atp-dependent rna helicase, snap_masked-scaffold1_size3401120-processed-gene-10.1 (gene) Tigriopus kingsejongensis

Overview
Nameatp-dependent rna helicase
Unique Namesnap_masked-scaffold1_size3401120-processed-gene-10.1
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000004918 (supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989:-1 gene:EMLSAG00000004918 transcript:EMLSAT00000004918 description:"maker-LSalAtl2s259-augustus-gene-10.16")

HSP 1 Score: 274.633 bits (701), Expect = 1.357e-87
Identity = 155/353 (43.91%), Postives = 220/353 (62.32%), Query Frame = 0
Query:    1 MSFDSLG-LDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNA---TTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTA-ERIDQKVYFAEKHDKIRLLGGLIEE--GEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLA 346
            +SFD +  L    L+  +S  + +P+PIQ+   P V +G D++  A+TG+GKT  FS+P L  +S   +R      + P  L+V PTRELA Q    L+  G E+     +  V+GGV    Q   LK GV++LVATPGRLLDL ++G + L+ +  +VLDEADRMLD GF  DI+++L    K+RQT LFSAT+   IR LA   L +P+ + +   +  A + + Q V   ++  +   + GL+ +   + N++L+F   K  A+RL   L K  +N   IHG+KSQ+AR +A+E FKSG+I IL+ATDVAARG+DI  + YV+NY  P   EDYVHRIGRTGRAGK+G+A
Sbjct:  109 LSFDDMSSLGKKCLKCCKS--FKAPTPIQSMTWPVVASGRDVIGIAETGSGKTLAFSVPALAHISERKQRPVKGVNSMPIMLIVAPTRELAMQSQVVLESAGKEI--GFKSLCVYGGVNKYAQRQSLKSGVEILVATPGRLLDLAEEGCVDLSGVSYVVLDEADRMLDQGFEQDIRRILGQTHKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKTVTQIVEVVDERSRDGKIKGLLNKYHKKKNRILIFVLYKREADRLWNSL-KHEWNCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAGKSGIA 456          
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000005110 (supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1 gene:EMLSAG00000005110 transcript:EMLSAT00000005110 description:"maker-LSalAtl2s26-augustus-gene-8.40")

HSP 1 Score: 274.633 bits (701), Expect = 2.624e-86
Identity = 161/383 (42.04%), Postives = 228/383 (59.53%), Query Frame = 0
Query:    2 SFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLL---------QILSTSGKRKNATTPRALVVTPTRELAAQVGESLQK--YGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKL--MPK--KRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEG----------EWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVS-LPDGNRVAAK 358
             F  + +   +   ++ + Y+ P+P+Q  AIPA+  G D++A AQTG+GKTA F +P+L         Q    S  +++   P AL++ PTRELA Q+ +  +K  Y S + P     +V+GG  +  Q+  L RG  +LVATPGRL+D+  +G ISL + + LVLDEADRMLDMGF   I+K+++   MP   +RQTL+FSATF KEI+ LA   L N + + V    +T+E I QK+ + ++ DK   L  L+E            + +  LVF  T+  A++L E L K GF   +IHG+++Q  R  AL  F+SG   ILVAT VAARG+DI  + +V+N++LP   E+YVHRIGRTGR G  GLA S   D NR   K
Sbjct:  181 DFMDINMAEIMANNIKLANYSKPTPVQKHAIPAITNGRDLMACAQTGSGKTAAFLVPILNRIFEGGPPQPAPHSKNKRSKQYPMALILAPTRELATQIFDEAKKFAYRSLVQPC----VVYGGANVFEQMMDLDRGCHLLVATPGRLVDMLDRGKISLEQCKYLVLDEADRMLDMGFEPQIRKIVENDNMPPAGQRQTLMFSATFPKEIQMLARDFLANYIFLAVGRVGSTSENITQKIVWVDELDKRSFLLDLLEAAGLAKGPAGNEDSSLTLVFVETRKGADQLDEYLYKEGFPVTSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGRMGNLGLATSFFNDRNRNLTK 559          
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000002581 (supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803:-1 gene:EMLSAG00000002581 transcript:EMLSAT00000002581 description:"maker-LSalAtl2s151-snap-gene-13.39")

HSP 1 Score: 257.684 bits (657), Expect = 2.700e-81
Identity = 141/358 (39.39%), Postives = 207/358 (57.82%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLP-LLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLL--INPVSIEVAPRNTTAER-IDQKVYFAEKHDKIRLLGGLIE---EGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSLPD 351
             SF   G    L+  ++S G+ +P+ IQAQ  P    G +I+A  +TG+GKT GF LP L  ++    +R     P  L++ PTRELA Q+   +  + S++     T  + GG     QI  L RG +++VATPGRL+DL + G + L     +VLDEADRMLDMGF   I+K+++ +   RQ L++SAT+  E+++LA       +   + +      A + I Q   F E+ +K+  +  ++E   E E  +VL+F  TK   ++L  +L    F    IHG+K+Q  RT+AL+ F+SG I ILVATDVA+RG+D+N +  V+NY+ P   EDYVHRIGRTGR  K G + S  D
Sbjct:   78 FSFQETGFPLGLIERIKSHGFEAPTAIQAQGWPIATNGKNIIAIGETGSGKTLGFVLPGLCHLMRXPPRRNRGDGPVVLIIAPTRELAEQIHNVVDGFASKIP----TACLVGGNHKQGQIRDLNRGAEIVVATPGRLIDLMEDGDVDLKRCSYMVLDEADRMLDMGFEPQIRKIMRQVRPDRQLLMWSATWPSEVQSLAHDFFGGTDYAHVNIGSSELXANKLIMQDFKFCERFEKMDSIKEILESLSEVESKKVLIFAATKIRVDQLVRKLKYWNFVVDGIHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVINYDFPNNIEDYVHRIGRTGRCSKEGKSFSFFD 431          
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000011390 (supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1 gene:EMLSAG00000011390 transcript:EMLSAT00000011390 description:"augustus_masked-LSalAtl2s787-processed-gene-0.30")

HSP 1 Score: 265.388 bits (677), Expect = 7.825e-81
Identity = 138/357 (38.66%), Postives = 214/357 (59.94%), Query Frame = 0
Query:    7 GLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQG---VISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVY-FAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMA-IHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL--PDGNRVA 356
            G+   +L  ++ +GY  P+PIQ QAIP +++G D++  A+TG+GKT  F LPL + +    + +    P A+++TPTREL  Q+G+ ++K+   +  A++   V+GG  I+ QIA LKRG +++V TPGR++D+       V +   I  +VLDEADRM DMGF   + +++      +Q ++FSATF +++  LA  +L  PV + V  R+   + IDQ VY   E+H  ++LL  L +      +++F   +  A+ L + L    + S A +HG   Q  R   +  FK+G+++ILVAT VAARG+D+ +L  VVNY+ P   EDYVHR GRTGRAG +G A +   P+  R A
Sbjct:  228 GVSQRILDLLKRNGYEKPTPIQTQAIPIIMSGRDMIGIAKTGSGKTLAFLLPLFRHIMAQPELEEGDGPIAIIMTPTRELCMQIGKEIKKFSKAIKGARSV-CVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNCRRITYVVLDEADRMFDMGFEPQVSRIIDNCRPDKQMVMFSATFPRQMEALARRILCKPVEVTVGGRSVVCKDIDQSVYVLEEEHKFLKLLELLGQRSSEGLIIIFVDKQEHADSLLKDLMSASYTSCASLHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGNSGFAATFLTPEQGRYA 583          
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000011189 (supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1 gene:EMLSAG00000011189 transcript:EMLSAT00000011189 description:"maker-LSalAtl2s760-augustus-gene-3.33")

