHPNTTIAIKGHPKELNCTARGERPIIIRWE---KGDTVIDPDRVMRYAIATK-------DNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASV--YSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQN-VTTTRERVELRGMEKFTNYSVQVLAYTQAGDG 1176 HSP 3 Score: 104.375 bits (259), Expect = 9.792e-21 Identity = 147/617 (23.82%), Postives = 231/617 (37.44%), Query Frame = 0
Query: 362 IAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD-------RVKQVGGTLII-------KEAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKNGEPVG-------HTETTLRINSVKKEDR-GMYQCFVRNDQESAQATGELKL--GGRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLP--MKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTV--YRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVME--PPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWK---KAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCV 932
+ V CPA G P RWY L DD R GTL + + + D+ Y C N+ G ++ P +V VE ++ + G A FKC + V V W K+ + + L I+ V+KED Y+C ++ + +GE + G R DP P + F + G V L C A G P P ++W G +D S ++ L IS RT+ GTY C+ ++ G + L V +V + P +K G ++ ++C + G P ++ W ++ + + ++ N TL IS+ Q K + Y C A D + V+E P IV SF + V+N G+ +MC+ A G P P +TW + VV + R N Y D + ++ + I+ G G Y C A N +G A+I V+ PPS R TA+ +T++ C G I W + L N R+ E+G L +++ E L + +
Sbjct: 43 VVVPCPAAGSPSAALRWY----------LATGDDIYDVPHIRHVHANGTLQLFPFSPSAFNSFIHDN-DYFCTAENAAGKIRSPNIRIKAVFREPYTVRVEDQRSM--RGNVAVFKCLIPSSVQEYVSVVSWEKDTVSITPENRFFITSHGGLYISDVQKEDALSTYRCITQH-----KYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWTGHSVELPCAASGYPIPAIRWLKDGRPLPAD---------SRWAKRITGLTISDLRTEDSGTYICEVTNTFGSAEANGILTVIDPLHV-TLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPGEAISIRGLSNETLLISSAQ-KSHSGAYQCFATRKA--QTAQDFAIIVLEDGTPRIVS-SFSEKVVNPGEQFSLMCA---------------------------------AKGAPPPTVTWALDDEPVVRDGSHR--TNQYTMSDGTTISHMNVTG-----PQIRDG--GVYRCTARNSVGSAEYQARINVRGPPSIR-AMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNH------RQVVFENGTLKLTDVQKGMDEGEYLCSVL 578 HSP 4 Score: 80.4925 bits (197), Expect = 1.571e-13 Identity = 93/411 (22.63%), Postives = 154/411 (37.47%), Query Frame = 0
Query: 543 VSLKCVAKGDPAPEVKWFI----------YGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGA---PYVRKMLPMKVVAGKSMFVTC----PVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSD--LTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVAT 934
V + C A G P+ ++W++ + ++G LQ+ F+ + + N Y C A + G + S + + PY ++ + + G C V Y +S V+WEKD + +R + +G L IS+VQ+++ STY C+ ++ R ++V +P +P I +G +Q + WT G ++ C A G+P P I W K RP P D R K I G L I +++ + G Y+C+ +N G A + V P + + I +L C G I W N + + +IR S E T+ I Q+ S + C AT
Sbjct: 43 VVVPCPAAGSPSAALRWYLATGDDIYDVPHIRHVHANGTLQLFPFSPSAFNSFIHDN----------DYFCTAENAAGKI-RSPNIRIKAVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEY-VSVVSWEKDTVSITPENRFFITSHGGLYISDVQKEDALSTYRCITQHKYSGETRQSNGARLSVTDPAESIP------TILDGFHSQEV--------------WT----------GHSVELPCAASGYPIPAIRWLK------DGRPLPAD--------SRWAKRITG-LTISDLRTEDSGTYICEVTNTFGSAEANGILTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPG--EAISIRGLSNE-----TLLISSAQKSHSGAYQCFAT 389 HSP 5 Score: 59.6918 bits (143), Expect = 2.809e-7 Identity = 44/133 (33.08%), Postives = 59/133 (44.36%), Query Frame = 0
Query: 1264 VTAHTTIGEGSPSIKVTLS---PTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDT 1393
+T H GE S LS P IP + F V V+LPC A G P P + W G+P+P + R + G L I+ + ED+G Y+C V N +G L V DP VT+T + T
Sbjct: 199 ITQHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEV-WTGHSVELPCAASGYPIPAIRWLKDGRPLPADSRWAKRITG-LTISDLRTEDSGTYICEVTNTFGSAEANGILTV---IDPLHVTLTPKKLKT 326
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|116918|sp|P12960.1|CNTN1_MOUSE (RecName: Full=Contactin-1; AltName: Full=Neural cell surface protein F3; Flags: Precursor) HSP 1 Score: 209.92 bits (533), Expect = 1.061e-53 Identity = 236/972 (24.28%), Postives = 385/972 (39.61%), Query Frame = 0
Query: 355 QKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEA-KVDDSGKYLCMVNNSVGG-ESVETVLTV--TAPLSVEVEPKQQVVDYGRSATFKCH--YDGNPVKSVYWLKNGEPV----------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGEL-------KLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEG-YSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQF--AQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGI--LWNMNNKRLDTNVDPRYTIREESQEDGMLST---ISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPI-KGTWAN-DVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPS-DTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGP--SKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+++ G +++ C A+ P PV++W NN + +DR VGG L+I K D+G Y C+ +N+ G S E L+ P E P+ +V + G+ C Y S WL N PV T L I +V+ DRG Y CFV + + + + + P + V F + T G V+L+C A G+P P+++W S + S +G V+ NI + + G YEC+A + G H A++ V P +V + +V G ++ C G PI ++ W K+G Y G L + +V E+A Y C+A N G A ++L + L P + + P K+ A+G I+CK PKP+ +W K ++ ++ R + DGSL I NI + + G Y C A N G ++ + + P + + EN +QC A + + + +W+ N +D N + + Q + ML + I+ Q + + +TC A + S +L+++ P P GL++ D +V L+W + +S +++Y I+ K I W + D ++ G+ A L P Y FRVVA N +G PS + I+T AP+ P D+ G G + E + +TW+ G GY V + P + W + N + T + T + V+V AF N GDG S V + QD P P+ V +S I V W++ E KI++ ++ A +V + + S +++NL +Y V A + G G PS V + T + P
Sbjct: 54 EESLEGKVSLNCRARASPFPVYKW-----RMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVKVKE-GKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI------STSGAVLKIFNI---QLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCIATGKPIPTIRWLKNGYS---------YHKGELRLYDVTF-ENAGMYQCIAENAYGSIYANAELKILA-----------------------------------LAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGT--------------EWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHI---HYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVG-----------GGGGTNRE--------------------------LTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDET-MTPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLE---KIVESYQIRYWAGHDKEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCG-PSSDVIETFTRKAP 906 HSP 2 Score: 148.288 bits (373), Expect = 1.818e-34 Identity = 201/906 (22.19%), Postives = 335/906 (36.98%), Query Frame = 0
Query: 358 QGGNIAVTC-PAQGYPIPV-FRWYKFMESNNNKKLVALDDR--VKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVL----------TVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMK----VVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEIT--WK-KAVVNNLQMRPTPNDYQDFDASNDRNIKI-IDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSAL---------FTCVATNAFGSDDTSI--NLIIQEKPE---TPYGLKVVDKTGRTVKLSWQAP----YNGNSNLTRYVIEFKPIKG------TWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQY 1211
+G + + C P +P + +RW N + +D R V Q G L I + D G Y C V++ +SV + T P + V+ K G++ T +C GNPV + W K EP+ T L+I +++ ED G+Y+C N + + + + PE+V + G + C+A G P P ++W G ++ G+ L + + G Y+C A + G + +A+L + +M PMK G + + C P +W K L + R ++ +G+L I+N+ R D YTC A N+ G A S T+ + P I+ + P + G +A + C A P ++T W V + T YQ RN + +G L+I+N + + G Y C A + SA A + V+ PP R + I +V ++G N+ + TI + +D I+ A+ F VATN G+ + SI N I + P + T R + ++W AP Y+ +N Y++ FKP G T N V D+TM P+T++ +V A N+ G GP S ++++A+ AP++ P EV + LSS I V W +++ Y++ Y + R S + A L +L T Y ++V A + G G S+V+ + T + P P + + S +++W +
Sbjct: 150 EGKGMVLLCDPPYHFPDDLSYRWLL----NEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAF---PEWVEHINDTEVDIGSDLYWPCIATGKPIPTIRWLKNG-------------YSYHKGE----LRLYDVTFENAGMYQCIAENAYGSIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRN-DGGIYTCFAENNRG-KANSTGTLVITNPTRII----------------------------------LAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQ-------RNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIED--IRATSVALTWSRGSD--------NHSPISKYTIQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGTNRELTITW-APLSREYHYGNNFG-YIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMT------PSTAFQVKVKAFNN-------------------------------------KGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKH----VLEKIVESYQIRYWAGHDKEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSDVIETFTRKAPPSQPPRIISSVRSGSRYIITWDH 929 HSP 3 Score: 102.449 bits (254), Expect = 2.394e-20 Identity = 112/436 (25.69%), Postives = 167/436 (38.30%), Query Frame = 0
Query: 288 KYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA-PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNV-NGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVT--WEKDGRQLPFNDRQT---------VYRNGTLAISNVQRKEDASTYTCVARND-EGYSARSDLTV 709
++V +G L I NV D Y C ++ S + I E P +V+ G N+ + C A G P+P RW K +E + + G L I +++D G Y C N G + + + V A P VE VD G + C G P+ ++ WLKNG + + LR+ V E+ GMYQC N S A ELK+ E + G V ++C K P P+ W S+ V ++G L I+ GG Y C A + G + + L + N + + + G++ + C + P +T W +G + FN T + NG L I N Q K A YTC A+ + SA +DL V
Sbjct: 187 RFVSQTNGNLYIANVESSDR-GNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPA-DIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEP------MPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVE-HINDTEVDIGSDLYWPCIATGKPIPTIRWLKNG--YSYHKGELRLYDVTFENAGMYQCIAENAYGSIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSW----SKGTEWLVNSSRILIWEDGS----LEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKH-AGRYTCTAQTIVDNSSASADLVV 602
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|55976372|sp|Q69Z26.2|CNTN4_MOUSE (RecName: Full=Contactin-4; AltName: Full=Brain-derived immunoglobulin superfamily protein 2; Short=BIG-2; Flags: Precursor) HSP 1 Score: 209.149 bits (531), Expect = 2.203e-53 Identity = 242/961 (25.18%), Postives = 373/961 (38.81%), Query Frame = 0
Query: 362 IAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKE-AKVDDSGKYLCMVNNSVGG-ESVETVLTVTAPLSVEVEPKQQV-VDYGRSATFKCH---YDGNPVKSVYWLKNGEP--------VGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGE-----LK---LGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGIL--WNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFK-PIKGTW-ANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGP--SKTWY---DPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKS-EVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPN-GKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+ ++C +G P P RW + N + +D R V G+L+I K D+G Y C+ NS G S E L + + + V V G+ C + G S W+ N P V L I V+K D G Y C V N + + G L+ + G ++P V + V + G V L+C A G+P P + W A+ + + + NG L I + + G+YEC A + G +L P +V+ + + V +S+F C G P + W K+G L DR + GTL I+ V DA Y CVA N G S + E P F + ++ +V G + I+CK P+P TW+K ++ N+R DG+L I N+ K + G Y C A+N G S+ + V+ P + + + E+ VL C+ + + I+ W N +D + D + R Q+ + I+ Q + + + C+ + + +LI++ P P + + + T T +LSW+ + +S +T YVI+ + P W A + LV G A V L P Y FR VA N IG+ PS P + R T E P PA V S + +TW + P NG GY V + P W S ++ NE S++ ++ + V+V F N G+G S L + E++ PP+S+ A ++S I V W P N G+I Y V D + A K V Q S ++ NL A Y V A+ + G G S T++ T R P
