gametocyte-specific factor 1, maker-scaffold712_size108441-snap-gene-0.28 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of gametocyte-specific factor 1 vs. L. salmonis genes
Match: EMLSAG00000012362 (supercontig:LSalAtl2s:LSalAtl2s903:219878:221818:-1 gene:EMLSAG00000012362 transcript:EMLSAT00000012362 description:"maker-LSalAtl2s903-snap-gene-1.71") HSP 1 Score: 92.4337 bits (228), Expect = 2.953e-21 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 0 Query: 30 TITCPYNASHQIRPGRIQYHLVRCAKQHPGLDMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESRPDHHHHRWENPVVYGSSLI 121 T+ CPYN +H + RIQYHL++C K+HP LD +C YNATHH+ R +E H+ C DR E + ++ E P H NP+ GS I Sbjct: 402 TVVCPYNRTHIVSADRIQYHLMKCKKKHPHLDYVVCIYNATHHIARSEEIEHMRECPDRIFEEMETYKFNEV-PSHLQGYIPNPINIGSDFI 492
BLAST of gametocyte-specific factor 1 vs. L. salmonis genes
Match: EMLSAG00000000945 (supercontig:LSalAtl2s:LSalAtl2s1166:168370:168879:1 gene:EMLSAG00000000945 transcript:EMLSAT00000000945 description:"snap_masked-LSalAtl2s1166-processed-gene-1.19") HSP 1 Score: 75.0998 bits (183), Expect = 8.817e-17 Identity = 36/105 (34.29%), Postives = 60/105 (57.14%), Query Frame = 0 Query: 30 TITCPYNASHQIRPGRIQYHLVRCAKQHPGLDMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESRPDHHHHRWENPVVYGSSLIPFEEPKPQSRPLY 134 T+ CPYN +HQI P R+QYHLVRC + + +D+ +CP+N+TH++ + ++H+ +C R+ E + ++ +E ++ SSL PKP S Y Sbjct: 6 TVECPYNPAHQIIPSRLQYHLVRCKRSYKDVDLKVCPFNSTHYLRKEAYSAHVSSCSSRENTEKMIYPRSQN--------YETCSLFQSSL-----PKPSSTQEY 97
BLAST of gametocyte-specific factor 1 vs. SwissProt
Match: gi|75077109|sp|Q4R8M9.1|GTSF1_MACFA (RecName: Full=Gametocyte-specific factor 1; AltName: Full=Protein FAM112B >gi|116241359|sp|Q8WW33.2|GTSF1_HUMAN RecName: Full=Gametocyte-specific factor 1; AltName: Full=Protein FAM112B) HSP 1 Score: 70.8626 bits (172), Expect = 1.131e-13 Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 0 Query: 31 ITCPYNASHQIRPGRIQYHLVRCAKQHPGL--DMFICPYNATHHVPRHQETSHLMNCDDRDIIE 92 + CPY+ +HQIR R YHL++C K HP + + CP+NA H VPR + + H+ +CDDR IE Sbjct: 15 LQCPYDKNHQIRACRFPYHLIKCRKNHPDVASKLATCPFNARHQVPRAEISHHISSCDDRSCIE 78
BLAST of gametocyte-specific factor 1 vs. SwissProt
Match: gi|93139200|sp|Q3SZU0.1|GTSF1_BOVIN (RecName: Full=Gametocyte-specific factor 1; AltName: Full=Protein FAM112B) HSP 1 Score: 69.3218 bits (168), Expect = 3.176e-13 Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 0 Query: 31 ITCPYNASHQIRPGRIQYHLVRCAKQHPGL--DMFICPYNATHHVPRHQETSHLMNCDDRDIIE 92 + CPY+ +HQIR R YHL++C K HP + + CP+NA H VPR + + H+ +CDD+ IE Sbjct: 15 LQCPYDKNHQIRACRFPYHLIKCRKNHPDVANKLATCPFNARHQVPRAEISHHISSCDDKSCIE 78
BLAST of gametocyte-specific factor 1 vs. SwissProt