HSP 1 Score: 260.766 bits (665), Expect = 1.318e-79
Identity = 147/367 (40.05%), Postives = 212/367 (57.77%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAER-IDQKVYFAEKHDKIRLLGGLIEE---GEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL-PDGNRVAAKPDVD 362
            + F   G    +L+  +  G+  P+ IQ+Q  P  L+G++++  A TG+GKT G+ LP +  ++     +    P  LV+ PTRELA Q+ E   ++G       T   +FGG    PQ+  L+RG ++++ATPGRL+D+ + G I++     LVLDEADRMLDMGF   I+K+++ +   RQ L++SAT+ KE+R LAE  L + V I +      A   I Q V   E   K   L  L+EE      N++L+F  TK  A+ LT  + + G+ +M IHG+K Q  R   L  FK G   IL ATDVAARG+D++ + +V+NY+ P  SEDY+HRIGRTGR  + G A +L   GN   AK  VD
Sbjct:  115 LDFTEAGFPDYILKEFKRQGFERPTAIQSQGWPIALSGSNMVGIAMTGSGKTCGYLLPGIIHVNNQPYLEEGDGPIVLVLAPTRELAQQIQEVASEFGRTSRIKSTC--IFGGAPKGPQLRDLERGCEIVIATPGRLIDILEMGKINMRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRRLAEDFLDDYVHINIGAATLHANHNILQIVDVCEDFQKEEKLARLLEEIGCEPHNKILIFVETKRKADELTRLMRRDGYPAMCIHGDKQQKERDWVLGEFKHGATTILXATDVAARGLDVDDVKFVINYDYPNNSEDYIHRIGRTGRKDRTGTAYTLFTSGNSAKAKDLVD 479          
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000010143 (supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1 gene:EMLSAG00000010143 transcript:EMLSAT00000010143 description:"augustus_masked-LSalAtl2s66-processed-gene-7.1")

HSP 1 Score: 252.677 bits (644), Expect = 2.225e-79
Identity = 136/341 (39.88%), Postives = 206/341 (60.41%), Query Frame = 0
Query:   13 LRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLP-LLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTA-ERIDQKVYFAEKHDKI--RLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            + A++  G+ +PSPIQ QA P +L G D++  AQTGTGKT  F LP  + I S S  R+    P  LV++PTRELA Q+ + ++KY         +  V+GG     Q+  + +GV +++ATPGRL DL + G I++  I  LVLDEADRMLDMGF   I+K+L  +   RQT++ SAT+   +R LA   + +P+++ +   +  A   + QK++  E  ++   RLL         ++ ++F + K   +  +  LC  G +  +IHG + Q  R +AL  FK G +RIL+ATDVA+RGID+  + +V+N++ P   E+YVHRIGR+GRAGK G ++S 
Sbjct:    1 MTAIQKRGFKNPSPIQCQAWPYLLKGLDLIGIAQTGTGKTLAFLLPSFIHIDSQSIPREKRGGPNVLVLSPTRELALQIADEVKKYEYR---GIKSVCVYGGGDRKAQVKVVTQGVQIVIATPGRLNDLIESGCIAVESITYLVLDEADRMLDMGFEPQIRKILLDVRPDRQTVMTSATWPPGVRRLASNYMKDPITVSIGSLDLAAVHSVTQKIFVVESEEEKDDRLLDFFNNMTPEDKAIIFMSKKAKVDDYSSSLCLAGVDCQSIHGGRDQMDREQALLDFKLGHVRILIATDVASRGIDVEDISHVINFDFPNSMEEYVHRIGRSGRAGKKGSSISF 338          
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000008048 (supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1 gene:EMLSAG00000008048 transcript:EMLSAT00000008048 description:"maker-LSalAtl2s479-augustus-gene-2.18")

HSP 1 Score: 257.684 bits (657), Expect = 6.411e-79
Identity = 147/371 (39.62%), Postives = 208/371 (56.06%), Query Frame = 0
Query:    8 LDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLL---QILSTSGKRKNATT-PRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMP-------------------------KKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            L P +L  +E  GYT P+PIQ QAIP  L   DI+  A+TG+GKT  F LPLL   Q L  + + ++    P A+++ PTRELA Q+ E    +G  L     T  V GG+    Q  +L+ G ++++ATPGRL+D+ +   + L+    +VLDEADRM+DMGF  D++K+L  MP                         K RQT++F+AT    +  LA   L  P  + +       ER++Q VY  +++DK   L  ++  G    +++F   K  A++L + L KMG+N+  +HG K Q  R  AL G K+G   ILVATDVA RGIDI  +  V+NY++ K  E Y HRIGRTGRAGK+G A+S 
Sbjct:  331 LSPEILEIIEKVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTCAFLLPLLVWIQSLPKTTRMEDQDQGPYAIIMAPTRELAQQIEEECNTFGGPL--GIXTVAVIGGLSREDQGFKLRLGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDNDEAENEAALLENIRSKNKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSIGRPVERVEQVVYMMKENDKRNKLISILNNGIEPPIIIFVNQKKGADKLAQGLEKMGYNAATLHGGKGQEQREYALSGLKAGNKDILVATDVAGRGIDIKNVSLVINYDMAKSIEPYTHRIGRTGRAGKSGKAISF 699          
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9")

HSP 1 Score: 239.195 bits (609), Expect = 1.324e-74
Identity = 136/351 (38.75%), Postives = 210/351 (59.83%), Query Frame = 0
Query:    2 SFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLD-LQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKK--RQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            +F  LGL   L  A ES G+ +PS IQ +AIP  L G DI+  A+TG+GKTA F+LP+LQ L    +R  A     LV+TPTRELA Q+ E  +K G   S      ++ GG+ +  Q   L +   +++ATPGRL+D ++      L  ++ L++DEADR+L+M F  ++ K+L  +P+   R+ +LFSAT +K++  L    L +PV +EV+ +  T +++ Q   F     K   L  +I E   N  ++F++T     +L   L  +GF ++ ++G  SQN R  +L  FK+    IL+ATDVA+RG+DI  +  V+NY++P  S+DY+HR+GRT RAG++G A++ 
Sbjct:   25 TFSDLGLTEVLCEACESLGWKTPSKIQKEAIPVALTGRDIIGLAETGSGKTAAFALPVLQSLLEKPQRFFA-----LVLTPTRELAYQISEQFEKLGK--SIGVKCVVLVGGMDMVSQALVLGKKPHIIIATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSALPRGEGRKNMLFSATMTKKVAKLQRASLRDPVRVEVSSKYQTVDKLLQYYLFIPLKYKEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGRAITF 368          
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000001805 (supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1 gene:EMLSAG00000001805 transcript:EMLSAT00000001805 description:"maker-LSalAtl2s1306-augustus-gene-0.42")