Sbjct: 46 VKLSCEVKGNPKPHIRW----KINGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGE--LSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILW----RRADGKPIARKARRHKSNG----ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITIVNL-SDAGMYQCVAENKHGVIFSSAELSVIAESP-----DFSRTLLKRVTLVKV---------------------------GGEVVIECKPKASPRPVYTWRKG--------------REILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSA--GDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSR--------------PSEKR----------------------RTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLASADASRYVFRNE----SVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPIGKNRGRIQGYEVKYWRHDDKEENAKKIRTVGN-QTSTKITNLKGSALYHLSVKAYNSAGTGPSS--ATVNVTTRKP 899 HSP 2 Score: 147.902 bits (372), Expect = 2.795e-34 Identity = 204/873 (23.37%), Postives = 335/873 (38.37%), Query Frame = 0
Query: 394 DDR--VKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSV-------EVEPKQQV-------VDYGRSATFKCHYDGNPVKSVYWLK-NGEPVGH------TETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQV--GSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNG-APYVRKMLPMKVV---AGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVT-----VMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPP----SFEIKKRTQ-TALIS-------ENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFG----SDDTSINLIIQEKPE-TPYGLKVVDKTGRTVKLSWQA--PYNGNSNLTRYVIEFKPI-KGTWANDVDHVLVPGDQTMAGVF---SLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSW 1209
D+R V Q G L I + + D G Y C+V N+V V L PL + E EPK +V + G + +C GNPV ++ W + +G+P+ + L I + ++ED G Y+C N + A G+L + P +V + + V +C A G P P +W G + +Q+ G+ N ++ +N+S A G Y+C A +K G++ SA+L+V +P + L +V G + + C P TW K L N+R T+ +G L I NV K DA +YTC+A N G ++ + + VM PP+ + + G+ ++ + C ++ + WT + ID DG D+ + D G L+I+NI+ + G Y+C + +S A + V+ PP + I + T TA +S + + + P + W N D DG T ++ F VA N G S + + PE TP + + + ++W+ N YV+ F+P K W + VL D + VF S+RP + + +V N+ G S T + +AEE P T+PPA + +LS+ I+V W+S P+ G I+GY+V Y + + + V ++T+LK Y + V A+ + G G S + TT + P P S+ I+++W
Sbjct: 167 DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKV---LGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTF---YAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLN------ITIVNLSDA-----GMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVT-KSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIV-------LPCQVTHDHSLDIVFTWTF----------NGHLIDFDKDG-----------------------DHFERVGGQDS-----AGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTVPDL-------------VDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPHGKMIW---MLTVLASADASRY-VFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEP-------------------------------------TKPPASIFARSLSATDIEVFWAS-PIGKNRGRIQGYEVKYWRHDDKEENAKKIRTVGNQTSTKITNLKGSALYHLSVKAYNSAGTGPSSATVNVTTRKPPPSQPPGNIIWNSSDSKIILNW 921 HSP 3 Score: 90.5077 bits (223), Expect = 1.086e-16 Identity = 96/374 (25.67%), Postives = 158/374 (42.25%), Query Frame = 0
Query: 358 QGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA-PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEP------VGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTT--QPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLP---MKVVAGKSMFVTCPVA-GYPISSV-TWEKDGRQLPFNDRQTVYRN-------GTLAISNVQRKEDASTYTCVARND-EGYSARSDLTV 709
+G + + C A G P+P W + + K +A R + G L I + +D+G Y C+ NS G + LT A P V++ V S ++C +G P + WLKNG+P + + TL I V D GMYQC N ++ EL + + P+F T + G V ++C K P P W + + + S++G+ + +N++++ G+Y C A++ G S + + V V M+P M V G+S+ + C V + + V TW +G + F+ + G L I N+Q K A Y C+ + + S +DL V
Sbjct: 239 KGTTVKLECFALGNPVPTILWRR-----ADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVA-MEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA--ESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITI----SEDGN-LRIINVTKSD---AGSYTCIATNHFGTASSTGNVIVKDPTKV--MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKH-AGKYVCMVQTSVDKLSVAADLIV 593 HSP 4 Score: 62.3882 bits (150), Expect = 4.523e-8 Identity = 58/229 (25.33%), Postives = 91/229 (39.74%), Query Frame = 0
Query: 1341 GSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFG-DWNTAQ-IPFGSDEFTLDSLLCGQ----RYHLYVTAHNSIGVG-PKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAW------MDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLD--LNPATWYNLRVTAHNNAG 1554
G L I + + GKYVCMV + V +L+V GPP PPE + TDT P++ +P+ Y++ + F W +P D T + + G Y A N IG+G P T+ P V A+ + GS + + W + G Y VV ++P W L + +V + + P + + ++V NN G
Sbjct: 559 GDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPAN--VSGGGGSKSELVITWETVPEELQNGRGFGY-VVAFRPHGKMIWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKG 784 HSP 5 Score: 59.3066 bits (142), Expect = 3.323e-7 Identity = 86/372 (23.12%), Postives = 140/372 (37.63%), Query Frame = 0
Query: 202 IPSFV---ADQLEVVSWHGSDGSEIRPGQIHVVYQP-YQQEASNEYVIVGNSALFKCEV-----PSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFME-SNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCH--YDGNPVKSVYWLKNG------------EPVGHTETT--LRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTT------QPGP 541
IP+F A E V+ S G + GQ+ QP + Q ++ +V + S ++C+ P++ W+ + R + + + G L I V+ D Y+C +++ + ++A VI E P FS + GG + + C + P PV+ W K E N+++ +D G L I D+G Y C+ N G S + V P V V P V G S C +D + W NG E VG ++ L I +++ + G Y C V+ + +L + G PPE V+ + T +PGP
Sbjct: 282 IPNFQQEDAGSYECVA-ENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTY--------RWLKNGDPLLTRDR--------IQIEQGTLNITIVNLSDA-GMYQCVAENK---HGVIFSSAELSVIAE-----SPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISED------GNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGP 621
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1317167896|ref|XP_023247278.1| (Down syndrome cell adhesion molecule-like protein Dscam2 [Copidosoma floridanum]) HSP 1 Score: 1578.15 bits (4085), Expect = 0.000e+0 Identity = 800/1513 (52.88%), Postives = 1040/1513 (68.74%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSF----DRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSF---------------------------------------GKDVINEGDFAQVM--------------CSISR--GDEPL-------LRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQ-TMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEE-----APSGPPVD------------IRVAAVD----------------QHTL-------------------RMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREID--GSGSSAGDGRNPFEESLMYFLTNVN 1604
VV Q Y + + +YVI GNS + +C VPSFVAD V ++ W +G F D Q +YDGKY+VLPSGEL I++V P+DG+KTY+CRTKHRLTGET+LSAT G+LVITEP+ S +PKF ++ F+ G + + CPAQG+P+P++RWYKF++ ++ V L++RV+QV GTLII EA+V+DSGKYLC+VNNSVGGESVETVLTVTAPLS E+EP+ Q +D+GR ATF C+ GNP+K++ WLK+G+P+GH E LRI SVKK+D+GMYQCFVRNDQESAQA+ ELKLGGRF+PP+ SAF T QPGP V LKC+A G+P PE+ W + G + + QVG + + NGDVVS LNIS T GG Y+C ASSKVG HSA+LNV G P++R M +VAG+++ VTCPVAG+PI S+ WE+D R LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V VM PP ++PFS G V++ G+ ++ C++S G + L + PRW +EPTDK FAQGSDA+++CKADGFPKP++TWKKA + TP DY D N+ +I + DG+L+I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP F+IK R QTA E VLQCEA+GEKPIGILWNMNNKRLD D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+IIQE PE PYGLKV+DK+GR+V+LSW APY+GNS + RY+IE+K KG+W D+D V+VPG Q +AGVF+L+PAT+YH R+VA+N+IG S GP +V ++ ++ + PP D R+A+ D +H L ++G GPM++E HTAEG P QPP + TTL+SQ I+V+WSSPPLA+ANGVI GYK++YGPS++W+D +T++TK+++ +E L LKK+TNY++Q+LAFT+GGDGVKS + TEQD P P+++KAL MS ++ILVSW+ P +PNG I QY VY K + + P + KV Q++H++ L++K RY+FWVTA T IGEG S V L+P+ +PAKIASFDD FVA K+DVKLPC+AVG P P++ WK+RG + DR+RQLP+GSL I V + D G+Y C V N +G D VTH+LVV+ PP P+VT+T+ TT++IT+KL+ +P D P+HGY +HYKPEFGDW T QI + ++TL++L CG RY +YVTA+N+IG+G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP+LYFVVE+K +H Q+W VSN+VK GGNFVV+DL+PA+WY+LRVTAHNNAGF+VAEYEFATLT+TG TIAP RE+ G S+GD + + F+ N+N
Sbjct: 134 VVSQYYDTDVNKDYVIRGNSIVIRCVVPSFVADFVTVLSWHTDQGEEFVSHPDGEQ--DYDGKYLVLPSGELHIKDVGPEDGYKTYQCRTKHRLTGETRLSATKGRLVITEPVGSARPKFPTMADSQTFKAMLNGAMTLLCPAQGFPVPMYRWYKFIDGTTRRQPVQLNERVRQVSGTLIILEAQVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAEIEPRSQTIDFGRPATFTCNVKGNPIKTISWLKDGKPLGHEEEVLRIESVKKDDKGMYQCFVRNDQESAQASAELKLGGRFEPPQIRSAFHEETLQPGPSVFLKCIASGNPTPEITWELDGKKLSNTERFQVGQYVTVNGDVVSNLNISSIHTNDGGLYKCIASSKVGSAEHSARLNVYGLPFIRHMDKKAIVAGETLRVTCPVAGHPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERMTDQATYTCVARNAQGYSARGTLEVQVMVPPKLLPFSLGDGPLNSNQVITVPCAVIEGDQPLLLKWTFNGHSISPHSGISVLDLGERGAILSIGSVQASHAGTYTCTVSNPGGKQQLSAELIVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKKAAGD------TPGDYTDLKL-NNPDINVEDGTLMINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFDIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEIMANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIIQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYMIEYKISKGSWETDIDRVVVPGSQQNVAGVFNLKPATTYHLRIVAENEIGTSEPSDTVTIITAEEAPSGPPSSVRVDALDQHTLKVSWKPPPRDDWNGEILGYYVGYRLASSDKPYMFETVEFSKEDGKEHHLQIMNLKTYTQYSVVVQAFNKVGSGPMTEERRQHTAEGVPEQPPHDTTCTTLTSQTIRVSWSSPPLAAANGVITGYKIIYGPSESWHDENTKDTKITSSSETILHGLKKFTNYSMQILAFTSGGDGVKSAPIHCQTEQDAPEAPTAIKALVMSADSILVSWRPPSQPNGVISQYIVYTKANNTEQ---PTSQKVPPNQLTHEISGLDEKRRYDFWVTASTNIGEGQLSKIVNLAPSASVPAKIASFDDKFVATYKEDVKLPCLAVGVPAPEVTWKVRGVKLAPTDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLVVHAPPHSPQVTLTATTTNSITMKLR-PHPNDNAPIHGYTIHYKPEFGDWETVQISSIALKYTLENLWCGSRYQIYVTAYNAIGMGEPSDILNTRTKGSKPIIPEASRFIEVSTKSITLHLHAWSDGGCPMLYFVVEHKKKHQQEWNQVSNNVKPGGNFVVMDLDPASWYHLRVTAHNNAGFAVAEYEFATLTITGSTIAPARELPDVNGGDSSGD------DPMRIFMANLN 1627 HSP 2 Score: 699.123 bits (1803), Expect = 0.000e+0 Identity = 479/1316 (36.40%), Postives = 661/1316 (50.23%), Query Frame = 0
Query: 14 ILLFAQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVILGNDAL-MKCSIPSFVADQLEVVSWHGSDG-SEIRPGQIHVVYQPYQQEASNEYVIVGNSALFK----------CEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA---PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSH-SAKLNVNGAPYVRKMLPMKVVAG---KSMFVTCPVA---GYPISSVTWEKDGRQLPFNDRQTVY----RNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGD-QTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPS 1276
+L A+ ++ GP+F++EPPN++DFSN TG I CQ+RG P P I W++ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A+N +G + SRDV VRAVV Q YD V ++VI GN ++ +C +PS+V D V VL W G + P+ E D +Y++L + L +K P + + H G + + + +V A ++ + +S FK C F + +ID GT+ + N + V SG L I +D K Y C + + GE+ + L +T PL++ S + G TC +G PI W K + K + ++ V L I+ K DD G Y C V N L + P + ++ + G S KC GNP + W +G+ + +TE + L I+S+ D G+Y+C + SA+ + L + G F+ D G + + C G P + W E D VL + NG ++ N+ R TY C A + G + + ++ V P K+LP + G + +T P A G + W +G + + +V R L+I +VQ A TYTC N G S A+++ ++ PRW +EPTDK FAQGSDA+++CKADGFPKP++TWKKA + TP DY D N+ +I + DG+L+I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP F+IK R QTA E VLQCEA+GEKPIGILWNMNNKRLD D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+IIQE PE PYGLKV+DK+GR+V+LSW APY+GNS + RY+IE+K KG+W D+D V+VPG Q +AGVF+L+PAT+YH R+VA+N+IG S PSDTVTI TAEEAPSGPP +RV A+DQHTL KV+W PP NG I GY V Y + + ++ + + ++ ++ +LK YT Y+V V AF G G +E T + +P PP ++ + I VSW P NG I Y + + D K K+ + + + L K Y + A T+ G+G S