Match: gi|27734592|sp|Q9DAN6.1|GTSF1_MOUSE (RecName: Full=Gametocyte-specific factor 1; AltName: Full=Protein FAM112B) HSP 1 Score: 69.3218 bits (168), Expect = 3.240e-13 Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 0 Query: 31 ITCPYNASHQIRPGRIQYHLVRCAKQHPGL--DMFICPYNATHHVPRHQETSHLMNCDDRDIIE 92 + CPY+ +HQIR R YHL++C K HP + + CP+NA H VPR + + H+ +CDD+ IE Sbjct: 15 LQCPYDKNHQIRACRFPYHLIKCRKNHPDVANKLATCPFNARHQVPRAEISHHISSCDDKSCIE 78
BLAST of gametocyte-specific factor 1 vs. SwissProt
Match: gi|118217|sp|P13007.1|D7_XENLA (RecName: Full=Protein D7) HSP 1 Score: 60.4622 bits (145), Expect = 2.184e-9 Identity = 38/127 (29.92%), Postives = 59/127 (46.46%), Query Frame = 0 Query: 31 ITCPYNASHQIRPGRIQYHLVRCAKQHPGLDMFI--CPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESRPDHHHHRWENP---VVYGSSLIPFEEPKPQSRPLYNPPRPVLGPEILCQMPAT 152 + CPY+ +H IRP R YHLV+C + + + CPYNA H VP+ + H+ +C+ R +E + + W++P V+ + P PKP + P +P E MP T Sbjct: 7 MQCPYDKNHMIRPSRFPYHLVKCRENNRAAAKILATCPYNARHRVPKQELDLHMASCEYRVTMEPISAAFSHQKVE--TSTWQSPPCEEVWETDEDPVSRPKPFILNDFTPSQPFNMSEGDGNMPYT 131
BLAST of gametocyte-specific factor 1 vs. SwissProt
Match: gi|74866039|sp|Q8SWX0.1|ASTRX_DROME (RecName: Full=Gametocyte-specific factor 1 homolog; AltName: Full=Protein asterix) HSP 1 Score: 53.9138 bits (128), Expect = 1.053e-7 Identity = 20/62 (32.26%), Postives = 40/62 (64.52%), Query Frame = 0 Query: 31 ITCPYNASHQIRPGRIQYHLVRCAKQHPG-LDMFICPYNATHHVPRHQETSHLMNCDDRDII 91 + CPYN H++ ++Q H+++C + +++ +CP+N++H +P Q H +C+DR+II Sbjct: 2 VYCPYNKEHKMLRKKLQQHILKCRVIYKDTVELMVCPFNSSHLIPEPQFFQHTQSCEDRNII 63
BLAST of gametocyte-specific factor 1 vs. nr
Match: gi|290561276|gb|ADD38040.1| (Gametocyte-specific factor 1 [Lepeophtheirus salmonis]) HSP 1 Score: 90.8929 bits (224), Expect = 1.289e-18 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 0 Query: 30 TITCPYNASHQIRPGRIQYHLVRCAKQHPGLDMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESRPDHHHHRWENPVVYGSSLI 121 T+ CPYN +H + RIQYHL++C K+HP LD +C YNATHH+ R +E H+ C DR E + ++ E P H NP+ GS I Sbjct: 4 TVVCPYNRTHIVSADRIQYHLMKCKKKHPHLDYVVCIYNATHHIARSEEIEHMRECPDRIFEEMETYKFNEV-PSHLQGYIPNPINMGSDFI 94
BLAST of gametocyte-specific factor 1 vs. nr
Match: gi|1339064198|ref|XP_023713406.1| (uncharacterized protein LOC111867628 isoform X1 [Cryptotermes secundus]) HSP 1 Score: 80.8777 bits (198), Expect = 3.654e-14 Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = 0 Query: 18 PFSSHRPSMDVPTITCPYNASHQIRPGRIQYHLVRCAKQHPGLDMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESRPDHHHHRWENPVVYGSSLIPFEEPKPQSR---PLYNP 136 PF S P D P + C Y+ SH + R+Q HLV+C++ HP + ICP+NA HHV + H+ NC DR +IE K+ L +S H E P Y IP +E ++ P+YNP Sbjct: 8 PFRSEMPIED-PIVQCQYDPSHSVLKSRLQMHLVKCSRNHPLANKAICPFNAVHHVDKPNYQYHINNCPDRRVIEGYKYELEDSE---HGDLAETP--YHQPSIPPDEDTWEAETPVPMYNP 123
BLAST of gametocyte-specific factor 1 vs. nr