HSP 1 Score: 242.662 bits (618), Expect = 1.797e-74
Identity = 136/342 (39.77%), Postives = 207/342 (60.53%), Query Frame = 0
Query:   19 SGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILS---TSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKI-NPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLK--LMP--KKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWN---QVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
              YT P+P+Q  A+P +L  +D+++ AQTG+GKTA F LP++  L     S    +  TPR L++ PTREL  Q+ +  +KY ++++     ++++GG    + +   L   VD+L ATPGRL+D+  +  IS   IE LV+DEADRML+MGF   I +++    MP   KRQTLLFSATF  EI+ LA   L + + ++V      +E I+Q +   + ++K+  L   ++E E N   ++L+F   K   + L  RLC     + +IHG++ Q  R +AL  FK G   ILVAT+VA+RG+DI ++  V+NY+LP+    YVHRIGR+GR G +G ++S 
Sbjct:  182 CSYTRPTPVQKHAVPIILMKHDLISCAQTGSGKTAXFLLPIIHSLHKKRISSNSSDKATPRTLILGPTRELVVQINDEARKYCAKMN--IDCRVIYGGSSTESSKYILLNNRVDILSATPGRLIDMLGKEHISFENIEFLVIDEADRMLEMGFRESIDEVVNHFTMPGTTKRQTLLFSATFPPEIQILASEYLKDYLFLKVGVVGGASEDIEQVIVQVKDYEKMTKLLETLKENEVNPETKILIFARKKRGVDFLATRLCLDKHPATSIHGDRFQEQREEALRDFKRGSKPILVATEVASRGLDIPKVSLVINYDLPQDISTYVHRIGRSGRVGNSGKSISF 521          
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000000395 (supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:1 gene:EMLSAG00000000395 transcript:EMLSAT00000000395 description:"augustus_masked-LSalAtl2s1063-processed-gene-0.12")

HSP 1 Score: 240.35 bits (612), Expect = 1.650e-72
Identity = 144/360 (40.00%), Postives = 208/360 (57.78%), Query Frame = 0
Query:    2 SFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVF--GGVKINPQIARLKRGVDVLVATPGRLLD-LQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQ---KVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSLP-DGNR 354
            SF ++ L   LL+A+E   Y  P+PIQA  IP  LAG D+   A TGTGKTA + LP+L+ L     R N +  R +V+ PTREL  QV +       +LS   +  I    GG+ +  Q   L++  D+++ATPGRL+D ++      L  IE+L+LDEADRMLD  F+  +K+++K    KRQTLLFSAT + ++  L+   L  PV I V      A  + Q   ++    + D+  +L  L+     +  +VF  TK   +RL   L  +G     +HGN SQ  R ++L+ FK  EI +L+ TDVAARG+DI+ +  V+NY LP   E Y+HR+GRT RAG+AG +VS+  +G+R
Sbjct:  183 SFYAMXLSRPLLKAIEXLRYVHPTPIQASTIPVALAGRDVCGCAATGTGKTAXYMLPILERLLF---RPNQSITRVIVLVPTRELGVQVYQ----VSKQLSQFTSIDIALSVGGLDLKAQELALRKNPDIVIATPGRLIDHIKNTPTFGLENIEVLILDEADRMLDECFLEQMKEIVKSCSPKRQTLLFSATMTDKVNDLSTMALRKPVKIFVDSNKVVAWNLRQEFVRIRANRESDREGILAALVCRTFRDHTIVFIQTKVQCHRLLILLSLLGVRVGELHGNLSQPQRLESLKKFKEEEIDVLITTDVAARGLDISGVKTVINYTLPTTLEHYIHRVGRTARAGRAGRSVSIAGEGDR 535          
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|548730|sp|P25888.3|RHLE_ECOLI (RecName: Full=ATP-dependent RNA helicase RhlE)

HSP 1 Score: 444.121 bits (1141), Expect = 3.005e-153
Identity = 223/350 (63.71%), Postives = 269/350 (76.86%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTP-RALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            MSFDSLGL P +LRAV   GY  P+PIQ QAIPAVL G D++A+AQTGTGKTAGF+LPLLQ L T         P RAL++TPTRELAAQ+GE+++ Y   L+    + +VFGGV INPQ+ +L+ GVDVLVATPGRLLDL+ Q  + L ++EILVLDEADRMLDMGFIHDI+++L  +P KRQ LLFSATFS +I+ LAE LL NP+ IEVA RNT ++++ Q V+F +K  K  LL  +I +G W QVLVFT TKH AN L E+L K G  S AIHGNKSQ ART+AL  FKSG+IR+LVATD+AARG+DI +LP+VVNYELP V EDYVHRIGRTGRA   G A+SL
Sbjct:    1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNI--RSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSL 348          
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|677995702|sp|B9XXL6.1|RHPA_HELP8 (RecName: Full=DEAD-box ATP-dependent RNA helicase RhpA)

HSP 1 Score: 298.901 bits (764), Expect = 6.597e-96
Identity = 154/348 (44.25%), Postives = 222/348 (63.79%), Query Frame = 0
Query:    2 SFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            SF+ LGL  ++L++V  +G+TSPSPIQ +AIPAVL G D++A AQTGTGKTA F+LP++  L      KN  T  ALV+TPTRELA Q+ + + K G        T  V+GG  +  Q   +K+   V++ATPGRLLD  +   I     +++VLDE+D MLDMGF+ DI+++   +P + Q LLFSAT  + I+ LA+ +L NP+ I +AP N T   I Q+ Y   +H++   +  L++     + +VFT TK  A+ L + L    + S A+HG+  Q  R  ++  FK  +  +LVATDVA+RG+DI+ + +V NY LP  +E Y+HRIGRTGRAGK G+A++L
Sbjct:   21 SFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIINNL------KNNHTIEALVITPTRELAMQISDEIFKLGKHTR--TKTVCVYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVINEHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASIMAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL 360          
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|81815103|sp|O25029.1|RHPA_HELPY (RecName: Full=DEAD-box ATP-dependent RNA helicase RhpA)

HSP 1 Score: 298.901 bits (764), Expect = 7.671e-96
Identity = 154/348 (44.25%), Postives = 222/348 (63.79%), Query Frame = 0
Query:    2 SFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            SF+ LGL  ++L++V  +G+TSPSPIQ +AIPAVL G D++A AQTGTGKTA F+LP++  L      KN  T  ALV+TPTRELA Q+ + + K G        T  V+GG  +  Q   +K+   V++ATPGRLLD  +   I     +++VLDE+D MLDMGF+ DI+++   +P + Q LLFSAT  + I+ LA+ +L NP+ I +AP N T   I Q+ Y   +H++   +  L++     + +VFT TK  A+ L + L    + S A+HG+  Q  R  ++  FK  +  +LVATDVA+RG+DI+ + +V NY LP  +E Y+HRIGRTGRAGK G+A++L
Sbjct:   21 SFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIINNL------KNNHTIEALVITPTRELAMQISDEIFKLGKHTR--TKTVCVYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVINEHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRSSIMAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL 360          
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|32363412|sp|Q9HXE5.1|RHLB_PSEAE (RecName: Full=ATP-dependent RNA helicase RhlB >gi|122261039|sp|Q02S21.1|RHLB_PSEAB RecName: Full=ATP-dependent RNA helicase RhlB >gi|226739542|sp|B7UUT0.1|RHLB_PSEA8 RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 294.664 bits (753), Expect = 1.783e-95
Identity = 154/368 (41.85%), Postives = 228/368 (61.96%), Query Frame = 0
Query:    3 FDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLL-QILSTSG-KRKNATTPRALVVTPTRELAAQVGE---SLQKYGSELSPAQTTQIVFGGVKINPQIARLK-RGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKK--RQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSLPDGNRVAAKPDVD 362
            F    L P+L+ A+   G+   +PIQAQ +   L G D +  AQTGTGKTA F + ++ Q+L T   K +    PRAL++ PTREL  Q+ +   +L KY              GG+  + Q+ +L+ R  D+LVATPGRLLD  Q+G + L  +E++VLDEADRMLDMGFI  ++++++  P K  RQTLLFSATF+ ++  LA+   ++P  +E+ P N  ++ ++Q VY     DK +LL  L+ +  W +V+VF   K    R+ ERL K G ++  + G+  Q+ R + LEGF+ G+IR+LVATDVA RGI I+ + +V+N+ LP+  +DYVHRIGRTGRAG +G ++S    +   A P ++
Sbjct:   11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYT-----GLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIE 373          
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|32363284|sp|Q887N8.1|RHLB_PSESM (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 286.96 bits (733), Expect = 1.615e-92
Identity = 148/355 (41.69%), Postives = 221/355 (62.25%), Query Frame = 0
Query:    3 FDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSG--KRKNATTPRALVVTPTRELAAQVGES---LQKYGSELSPAQTTQIVFGGVKINPQIARLK-RGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKK--RQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            F    L P L+ A++  G+   +PIQA  +   L G D +  AQTGTGKTA F + +++ L+ +     +    PRAL++ PTREL  Q+ +    L KY +            GG+  + Q+ +L+ R  D+LVATPGRLLD  Q+G + L  +E++VLDEADRMLDMGFI  ++++++  P K  RQTLLFSATF++++  LA+    +P  +E+   N  ++ ++Q +Y     DK +LL  L+ +  W +V+VF   K    R+ ERL + G N+  + G+  Q+ R K LEGF+ G+IR+LVATDVA RGI I+ + +V+N+ LP+V +DYVHRIGRTGRAG  G+++S 
Sbjct:   10 FHDFNLAPELMHAIQDLGFPYCTPIQAGVLGFTLKGKDAIGRAQTGTGKTAAFLISIIEQLTQTPPPAERYMGEPRALIIAPTRELVVQIAKDAADLTKYTN-----LNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTEDVMNLAKQWTTDPSIVEIESLNVASDNVEQHIYAVAGADKYKLLYNLVTDNGWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISF 359          
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|74659403|sp|Q6BU54.1|DED1_DEBHA (RecName: Full=ATP-dependent RNA helicase DED1)