Sbjct: 26 MLALAEDESMGPIFVKEPPNRIDFSNGTGAVIECQARGNPQPDIIWIRSDGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYICLAKNPVGSIHSRDVNVRAVVSQYYDTDVNKDYVIRGNSIVIRCVVPSFVADFVTVLSWHTDQGEEFVSHPD------GEQDYDGKYLVLPSGELHIKDVGPEDGYKTYQCRTKHRLTGETRLSATKGRLVITEPVGSARPKFPTMADSQTFKAMLNGAMTLLCPAQGFPVPMYRWYKFID--GTTRRQPVQLNERVRQV---SGTLIILEAQVEDSGK-YLCVVNNSVGGESVETV----LTVTAPLSAEIEPRSQTIDF-------GRPATFTCNVKGNPIKTISWLK------DGKPLGHEEEV------LRIESVKKDDKGMYQCFVRNDQESAQASAELKLGGRFEPPQIRSAFHEETLQPGPSVFLKCIASGNPTPEITWELDGKKLSNTERFQVGQYVTVNGDVVSNLNISSIHTNDGGLYKCIASSKVGSAEHSARLNVYGL----PFIRHMDKKAIVAGETLRVTCPVAGHPIESIVW-------ERDTRVLPINRKQKVFPNGTLI-IENVE--RMTDQATYTCVARNAQGYSARGTLEVQVMVPP---KLLPFSLGDGPLNSNQVITVPCAVIEGDQPLLLKWTFNGHSISPHSGISVLDLGERGAILSIGSVQASH-AGTYTCTVSNPGGKQQLS---------------------------AELIVNVP--------PRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKKAAGD------TPGDYTDLKL-NNPDINVEDGTLMINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFDIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEIMANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIIQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYMIEYKISKGSWETDIDRVVVPGSQQNVAGVFNLKPATTYHLRIVAENEIGTSEPSDTVTIITAEEAPSGPPSSVRVDALDQHTL-------------------------------------KVSWKPPPRDDWNGEILGYYVGYRLASSDKPYMFETVEFSKEDGKEHHLQIMNLKTYTQYSVVVQAFNKVGSGPMTEERRQHTAEGVPEQPPHDTTCTTLTSQTIRVSWSSPPLAAANGVITGYKIIYGPSESWHDENTKDTKITSSSET-ILHGLKKFTNYSMQILAFTSGGDGVKS 1208
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|951557871|ref|XP_014478246.1| (PREDICTED: Down syndrome cell adhesion molecule-like protein Dscam2 [Dinoponera quadriceps]) HSP 1 Score: 1574.68 bits (4076), Expect = 0.000e+0 Identity = 809/1514 (53.43%), Postives = 1019/1514 (67.31%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSF-DRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIV-------PFSFGKDV-----INEGDFAQVMCSISRGDEPLLR-----------------------------------------------------PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQ-TMAGVFSLRPATSYHFRVVAQNDIGV----------------SGPSDTVTIETAEEAP-----SGPPVD-------------------------IRVAAVD--QHTL-------------------RMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVNLVVP 1608
VV QPY E EYVI GNSA+ KC +PS++A+ V + WI +G + DGKY+VLPSGEL IR+V P+DG+KTY+CRTKHRLTGET+LSAT G+LVITEP+ S P F+ KLS + ++++ C AQG+P PV RWYK++E ++ + LDDRV+QV GTLII+EA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL+ E+EP Q +D+GR ATF C GNP+K++ WLK+G+P+G + LRI SVKKED+GMYQCFVRNDQESAQAT ELKLGGRF+PP+ AF T QPGP + LKCVA G+P PE+ W + G + LQVG + + NGDVVS+LNIS GG Y+C A+SKVG HSA+LNV G P++R M +VAG+++ VTCPV GYPI S+ WE+D R LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V VM P I P ++G+ V I +GD M S + EP+ R PRW +EPTDK FAQGSDA+++CKADGFPKP++TWK+A + TP DY D SN +I + DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E VLQCEA+GEKPIGILWNMNNKRLDT DPRYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW APY+GNS + RYVIE+K KG+W D+D VLVPG Q +AGV++LRPAT+YH R+VA+N+IG SGP +V +E ++ PP + + +A D +H L ++G GP+S+E HTAEG P QPP + TTL+SQ I+V+W SPPL++ANGVI GYKV+YGPS TWYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGVKS + TEQD P P ++KAL MS E+IL+SW+ P +PNG I QYTVY K + + KV Q++H+ L+K+ RYEFWVTA T IGEG S VTL P+ R+PAKIASFDD F A K+DVKLPC+ VG P P++ WK+RG + +DR+RQLP+GSL I V + D G+Y C V N +G D VTH+LVV+ PP P+VT+T+ TT+++T+KL+ +P D P+HGY +HYKPEFGDW TAQI ++TL++L CG RY +YVTA+N IG G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP+LYFVVE+K +H Q+W VSN+VK GGNFVVLDL+PA+WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP RE+ D E+ + F+ N+NL VP
Sbjct: 138 VVTQPYNPEILTEYVIRGNSAILKCSIPSYIAEFVTVEAWIREDGEVYLPEDPAVGQDGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTGETRLSATKGRLVITEPVGSKAPAFAGDAKLSLLVRRANMDVSMPCNAQGHPAPVSRWYKYIEGTTRRQPIQLDDRVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAPLTAEIEPSTQTIDFGRPATFTCTVQGNPIKTISWLKDGKPLGLEDRVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTDRLQVGQYVTVNGDVVSHLNISSIHNNDGGLYKCIAASKVGSAEHSARLNVYGLPFIRHMDKKAIVAGETLRVTCPVGGYPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVAPQIAPFSISDEPANWGEAVSAVCTIVKGDLPIDM-SWALNGEPITRENHGDVSISSTGKRVSLMTIEAVSARHAGEYTCTASNAAGATSYSAILAVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKRAAGD------TPGDYTDLKLSNP-DISVEDGTLSINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPQFEIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDTKSDPRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWETDIDRVLVPGSQQNVAGVYNLRPATTYHLRIVAENEIGTSDPSDTVTIITAEEVPSGPPTSVRVEAPDQHTLKVIWKAPPREDWNGEIRGYYVGHRQSSDKPYMFETVELAKEDGKEHHLQITNLKTYTQYSVVIQAFNKVGAGPLSEECKQHTAEGVPEQPPHDTTCTTLTSQTIRVSWMSPPLSAANGVITGYKVIYGPSDTWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSAESILISWRPPSQPNGVISQYTVYTKADNAEEST---SQKVPPNQLTHEASGLDKQRRYEFWVTASTNIGEGEASKIVTLGPSVRVPAKIASFDDKFTATYKEDVKLPCLTVGVPAPEVTWKVRGAVLQPSDRLRQLPEGSLFIKEVDRADAGEYSCYVENSFGHDTVTHQLVVHAPPHSPQVTLTATTTNSLTMKLR-PHPTDNAPIHGYTIHYKPEFGDWETAQIGSAIQKYTLENLWCGSRYQIYVTAYNGIGTGDPSDILNTRTKGSKPIIPEAGRFIEVSTNSITLHLSAWSDGGCPMLYFVVEHKKKHQQEWNQVSNNVKPGGNFVVLDLDPASWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAPARELPDVNGGGND-----EDPMKMFMANLNLFVP 1634 HSP 2 Score: 696.041 bits (1795), Expect = 0.000e+0 Identity = 495/1336 (37.05%), Postives = 668/1336 (50.00%), Query Frame = 0
Query: 15 LLFAQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKE--YVILGNDALMKCSI-PSFVADQLEVVSWHGSDGSEIR----PGQIHVVYQPYQQEASNEYVIVGNSAL------------FKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQ-------QVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSH-SAKLNVNGAPYVRKMLPMKVVA-----GKSMFVTCPV--AGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRK-----------EDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGD-QTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT---WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKV 1279
++ A+ ++ GPVF++EPPN++DFSN TG + CQ+RG P P I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A + G V SRDV VRAVV Q Y+ + E+VI GN + KC IPSY+ + V V W+ G V P + VG++ Y++L + L + P + + H G E R G++ V+ +P +A G++ L C A V +I EGT+ R Q D + V SG L IR +D K Y C + + GE+ + L +T PL + + + G TC QG PI W K + K + L+DRV L I+ K +D G Y C V N ES + T L EP Q + + G S KC GNP + W +G+ + +T+ + L I+S+ D G+Y+C + SA+ + L + G F+ D G + + C G P + W E D VL + NG ++ N+ R TY C A + G + + ++ V AP ++ P + G+++ C + PI ++W +G + T +G ++IS+ ++ A YTC A N G ++ S + + V P PRW +EPTDK FAQGSDA+++CKADGFPKP++TWK+A + TP DY D SN +I + DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E VLQCEA+GEKPIGILWNMNNKRLDT DPRYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW APY+GNS + RYVIE+K KG+W D+D VLVPG Q +AGV++LRPAT+YH R+VA+N+IG S PSDTVTI TAEE PSGPP +RV A DQHTL KV W +PP NG I+GY V + S ++ + ++ ++T+LK YT Y+V + AF G G SE T + +P PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S +
Sbjct: 31 VVAAEDESMGPVFVKEPPNRVDFSNGTGAVVECQARGNPQPDIIWVRADGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYSCLARSPAGSVHSRDVNVRAVVTQPYNPEILTEYVIRGNSAILKCSIPSYIAEFVTVEAWIREDGE---------VYLPEDPAVGQDGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTG-ETRLSATKGRL-VITEPVGSKAP---AFAGDAKLSLLVRRANMDVSMPCNAQGHPAPVSRWYKYI--EGTT--RRQPIQLDDR-VRQVSGTLIIREARVEDSGK-YLCIVNNSVGGESVETV----LTVTAPLTAEIEPSTQTIDF-------GRPATFTCTVQGNPIKTISWLK------DGKPLGLEDRV------LRIESVKKEDKGMYQCFVRND--QESAQA--TAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTDRLQVGQYVTVNGDVVSHLNISSIHNNDGGLYKCIAASKVGSAEHSARLNVYGL----PFIRHMDKKAIVAGETLRVTCPVGGYPIESIVW-------ERDTRVLPINRKQKVFPNGTLI-IENVE--RMSDQATYTCVARNAQGYSARGTLEVQVMVAP---QIAPFSISDEPANWGEAVSAVCTIVKGDLPI-DMSWALNGEPI------TRENHGDVSISSTGKRVSLMTIEAVSARHAGEYTCTASNAAGATSYSAI-LAVNVP----------------------------------PRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKRAAGD------TPGDYTDLKLSNP-DISVEDGTLSINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPQFEIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDTKSDPRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWETDIDRVLVPGSQQNVAGVYNLRPATTYHLRIVAENEIGTSDPSDTVTIITAEEVPSGPPTSVRVEAPDQHTL-------------------------------------KVIWKAPPREDWNGEIRGYYVGHRQSSDKPYMFETVELAKEDGKEHHLQITNLKTYTQYSVVIQAFNKVGAGPLSEECKQHTAEGVPEQPPHDTTCTTLTSQTIRVSWMSPPLSAANGVITGYKVIYGPSDTWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVKSAPI 1215 HSP 3 Score: 82.8037 bits (203), Expect = 8.704e-12 Identity = 81/242 (33.47%), Postives = 105/242 (43.39%), Query Frame = 0
Query: 1705 YGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAG---AYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLP-PGAG---------GAQTGPNTPARHLSQTMNPRRS-----IANPGGP------MQPALYDSVNCDYEPGTYQAPQNQNFGNPYD 1921
Y Q G + + L +E+GY PPNRKLPPVPG SNYNT DRIK G G G +++T+D R Y+E+ + G G S +++I PYATFHLLG REE P+ A FQT P PG G G T + +R SQ+M PR++ + + GG P D NC E Y + Q +G PYD
Sbjct: 1666 YQQTGVGGATLDKRRSDL-RDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGTVISGTGSLRSHSTWDPRRH----MYEELSHYAPNRRCPPPPRMGSAD-----------------GLSHRGMEDEICPYATFHLLGFREEMD--PSKAMQFQTFPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSM-PRQNGRYSRVPSQGGGSGTHNVFSPEYDDPANCAPEEDQYGSQYGQ-YGAPYD 1879
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1339078582|ref|XP_023726716.1| (Down syndrome cell adhesion molecule-like protein Dscam2 isoform X20 [Cryptotermes secundus]) HSP 1 Score: 1559.66 bits (4037), Expect = 0.000e+0 Identity = 804/1486 (54.10%), Postives = 1018/1486 (68.51%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHS-NYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIA---------VTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVM-----------------------------EPPAIVPFSFGK-----------------------DVINEGDFAQVMCSI---------SRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEE----APSGPP-------------VDIRVAAVD----------------QHTLRMGQ-------------------GPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELD-RSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAP 1574
