cytochrome b subunit of cytochrome bc1, snap_masked-scaffold2845_size11892-processed-gene-0.1 (gene) Tigriopus kingsejongensis

Overview


Name	cytochrome b subunit of cytochrome bc1
Unique Name	snap_masked-scaffold2845_size11892-processed-gene-0.1
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|298286798|sp|O31215.2|CYB_ALLVD (RecName: Full=Cytochrome b)

HSP 1 Score: 479.559 bits (1233), Expect = 9.165e-164
Identity = 227/332 (68.37%), Postives = 273/332 (82.23%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKK----NKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            ++WID RFPLSET+  H+S+Y+APKN NFW +FG L+ + L+IQ+VTG++L M+YKPD   AF SVEYIMRDVD+GWLIRYMHSTGAS FFIV+YLHMFRGL++GSY+KPREL+W+ G+ IY+ +MA AF GYLLPWGQMSYWGAQVI++LF  +P +G  L+ WVRGDF++SD TLNRFFAFH + +P +L  LVFLHIVALHHVGSNNPDG+EIK+    N+ +D  P DGIPFHPYYTVKD  G  VFL +F  V+FF P MGG FLE  NF PA+P++TP HIAPVWYFTPFYAMLRA P M GS FPGVVVM AAI++LF LPW+DR
Sbjct:    9 LSWIDKRFPLSETWRNHLSEYYAPKNLNFWSFFGSLAILTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFIVIYLHMFRGLLWGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGAQVIVNLFAAVPVVGEDLSVWVRGDFVISDATLNRFFAFHFL-LPFLLAGLVFLHIVALHHVGSNNPDGIEIKEGPKGNRWSDKAPADGIPFHPYYTVKDLMGVVVFLAIFGYVMFFNPTMGGLFLEAPNFQPANPMQTPAHIAPVWYFTPFYAMLRAVPPMYGSQFPGVVVMFAAILILFVLPWLDR 339

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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|6014852|sp|O54070.1|CYB_RICPR (RecName: Full=Cytochrome b)

HSP 1 Score: 338.576 bits (867), Expect = 3.959e-109
Identity = 175/335 (52.24%), Postives = 226/335 (67.46%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRGTAAGG 334
            + WID R P+  ++  H S Y  PKN N+ +  G ++ + L+IQ++TG+ L M+Y P    AF SVE IMR+V+YGWL+RY H+ GAS FF  +YLH+ RGL YGSY+ PREL+W  G+ I++ +MA AFMGY+LPWGQMSYWGA VI +LF+ IP +G  +  W+ G F V + TLNRFFA H +  P I+V LV LH+VALH  GSNNP G+++K  K       D IPFHPYYTVKD  G GV+ I+F   +F+AP     +L H  N+IPA+PL TP HI P WYF PFYA+LRA PS +G    GV +M  +IVVLF LPW+D      G
Sbjct:   14 IEWIDYRLPIF-SFLKHFSYYQTPKNLNYLWNLGSIAGIALVIQIITGVILAMHYTPHVDHAFESVERIMRNVNYGWLLRYTHAVGASMFFAAIYLHIARGLYYGSYKTPRELLWHIGIIIFLIMMATAFMGYVLPWGQMSYWGATVITNLFSAIPLVGEPIVIWLWGGFSVDNPTLNRFFALHYL-FPFIIVVLVILHLVALHQHGSNNPKGIDVKSTK-------DTIPFHPYYTVKDFVGFGVYFIIFAYFIFYAPN----YLGHPDNYIPANPLVTPAHIVPEWYFLPFYAILRAVPSKLG----GVFLMFGSIVVLFLLPWLDTSKIRSG 331

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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|123266200|sp|Q1RIA4.1|CYB_RICBR (RecName: Full=Cytochrome b)