HSP 1 Score: 293.893 bits (751), Expect = 2.503e-92
Identity = 166/368 (45.11%), Postives = 232/368 (63.04%), Query Frame = 0
Query:    2 SFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLL---------QILSTSGK-RKNATTPRALVVTPTRELAAQVGESLQK--YGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKL--MP--KKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSLPDGN 353
            +F +  LDP L+  V+ S +T P+P+Q  ++P V AG D++A AQTG+GKT GF  P+L         ++  T+G    +   P ALV+ PTREL +Q+ +  +K  Y S + P+    +V+GG  I  QI  L+RG D+LVATPGRL DL ++G +SLA I+ LVLDEADRMLDMGF   I+ +++   MP  + RQTL+FSATF KEI+ LA   L   + + V    +T+E I QK+ + E  +K  +L  L+   +    ++FT TK  A+ L + L   GF + AIHG++SQ  R KAL  FK+G   ILVAT VAARG+DI  + ++VNY+LP   +DYVHRIGRTGRAG  G+A +  + N
Sbjct:  157 AFTAPPLDPLLVENVKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESYMNGPAEVPETAGAFSSHKVYPTALVMAPTRELVSQIFDEAKKFAYRSWVRPS----VVYGGADIGGQIRNLERGCDLLVATPGRLKDLLERGRVSLASIKYLVLDEADRMLDMGFEPQIRHIVQECDMPGVEDRQTLMFSATFPKEIQFLARDFLKEYIFLSVGRVGSTSENITQKILYVEDEEKKSVLLDLLSANDNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKTGTAPILVATAVAARGLDIPNVSHIVNYDLPSDIDDYVHRIGRTGRAGNIGIATAFFNRN 520          
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|32363346|sp|Q8PFZ3.1|RHLB_XANAC (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 291.197 bits (744), Expect = 6.214e-92
Identity = 167/412 (40.53%), Postives = 241/412 (58.50%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQ--ILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLD-LQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKK--RQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSLPDGNRVAAKPDVDGNSVNYTADVGNRPAYEPTGNER---RPQRPRRPGQGGQGGGQRG 404
            ++F S  L PAL+  +ES+G+T  +PIQA  +P  L G D+   AQTGTGKT  F + ++   ++  +   +    PRAL++ PTRELA Q+ +   K+G++L       +V+GGV  + Q   L++GVDV++ATPGRL+D ++Q  V+SL   EI VLDEADRM D+GFI DI+ LL+ MP++  RQTLLFSAT S  +  LA   +  P  + V   + TA R+ Q++YF    +K  LL GL+   E  + +VF  TK F  R+   L + G+    + G+  Q  R   L  F+ G++ ILVATDVAARG+ I+ + YV NY+LP  +EDYVHRIGRT R G+ G A+S        + PD++       A +  +   EP  +E     P+ PR P +G +     G
Sbjct:    9 VTFSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADL--GLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETESITAARVRQRIYFPSDEEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIE-------AYIEQKIPVEPVTSELLTPLPRAPRVPVEGEEADDDAG 411          
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|32363291|sp|Q88NB7.1|RHLB_PSEPK (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 284.648 bits (727), Expect = 1.412e-91
Identity = 148/355 (41.69%), Postives = 216/355 (60.85%), Query Frame = 0
Query:    3 FDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSG--KRKNATTPRALVVTPTRELAAQVGE---SLQKYGSELSPAQTTQIVFGGVKINPQIARLK-RGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKK--RQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            F    L   L+ A+   G+   +PIQAQ +   L G D +  AQTGTGKTA F + ++  L  +   K +    PRAL++ PTREL  Q+ +   +L KY              GG+  + Q+  L+ R  D+LVATPGRLLD  Q+G + L  +E++VLDEADRMLDMGFI  ++++++  P K  RQTLLFSATF+ ++  LA+    NP  +E+ P N  +E ++Q VY     DK +LL  L+ + +W +V+VF   K    R+ E+L + G N+  + G+  Q+ R + LE F+ G I +LVATDVA RGI I+ + +V+N+ LP+  +DYVHRIGRTGRAG +G+++S 
Sbjct:   11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYT-----GLNVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGRITVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISF 360          
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|223590230|sp|A5DQS0.3|DED1_PICGU (RecName: Full=ATP-dependent RNA helicase DED1)