Match: gi|1002587356|ref|XP_015672256.1| (PREDICTED: gametocyte-specific factor 1 [Protobothrops mucrosquamatus]) HSP 1 Score: 77.7962 bits (190), Expect = 8.176e-14 Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 0 Query: 31 ITCPYNASHQIRPGRIQYHLVRCAKQHPGL--DMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESR 102 I CPY+ SHQIR R YHLV+C K HPG+ + CP+NA H VPR Q + H+ +CDD+ IE E++ Sbjct: 16 IQCPYDKSHQIRACRFPYHLVKCRKNHPGIVQQLVTCPFNARHQVPREQISQHISSCDDKRCIEQDIASQAENK 89
BLAST of gametocyte-specific factor 1 vs. nr
Match: gi|1227956521|ref|XP_021917070.1| (gametocyte-specific factor 1 homolog [Zootermopsis nevadensis] >gi|1227956523|ref|XP_021917079.1| gametocyte-specific factor 1 homolog [Zootermopsis nevadensis] >gi|646723677|gb|KDR24207.1| Gametocyte-specific factor 1 [Zootermopsis nevadensis]) HSP 1 Score: 79.7221 bits (195), Expect = 8.200e-14 Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 0 Query: 29 PTITCPYNASHQIRPGRIQYHLVRCAKQHPGLDMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESRPDHHHHRWENPVVYGS-SLIPFEEPK 127 P I CPYN SH IR R+Q HL++C + +P + +CP+NA HHV + H+ C DR +IE K+ + ES V+G L P+ EP+ Sbjct: 6 PEIQCPYNKSHVIRTSRMQVHLIKCKRNYPLAEKMVCPFNAVHHVDKPDYQYHVSTCPDRRVIEGHKYEVQES-------------VHGDLQLAPYNEPE 92
BLAST of gametocyte-specific factor 1 vs. nr
Match: gi|927138761|ref|XP_013912434.1| (PREDICTED: gametocyte-specific factor 1 [Thamnophis sirtalis] >gi|927138765|ref|XP_013912436.1| PREDICTED: gametocyte-specific factor 1 [Thamnophis sirtalis]) HSP 1 Score: 76.2554 bits (186), Expect = 3.259e-13 Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 0 Query: 31 ITCPYNASHQIRPGRIQYHLVRCAKQHPGL--DMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESR 102 I CPY+ SHQIR R YHLV+C K HPG+ + CP+NA H VPR + + H+ +CDD+ IE E++ Sbjct: 16 IQCPYDKSHQIRACRFPYHLVKCRKNHPGIVEQLVTCPFNARHQVPRDEISQHISSCDDKRCIEQDIASQAENK 89
BLAST of gametocyte-specific factor 1 vs. nr
Match: gi|939627372|ref|XP_014276842.1| (PREDICTED: uncharacterized protein LOC106681148 isoform X1 [Halyomorpha halys]) HSP 1 Score: 79.7221 bits (195), Expect = 3.315e-13 Identity = 36/99 (36.36%), Postives = 57/99 (57.58%), Query Frame = 0 Query: 22 HRPSMDV--PTITCPYNASHQIRPGRIQYHLVRCAKQHPGLDMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESRPDHHHHRWENPVVYGS 118 + +MD PT+TCPYN +H I R+Q+HL +C QHP + +CP+N+TH +P+ + HL C DR +++A ++G S H P++ S Sbjct: 3 EKSNMDAAEPTLTCPYNKAHSIISSRMQFHLTKCRIQHPTNEKAVCPFNSTHVIPQCEYAYHLSFCPDRIVLDAFTCKVGSSNAPKVDHTTVEPIIVKS 101
BLAST of gametocyte-specific factor 1 vs. nr
Match: gi|1339064200|ref|XP_023713415.1| (gametocyte-specific factor 1 homolog isoform X2 [Cryptotermes secundus] >gi|1339064202|ref|XP_023713424.1| gametocyte-specific factor 1 homolog isoform X2 [Cryptotermes secundus] >gi|1339064204|ref|XP_023713431.1| gametocyte-specific factor 1 homolog isoform X2 [Cryptotermes secundus]) HSP 1 Score: 77.7962 bits (190), Expect = 4.336e-13 Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 0 Query: 26 MDVPTITCPYNASHQIRPGRIQYHLVRCAKQHPGLDMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESRPDHHHHRWENPVVYGSSLIPFEEPKPQSR---PLYNP 136 ++ P + C Y+ SH + R+Q HLV+C++ HP + ICP+NA HHV + H+ NC DR +IE K+ L +S H E P Y IP +E ++ P+YNP Sbjct: 3 IEDPIVQCQYDPSHSVLKSRLQMHLVKCSRNHPLANKAICPFNAVHHVDKPNYQYHINNCPDRRVIEGYKYELEDSE---HGDLAETP--YHQPSIPPDEDTWEAETPVPMYNP 111