HSP 1 Score: 337.035 bits (863), Expect = 1.720e-108
Identity = 173/328 (52.74%), Postives = 227/328 (69.21%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327
            + WID R P+  ++  H S Y  PKN ++ +  G ++ + L+IQ++TG+ L M+Y P    AF SVE IMR+V+YGWL+RY H+ GAS FF  VYLH+ RGL YGSY+ PREL+W  G+ I++ +MA AFMGY+LPWGQMSYWGA VI +LF+ IP IG ++  W+ G F V + TLNRFF+ H + +P I+VALV LH+VALH  GSNNP G+++K        P D IPFHPYYTVKD  G GV+ I+F   +F+ P     +L H  N+IPA+PL TP HI P WYF PFYA+LRA PS +G    GV++M  +I VLF LPW+D
Sbjct:   16 IEWIDYRLPVF-SFLKHFSHYQTPKNLSYLWNLGSIAGIALVIQIITGVILAMHYTPHVDHAFDSVEKIMRNVNYGWLLRYTHAVGASMFFAAVYLHIARGLYYGSYKAPRELLWHIGIIIFLTMMATAFMGYVLPWGQMSYWGATVITNLFSAIPLIGKSIVTWLWGGFSVDNPTLNRFFSLHYL-LPFIIVALVMLHLVALHQHGSNNPKGIDVKS-------PKDTIPFHPYYTVKDFVGFGVYFIIFAYFIFYEPN----YLGHPDNYIPANPLVTPAHIVPEWYFLPFYAILRAVPSKLG----GVLLMFGSIFVLFLLPWLD 326

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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|81854122|sp|Q92IR1.1|CYB_RICCN (RecName: Full=Cytochrome b)

HSP 1 Score: 337.035 bits (863), Expect = 1.720e-108
Identity = 174/328 (53.05%), Postives = 225/328 (68.60%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327
            + WID R P+    + H S Y  PKN N+ +  G ++ + L+IQ++TG+ L M+Y P    AF SVE IMR+V+YGWL+RY H+ GAS FF  VYLH+ RGL YGSY+ PREL+W  G+ I++ +MA AFMGY+LPWGQMSYWGA VI +LF+ IP IG  +  W+ G F V + TLNRFF+ H + +P I+VALV LH+VALH  GSNNP G+++K        P D IPFHPYYTVKD  G GV+ I+F   +F+ P     +L H  N+IPA+PL TP HI P WYF PFYA+LRA PS +G    GV++M  +I VLF LPW+D
Sbjct:   14 IEWIDYRLPIFAFLK-HFSHYQTPKNLNYLWNLGSIAGIALVIQIITGVILAMHYTPHVDHAFDSVERIMRNVNYGWLLRYTHAVGASMFFAAVYLHIARGLYYGSYKAPRELLWHIGIIIFLTMMATAFMGYVLPWGQMSYWGATVITNLFSAIPLIGEFIVTWLWGGFSVDNPTLNRFFSLHYL-LPFIIVALVMLHLVALHQHGSNNPKGIDVKS-------PKDTIPFHPYYTVKDFVGFGVYFIIFAYFIFYEPN----YLGHPDNYIPANPLVTPAHIVPEWYFLPFYAILRAMPSKLG----GVLLMFGSIFVLFLLPWLD 324

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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|75535806|sp|Q4UJM4.1|CYB_RICFE (RecName: Full=Cytochrome b)

HSP 1 Score: 336.265 bits (861), Expect = 3.307e-108
Identity = 172/328 (52.44%), Postives = 227/328 (69.21%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327
            + WID R P+  ++  H S Y  PKN ++ +  G ++ + L+IQ++TG+ L M+Y P    AF SVE IMR+V+YGWL+RY H+ GAS FF  VYLH+ RGL YGSY+ PREL+W  G+ I++ +MA AFMGY+LPWGQMSYWGA VI +LF+ IP IG ++  W+ G F V + TLNRFF+ H + +P I+VALV LH+VALH  GSNNP G+++K        P D IPFHPYYTVKD  G GV+ I+F   +F+ P     +L H  N++PA+PL TP HI P WYF PFYA+LRA PS +G    GV++M  +I VLF LPW+D
Sbjct:   14 IEWIDYRLPIF-SFLKHFSHYQTPKNLSYLWNLGSIAGIALVIQIITGVILAMHYTPHVDHAFDSVERIMRNVNYGWLLRYTHAVGASMFFAAVYLHIARGLYYGSYKAPRELLWHIGIIIFLTMMATAFMGYVLPWGQMSYWGATVITNLFSAIPLIGESIVTWLWGGFSVDNPTLNRFFSLHYL-LPFIIVALVMLHLVALHQHGSNNPKGIDVKS-------PKDTIPFHPYYTVKDFVGFGVYFIIFAYFIFYEPN----YLGHPDNYVPANPLVTPAHIVPEWYFLPFYAILRAVPSKLG----GVLLMFGSIFVLFLLPWLD 324