HSP 1 Score: 290.041 bits (741), Expect = 8.162e-91
Identity = 162/364 (44.51%), Postives = 226/364 (62.09%), Query Frame = 0
Query:    2 SFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGK----------RKNATTPRALVVTPTRELAAQVGESLQK--YGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKL--MP--KKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            +F +  LDP ++  ++ S +T P+P+Q  ++P V +G D++A AQTG+GKT GF  P+L     +G             +   P ALV+ PTREL +Q+ E  +K  Y S + P     +V+GG  I  QI  L RG D+LVATPGRL DL ++G +SL+ I+ LVLDEADRMLDMGF   I+ +++   MP  + RQTL+FSATF ++I+ LA   L + + + V    +T+E I QKV + E  +K  +L  L+   +    ++FT TK  A+ L + L   GF + AIHG++SQ  R KAL  FKSG   ILVAT VAARG+DI  + +VVNY+LP   +DYVHRIGRTGRAG  G+A + 
Sbjct:  170 AFTAPPLDPLIVENIKLSRFTKPTPVQKYSVPIVASGRDLMACAQTGSGKTGGFLFPVLSESYMNGPDAVPESQGAFSSHKVHPTALVMAPTRELVSQIFEEAKKFSYRSWVRPC----VVYGGADIGTQIRNLDRGCDLLVATPGRLKDLLERGRVSLSNIKYLVLDEADRMLDMGFEPQIRHIVQECDMPGVESRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDDEKKSVLLDLLSANDNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGTAPILVATAVAARGLDIPNVSHVVNYDLPGDIDDYVHRIGRTGRAGNVGIATAF 529          
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|122300890|sp|Q088J2.1|RHLB_SHEFN (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 283.878 bits (725), Expect = 8.245e-91
Identity = 165/418 (39.47%), Postives = 242/418 (57.89%), Query Frame = 0
Query:    3 FDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLL-QILSTSG-KRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQT---TQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMP--KKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSLPDGNRVAAKPDVDGNSVNYTADVGNRPAYEPTGNERRPQRPRR--PGQGGQGGGQRGPGGQGRN 411
            F    L P +L A+  +G+   +PIQA ++P +L   DI   AQTGTGKT  F +     +L+ +  + + AT PRA+++ PTRELA Q+ +      ++L  A T     IV+GG     Q A L +GVD+L+ T GR++D  +QGVISL+ I+ +VLDEADRM D+GFI DI+ L + MP  K R  +LFSAT S +++ LA   + +P  +E+ P   T++ I +++++    DK+RLL  LIEE   ++ +VF+ TKH   +L   L   G     + G+  Q  R + LE F SGEI +LVATDVAARG+ I+ + +V NY+LP   EDYVHRIGRTGRAG+ G+++S          P+++   +N++  V N        +   P R  R  P    + GG +G    G N
Sbjct:   11 FADFPLKPEILAALNENGFEFCTPIQALSLPILLNAKDIAGQAQTGTGKTMAFLVATFNHLLNVAAPESRKATEPRAIIMAPTRELAIQIAKD-----AKLLAAHTGLKVGIVYGGESYETQRAVLDKGVDILIGTTGRIIDYVRQGVISLSHIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNDPEKVEIEPLEKTSKNIKEEIFYPSMEDKMRLLLSLIEEDWPDKAIVFSNTKHSCEKLWSYLEGDGHRVGLLTGDVPQKKRIRILEQFTSGEIDVLVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGISISFACEEYALNLPEIE-TYINHSIPVSNYDKDALLDDIPPPARIHRKPPTSRTRDGGSKGAHRSGGN 422          
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1198235011|ref|WP_086900249.1| (ATP-dependent RNA helicase RhlE [Kushneria marisflavi] >gi|1197437593|gb|ART63038.1| ATP-dependent RNA helicase RhlE [Kushneria marisflavi])

HSP 1 Score: 476.863 bits (1226), Expect = 1.410e-163
Identity = 237/355 (66.76%), Postives = 282/355 (79.44%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTS--GKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL--PD 351
            MSF  LGL P LLRA+E +GY +PSPIQ++AIPA L G D+LAAAQTGTGKTAGF+LP+L+ LS    G ++     RAL++TPTRELAAQ+GES++KYG  L P   + +V+GGVK+NPQIARL+ GVDVLVA PGRLLDL  Q  + L ++E LVLDEADRMLDMGFIHDIKK+L+L+PKKRQ LLFSATFSKEIR LA  LL NPVSI+VAPRNT AE +DQ +Y  EK  ++ LL  LI   +W+Q LVFT TKH ANR+T+ L K G  + AIHGNKSQNART AL GFKSGE++++VATDVAARGIDI++LP VVN+ELPK   DYVHRIGRTGRAG +G AVSL  PD
Sbjct:    1 MSFSQLGLSPELLRALEDAGYQTPSPIQSKAIPACLEGRDVLAAAQTGTGKTAGFTLPILERLSREPQGHKRPV---RALILTPTRELAAQIGESVEKYGVHLKPRLKSDVVYGGVKVNPQIARLRDGVDVLVACPGRLLDLVNQKAVRLDQVETLVLDEADRMLDMGFIHDIKKILRLVPKKRQNLLFSATFSKEIRELAGTLLDNPVSIDVAPRNTAAESVDQSIYMVEKPQRMALLTHLITHHQWSQALVFTATKHMANRVTQHLQKAGITAAAIHGNKSQNARTAALSGFKSGEVQVMVATDVAARGIDISELPNVVNFELPKTPADYVHRIGRTGRAGASGQAVSLVMPD 352          
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1343579608|gb|PPD49857.1| (ATP-dependent RNA helicase RhlE [Methylobacter sp.])

HSP 1 Score: 474.937 bits (1221), Expect = 1.708e-163
Identity = 239/362 (66.02%), Postives = 281/362 (77.62%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSLPDGNRVAAKPDVD 362
            M F +LGL   LLRA+  +GYT+PSPIQAQAIPAVL G+D+LAAAQTGTGKTAGF+LP+L  LS     KN    R L++TPTRELAAQVGES+ KYG+ L P   T+IVFGGVKINPQ+ RL+ GVD+LVATPGRLLDL  Q  + L ++E L+LDEADRMLDMGFI DI+K++ L PKKRQ LLFSATFS++IR L  GLL+NP+ IEVAPRNT AE ++Q  Y   K  K  LL  LI+  +W QVLVFTTTKH ANRLTE+L  +G  + AIHGNKSQ ART AL GFK+GEIR+LVATDVAARGIDI  LP+VVN+ELPKV EDYVHRIGRTGRAG+ G A+SL   + V A   V+
Sbjct:    1 MPFTTLGLSDPLLRAIADAGYTTPSPIQAQAIPAVLNGHDVLAAAQTGTGKTAGFTLPILHRLSQKSYDKNRPV-RCLILTPTRELAAQVGESVGKYGAHLHPRLKTEIVFGGVKINPQMMRLRGGVDILVATPGRLLDLLSQNAVKLDQVETLILDEADRMLDMGFIRDIRKIIALCPKKRQNLLFSATFSEDIRKLTTGLLVNPIKIEVAPRNTAAELVEQIAYLTNKASKTGLLCHLIKTNDWQQVLVFTTTKHGANRLTEKLNNVGIKAAAIHGNKSQGARTSALAGFKAGEIRVLVATDVAARGIDIALLPHVVNFELPKVPEDYVHRIGRTGRAGEEGQAISLISHDEVNALRQVE 361          
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1348907824|ref|WP_104423713.1| (ATP-dependent RNA helicase RhlE [Methylobacter tundripaludum] >gi|1346752325|gb|PPK71841.1| ATP-dependent RNA helicase RhlE [Methylobacter tundripaludum])

HSP 1 Score: 474.937 bits (1221), Expect = 1.946e-163
Identity = 231/349 (66.19%), Postives = 278/349 (79.66%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            M F +LGL   LLRA+  +GYT+PSPIQ+QAIPAVL G+D+LAAAQTGTGKTAGF+LP+L  LS      N    R L++TPTRELAAQ+GES+ KYG+ L P   +++VFGGVKINPQ+ RL+ GVD+LVATPGRLLDL  Q  + L ++E L+LDEADRMLDMGFI DI+K++ L+PKKRQ LLFSATFS++IR L  GLL+NP+ IEVAPRNT AE ++Q  Y   K +K  LL  LI+E +W QVLVFTTTKH ANRLTE+L K+   + AIHGNKSQ ART AL GFK+GEIR+LVATDVAARGIDIN LP+VVN+ELP+  EDYVHRIGRTGRAG+ G A+SL
Sbjct:    1 MPFTTLGLSDPLLRAIADAGYTTPSPIQSQAIPAVLGGHDVLAAAQTGTGKTAGFTLPILHRLSQKAYTNNRPV-RVLILTPTRELAAQIGESVSKYGAHLHPRLKSEVVFGGVKINPQMMRLRGGVDILVATPGRLLDLVNQNAVKLDQVETLILDEADRMLDMGFIRDIRKIIALLPKKRQNLLFSATFSEDIRKLTTGLLVNPIKIEVAPRNTAAELVEQVAYLVNKANKTELLCHLIKEHDWRQVLVFTTTKHGANRLTEKLNKINIKAAAIHGNKSQGARTSALAGFKAGEIRVLVATDVAARGIDINLLPHVVNFELPRAPEDYVHRIGRTGRAGEEGQAISL 348          
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1093981390|ref|WP_070979946.1| (ATP-dependent RNA helicase RhlE [Kushneria sp. YCWA18] >gi|1092294756|gb|OHV08775.1| ATP-dependent RNA helicase RhlE [Kushneria sp. YCWA18])