VV Q Y EA NEYVI GNSA+ KC++PSFVAD V + W+ +G + S S NYDGKY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP ++ PK S +K +GG I ++C G+P+P+FRWYKF++ K+ V LDDRVKQV GTLIIKEA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL+ +EP Q VD+GR A F C+++GNP+K + WLK+G+ + H ++ LRI SVKKED+GMYQCF+RNDQE+AQA+ ELKLGGRF+PP+ AF T QPGP V LKC+A G+P PE+ W + G + + LQVG + + NGDVVS+LNIS T GG Y+C ASSKVG V H+AKLNV G P++R M +VAG+++ VTCPVAGYPI ++ WE+DGR LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V VM +PP + +SF D + G C++ + E + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S GP V +E ++ PP V ++A+ D +H L++G+ GPMS+E +TAEG P QPP + TTL+SQ I+V+W SPPL +ANG+IKGYKVVYGPS WYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGV+S + TEQD+P PS+VKAL MS ++ILVSW+ PE+PNG + QYTVY++E ++D PK KV QMS + L KK RYEFWVTA T IGEG PS V+LSP++R+PAKIASFDD F A K+DVKLPC+AVG P P + WK++G ++DRIRQLP+GSL I V ++D G+Y C V N +G D VTH+LVV+ PP P+V++TS TT++IT+KL+ +P D P+HGY +HYKPEFGDW T Q+ + ++TL++L CG RY +YVT +N IG G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP++YFVVE+K + H +W VSN+VK GGNFVVLDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP
Sbjct: 125 VVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPTSNIAPK-------SPGKKYEGGEIMYSPAGQRVFMSCQVVGFPVPLFRWYKFVDGTMRKQAVTLDDRVKQVSGTLIIKEARVEDSGKYLCVVNNSVGGESVETVLTVTAPLAANIEPTTQTVDFGRPAVFTCNFEGNPIKMISWLKDGKSLSHEDSVLRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGLPFIRPMEKKAIVAGETLIVTCPVAGYPIETIVWERDGRVLPINRKQKVFPNGTLIIENVERLSDQATYTCVARNAQGYSARGTLEVQVMVLPRIVPFHFDVPIFAGQATQVTCLVSQGDPPLDISWSFQGTELSSQMGISTVKFDRKASALLIDPASSGHRGNYTCTVRNPAGSVNYTTSLEVHVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKLKISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVPEAPSAVKALVMSGDSILVSWKPPEQPNGIVSQYTVYVREDSAEAKDEKPKLTKVPPFQMSFEASELKKKERYEFWVTASTIIGEGQPSKSVSLSPSSRVPAKIASFDDSFSATYKEDVKLPCLAVGIPAPDIQWKVKGVAFQQDDRIRQLPEGSLFIKSVTRQDAGEYSCSVENSFGHDTVTHQLVVHAPPHSPQVSLTSMTTNSITMKLR-PHPTDTAPLHGYTVHYKPEFGDWETVQVSNQAQKYTLENLWCGSRYQVYVTGYNGIGTGDPSDILNTRTKGSKPVIPEAGRFIEVSTNSITLHLSAWSDGGCPMIYFVVEHKKKLHTEWNQVSNNVKPGGNFVVLDLDPANWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAP 1595 HSP 2 Score: 700.279 bits (1806), Expect = 0.000e+0 Identity = 487/1321 (36.87%), Postives = 665/1321 (50.34%), Query Frame = 0
Query: 19 QSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSL---KTAPN----FVVIQPFET---DVG-----KEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIH----VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA---PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSH-SAKLNVNGAPYVRKM-LPMKVVAGKSMFVTCPVA-GYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+ DT GPV+I+EPPN++DFSNTTG + C +RG P+P+I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A N++G + SRDV VRAVV Q Y E E+VI GN + KCKIPS+V D V V WV G +L T+ N ++V+ E DVG K Y L + S +L V++ S+ + PG+ + ++Y P G C+V F + ++D GT R Q D + V SG L I+ +D K Y C + + GE+ + L +T PLA+ + V G TC +G PI + W K + K ++ +D V L I+ K +D G Y C + N L + P + K++ + G S KC GNP + W +G+ + +++ + L I+S+ D G+Y+C + S + +L + G F+ + G + + C G P + W E DG VL + NG ++ N+ R TY C A + G + + ++ V P + + + AG++ VTC V+ G P ++W G +L + + IS V+ AS + R + T TV P V ++ +V + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S PSDTV I TAEEAP GPP ++V A DQH L K++W P NG I GY V Y + + ++ + + ++ ++ LK YT Y+V V AF G G SE T + IP PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S + +P
Sbjct: 22 EDDTAGPVYIREPPNRVDFSNTTGAVVECSARGNPVPEIIWVRSDGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYVCLARNSVGTIHSRDVNVRAVVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRL-VITEPTSNIAPKSPGKKYEGGEIMYSP-----------AGQRVFMSCQVVGFPVPLFRWYKFVD--GTM--RKQAVTLDDR-VKQVSGTLIIKEARVEDSGK-YLCVVNNSVGGESVETV----LTVTAPLAANIEPTTQTVDF-------GRPAVFTCNFEGNPIKMISWLK------DGKSLSHEDSV------LRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGL----PFIRPMEKKAIVAGETLIVTCPVAGYPIETIVW-------ERDGRVLPINRKQKVFPNGTLI-IENVE--RLSDQATYTCVARNAQGYSARGTLEVQVMVLPRIVPFHFDVPIFAGQATQVTCLVSQGDPPLDISWSFQGTEL----------SSQMGISTVKFDRKASALLI---DPASSGHRGNYTCTVRNPAGSVNYTTSLEV-------------------HVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKL-------------------------------------KISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVP 1210 HSP 3 Score: 124.02 bits (310), Expect = 3.236e-24 Identity = 125/328 (38.11%), Postives = 160/328 (48.78%), Query Frame = 0
Query: 1636 GTIAPPFGKDTKATQAGFPGLPDWLDLDIIVPVVATVIVICVGILVVCVALTRRKHPPPLMHPEEYAQYYGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAGAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQT-----GPNTPA----------RHLSQTM---NPRRS-IANPGGPMQ----PALYDSVNCDYEPGTYQAPQNQNFGNPYDCPEGMYGGSMVSSVGYSK 1939
GTIAPP + T Q FP +P+WLDL+I+VP+ ATV+VI VG++V+CVAL+RR P + Y N M + D +E+GY PPNRKLPPVPG SNYNT DRIK GH + ++AT+D R+ Y+E+ G+ ++P P V H A +++I PYATFHLLG REE PN A FQT P G +T GP P R SQ+M N R S +AN G P D NC E Y + Q +G PYD G G SVG ++
Sbjct: 1591 GTIAPPEQEHTSVNQY-FPWVPEWLDLNIVVPIGATVVVIIVGVVVICVALSRRSRGPEQTRLRDDVAYNQSAGGNSTMDKRRPD--LRDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGH-SGSFRSHATWDPRHPRH--MYEELSLHPPGIR--------RIPAHPGSDETVYHR---------AGMEDEICPYATFHLLGFREEMD--PNKAMQFQTFPHQNGHERTHSGTIGPMGPGGVAGNGHIHQRSGSQSMPRANGRYSRVANQNGAANFAPGPEYDDPANCAPEEDQYGSQYGQ-YGAPYDH-YGSRGSVSRRSVGSAR 1889
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1339078556|ref|XP_023726702.1| (Down syndrome cell adhesion molecule-like protein Dscam2 isoform X7 [Cryptotermes secundus]) HSP 1 Score: 1558.5 bits (4034), Expect = 0.000e+0 Identity = 810/1488 (54.44%), Postives = 1023/1488 (68.75%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHS-NYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIA---------VTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTV---------------MEPPAIV-----------PFSF-------------GKDVINEGDFAQVMCSISR-----------------GDEPL-------LRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEE----APSGPP-------------VDIRVAAVD----------------QHTLRMGQ-------------------GPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELD-RSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAP 1574
VV Q Y EA NEYVI GNSA+ KC++PSFVAD V + W+ +G + S S NYDGKY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP ++ PK S +K +GG I ++C G+P+P+FRWYKF++ K+ V LDDRVKQV GTLIIKEA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL+ +EP Q VD+GR A F C+++GNP+K + WLK+G+ + H ++ LRI SVKKED+GMYQCF+RNDQE+AQA+ ELKLGGRF+PP+ AF T QPGP V LKC+A G+P PE+ W + G + + LQVG + + NGDVVS+LNIS T GG Y+C ASSKVG V H+AKLNV G P++R M +VAG+++ VTCPVAGYPI ++ WE+DGR LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V V M P I+ P S G V+N G+ + V+ SIS G + L + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S GP V +E ++ PP V ++A+ D +H L++G+ GPMS+E +TAEG P QPP + TTL+SQ I+V+W SPPL +ANG+IKGYKVVYGPS WYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGV+S + TEQD+P PS+VKAL MS ++ILVSW+ PE+PNG + QYTVY++E ++D PK KV QMS + L KK RYEFWVTA T IGEG PS V+LSP++R+PAKIASFDD F A K+DVKLPC+AVG P P + WK++G ++DRIRQLP+GSL I V ++D G+Y C V N +G D VTH+LVV+ PP P+V++TS TT++IT+KL+ +P D P+HGY +HYKPEFGDW T Q+ + ++TL++L CG RY +YVT +N IG G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP++YFVVE+K + H +W VSN+VK GGNFVVLDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP
Sbjct: 125 VVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPTSNIAPK-------SPGKKYEGGEIMYSPAGQRVFMSCQVVGFPVPLFRWYKFVDGTMRKQAVTLDDRVKQVSGTLIIKEARVEDSGKYLCVVNNSVGGESVETVLTVTAPLAANIEPTTQTVDFGRPAVFTCNFEGNPIKMISWLKDGKSLSHEDSVLRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGLPFIRPMEKKAIVAGETLIVTCPVAGYPIETIVWERDGRVLPINRKQKVFPNGTLIIENVERLSDQATYTCVARNAQGYSARGTLEVQVMVRPALLPFSFGDRPMNPGQIITVPCGVIEGDRPISLHWTFNGKPITPRMGVTVVNLGERS-VILSISSVQAAHAGVYTCTAKNLAGTDHLSAELVVKVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKLKISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVPEAPSAVKALVMSGDSILVSWKPPEQPNGIVSQYTVYVREDSAEAKDEKPKLTKVPPFQMSFEASELKKKERYEFWVTASTIIGEGQPSKSVSLSPSSRVPAKIASFDDSFSATYKEDVKLPCLAVGIPAPDIQWKVKGVAFQQDDRIRQLPEGSLFIKSVTRQDAGEYSCSVENSFGHDTVTHQLVVHAPPHSPQVSLTSMTTNSITMKLR-PHPTDTAPLHGYTVHYKPEFGDWETVQVSNQAQKYTLENLWCGSRYQVYVTGYNGIGTGDPSDILNTRTKGSKPVIPEAGRFIEVSTNSITLHLSAWSDGGCPMIYFVVEHKKKLHTEWNQVSNNVKPGGNFVVLDLDPANWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAP 1596 HSP 2 Score: 696.812 bits (1797), Expect = 0.000e+0 Identity = 495/1332 (37.16%), Postives = 669/1332 (50.23%), Query Frame = 0
Query: 19 QSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSL---KTAPN----FVVIQPFET---DVG-----KEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIH----VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA---PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVR-KMLPMK-----VVAGKSMFVTCPV--AGYPISSVTWEKDGRQLPFNDRQTVY------RNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+ DT GPV+I+EPPN++DFSNTTG + C +RG P+P+I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A N++G + SRDV VRAVV Q Y E E+VI GN + KCKIPS+V D V V WV G +L T+ N ++V+ E DVG K Y L + S +L V++ S+ + PG+ + ++Y P G C+V F + ++D GT R Q D + V SG L I+ +D K Y C + + GE+ + L +T PLA+ + V G TC +G PI + W K + K ++ +D V L I+ K +D G Y C + N L + P + K++ + G S KC GNP + W +G+ + +++ + L I+S+ D G+Y+C + S + +L + G F+ + G + + C G P + W E DG VL + NG ++ N+ R TY C A + G +SA+ + VR +LP + G+ + V C V PI S+ W +G+ P R V R+ L+IS+VQ A YTC A+N G S A+++ + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S PSDTV I TAEEAP GPP ++V A DQH L K++W P NG I GY V Y + + ++ + + ++ ++ LK YT Y+V V AF G G SE T + IP PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S + +P
Sbjct: 22 EDDTAGPVYIREPPNRVDFSNTTGAVVECSARGNPVPEIIWVRSDGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYVCLARNSVGTIHSRDVNVRAVVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRL-VITEPTSNIAPKSPGKKYEGGEIMYSP-----------AGQRVFMSCQVVGFPVPLFRWYKFVD--GTM--RKQAVTLDDR-VKQVSGTLIIKEARVEDSGK-YLCVVNNSVGGESVETV----LTVTAPLAANIEPTTQTVDF-------GRPAVFTCNFEGNPIKMISWLK------DGKSLSHEDSV------LRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGL----PFIRPMEKKAIVAGETLIVTCPVAGYPIETIVW-------ERDGRVLPINRKQKVFPNGTLI-IENVE--RLSDQATYTCVARNAQG---YSARGTLEVQVMVRPALLPFSFGDRPMNPGQIITVPCGVIEGDRPI-SLHWTFNGK--PITPRMGVTVVNLGERSVILSISSVQAAH-AGVYTCTAKNLAGTDHLS---------------------------AELVVKVP--------PRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKL-------------------------------------KISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVP 1211 HSP 3 Score: 124.02 bits (310), Expect = 3.104e-24 Identity = 125/328 (38.11%), Postives = 160/328 (48.78%), Query Frame = 0
Query: 1636 GTIAPPFGKDTKATQAGFPGLPDWLDLDIIVPVVATVIVICVGILVVCVALTRRKHPPPLMHPEEYAQYYGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAGAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQT-----GPNTPA----------RHLSQTM---NPRRS-IANPGGPMQ----PALYDSVNCDYEPGTYQAPQNQNFGNPYDCPEGMYGGSMVSSVGYSK 1939
GTIAPP + T Q FP +P+WLDL+I+VP+ ATV+VI VG++V+CVAL+RR P + Y N M + D +E+GY PPNRKLPPVPG SNYNT DRIK GH + ++AT+D R+ Y+E+ G+ ++P P V H A +++I PYATFHLLG REE PN A FQT P G +T GP P R SQ+M N R S +AN G P D NC E Y + Q +G PYD G G SVG ++