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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|81826324|sp|Q68X99.1|CYB_RICTY (RecName: Full=Cytochrome b)

HSP 1 Score: 333.183 bits (853), Expect = 6.166e-107
Identity = 171/336 (50.89%), Postives = 223/336 (66.37%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRGTAAGGG 335
            + WID R P+   ++ H S Y  PKN N+ +  G ++ + L+IQ++TG+ L M+Y P    AF SVE IMR+V+YGWL+RY H+ GAS FF  +YLH+ RGL YGSY+ PREL+W  G+ I++ +MA AFMGY+LPWGQMSYW A VI +LF+ IP IG  +  W+ G F V + TLNRFF+ H +  P I+VALV LH++ALH  GSNNP G+++K  K       D IPFHPYYTVKD  G GV+ I+F   +F+ P     +L H  N+IPA+PL TP HI P WYF PFYA+LRA PS +     GV +M  +I VLF LPW+D      G 
Sbjct:   14 IEWIDYRLPIFSFFK-HFSYYQTPKNLNYLWTLGSIAGIALVIQIITGVILAMHYTPHVDHAFESVERIMRNVNYGWLLRYTHTVGASMFFATIYLHIARGLYYGSYKTPRELLWHIGIIIFLIMMATAFMGYVLPWGQMSYWSATVITNLFSAIPLIGEPIVIWLCGGFSVDNPTLNRFFSLHYL-FPFIIVALVILHLLALHQHGSNNPKGIDVKSTK-------DTIPFHPYYTVKDFVGFGVYFIIFAYFIFYEPN----YLGHPDNYIPANPLVTPAHIVPEWYFRPFYAILRAVPSKLA----GVFLMFGSIFVLFLLPWLDTSKIRSGN 332

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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|117886|sp|P23134.1|CYB_RHORU (RecName: Full=Cytochrome b)

HSP 1 Score: 323.168 bits (827), Expect = 4.487e-103
Identity = 174/327 (53.21%), Postives = 224/327 (68.50%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327
            + W D+R P+       +  Y AP+N N+++ FG L+ + +II + TGIFL M+Y      AF SVE IMRDV+YGWL+RYMH+ GAS FFIVVY+HMFRGL YGSY+ PRE++W  G+ I + +MA AFMGY+LPWGQMS+WGA VI +LF+ IP +G  +   + G F V + TLNRFF+ H +  P++L A+VFLH+ ALH   SNNP G++ K        P D IPFHPYYTVKD FG G+FL+VF   VFFAP   G   E  N+IPA+P+ TP HI P WYF PFYA+LRA P  +G    GV+ M  AI++LF LPW+D
Sbjct:   12 LKWFDERLPVLTVAHKELVVYPAPRNLNYFWNFGSLAGIAMIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMFFIVVYVHMFRGLYYGSYKPPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVVGDDIVTLLWGGFSVDNPTLNRFFSLHYL-FPMLLFAVVFLHMWALHVKKSNNPLGIDAKG-------PFDTIPFHPYYTVKDAFGLGIFLMVFCFFVFFAPNFFG---EPDNYIPANPMVTPTHIVPEWYFLPFYAILRAVPDKLG----GVLAMFGAILILFVLPWLD 323

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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|6014851|sp|P81378.1|CYB_BLAVI (RecName: Full=Cytochrome b)

HSP 1 Score: 308.916 bits (790), Expect = 2.656e-97
Identity = 158/326 (48.47%), Postives = 208/326 (63.80%), Query Frame = 0