HSP 1 Score: 476.093 bits (1224), Expect = 2.264e-163
Identity = 257/428 (60.05%), Postives = 304/428 (71.03%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILS---TSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL--PDG-------NRVAAKPDVDGNSVNYTADVGNRPAYEPTGNERRP-----QRPRRPGQGGQGGGQRGPGGQGRN 411
            MSF  LGL P LLRAVE++GY +PSPIQA+AIPA L G D+LAAAQTGTGKTAGF+LP+LQ LS    +G+R      RAL++TPTRELAAQV ES++KYG+ LSP   + +V+GGVKINPQI RL+ GVD+LVA PGRLLDL  Q  + L ++E LVLDEADRMLDMGFIHDI+K+LKL+P++RQTLLFSATFS EIR LA+ LL  PVSI+VAPRNT AE +DQ VY  +K  K  LL  LI + +  Q LVFT TKH ANR+T+ L K G  + AIHGNKSQNART AL GFKSGE+RILVATDVAARGIDI  LP+V+N+ELP V  DYVHRIGRTGRAG +G A+SL  PD         R+  KP     S N+ A           G    P     +R  RP  G +    RG GG+ RN
Sbjct:    1 MSFSELGLAPELLRAVEAAGYHTPSPIQAKAIPACLEGRDVLAAAQTGTGKTAGFTLPILQRLSRQPVTGRR----AVRALILTPTRELAAQVHESVEKYGAALSPRLESDVVYGGVKINPQINRLREGVDILVACPGRLLDLVSQKAVRLDQVETLVLDEADRMLDMGFIHDIRKILKLVPQQRQTLLFSATFSSEIRQLADKLLDQPVSIDVAPRNTAAETVDQSVYKIDKPSKTALLVHLIRQQQLEQALVFTATKHMANRVTKNLQKAGITAAAIHGNKSQNARTSALNGFKSGEVRILVATDVAARGIDIAHLPHVINFELPNVPADYVHRIGRTGRAGASGSAMSLVAPDERDQLKGIERLIGKPVPVHESKNFDARAVQEELSSAGGQTEDPGPPGQRRNARPAGGQRQQRSRGQGGRERN 424          
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1197586166|ref|WP_086621375.1| (ATP-dependent RNA helicase RhlE [Kushneria konosiri] >gi|1196021791|gb|ARS52618.1| ATP-dependent RNA helicase RhlE [Kushneria konosiri])

HSP 1 Score: 475.322 bits (1222), Expect = 5.707e-163
Identity = 237/354 (66.95%), Postives = 282/354 (79.66%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTP-RALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL--PD 351
            MSF  LGL P LLRA+E +GY +PSPIQ++AIPA L G D+LAAAQTGTGKTAGF+LP+L+ LS   K +    P RAL++TPTRELAAQ+GES++KYG  L P   + +V+GGVK+NPQIARL+ GVDVLVA PGRLLDL  Q  + L ++E LVLDEADRMLDMGFIHDIKK+L+L+PK+RQ LLFSATFSKEIR LA  LL NPVSI+VAPRNT AE +DQ +Y  EK  ++ LL  LI   +W+Q LVFT TKH ANR+T+ L K G  + AIHGNKSQNART AL GFKSGE++++VATDVAARGIDI++LP VVN+ELPK   DYVHRIGRTGRAG +G AVSL  PD
Sbjct:    1 MSFSQLGLSPELLRALEDAGYQTPSPIQSKAIPACLEGRDVLAAAQTGTGKTAGFTLPILERLSR--KPQGHKRPVRALILTPTRELAAQIGESVEKYGVHLKPRLKSDVVYGGVKVNPQIARLRDGVDVLVACPGRLLDLVNQKAVRLDQVETLVLDEADRMLDMGFIHDIKKILRLVPKQRQNLLFSATFSKEIRELAGTLLNNPVSIDVAPRNTAAESVDQSIYMVEKPQRMALLTHLITHHQWSQALVFTATKHMANRVTQHLQKAGITAAAIHGNKSQNARTAALSGFKSGEVQVMVATDVAARGIDISELPNVVNFELPKTPADYVHRIGRTGRAGASGQAVSLVMPD 352          
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1222075770|ref|WP_090132494.1| (ATP-dependent RNA helicase RhlE [Kushneria avicenniae] >gi|1097387640|emb|SFC47209.1| ATP-dependent RNA helicase RhlE [Kushneria avicenniae])

HSP 1 Score: 473.781 bits (1218), Expect = 2.043e-162
Identity = 238/356 (66.85%), Postives = 282/356 (79.21%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILST---SGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL--PD 351
            MSF  LGL P LLRA+E +GY +PSPIQ++AIPA L G D+LAAAQTGTGKTAGF+LP+L+ LS    SGKR      RAL++TPTRELAAQ+GES++KYG  LSP   + +V+GGVK+NPQI RL+ GVD+LVA PGRLLDL  Q  + L E+E LVLDEADRMLDMGFIHDIKK+L+L+P KRQ LLFSATFSKEIR LA  LL +PVSI+VAPRNT AE +DQ +Y  EK  ++ LL  LI   +W+Q LVFT TKH ANR+T+ L K G  + AIHGNKSQNART AL GFKSGE++++VATDVAARGIDI++LP VVN+ELPK   DYVHRIGRTGRAG +G AVSL  PD
Sbjct:    1 MSFSQLGLSPELLRALEDAGYQTPSPIQSKAIPACLEGRDVLAAAQTGTGKTAGFTLPILERLSRQPRSGKRPV----RALILTPTRELAAQIGESVEKYGVHLSPRLKSDVVYGGVKVNPQITRLRDGVDILVACPGRLLDLVGQKAVRLDEVETLVLDEADRMLDMGFIHDIKKILRLVPGKRQNLLFSATFSKEIRELAGTLLNDPVSIDVAPRNTAAESVDQSIYMVEKPQRMALLTHLITHHQWSQALVFTATKHMANRVTQHLQKAGITAAAIHGNKSQNARTAALSGFKSGEVQVMVATDVAARGIDISELPNVVNFELPKTPADYVHRIGRTGRAGASGQAVSLVMPD 352          
BLAST of atp-dependent rna helicase vs. nr
Match: gi|652888017|ref|WP_027148013.1| (ATP-dependent RNA helicase RhlE [Methylobacter tundripaludum])