Sbjct: 1592 GTIAPPEQEHTSVNQY-FPWVPEWLDLNIVVPIGATVVVIIVGVVVICVALSRRSRGPEQTRLRDDVAYNQSAGGNSTMDKRRPD--LRDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGH-SGSFRSHATWDPRHPRH--MYEELSLHPPGIR--------RIPAHPGSDETVYHR---------AGMEDEICPYATFHLLGFREEMD--PNKAMQFQTFPHQNGHERTHSGTIGPMGPGGVAGNGHIHQRSGSQSMPRANGRYSRVANQNGAANFAPGPEYDDPANCAPEEDQYGSQYGQ-YGAPYDH-YGSRGSVSRRSVGSAR 1890
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1153817636|ref|XP_020284812.1| (Down syndrome cell adhesion molecule-like protein Dscam2 isoform X40 [Pseudomyrmex gracilis]) HSP 1 Score: 1556.58 bits (4029), Expect = 0.000e+0 Identity = 804/1511 (53.21%), Postives = 1015/1511 (67.17%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIV-------PFSFGKDV-----------------------INEGDFAQVMCSISRGDEPL---------------------------------LRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQ-TMAGVFSLR-----------------------------------PATSYHFRVVAQNDIGVS-------------------------GPSDTVTIETAEEAPSGPPVDI-------RVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVNLVVP 1608
VV Q Y + + EY I GNSA+ KC VPSFVAD V ++ W +G F ++DGKY+VLPSGEL IR+V P+DG+KTY+CRTKHRLTGET+LSAT G+LVITEP+ KPKFS+I K F+ + + + CPAQ YP+PVF+WYKF+E + ++ V L++RV+QV GTLII+EA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL E+EP Q +D+GR ATF C GNP+K++ WLK+G+P+G + LRI SVKKED+GMYQCFVRNDQESAQAT ELKLGGRF+PP+ AF T QPGP + LKCVA G+P PE+ W + G + LQVG + + NGDVVS+LNIS T GG Y+C A+SKVG HSA+LNV G P++R M +VAG+++ VTCPVAGYPI ++ WE+D R LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V VM P I+ P S+G+ V I+ D V+ S +R + L + PRW +EPTDK FAQGSDA+++CKADGFPKP++TWK+A + TP DY D SN +I + DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E VLQCEA+GEKPIGILWNMNNKRLDT DPRYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW APY+GNS + RY IE+K KG+W D+D VLVPG Q +AGV++LR P TS + Q+ + V+ P + T+E ++E P + I + V Q ++G GPMS+E HTAEG P QPP + TTL+SQ I+V+W SPPL++ANGVI GYKV+YGPS TWYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGVKS + TEQD P P ++KAL MS E+IL+SW+ P +PNG I QYTVY K D + + P + KV Q++H+ L+K+ +YEFWVTA T IGEG S VTLSP+ R+PAKIASFDD F A K+DVKLPC+ VG P P++ WK+RG + +DR+RQLP+GSL I V + D G+Y C V N +G D VTH+LVV+ PP P+V +TS TT++IT+K + + D P+HGY +HYKPEFGDW T Q +TLD+L CG RY +YVTA+N IG G S L TKG +P +PEA +F+EVS S+TLHLNAW DGGCP+LYFVVE+K +H Q+W VSN+VK GNF+V+DL+PA+WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP REI + G+ +P + F+TN+NLVVP
Sbjct: 138 VVAQYYDTDVNKEYAIRGNSAILKCVVPSFVADFVKVLSWHTDQGEEF--VPGDDFDGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTGETRLSATKGRLVITEPVGFAKPKFSTIDKSRTFEIAEDRGLTLQCPAQAYPVPVFKWYKFIEGTSRRQPVQLNERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAPLIAEIEPSVQTIDFGRPATFTCTVQGNPIKTISWLKDGKPLGLEDRVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFTEETLQPGPSMFLKCVASGNPTPEISWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSIHTNDGGQYKCIAASKVGSAEHSARLNVFGLPFIRHMDKKAIVAGETLRVTCPVAGYPIDTIVWERDTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVAPQILPFDFGDEPASWGELVSVTCSVAKGDQPIEISWAFNGTPIDTSDSDVVIGSTNRKNSVLTIESVAARHAGDYTCTASNRVGATAHTAHLSVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKRAAGD------TPGDYTDLKLSNP-DISVEDGTLSINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPQFEIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDTKSDPRYTIREEILANGVLSDLSIKRTERTDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYTIEYKISKGSWETDMDKVLVPGSQQNVAGVYNLRPATTYHLRIVAENEIGMSDPSDTVTIITAEEVPSGPPTSVKVDALDQHTLKVTWKPPPREDWNGEILGYYVGYRQFADKPYNFETVEFSKEDPKEHHLQITNLKTYTQYGVVVQAFNKVGSGPMSEERKQHTAEGVPEQPPHDTTCTTLTSQTIRVSWVSPPLSTANGVITGYKVIYGPSDTWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSAESILISWRPPSQPNGVISQYTVYAK-ADNAEE--PTSQKVPPNQLTHEASGLDKQLKYEFWVTASTNIGEGEASKIVTLSPSVRVPAKIASFDDKFTATYKEDVKLPCLTVGVPAPEVTWKVRGATLQPSDRLRQLPEGSLFIKEVDRADAGEYSCYVENSFGHDTVTHQLVVHAPPHSPQVALTSTTTNSITMKFR-PHSNDNAPIHGYTIHYKPEFGDWETHQTSSSVQVYTLDNLWCGSRYQIYVTAYNGIGTGDPSDILNTRTKGSKPVIPEAAKFIEVSTNSITLHLNAWGDGGCPMLYFVVEHKKKHQQEWNQVSNNVKPNGNFIVMDLDPASWYSLRVTAHNNAGFAVAEYEFATLTVTGGTIAPAREIPDVNNGGGNDEDP----IKIFMTNLNLVVP 1631 HSP 2 Score: 709.138 bits (1829), Expect = 0.000e+0 Identity = 507/1326 (38.24%), Postives = 663/1326 (50.00%), Query Frame = 0
Query: 18 AQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIR----PGQIHVVYQPY--------QQEASNEYVIVGNSAL-FKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPL-ASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQ-------QVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSH-SAKLNVNGAPYVRKMLPMK-----VVAGKSMFVTCPVA--GYPISSVTWEKDGRQLPFNDRQTVY-----RNGTLAISNVQRKEDASTYTCVARNDEGYSARS-DLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGD-QTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNE------AELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKV 1279
A+ ++ GPVF++EPPN++DFSN TG + CQ+RG P P I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A + G V SRDV VRAVV Q YD V E+ I GN + KC +PS+V D V+VL W G +F GK V+ + ++ P + + H G E R G++ V+ +P + S + I + L +C ++ V +I EGTS + N + V SG L IR +D K Y C + + GE+ + L +T PL A +P +I G TC QG PI W K + K + L+DRV L I+ K +D G Y C V N ES + T L EP Q + + G S KC GNP + W +G+ + +TE + L I+S+ D G Y+C + SA+ + L + G F+ D G + + C G P + W E D VL + NG ++ N+ R TY C A + G + + ++ V AP ++LP G+ + VTC VA PI ++W +G + +D V +N L I +V + A YTC A N G +A + L+V V PRW +EPTDK FAQGSDA+++CKADGFPKP++TWK+A + TP DY D SN +I + DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E VLQCEA+GEKPIGILWNMNNKRLDT DPRYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW APY+GNS + RY IE+K KG+W D+D VLVPG Q +AGV++LRPAT+YH R+VA+N+IG+S PSDTVTI TAEE PSGPP ++V A+DQHTL KVTW PP NG I GY V Y + + D V E ++T+LK YT Y V V AF G G SE T + +P PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S +
Sbjct: 34 AEDESMGPVFVKEPPNRVDFSNGTGAVVECQARGNPQPDIIWVRADGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYSCLARSPAGSVHSRDVNVRAVVAQYYDTDVNKEYAIRGNSAILKCVVPSFVADFVKVLSWHTDQGEEFVPGDDF---------DGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTG-ETRLSATKGRL-VITEPVGFAKPKFSTIDKSRTFEIAEDRGLTLQCPAQAYPVPVFKWYKFI--EGTSRRQPVQLNERVRQV---SGTLIIREARVEDSGK-YLCIVNNSVGGESVETV----LTVTAPLIAEIEPSVQTI--------DFGRPATFTCTVQGNPIKTISWLK------DGKPLGLEDRV------LRIESVKKEDKGMYQCFVRND--QESAQA--TAELKLGGRFEPPQIRQAFTEETLQPGPSMFLKCVASGNPTPEISWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSIHTNDGGQYKCIAASKVGSAEHSARLNVFGL----PFIRHMDKKAIVAGETLRVTCPVAGYPIDTIVW-------ERDTRVLPINRKQKVFPNGTLI-IENVE--RMSDQATYTCVARNAQGYSARGTLEVQVMVAP---QILPFDFGDEPASWGELVSVTCSVAKGDQPI-EISWAFNGTPIDTSDSDVVIGSTNRKNSVLTIESVAARH-AGDYTCTASNRVGATAHTAHLSVNVP------------------------------------PRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKRAAGD------TPGDYTDLKLSNP-DISVEDGTLSINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPQFEIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDTKSDPRYTIREEILANGVLSDLSIKRTERTDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYTIEYKISKGSWETDMDKVLVPGSQQNVAGVYNLRPATTYHLRIVAENEIGMSDPSDTVTIITAEEVPSGPPTSVKVDALDQHTL-------------------------------------KVTWKPPPREDWNGEILGYYVGY---RQFADKPYNFETVEFSKEDPKEHHLQITNLKTYTQYGVVVQAFNKVGSGPMSEERKQHTAEGVPEQPPHDTTCTTLTSQTIRVSWVSPPLSTANGVITGYKVIYGPSDTWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVKSAPI 1211 HSP 3 Score: 80.8777 bits (198), Expect = 3.604e-11 Identity = 80/239 (33.47%), Postives = 104/239 (43.51%), Query Frame = 0
Query: 1705 YGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAGAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLP-PGAG---------GAQTGPNTPARHLSQTMNPRRS-----IANPGGP------MQPALYDSVNCDYEPGTYQAPQNQNFGNPYD 1921
Y Q G + + L +E+GY PPNRKLPPVPG SNYNT DRIK G T +++T+D R Y+E+ + G G S +++I PYATFHLLG REE P+ A FQT P PG G G T + +R SQ+M PR++ + + GG P D NC E Y + Q +G PYD
Sbjct: 1663 YQQTGVGGATLDKRRSDL-RDELGYIAPPNRKLPPVPG--SNYNTCDRIKRG-GTGSLRSHSTWDPRRH----MYEELSHYAPNRRCPPPPRMGSTD-----------------GLSHRGMEDEICPYATFHLLGFREEMD--PSKAMQFQTFPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSM-PRQNGRYSRVPSQGGGSGTHNVFSPEYDDPANCAPEEDQYGSQYGQ-YGAPYD 1872
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1339078562|ref|XP_023726706.1| (Down syndrome cell adhesion molecule-like protein Dscam2 isoform X10 [Cryptotermes secundus]) HSP 1 Score: 1541.94 bits (3991), Expect = 0.000e+0 Identity = 797/1486 (53.63%), Postives = 1016/1486 (68.37%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHS-NYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIA---------VTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDE-----------------------------GYSARSDLTVTVMEPPAIVPFSF----------------GK-------DVINEGDFAQVMCSI---------SRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEE----APSGPP-------------VDIRVAAVD----------------QHTLRMGQ-------------------GPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELD-RSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAP 1574
VV Q Y EA NEYVI GNSA+ KC++PSFVAD V + W+ +G + S S NYDGKY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP ++ PK S +K +GG I ++C G+P+P+FRWYKF++ K+ V LDDRVKQV GTLIIKEA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL+ +EP Q VD+GR A F C+++GNP+K + WLK+G+ + H ++ LRI SVKKED+GMYQCF+RNDQE+AQA+ ELKLGGRF+PP+ AF T QPGP V LKC+A G+P PE+ W + G + + LQVG + + NGDVVS+LNIS T GG Y+C ASSKVG V H+AKLNV G P++R M +VAG+++ VTCPVAGYPI ++ WE+DGR LP N +Q V+ NGTL I NV+R D +TYTCVARN + G + + V+ +PP + +SF G+ D + G C++ + + + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S GP V +E ++ PP V ++A+ D +H L++G+ GPMS+E +TAEG P QPP + TTL+SQ I+V+W SPPL +ANG+IKGYKVVYGPS WYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGV+S + TEQD+P PS+VKAL MS ++ILVSW+ PE+PNG + QYTVY++E ++D PK KV QMS + L KK RYEFWVTA T IGEG PS V+LSP++R+PAKIASFDD F A K+DVKLPC+AVG P P + WK++G ++DRIRQLP+GSL I V ++D G+Y C V N +G D VTH+LVV+ PP P+V++TS TT++IT+KL+ +P D P+HGY +HYKPEFGDW T Q+ + ++TL++L CG RY +YVT +N IG G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP++YFVVE+K + H +W VSN+VK GGNFVVLDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP
Sbjct: 125 VVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPTSNIAPK-------SPGKKYEGGEIMYSPAGQRVFMSCQVVGFPVPLFRWYKFVDGTMRKQAVTLDDRVKQVSGTLIIKEARVEDSGKYLCVVNNSVGGESVETVLTVTAPLAANIEPTTQTVDFGRPAVFTCNFEGNPIKMISWLKDGKSLSHEDSVLRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGLPFIRPMEKKAIVAGETLIVTCPVAGYPIETIVWERDGRVLPINRKQKVFPNGTLIIENVERLSDQATYTCVARNAQGYSARGTLEVQVMVLPRIVPFHFDVPIFAGQATQVTCLVSEGDPPLDITWSFQGTELSSQMGISTAKFGRKTSVLVIDPASSGHRGNYTCTVRNPAGYVNYTASLDVHVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKLKISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVPEAPSAVKALVMSGDSILVSWKPPEQPNGIVSQYTVYVREDSAEAKDEKPKLTKVPPFQMSFEASELKKKERYEFWVTASTIIGEGQPSKSVSLSPSSRVPAKIASFDDSFSATYKEDVKLPCLAVGIPAPDIQWKVKGVAFQQDDRIRQLPEGSLFIKSVTRQDAGEYSCSVENSFGHDTVTHQLVVHAPPHSPQVSLTSMTTNSITMKLR-PHPTDTAPLHGYTVHYKPEFGDWETVQVSNQAQKYTLENLWCGSRYQVYVTGYNGIGTGDPSDILNTRTKGSKPVIPEAGRFIEVSTNSITLHLSAWSDGGCPMIYFVVEHKKKLHTEWNQVSNNVKPGGNFVVLDLDPANWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAP 1595 HSP 2 Score: 699.508 bits (1804), Expect = 0.000e+0 Identity = 487/1321 (36.87%), Postives = 663/1321 (50.19%), Query Frame = 0