BLAST of gametocyte-specific factor 1 vs. nr
Match: gi|939627378|ref|XP_014276998.1| (PREDICTED: uncharacterized protein LOC106681148 isoform X3 [Halyomorpha halys]) HSP 1 Score: 79.337 bits (194), Expect = 5.473e-13 Identity = 34/90 (37.78%), Postives = 53/90 (58.89%), Query Frame = 0 Query: 29 PTITCPYNASHQIRPGRIQYHLVRCAKQHPGLDMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESRPDHHHHRWENPVVYGS 118 PT+TCPYN +H I R+Q+HL +C QHP + +CP+N+TH +P+ + HL C DR +++A ++G S H P++ S Sbjct: 6 PTLTCPYNKAHSIISSRMQFHLTKCRIQHPTNEKAVCPFNSTHVIPQCEYAYHLSFCPDRIVLDAFTCKVGSSNAPKVDHTTVEPIIVKS 95
BLAST of gametocyte-specific factor 1 vs. nr
Match: gi|1330932218|gb|PNF42469.1| (hypothetical protein B7P43_G08740 [Cryptotermes secundus]) HSP 1 Score: 78.5666 bits (192), Expect = 7.574e-13 Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 0 Query: 26 MDVPTITCPYNASHQIRPGRIQYHLVRCAKQHPGLDMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGESRPDHHHHRWENPVVYGSSLIPFEEPKPQSR---PLYNP 136 ++ P + C Y+ SH + R+Q HLV+C++ HP + ICP+NA HHV + H+ NC DR +IE K+ L +S H E P Y IP +E ++ P+YNP Sbjct: 3 IEDPIVQCQYDPSHSVLKSRLQMHLVKCSRNHPLANKAICPFNAVHHVDKPNYQYHINNCPDRRVIEGYKYELEDSE---HGDLAETP--YHQPSIPPDEDTWEAETPVPMYNP 111
BLAST of gametocyte-specific factor 1 vs. nr
Match: gi|939627376|ref|XP_014276918.1| (PREDICTED: uncharacterized protein LOC106681148 isoform X2 [Halyomorpha halys]) HSP 1 Score: 77.7962 bits (190), Expect = 1.861e-12 Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 0 Query: 22 HRPSMDV--PTITCPYNASHQIRPGRIQYHLVRCAKQHPGLDMFICPYNATHHVPRHQETSHLMNCDDRDIIEAQKFRLGES 101 + +MD PT+TCPYN +H I R+Q+HL +C QHP + +CP+N+TH +P+ + H+ C+DR +++ R+G S Sbjct: 3 EKSNMDAAEPTLTCPYNKAHSIISSRMQFHLTKCRIQHPTNEKAVCPFNSTHVIPQCEYACHIEFCEDRRVMDRFTSRVGSS 84 The following BLAST results are available for this feature:
BLAST of gametocyte-specific factor 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of gametocyte-specific factor 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 5
BLAST of gametocyte-specific factor 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold712_size108441:31900..33076+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold712_size108441-snap-gene-0.28 ID=maker-scaffold712_size108441-snap-gene-0.28|Name=gametocyte-specific factor 1|organism=Tigriopus kingsejongensis|type=gene|length=1177bp|location=Sequence derived from alignment at scaffold712_size108441:31900..33076+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'gametocyte-specific factor 1' has the following synonyms
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