HSP 1 Score: 472.241 bits (1214), Expect = 2.346e-162
Identity = 230/349 (65.90%), Postives = 277/349 (79.37%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            M F +LGL   LLRA+  +GYT+PSPIQ+QAIPAVL G+D+LAAAQTGTGKTAGF+LP+L  LS      N    R L++TPTRELAAQ+GES+ KYG+ L P   +++VFGGVKINPQ+ RL+ GVD+LVATPGRLLDL  Q  + L ++E L+LDEADRMLDMGFI DI+K++  +PKKRQ LLFSATFS++IR L  GLL+NP+ IEVAPRNT AE ++Q  Y   K +K  LL  LI+E +W QVLVFTTTKH ANRLTE+L K+   + AIHGNKSQ ART AL GFK+GEIR+LVATDVAARGIDIN LP+VVN+ELP+  EDYVHRIGRTGRAG+ G A+SL
Sbjct:    1 MPFTTLGLSDPLLRAIADAGYTTPSPIQSQAIPAVLGGHDVLAAAQTGTGKTAGFTLPILHRLSQKAYGNNRPV-RVLILTPTRELAAQIGESVNKYGAHLHPRLKSEVVFGGVKINPQMMRLRGGVDILVATPGRLLDLVNQNAVKLDQVETLILDEADRMLDMGFIRDIRKIIAFLPKKRQNLLFSATFSEDIRKLTTGLLVNPIKIEVAPRNTAAELVEQVAYLVNKANKTELLCHLIKEHDWQQVLVFTTTKHGANRLTEKLNKVDIKAAAIHGNKSQGARTSALSGFKAGEIRVLVATDVAARGIDINLLPHVVNFELPRAPEDYVHRIGRTGRAGEEGQAISL 348          
BLAST of atp-dependent rna helicase vs. nr
Match: gi|493946465|ref|WP_006890407.1| (RNA helicase [Methylobacter tundripaludum] >gi|344262165|gb|EGW22436.1| DEAD/DEAH box helicase domain protein [Methylobacter tundripaludum SV96] >gi|1346757703|gb|PPK77119.1| ATP-dependent RNA helicase RhlE [Methylobacter tundripaludum])

HSP 1 Score: 472.241 bits (1214), Expect = 2.734e-162
Identity = 230/349 (65.90%), Postives = 277/349 (79.37%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            M F +LGL   LLRA+  +GYT+PSPIQ+QAIPAVL G+D+LAAAQTGTGKTAGF+LP+L  LS      N    R L++TPTRELAAQ+GES+ KYG+ L P   +++VFGGVKINPQ+ RL+ GVD+LVATPGRLLDL  Q  + L ++E L+LDEADRMLDMGFI DI+K++  +PKKRQ LLFSATFS++IR L  GLL+NP+ IEVAPRNT AE ++Q  Y   K +K  LL  LI+E +W QVLVFTTTKH ANRLTE+L K+   + AIHGNKSQ ART AL GFK+GEIR+LVATDVAARGIDIN LP+VVN+ELP+  EDYVHRIGRTGRAG+ G A+SL
Sbjct:    1 MPFTTLGLSDPLLRAIADAGYTTPSPIQSQAIPAVLGGHDVLAAAQTGTGKTAGFTLPILHRLSQKAYGNNRPV-RVLILTPTRELAAQIGESVNKYGAHLHPRLKSEVVFGGVKINPQMMRLRGGVDILVATPGRLLDLVNQNAVKLDQVETLILDEADRMLDMGFIRDIRKIIAFLPKKRQNLLFSATFSEDIRKLTTGLLVNPIKIEVAPRNTAAELVEQVAYLVNKANKTELLCHLIKEHDWQQVLVFTTTKHGANRLTEKLNKVDIKAAAIHGNKSQGARTSALSGFKAGEIRVLVATDVAARGIDINLLPHVVNFELPRAPEDYVHRIGRTGRAGEEGQAISL 348          
BLAST of atp-dependent rna helicase vs. nr
Match: gi|647287549|ref|WP_025732497.1| (hypothetical protein [Carnimonas nigrificans])

HSP 1 Score: 473.396 bits (1217), Expect = 5.568e-162
Identity = 238/349 (68.19%), Postives = 279/349 (79.94%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSL 349
            MSF SLGL PAL RAV+ +GYT+PSPIQA+AIP  L G D+LAAAQTGTGKTAGF+LP+LQ L+ + +R+   +PRAL++TPTRELAAQ+ ESL  Y   LSP   + +VFGGVKINPQI RL+RGVDVLVA PGRLLDL  Q  +SL  IE LVLDEADRMLDMGF+HDIK++LKL+P KRQ LLFSATFS EIRTL E +L NPVSI+VAPRN+ AE ++Q VY  +K  K  LL  LI++    QVLVFT TKH ANR+T+RL + G ++ AIHGNKSQNART+AL GFKSG I +LVATDVAARGIDI QLP V+N+ELPK + DYVHRIGRTGRAG  G AVSL
Sbjct:    1 MSFASLGLLPALKRAVDDAGYTTPSPIQAKAIPVALEGRDVLAAAQTGTGKTAGFALPILQRLALTPERQ-GKSPRALILTPTRELAAQIHESLVAYSEHLSPRLRSDVVFGGVKINPQIERLQRGVDVLVACPGRLLDLVSQKAVSLNHIETLVLDEADRMLDMGFVHDIKRILKLLPAKRQNLLFSATFSAEIRTLTESILHNPVSIDVAPRNSAAETVEQAVYKIDKPLKSALLIHLIKQQSLTQVLVFTATKHMANRVTQRLERAGISAAAIHGNKSQNARTQALAGFKSGTINVLVATDVAARGIDIAQLPNVINFELPKAAPDYVHRIGRTGRAGAEGKAVSL 348          
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1191468117|gb|OTE97297.1| (ATP-dependent RNA helicase RhlE [Crenothrix sp. D3])

HSP 1 Score: 469.544 bits (1207), Expect = 3.086e-161
Identity = 235/358 (65.64%), Postives = 278/358 (77.65%), Query Frame = 0
Query:    1 MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTGKTAGFSLPLLQILSTSGKRKNATTP-RALVVTPTRELAAQVGESLQKYGSELSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAEIEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAEGLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVLVFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRILVATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSLPDGNRVAA 357
            M F  LGL   LLRA+  +GYT+PSPIQ QAIPAVL G+D+LAAAQTGTGKTAGF+LP+L  LS   K  ++  P R L++TPTRELAAQVGES+ KYG  L P   T++VFGGVKINPQ+ RL+ GVDVLVATPGRLLDL  Q  + L ++E LVLDEADRMLDMGFI DI+K++  +PKKRQ LLFSATFS++IR L  GLL+NP+ IEVA RNT AE ++Q  Y   K +K  LL  LI+  +W QVLVFT+TKH ANRLT++L K+   + AIHGNKSQ ART AL GFK+GEIR+LVATDVAARGIDIN LP+VVNYELP+   DYVHRIGRTGRAG+ G AVSL   + VAA
Sbjct:    1 MPFTKLGLSDPLLRAIAEAGYTTPSPIQLQAIPAVLNGHDLLAAAQTGTGKTAGFALPILHRLSQ--KHYSSNRPIRVLILTPTRELAAQVGESVSKYGEHLHPRLKTEVVFGGVKINPQMMRLRGGVDVLVATPGRLLDLVNQNAVKLDQVETLVLDEADRMLDMGFIRDIRKIIAFLPKKRQNLLFSATFSEDIRQLTTGLLVNPIKIEVAARNTAAETVEQIAYLCNKANKAELLCHLIKTNDWQQVLVFTSTKHGANRLTDKLNKLDIKAAAIHGNKSQGARTSALSGFKAGEIRVLVATDVAARGIDINLLPHVVNYELPRAPADYVHRIGRTGRAGEEGQAVSLVSHDEVAA 356          
The following BLAST results are available for this feature:
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000049181.357e-8743.91supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989... [more]
EMLSAG000000051102.624e-8642.04supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1... [more]
EMLSAG000000025812.700e-8139.39supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803... [more]
EMLSAG000000113907.825e-8138.66supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1... [more]
EMLSAG000000111891.318e-7940.05supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1... [more]
EMLSAG000000101432.225e-7939.88supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1... [more]
EMLSAG000000080486.411e-7939.62supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1... [more]
EMLSAG000000008461.324e-7438.75supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:... [more]
EMLSAG000000018051.797e-7439.77supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1... [more]
EMLSAG000000003951.650e-7240.00supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:... [more]