Query: 19 QSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSL---KTAPN----FVVIQPFET---DVG-----KEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIH----VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA---PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSH-SAKLNVNGAPYVRKM-LPMKVVAGKSMFVTCPVA-GYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+ DT GPV+I+EPPN++DFSNTTG + C +RG P+P+I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A N++G + SRDV VRAVV Q Y E E+VI GN + KCKIPS+V D V V WV G +L T+ N ++V+ E DVG K Y L + S +L V++ S+ + PG+ + ++Y P G C+V F + ++D GT R Q D + V SG L I+ +D K Y C + + GE+ + L +T PLA+ + V G TC +G PI + W K + K ++ +D V L I+ K +D G Y C + N L + P + K++ + G S KC GNP + W +G+ + +++ + L I+S+ D G+Y+C + S + +L + G F+ + G + + C G P + W E DG VL + NG ++ N+ R TY C A + G + + ++ V P + + + AG++ VTC V+ G P +TW G +L + + IS + S + R + T TV P V ++ DV + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S PSDTV I TAEEAP GPP ++V A DQH L K++W P NG I GY V Y + + ++ + + ++ ++ LK YT Y+V V AF G G SE T + IP PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S + +P
Sbjct: 22 EDDTAGPVYIREPPNRVDFSNTTGAVVECSARGNPVPEIIWVRSDGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYVCLARNSVGTIHSRDVNVRAVVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRL-VITEPTSNIAPKSPGKKYEGGEIMYSP-----------AGQRVFMSCQVVGFPVPLFRWYKFVD--GTM--RKQAVTLDDR-VKQVSGTLIIKEARVEDSGK-YLCVVNNSVGGESVETV----LTVTAPLAANIEPTTQTVDF-------GRPAVFTCNFEGNPIKMISWLK------DGKSLSHEDSV------LRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGL----PFIRPMEKKAIVAGETLIVTCPVAGYPIETIVW-------ERDGRVLPINRKQKVFPNGTLI-IENVE--RLSDQATYTCVARNAQGYSARGTLEVQVMVLPRIVPFHFDVPIFAGQATQVTCLVSEGDPPLDITWSFQGTEL----------SSQMGISTAKFGRKTSVLVI---DPASSGHRGNYTCTVRNPAGYVNYTASLDV-------------------HVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKL-------------------------------------KISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVP 1210 HSP 3 Score: 123.635 bits (309), Expect = 3.766e-24 Identity = 125/328 (38.11%), Postives = 160/328 (48.78%), Query Frame = 0
Query: 1636 GTIAPPFGKDTKATQAGFPGLPDWLDLDIIVPVVATVIVICVGILVVCVALTRRKHPPPLMHPEEYAQYYGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAGAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQT-----GPNTPA----------RHLSQTM---NPRRS-IANPGGPMQ----PALYDSVNCDYEPGTYQAPQNQNFGNPYDCPEGMYGGSMVSSVGYSK 1939
GTIAPP + T Q FP +P+WLDL+I+VP+ ATV+VI VG++V+CVAL+RR P + Y N M + D +E+GY PPNRKLPPVPG SNYNT DRIK GH + ++AT+D R+ Y+E+ G+ ++P P V H A +++I PYATFHLLG REE PN A FQT P G +T GP P R SQ+M N R S +AN G P D NC E Y + Q +G PYD G G SVG ++
Sbjct: 1591 GTIAPPEQEHTSVNQY-FPWVPEWLDLNIVVPIGATVVVIIVGVVVICVALSRRSRGPEQTRLRDDVAYNQSAGGNSTMDKRRPD--LRDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGH-SGSFRSHATWDPRHPRH--MYEELSLHPPGIR--------RIPAHPGSDETVYHR---------AGMEDEICPYATFHLLGFREEMD--PNKAMQFQTFPHQNGHERTHSGTIGPMGPGGVAGNGHIHQRSGSQSMPRANGRYSRVANQNGAANFAPGPEYDDPANCAPEEDQYGSQYGQ-YGAPYDH-YGSRGSVSRRSVGSAR 1889
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1008451770|ref|XP_015838915.1| (PREDICTED: Down syndrome cell adhesion molecule isoform X43 [Tribolium castaneum]) HSP 1 Score: 1541.55 bits (3990), Expect = 0.000e+0 Identity = 781/1512 (51.65%), Postives = 1013/1512 (67.00%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAI------------------------------VPFSFGKDVINEGDFAQVMCSISRGDEPLLR--------------------------------PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEEAPS----GPP-------------VDIRVAAVD----------------QHTLRM-------------------GQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKEL--DRSRDIAPKTNKV----NALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVN 1604
VV Q Y+ E +EYVI GN+A+ KC +PSFVAD V + W+ S+G+ ++ + +NYD KY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP+ S PKF + L F+ + + CPAQ +P+P++RWYKF+E K+ V L+DRVKQV GTLII+EAKV+DSGKYLC+VNNSVGGESVETVLTVTAPL ++EP+ Q +D+GR ATF C+++GNP+K++ WLK+G P+ H E LRI SV+KED+GMYQCF+RNDQESA+AT ELKLGGRF+PP+ AF+ T QPG V LKC+A G+P PE+ W +YG + Q+G + + NGDVVS+LNI+ T GG Y C ASSKVG HSA++NV G P+VR M +VAG ++ V CP AG+P+ SV WE+DGRQLP N +Q V+ NGTL I NV+R D +TY CVA+N +GYSAR L V VM PP I + ++ I+E D VM + R + + PRW +EPTDK FAQGSDA ++CKADGFP+P +TWK+A +P DY+DF N+ +IK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV +I+VQAPP F+IK R QT+ + VLQCEAKGEKPIGILWN+NNKRL+ D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW AP++GNS +TRY+IE+K K +W + + VLVPGDQT AGVF+LRPAT+YH R+VA+N+IG S GP ++ +ET ++ PP V R+A D +H L++ G GP+SD++ +TAEG P QPP + TTL++Q I+V+W SPPL +ANGVIKGYKV+YGPS TW+D +T++TK++ +E L LKKYTNY+++VLA+T+GGDGV++ + TEQD+P P +VKAL MS ++IL SW+ P EPNG + YTVY K + D ++ P + K+ +SHQ NL+ +YEFWVTA TTIGEG PS KVT+SP+ +PAKIASFDD F K+DV LPC+AVG P P + WK++G +D+IRQ PDGSL I V + + G+Y C V N YGQD VTH+L+VN PP P++ +TS TT+++T KLK + D P+HGY +HYKPEFGDW T QI +++TL+ LLCG RY +Y A+NSIG G S L T+G +P VP A +F+EVS+ S+TLHL+AW DGGCP+LYFV+E+K + +W VSN+VK G NFV+LDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP REI P E++ L N+N
Sbjct: 120 VVNQYYEAEVVSEYVIRGNTAVLKCNIPSFVADFVRVEAWVGSDGSLYNHT--ANYDSKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIGSVLPKFPATDNLRGFESKSNSTVTLLCPAQAFPVPLYRWYKFVEGTTRKQAVTLNDRVKQVAGTLIIREAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLKAKIEPQVQTIDFGRPATFTCNFEGNPIKTISWLKDGHPIDHNEAVLRIESVRKEDKGMYQCFIRNDQESAEATAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCIASGNPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTNDGGLYRCVASSKVGSADHSARINVYGLPFVRSMEKQAIVAGGTLIVHCPFAGHPVDSVVWERDGRQLPINRKQKVFINGTLIIENVERASDQATYDCVAKNSQGYSARGSLEVQVMVPPQINPFEFGQDSVNSGDLLMTICFVTKGDLPIKISWTLNSKPISEIDGITVMNTNKRASQLTIESVEAHHRGEYKCIAENKAGVSEFSTFLNVNVPPRWILEPTDKAFAQGSDAAVECKADGFPRPVVTWKRAT------GVSPGDYKDFKP-NNPDIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWVAPFDGNSPITRYMIEYKQSKVSWEGNTERVLVPGDQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIRVETNDQHSLVVYWKPPAREEWNGDILGYYVGYRLANSDKPYLFETVEFGREEGKEHHLKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKGYKVIYGPSDTWFDENTKDTKITAASETILHGLKKYTNYSMEVLAYTSGGDGVRTTPIHCQTEQDVPEAPIAVKALVMSTDSILASWKPPVEPNGIVEYYTVYYKPVSTDDKTEVKPTSQKIVPNLRNQNLSHQAKNLDSNLKYEFWVTAATTIGEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVITWKIKGVQFTTSDKIRQQPDGSLFIRDVSRNNAGEYSCHVENDYGQDSVTHQLIVNAPPHAPQIALTSTTTNSLTFKLK-PHESDVEPIHGYTIHYKPEFGDWETVQIGPTVEKYTLEKLLCGTRYQVYAKAYNSIGTGDPSDTLNPRTRGEKPIVPSAEKFIEVSSNSITLHLSAWSDGGCPMLYFVIEHKKKTSTEWIQVSNNVKLGQNFVLLDLDPACWYHLRVTAHNNAGFNVAEYEFATLTVTGGTIAPAREI------------PKEDTFQIILANLN 1609 HSP 2 Score: 676.011 bits (1743), Expect = 0.000e+0 Identity = 484/1315 (36.81%), Postives = 663/1315 (50.42%), Query Frame = 0
Query: 18 AQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPN----FVVIQPFET---DVG-----KEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIHVVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWID-SEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQ-------QVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMK----------VVAGKSMFVTCPV--AGYPISSVTWEKDGRQLPFNDRQTVY----RNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEG 1273
A+ DT+GPVF++EPPN++DFSNTTG + C + G P P I WV+ DG+ V DVPGLR+V+ANGNLV PPFRAEDY QEVHAQ Y C+A+N++G V SRDV VRAVV+Q Y+ V E+VI GN + KC IPS+V D V+V WV S G+ N ++V+ E DVG K Y L + S +L + GS + P ++ + ++ ++++ ++ C +F V L W EGT+ ++ N K V +G L IR +D K Y C + + GE+ + L +T PL K K V+ F G TC +G PI W K ++ + V L I+ + +D G Y C + N ES E T L EP Q + V G S KC GNP + W G + ++E + L I ++ D G+Y+C + SA + + + G FV + + G + + C G P V W G + + +V NG ++ N+ +A + TY+C A + G +SA+ G+ V+ M+P + V +G + C V PI ++W + + + D TV R L I +V+ Y C+A N G S S + V P PRW +EPTDK FAQGSDA ++CKADGFP+P +TWK+A +P DY+DF N+ +IK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV +I+VQAPP F+IK R QT+ + VLQCEAKGEKPIGILWN+NNKRL+ D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW AP++GNS +TRY+IE+K K +W + + VLVPGDQT AGVF+LRPAT+YH R+VA+N+IG S PS+TVTI TAEE P GPP IRV DQH+L V W P NG I GY V Y + + ++ + ++ ++++LK YT Y+V V AF G G S+ + + T + +P PP ++ + I VSW P NG I Y V D D K K+ A + + L K Y V A+T+ G+G
Sbjct: 16 AEDDTSGPVFVREPPNRIDFSNTTGAVVECSAHGNPTPDIIWVRSDGTAVGDVPGLRQVLANGNLVFPPFRAEDYRQEVHAQVYVCLAKNSVGSVHSRDVNVRAVVNQYYEAEVVSEYVIRGNTAVLKCNIPSFVADFVRVEAWVGSDGSLYNHTANYDSKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIGSVLPKF-PATDNL--RGFESKSNSTVTLL-------CPAQAF---PVPLYRWYKFVEGTTRKQAVTLNDRVKQV---AGTLIIREAKVEDSGK-YLCVVNNSVGGESVETV----LTVTAPL---KAKIEPQVQTIDF----GRPATFTCNFEGNPIKTISWLKDGHPIDHNEAV------------LRIESVRKEDKGMYQCFIRND--QESAEA--TAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCIASGNPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTNDGGLYRCVASSKVGSADHSARINVYGL----PFVRSMEKQAIVAGGTLIVHCPFAGHPVDSVVWERDGRQLPINRKQKVFI----NGTLI-IENVERASDQ--ATYDCVAKNSQG---YSAR----GSLEVQVMVPPQINPFEFGQDSVNSGDLLMTICFVTKGDLPI-KISWTLNSKPISEIDGITVMNTNKRASQLTIESVEAHHRGE-YKCIAENKAGVSEFSTF-LNVNVP----------------------------------PRWILEPTDKAFAQGSDAAVECKADGFPRPVVTWKRAT------GVSPGDYKDFKP-NNPDIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWVAPFDGNSPITRYMIEYKQSKVSWEGNTERVLVPGDQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIRVETNDQHSL-------------------------------------VVYWKPPAREEWNGDILGYYVGYRLANSDKPYLFETVEFGREEGKEHHLKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKGYKVIYGPSDTWFDENTKDTKITAASET-ILHGLKKYTNYSMEVLAYTSGGDG 1186 HSP 3 Score: 79.337 bits (194), Expect = 1.205e-10 Identity = 77/218 (35.32%), Postives = 101/218 (46.33%), Query Frame = 0
Query: 1725 EEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGA-GAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQ--TGPNTP----ARHLSQTMNPRR-------------SIANPGGPMQPALYDSVNCDYEPGTYQAPQNQNFGNPYD 1921
+E+GY PPNRKLPPVPG SNYNT DRIK G + +++T+D R Y+E+ +S +G + + + D++I PYATFHLLG REE P+ A FQT P G +G NTP +R SQ+M PR+ SI +PG P D NC E Y + Q +G PYD
Sbjct: 1663 DELGYIAPPNRKLPPVPG--SNYNTCDRIKRGTVLRAHYRSHSTWDPRRH----LYEEL-----------RSRRG----------------SNETVHTHRGMDDEICPYATFHLLGFREEMD--PSKAMQFQTFPHPHSGTMGPSGMNTPHQIHSRSGSQSM-PRQNRRYDRVGSQGNGSIYSPG----PEYDDPANCAPEDEQYGS-QYGGYGAPYD 1839
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1008451704|ref|XP_015838882.1| (PREDICTED: Down syndrome cell adhesion molecule isoform X10 [Tribolium castaneum]) HSP 1 Score: 1541.17 bits (3989), Expect = 0.000e+0 Identity = 780/1488 (52.42%), Postives = 1005/1488 (67.54%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAI------------------------------VPFSFGKDVINEGDFAQVMCSISRGDEPLLR--------------------------------PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEEAPS----GPP-------------VDIRVAAVD----------------QHTLRM-------------------GQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKEL--DRSRDIAPKTNKV----NALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDG 1580
VV Q YQ E +NEYVI GN+A+ KC +PSFVAD V +V W D+EG S+ Q +NYD KY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP+ P F + ++ +T + + C AQ YP+P+FRWYKF+E K+ V L+DRVKQV GTLII+EAKV+DSGKYLC+VNNSVGGESVETVLTVTAPL ++EP+ Q +D+GR ATF C+++GNP+K++ WLK+G P+ H E LRI SV+KED+GMYQCF+RNDQESA+AT ELKLGGRF+PP+ AF+ T QPG V LKC+A G+P PE+ W +YG + Q+G + + NGDVVS+LNI+ T GG Y C ASSKVG HSA++NV G P+VR M +VAG ++ V CP AG+P+ SV WE+DGRQLP N +Q V+ NGTL I NV+R D +TY CVA+N +GYSAR L V VM PP I + ++ I+E D VM + R + + PRW +EPTDK FAQGSDA ++CKADGFP+P +TWK+A +P DY+DF N+ +IK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV +I+VQAPP F+IK R QT+ + VLQCEAKGEKPIGILWN+NNKRL+ D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW AP++GNS +TRY+IE+K K +W + + VLVPGDQT AGVF+LRPAT+YH R+VA+N+IG S GP ++ +ET ++ PP V R+A D +H L++ G GP+SD++ +TAEG P QPP + TTL++Q I+V+W SPPL +ANGVIKGYKV+YGPS TW+D +T++TK++ +E L LKKYTNY+++VLA+T+GGDGV++ + TEQD+P P +VKAL MS ++IL SW+ P EPNG + YTVY K + D ++ P + K+ +SHQ NL+ +YEFWVTA TTIGEG PS KVT+SP+ +PAKIASFDD F K+DV LPC+AVG P P + WK++G +D+IRQ PDGSL I V + + G+Y C V N YGQD VTH+L+VN PP P++ +TS TT+++T KLK + D P+HGY +HYKPEFGDW T QI +++TL+ LLCG RY +Y A+NSIG G S L T+G +P VP A +F+EVS+ S+TLHL+AW DGGCP+LYFV+E+K + +W VSN+VK G NFV+LDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP+RE G
Sbjct: 120 VVQQFYQTEVNNEYVIRGNAAVLKCSIPSFVADFVTVVSWHDTEGHSYGLEQ-TNYDSKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIGFKAPTFQNDATSISYTRTINQSFGLLCQAQAYPVPIFRWYKFVEGTTRKQAVTLNDRVKQVAGTLIIREAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLKAKIEPQVQTIDFGRPATFTCNFEGNPIKTISWLKDGHPIDHNEAVLRIESVRKEDKGMYQCFIRNDQESAEATAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCIASGNPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTNDGGLYRCVASSKVGSADHSARINVYGLPFVRSMEKQAIVAGGTLIVHCPFAGHPVDSVVWERDGRQLPINRKQKVFINGTLIIENVERASDQATYDCVAKNSQGYSARGSLEVQVMVPPQINPFEFGQDSVNSGDLLMTICFVTKGDLPIKISWTLNSKPISEIDGITVMNTNKRASQLTIESVEAHHRGEYKCIAENKAGVSEFSTFLNVNVPPRWILEPTDKAFAQGSDAAVECKADGFPRPVVTWKRAT------GVSPGDYKDFKP-NNPDIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWVAPFDGNSPITRYMIEYKQSKVSWEGNTERVLVPGDQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIRVETNDQHSLVVYWKPPAREEWNGDILGYYVGYRLANSDKPYLFETVEFGREEGKEHHLKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKGYKVIYGPSDTWFDENTKDTKITAASETILHGLKKYTNYSMEVLAYTSGGDGVRTTPIHCQTEQDVPEAPIAVKALVMSTDSILASWKPPVEPNGIVEYYTVYYKPVSTDDKTEVKPTSQKIVPNLRNQNLSHQAKNLDSNLKYEFWVTAATTIGEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVITWKIKGVQFTTSDKIRQQPDGSLFIRDVSRNNAGEYSCHVENDYGQDSVTHQLIVNAPPHAPQIALTSTTTNSLTFKLK-PHESDVEPIHGYTIHYKPEFGDWETVQIGPTVEKYTLEKLLCGTRYQVYAKAYNSIGTGDPSDTLNPRTRGEKPIVPSAEKFIEVSSNSITLHLSAWSDGGCPMLYFVIEHKKKTSTEWIQVSNNVKLGQNFVLLDLDPACWYHLRVTAHNNAGFNVAEYEFATLTVTGGTIAPIRESPG 1598 HSP 2 Score: 681.404 bits (1757), Expect = 0.000e+0 Identity = 481/1316 (36.55%), Postives = 665/1316 (50.53%), Query Frame = 0
Query: 18 AQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVILGNDALMKCSI-PSFVADQLEVVSWHGSDGSEIR----PGQIHVVYQP-------YQQEASN-EYVIVGNSAL-FKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQ-------QVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMK----------VVAGKSMFVTCPV--AGYPISSVTWEKDGRQLPFNDRQTVY----RNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEG 1273
A+ DT+GPVF++EPPN++DFSNTTG + C + G P P I WV+ DG+ V DVPGLR+V+ANGNLV PPFRAEDY QEVHAQ Y C+A+N++G V SRDV VRAVV Q Y V E+VI GN + KC IPS+V D V V+ W ++ G+S +T+ +Y++L + L + P + + H G E R G++ V+ +P +Q +A++ Y N + C+ ++ + ++ EGT+ ++ N K V +G L IR +D K Y C + + GE+ + L +T PL K K V+ F G TC +G PI W K ++ + V L I+ + +D G Y C + N ES E T L EP Q + V G S KC GNP + W G + ++E + L I ++ D G+Y+C + SA + + + G FV + + G + + C G P V W G + + +V NG ++ N+ +A + TY+C A + G +SA+ G+ V+ M+P + V +G + C V PI ++W + + + D TV R L I +V+ Y C+A N G S S + V P PRW +EPTDK FAQGSDA ++CKADGFP+P +TWK+A +P DY+DF N+ +IK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV +I+VQAPP F+IK R QT+ + VLQCEAKGEKPIGILWN+NNKRL+ D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW AP++GNS +TRY+IE+K K +W + + VLVPGDQT AGVF+LRPAT+YH R+VA+N+IG S PS+TVTI TAEE P GPP IRV DQH+L V W P NG I GY V Y + + ++ + ++ ++++LK YT Y+V V AF G G S+ + + T + +P PP ++ + I VSW P NG I Y V D D K K+ A + + L K Y V A+T+ G+G
Sbjct: 16 AEDDTSGPVFVREPPNRIDFSNTTGAVVECSAHGNPTPDIIWVRSDGTAVGDVPGLRQVLANGNLVFPPFRAEDYRQEVHAQVYVCLAKNSVGSVHSRDVNVRAVVQQFYQTEVNNEYVIRGNAAVLKCSIPSFVADFVTVVSWHDTEGHSYGLE---------QTNYDSKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTG-ETRLSATKGRL-VITEPIGFKAPTFQNDATSISYTRTINQSFGLLCQAQAYPVPIFRWYKFV--EGTTRKQAVTLNDRVKQV---AGTLIIREAKVEDSGK-YLCVVNNSVGGESVETV----LTVTAPL---KAKIEPQVQTIDF----GRPATFTCNFEGNPIKTISWLKDGHPIDHNEAV------------LRIESVRKEDKGMYQCFIRND--QESAEA--TAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCIASGNPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTNDGGLYRCVASSKVGSADHSARINVYGL----PFVRSMEKQAIVAGGTLIVHCPFAGHPVDSVVWERDGRQLPINRKQKVFI----NGTLI-IENVERASDQ--ATYDCVAKNSQG---YSAR----GSLEVQVMVPPQINPFEFGQDSVNSGDLLMTICFVTKGDLPI-KISWTLNSKPISEIDGITVMNTNKRASQLTIESVEAHHRGE-YKCIAENKAGVSEFSTF-LNVNVP----------------------------------PRWILEPTDKAFAQGSDAAVECKADGFPRPVVTWKRAT------GVSPGDYKDFKP-NNPDIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWVAPFDGNSPITRYMIEYKQSKVSWEGNTERVLVPGDQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIRVETNDQHSL-------------------------------------VVYWKPPAREEWNGDILGYYVGYRLANSDKPYLFETVEFGREEGKEHHLKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKGYKVIYGPSDTWFDENTKDTKITAASET-ILHGLKKYTNYSMEVLAYTSGGDG 1187 HSP 3 Score: 93.2041 bits (230), Expect = 7.263e-15 Identity = 112/308 (36.36%), Postives = 152/308 (49.35%), Query Frame = 0
Query: 1636 GTIAPPFGKDTKATQAGFPGLPDWLDLDIIVPVVATVIVICVGILVVCVALTRRKHPPPLMH-PEEYAQYYGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGA-GAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQ--TGPNTP----ARHLSQTMNPRR-------------SIANPGGPMQPALYDSVNCDYEPGTYQAPQNQNFGNPYD 1921
GTIAP +++ + FP +PDW+DL+I VPV ATV+V+ VGI+V+CVAL+RR + P +Y Y Q + + L +E+GY PPNRKLPPVPG SNYNT DRIK G + +++T+D R Y+E+ +S +G + + + D++I PYATFHLLG REE P+ A FQT P G +G NTP +R SQ+M PR+ SI +PG P D NC E Y + Q +G PYD
Sbjct: 1588 GTIAPI--RESPGVKMLFPWIPDWVDLNIAVPVAATVVVVVVGIVVICVALSRRANGPLQTRLRSDYDVVYNQSVNASSTLDKRRPDL-RDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGTVLRAHYRSHSTWDPRRH----LYEEL-----------RSRRG----------------SNETVHTHRGMDDEICPYATFHLLGFREEMD--PSKAMQFQTFPHPHSGTMGPSGMNTPHQIHSRSGSQSM-PRQNRRYDRVGSQGNGSIYSPG----PEYDDPANCAPEDEQYGS-QYGGYGAPYD 1851
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1339078580|ref|XP_023726715.1| (Down syndrome cell adhesion molecule-like protein Dscam2 isoform X19 [Cryptotermes secundus]) HSP 1 Score: 1510.74 bits (3910), Expect = 0.000e+0 Identity = 787/1486 (52.96%), Postives = 1009/1486 (67.90%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHS-NYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIA---------VTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRN------------------------------GTLAISNV--------------QRKEDASTYTCVARNDE---------GYSARSDLTVTVM---EPPAIV--PFSFGKDVINEGDFAQVMCSISRGDEPL---LRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEE----APSGPP-------------VDIRVAAVD----------------QHTLRMGQ-------------------GPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELD-RSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAP 1574
VV Q Y EA NEYVI GNSA+ KC++PSFVAD V + W+ +G + S S NYDGKY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP ++ PK S +K +GG I ++C G+P+P+FRWYKF++ K+ V LDDRVKQV GTLIIKEA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL+ +EP Q VD+GR A F C+++GNP+K + WLK+G+ + H ++ LRI SVKKED+GMYQCF+RNDQE+AQA+ ELKLGGRF+PP+ AF T QPGP V LKC+A G+P PE+ W + G + + LQVG + + NGDVVS+LNIS T GG Y+C ASSKVG V H+AKLNV G P++R M +VAG+++ VTCPVAGYPI ++ WE+DGR LP N +Q V+ N GTL + + + + ++T TC D+ R D+ VTV+ + +I+ P + + A+ +++ L + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S GP V +E ++ PP V ++A+ D +H L++G+ GPMS+E +TAEG P QPP + TTL+SQ I+V+W SPPL +ANG+IKGYKVVYGPS WYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGV+S + TEQD+P PS+VKAL MS ++ILVSW+ PE+PNG + QYTVY++E ++D PK KV QMS + L KK RYEFWVTA T IGEG PS V+LSP++R+PAKIASFDD F A K+DVKLPC+AVG P P + WK++G ++DRIRQLP+GSL I V ++D G+Y C V N +G D VTH+LVV+ PP P+V++TS TT++IT+KL+ +P D P+HGY +HYKPEFGDW T Q+ + ++TL++L CG RY +YVT +N IG G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP++YFVVE+K + H +W VSN+VK GGNFVVLDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP
Sbjct: 125 VVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPTSNIAPK-------SPGKKYEGGEIMYSPAGQRVFMSCQVVGFPVPLFRWYKFVDGTMRKQAVTLDDRVKQVSGTLIIKEARVEDSGKYLCVVNNSVGGESVETVLTVTAPLAANIEPTTQTVDFGRPAVFTCNFEGNPIKMISWLKDGKSLSHEDSVLRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGLPFIRPMEKKAIVAGETLIVTCPVAGYPIETIVWERDGRVLPINRKQKVFPNGTLIIENVERLSDQATYTCVARNAQGYSARGTLEVQVMVPPEIVPFTFGDKPRSEGQSATVTCAVDGDKPVGVQWMLNDKEIRGDMNVTVIPLGDAGSIIAIPHVTAQHMGQYTCIAKNSAGVTKHTAQLAVTVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKLKISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVPEAPSAVKALVMSGDSILVSWKPPEQPNGIVSQYTVYVREDSAEAKDEKPKLTKVPPFQMSFEASELKKKERYEFWVTASTIIGEGQPSKSVSLSPSSRVPAKIASFDDSFSATYKEDVKLPCLAVGIPAPDIQWKVKGVAFQQDDRIRQLPEGSLFIKSVTRQDAGEYSCSVENSFGHDTVTHQLVVHAPPHSPQVSLTSMTTNSITMKLR-PHPTDTAPLHGYTVHYKPEFGDWETVQVSNQAQKYTLENLWCGSRYQVYVTGYNGIGTGDPSDILNTRTKGSKPVIPEAGRFIEVSTNSITLHLSAWSDGGCPMIYFVVEHKKKLHTEWNQVSNNVKPGGNFVVLDLDPANWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAP 1595 HSP 2 Score: 702.975 bits (1813), Expect = 0.000e+0 Identity = 492/1332 (36.94%), Postives = 670/1332 (50.30%), Query Frame = 0