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BLAST of atp-dependent rna helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|548730|sp|P25888.3|RHLE_ECOLI3.005e-15363.71RecName: Full=ATP-dependent RNA helicase RhlE[more]
gi|677995702|sp|B9XXL6.1|RHPA_HELP86.597e-9644.25RecName: Full=DEAD-box ATP-dependent RNA helicase ... [more]
gi|81815103|sp|O25029.1|RHPA_HELPY7.671e-9644.25RecName: Full=DEAD-box ATP-dependent RNA helicase ... [more]
gi|32363412|sp|Q9HXE5.1|RHLB_PSEAE1.783e-9541.85RecName: Full=ATP-dependent RNA helicase RhlB >gi|... [more]
gi|32363284|sp|Q887N8.1|RHLB_PSESM1.615e-9241.69RecName: Full=ATP-dependent RNA helicase RhlB[more]
gi|74659403|sp|Q6BU54.1|DED1_DEBHA2.503e-9245.11RecName: Full=ATP-dependent RNA helicase DED1[more]
gi|32363346|sp|Q8PFZ3.1|RHLB_XANAC6.214e-9240.53RecName: Full=ATP-dependent RNA helicase RhlB[more]
gi|32363291|sp|Q88NB7.1|RHLB_PSEPK1.412e-9141.69RecName: Full=ATP-dependent RNA helicase RhlB[more]
gi|223590230|sp|A5DQS0.3|DED1_PICGU8.162e-9144.51RecName: Full=ATP-dependent RNA helicase DED1[more]
gi|122300890|sp|Q088J2.1|RHLB_SHEFN8.245e-9139.47RecName: Full=ATP-dependent RNA helicase RhlB[more]

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BLAST of atp-dependent rna helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1198235011|ref|WP_086900249.1|1.410e-16366.76ATP-dependent RNA helicase RhlE [Kushneria marisfl... [more]
gi|1343579608|gb|PPD49857.1|1.708e-16366.02ATP-dependent RNA helicase RhlE [Methylobacter sp.... [more]
gi|1348907824|ref|WP_104423713.1|1.946e-16366.19ATP-dependent RNA helicase RhlE [Methylobacter tun... [more]
gi|1093981390|ref|WP_070979946.1|2.264e-16360.05ATP-dependent RNA helicase RhlE [Kushneria sp. YCW... [more]
gi|1197586166|ref|WP_086621375.1|5.707e-16366.95ATP-dependent RNA helicase RhlE [Kushneria konosir... [more]
gi|1222075770|ref|WP_090132494.1|2.043e-16266.85ATP-dependent RNA helicase RhlE [Kushneria avicenn... [more]
gi|652888017|ref|WP_027148013.1|2.346e-16265.90ATP-dependent RNA helicase RhlE [Methylobacter tun... [more]
gi|493946465|ref|WP_006890407.1|2.734e-16265.90RNA helicase [Methylobacter tundripaludum] >gi|344... [more]
gi|647287549|ref|WP_025732497.1|5.568e-16268.19hypothetical protein [Carnimonas nigrificans][more]
gi|1191468117|gb|OTE97297.1|3.086e-16165.64ATP-dependent RNA helicase RhlE [Crenothrix sp. D3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1_size3401120supercontigscaffold1_size3401120:989238..990893 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1_size3401120:989238..990893-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1_size3401120-processed-gene-10.1 ID=snap_masked-scaffold1_size3401120-processed-gene-10.1|Name=atp-dependent rna helicase|organism=Tigriopus kingsejongensis|type=gene|length=1656bp|location=Sequence derived from alignment at scaffold1_size3401120:989238..990893- (Tigriopus kingsejongensis)
ATGTCATTTGATTCTCTGGGCCTCGACCCAGCTTTGCTCCGTGCTGTTGA GAGCTCGGGCTACACTTCGCCTTCGCCCATACAGGCGCAAGCCATACCGG CGGTGCTCGCCGGAAACGACATCCTCGCTGCCGCACAGACTGGCACTGGG AAAACTGCTGGATTCAGCCTGCCCTTACTGCAGATACTGTCCACCAGCGG TAAACGCAAAAATGCGACTACTCCACGAGCACTGGTAGTCACCCCCACAC GCGAGCTAGCCGCACAAGTGGGCGAGTCTCTGCAGAAGTACGGCAGCGAA CTCAGCCCAGCCCAGACAACTCAAATTGTCTTCGGTGGCGTCAAGATCAA CCCACAGATTGCCCGCCTCAAACGCGGCGTGGATGTCCTGGTTGCCACAC CGGGTCGCCTTCTGGACTTGCAGCAACAGGGCGTGATCTCTTTAGCTGAG ATCGAGATACTGGTTCTGGATGAAGCGGATCGCATGCTGGACATGGGTTT TATCCATGACATCAAGAAGCTGCTCAAGCTAATGCCTAAAAAGCGCCAGA CTTTGCTGTTCTCTGCGACCTTCTCAAAAGAAATTCGCACACTAGCTGAG GGGCTGTTGATCAACCCCGTATCTATCGAAGTCGCGCCGCGTAACACCAC GGCTGAGCGTATCGATCAGAAAGTCTACTTCGCCGAAAAGCACGACAAAA TTCGCCTGTTAGGCGGGTTAATCGAGGAAGGTGAATGGAACCAGGTGCTG GTCTTCACCACCACCAAACATTTTGCCAATCGCCTCACTGAGCGCCTGTG CAAGATGGGCTTCAACAGCATGGCGATTCACGGCAACAAGAGCCAAAACG CACGCACGAAAGCGCTGGAAGGCTTCAAGAGCGGTGAGATTCGCATACTG GTTGCAACCGATGTCGCTGCGCGCGGTATCGACATCAACCAACTGCCTTA CGTAGTCAACTACGAACTGCCGAAAGTCTCAGAAGACTATGTGCACCGTA TTGGTCGTACCGGACGTGCCGGCAAAGCGGGCTTAGCCGTATCACTGGTG AGTCGCGAAGAGCAAAATCTGCTGCGCTCAGTACAACGCGTCATCAAAAC TGAAATCCCTGTCGGCACGTTGGATGGCTTTGAGCCTAGCGATGCGCCAC CCAAGTCAGAGCAAGCTGAGCGCCCTCGCGGGCAACGCAATGCACAAGGC AGCGGCCGAGGCAGAAATGCCAACGCGAGTGGTCGAAGCAACAGCAGCAG TGGAAGCAGCAACAGCAATAGCCGTGGCAAATCCAACAGCTCTGGCCGCT CTGCACAGACCGCTGAGAAGAGCGCTTCAGCCGAAGGTTCGTCGTCTAAT CGTCGCAACAACGGCCCAAAACCAGCCCGCAAACCTCGGCCGGCCAATAG CGAAGCCAAACCGCGTAGCGCCCCTCGCCCCACTAACCCTAACTCCGCTG AGCCCGACGGCAATCGCGTCGCCGCCAAGCCAGATGTAGATGGCAACAGC GTGAACTACACAGCTGATGTGGGTAATCGCCCCGCTTACGAGCCTACCGG TAACGAGCGACGCCCGCAGCGTCCTCGTCGCCCTGGCCAAGGCGGACAAG GCGGTGGCCAGCGTGGCCCAGGTGGTCAGGGCAGGAATCGTAACCGCTCT GCCTAA
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Synonyms
The feature 'atp-dependent rna helicase' has the following synonyms
Synonym
Tk04876
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