Query: 19 QSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSL---KTAPN----FVVIQPFE---TDVG-----KEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIH----VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA---PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVV----------AGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNG----TLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+ DT GPV+I+EPPN++DFSNTTG + C +RG P+P+I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A N++G + SRDV VRAVV Q Y E E+VI GN + KCKIPS+V D V V WV G +L T+ N ++V+ E DVG K Y L + S +L V++ S+ + PG+ + ++Y P G C+V F + ++D GT R Q D + V SG L I+ +D K Y C + + GE+ + L +T PLA+ + V G TC +G PI + W K + K ++ +D V L I+ K +D G Y C + N L + P + K++ + G S KC GNP + W +G+ + +++ + L I+S+ D G+Y+C + S + +L + G F+ + G + + C G P + W E DG VL + NG ++ N+ R TY C A + G +SA+ G V+ M+P ++V G+S VTC V G V W + +++ + TV G +AI +V + YTC+A+N G + + AQ+ ++ PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S PSDTV I TAEEAP GPP ++V A DQH L K++W P NG I GY V Y + + ++ + + ++ ++ LK YT Y+V V AF G G SE T + IP PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S + +P
Sbjct: 22 EDDTAGPVYIREPPNRVDFSNTTGAVVECSARGNPVPEIIWVRSDGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYVCLARNSVGTIHSRDVNVRAVVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRL-VITEPTSNIAPKSPGKKYEGGEIMYSP-----------AGQRVFMSCQVVGFPVPLFRWYKFVD--GTM--RKQAVTLDDR-VKQVSGTLIIKEARVEDSGK-YLCVVNNSVGGESVETV----LTVTAPLAANIEPTTQTVDF-------GRPAVFTCNFEGNPIKMISWLK------DGKSLSHEDSV------LRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGL----PFIRPMEKKAIVAGETLIVTCPVAGYPIETIVW-------ERDGRVLPINRKQKVFPNGTLI-IENVE--RLSDQATYTCVARNAQG---YSAR----GTLEVQVMVPPEIVPFTFGDKPRSEGQSATVTCAVDGDKPVGVQWMLNDKEIRGDMNVTVIPLGDAGSIIAIPHVT-AQHMGQYTCIAKNSAGVTKHT---------------------------AQLAVTVP--------PRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKL-------------------------------------KISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVP 1210 HSP 3 Score: 124.02 bits (310), Expect = 3.182e-24 Identity = 125/328 (38.11%), Postives = 160/328 (48.78%), Query Frame = 0
Query: 1636 GTIAPPFGKDTKATQAGFPGLPDWLDLDIIVPVVATVIVICVGILVVCVALTRRKHPPPLMHPEEYAQYYGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAGAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQT-----GPNTPA----------RHLSQTM---NPRRS-IANPGGPMQ----PALYDSVNCDYEPGTYQAPQNQNFGNPYDCPEGMYGGSMVSSVGYSK 1939
GTIAPP + T Q FP +P+WLDL+I+VP+ ATV+VI VG++V+CVAL+RR P + Y N M + D +E+GY PPNRKLPPVPG SNYNT DRIK GH + ++AT+D R+ Y+E+ G+ ++P P V H A +++I PYATFHLLG REE PN A FQT P G +T GP P R SQ+M N R S +AN G P D NC E Y + Q +G PYD G G SVG ++
Sbjct: 1591 GTIAPPEQEHTSVNQY-FPWVPEWLDLNIVVPIGATVVVIIVGVVVICVALSRRSRGPEQTRLRDDVAYNQSAGGNSTMDKRRPD--LRDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGH-SGSFRSHATWDPRHPRH--MYEELSLHPPGIR--------RIPAHPGSDETVYHR---------AGMEDEICPYATFHLLGFREEMD--PNKAMQFQTFPHQNGHERTHSGTIGPMGPGGVAGNGHIHQRSGSQSMPRANGRYSRVANQNGAANFAPGPEYDDPANCAPEEDQYGSQYGQ-YGAPYDH-YGSRGSVSRRSVGSAR 1889
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1032018726|ref|XP_016767044.1| (PREDICTED: Down syndrome cell adhesion molecule isoform X48 [Apis mellifera]) HSP 1 Score: 1273.07 bits (3293), Expect = 0.000e+0 Identity = 676/1336 (50.60%), Postives = 850/1336 (63.62%), Query Frame = 0
Query: 18 AQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTA---PNFVVIQPFETDVGKEYVILGNDALMKCSIPSFVADQLEVVSWHGSDG-SEIRPGQIHVVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLL--------------RPRWTVEPTDKQFA-------QGSDA-------------------------------------------KIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGD-QTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPS 1276
A+ ++ GPVF++EPPN++DFSN TG + CQ+RG P P I WV+ DGS V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A + G V SRDV VRAVV Q Y+ V E V+ GN KC +PS+V D V V++W+ S +A VV Q FE V ++ I GN A+ KC +PSFVAD ++VV W S+G S + GQ +VV Q Y +E+V+ GN+A+ KC +PSFVA+ V++ WI+ E T S ++YDGKY+VLPSGEL IR+V P+DG+KTY+CRTKHRLTGET+LSAT G+LVITEP+ KP+ +S K G + + CPAQG+P+P FRWYKF+E ++ ++ V L++RV+QV GTLII+EA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL E+EP Q +D+GR ATF C+ GNP+K+V WLK+G+P+G E LRI SVKKED+GMYQCFVRNDQESAQAT ELKLGGRF+PP+ AF T QPGP + LKCVA G+P PE+ W + G + LQVG + + NGDVVS+LNIS T GG Y+C A+SKVG HSA+LNV G P++R M +VAG+++ VTCPVAGYPI S+ WE+D R LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V VM P I PFS G + N G+ +C+I +GD P+ RP T+ T K+ + GS A +++CKADGFPKP++TWKKA + TP DY D SN +I + DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK + QTA E VLQCEA+GEKPIGILWNMNNKRLD D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW APY+GNS + RYVIE+K KG+W D+D VLVPG Q +AGVF+LRPAT+YH R+VA+N+IG S PSDTVTI TAEEAPSGPP IRV +DQHTL KVTW PP NG I GY V Y S + ++ + + ++ ++ +LK YT Y+V V AF G G SE T + +P PP ++ + I +SW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S
Sbjct: 33 AEDESMGPVFVKEPPNRVDFSNGTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYSCLARSPAGSVHSRDVNVRAVVQQFYETRVIDEFVLRGNTATLKCLVPSFVADFVDVIEWLAVEDGSTYSANSQEEKVVAQYFEVQVYDQFAIRGNAAIFKCQVPSFVADHVDVVGWIDSNGGSYVADGQSYVVGQRYAVNVMDEHVLRGNAAIIKCHIPSFVAEFVEVDSWIEDETTEIYPS--TDYDGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTGETRLSATKGRLVITEPVNGAKPRVASTSKYDVLTSHADGPVTMLCPAQGHPLPAFRWYKFIEGSSRRQPVQLNERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAPLGAEIEPSTQTIDFGRPATFTCNVRGNPIKTVSWLKDGKPLGLEEAVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCIAASKVGSAEHSARLNVYGLPFIRHMDKKAIVAGETLRVTCPVAGYPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVAPQIAPFSIGDEPANWGEAVSAVCTIVKGDLPIELAWALNGEPISANDRPDITISSTGKRVSLMTIEAVSGSHAGEYTCTASNAAGATSYSATLAVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKKAAGD------TPGDYTDLKLSNP-DISVEDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQAPPHFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWETDIDRVLVPGSQQNVAGVFNLRPATTYHLRIVAENEIGASDPSDTVTIITAEEAPSGPPTSIRVDDLDQHTL-------------------------------------KVTWKPPPREDWNGEILGYYVGYRLSSSEKPYMFETVDFSKEDGKEHHLQIMNLKTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQPPHDTTCTTLTSQTIRISWMSPPLSAANGVITGYKVIYGPSDTWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVKS 1321 HSP 2 Score: 729.939 bits (1883), Expect = 0.000e+0 Identity = 500/1415 (35.34%), Postives = 717/1415 (50.67%), Query Frame = 0
Query: 238 EASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKH-----RLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGT---LIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGE--PVGHTET-----TLRINSVKK-EDRGMYQCFVRNDQ-ESAQATGELKLGGRFDPPEFVSAFDAVTTQP---GPMVSLKC-VAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEK-------DGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAK---GEKPIG---ILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYG----LKVVDKTGRTVKLSWQAP--YNGNSNLTRYVIEFK---PIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVNLVVP 1608
E S + + G A F C V + + V W+ DGK + L L+I +V +D Y+C ++ + T E KL G+ EP P+ Q G ++ + C A G P P W + +N + + + V G L I +D G Y C+ + VG L V + K+ +V G + C G P++S+ W ++ P+ + TL I +V++ D+ Y C RN Q SA+ T E+++ P+ ++ F ++ +P G VS C + KGD E+ W + G ++ + S G VS + I + G Y C AS+ G S+SA L VN P ++ + G V C G+P VTW+K D L ++ +GTL+I+N+Q K + Y C A N G + + ++V PP + ++ ++ +G A + C+A G I W +NN ++ P + N + D L IK ++ + + C A+N G + VQ P E+ + S +V A G PI I + ++ +T++D R + Q + + T VA N G+ D S + I E P G ++V D T+K++W+ P + N + Y + ++ K VD G + + +L+ T Y V A N ++G GPMS+E HTAEG P QPP + TTL+SQ I+++W SPPL++ANGVI GYKV+YGPS TWYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGVKS + TEQD P P ++KAL MS E+ILVSW+ P +PNG I QYTVY K D + + P + KV Q++H+ L+K RY+FWVTA T IGEG S V L+P+ R+PAKIASFDD F A K+DVKLPC+AVG P P++ WK+RG + +DR+RQLP+GSL I V + D G+Y C V N +G D VTH+L+V+ PP P++T+T+ TT+++T+K++ +P D P+HGY +HYKPEFGDW+TAQI ++TL++LLCG RY +YVTA+N IG G S L TKG +P +PEA RF+EV+ S+TLHLNAW DGGCP++YFVVE+K ++ Q+W VSN+VK GGNFVVLDL PATWY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP RE+ D E+ + F+ N+NLVVP
Sbjct: 462 EPSTQTIDFGRPATFTCNVR---GNPIKTVSWLK--------------DGKPLGLEEAVLRIESVKKEDK-GMYQCFVRNDQESAQATAELKL---GGRF---EP-----PQIRQAFAEETLQP--GPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCIAASKVGSAEHSARLNVYGLPFIRHMDKKAIV-AGETLRVTCPVAGYPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQV---MVAPQ-IAPF-SIGDEPANWGEAVSAVCTIVKGDLPIELAWALNGEPISANDRPDITI--SSTGKRVSLMTIEAVSGSHAGEYTCTASNAAGATSYSATLAVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQ-KTNEGYYLCEAVNGIGAGLSAVIFISVQAPP----------------------------------HFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWN---MNNKRLDPKSDSRYTIREEILANGVLSD--LSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVP--EVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWETDID-RVLVPGSQQNVAGVFNLRPATTYH-----LRIVAENEIGASDPSDTVTIITAEEAPSGPPTSIRVDDLDQHTLKVTWKPPPREDWNGEILGYYVGYRLSSSEKPYMFETVDFSKEDGKEHHLQIMNLKTYTQYSVVVQAFN-------------------------------------KVGSGPMSEERRQHTAEGVPEQPPHDTTCTTLTSQTIRISWMSPPLSAANGVITGYKVIYGPSDTWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSSESILVSWRPPSQPNGVITQYTVYTKA-DNAEE--PTSQKVPPNQLTHEASELDKTRRYDFWVTASTNIGEGEASKIVALAPSVRVPAKIASFDDKFTATYKEDVKLPCLAVGVPAPEVTWKVRGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLIVHAPPHSPQITLTATTTNSLTMKVR-PHPTDNAPIHGYTIHYKPEFGDWDTAQISSTVQKYTLENLLCGSRYQIYVTAYNGIGTGDPSDMLNTRTKGSKPIIPEAARFIEVATNSITLHLNAWSDGGCPMIYFVVEHKKKNQQEWNQVSNNVKPGGNFVVLDLVPATWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAPARELPDVNGGGND-----EDPMKIFMANLNLVVP 1743 HSP 3 Score: 83.1889 bits (204), Expect = 7.890e-12 Identity = 81/242 (33.47%), Postives = 105/242 (43.39%), Query Frame = 0
Query: 1705 YGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAG---AYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLP-PGAG---------GAQTGPNTPARHLSQTMNPRRS-----IANPGGP------MQPALYDSVNCDYEPGTYQAPQNQNFGNPYD 1921
Y Q G + + L +E+GY PPNRKLPPVPG SNYNT DRIK G G G +++T+D R Y+E+ + G G S +++I PYATFHLLG REE P+ A FQT P PG G G T + +R SQ+M PR++ + + GG P D NC E Y + Q +G PYD
Sbjct: 1775 YQQTGVGGATLDKRRPDL-RDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGTVISGTGSIRSHSTWDPRRH----MYEELNHCAPNRRCPPPPRMGSAE-----------------GLSHRGMEDEICPYATFHLLGFREEMD--PSKAMQFQTFPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSM-PRQNGRYSRVPSQGGGSGTHNVFSPEYDDPANCAPEEDQYGSQYGQ-YGAPYD 1988 The following BLAST results are available for this feature:
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold61_size441589:470..38323- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold61_size441589-snap-gene-0.14 ID=maker-scaffold61_size441589-snap-gene-0.14|Name=down syndrome cell adhesion molecule isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=37854bp|location=Sequence derived from alignment at scaffold61_size441589:470..38323- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'down syndrome cell adhesion molecule isoform x1' has the following synonyms
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