Query:    3 WIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327
            W+D R P+          +  PKN N+ Y FG +  V LIIQ+V+G+ L M+Y      AF S+E+IMRDV+YGWLIRY+H  GASFFF  VY H FRG+ YGSY++PRE++W+ G+ I + +MA AFMGY+LPWGQMS+WGA VI +LF+ IP+IG  +  W+ G + V + TL RF++ H + +P ++V +V LH+ ALH  G  NP GVE+K  K       D + F P+   KD    GV  I F   VFF P     +L HA N+IPA+P  TP HI P WY  PFYA+LRA P  +G    GV+ M  A+VVL FLPW+D
Sbjct:   16 WLDTRLPIVRMMYDQFVAFPVPKNINYAYAFGAILAVFLIIQIVSGVVLAMHYVAQDTLAFASIEHIMRDVNYGWLIRYIHMNGASFFFFAVYAHTFRGMYYGSYKEPREVLWILGVIIIILMMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGDPIVTWLWGGYSVGNPTLTRFYSLHYL-LPFVIVGVVMLHVWALHVTGQTNPTGVEVKSEK-------DTVRFTPFALTKDAVALGVCFIAFAWFVFFVPN----YLGHADNYIPANPGVTPAHIVPEWYLLPFYAILRAVPDKLG----GVIAMFGALVVLLFLPWLD 325

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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|338818076|sp|D5ANZ3.1|CYB_RHOCB (RecName: Full=Cytochrome b)

HSP 1 Score: 307.375 bits (786), Expect = 1.549e-96
Identity = 161/349 (46.13%), Postives = 219/349 (62.75%), Query Frame = 0

Query:    3 WIDDRFPL-SETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRA--------------TPSMMGSAFPGVVVMGAAIVVLFFLPWIDRGTAAGGG 335
            W+ DR P+    Y+  M     PKN N+W+ +G++    L++Q+VTGI L M+Y P    AF SVE+IMRDV+ GW +RY+H+ GAS FF+ VY+H+FRGL YGSY+ PRE+ W+ GM IY+ +M  AFMGY+LPWGQMS+WGA VI  LF  IP IGP++  W+ G   V + TLNRFF+ H + +P ++ ALV +HI A H  G+NNP GVE+++   AD    D +PF PY+ +KD F   + L+ FFAVV + P     +L H  N++ A+PL TP HI P WYF PFYA+LRA              T  ++ + F GV+ M  AI V+   PW+D      G 
Sbjct:   18 WLHDRLPIVGLVYDTIMIP--TPKNLNWWWIWGIVLAFTLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRDVNGGWAMRYIHANGASLFFLAVYIHIFRGLYYGSYKAPREITWIVGMVIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGIGPSIQAWLLGGPAVDNATLNRFFSLHYL-LPFVIAALVAIHIWAFHTTGNNNPTGVEVRRTSKADA-EKDTLPFWPYFVIKDLFALALVLLGFFAVVAYMPN----YLGHPDNYVQANPLSTPAHIVPEWYFLPFYAILRAFAADVWVVILVDGLTFGIVDAKFFGVIAMFGAIAVMALAPWLDTSKVRSGA 358

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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|338817833|sp|P0CY47.1|CYB_RHOCA (RecName: Full=Cytochrome b)

HSP 1 Score: 306.605 bits (784), Expect = 2.873e-96
Identity = 161/349 (46.13%), Postives = 219/349 (62.75%), Query Frame = 0

Query:    3 WIDDRFPL-SETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRA--------------TPSMMGSAFPGVVVMGAAIVVLFFLPWIDRGTAAGGG 335
            W+ DR P+    Y+  M     PKN N+W+ +G++    L++Q+VTGI L ++Y P    AF SVE+IMRDV+ GW +RY+H+ GAS FF+ VY+H+FRGL YGSY+ PRE+ W+ GM IY+ +M  AFMGY+LPWGQMS+WGA VI  LF  IP IGP++  W+ G   V + TLNRFF+ H + +P ++ ALV +HI A H  G+NNP GVE+++   AD    D +PF PY+ +KD F   + L+ FFAVV + P     +L H  N+I A+PL TP HI P WYF PFYA+LRA              T  ++ + F GV+ M  AI V+   PW+D      G 
Sbjct:   18 WLHDRLPIVGLVYDTIMIP--TPKNLNWWWIWGIVLAFTLVLQIVTGIVLAIDYTPHVDLAFASVEHIMRDVNGGWAMRYIHANGASLFFLAVYIHIFRGLYYGSYKAPREITWIVGMVIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGIGPSIQAWLLGGPAVDNATLNRFFSLHYL-LPFVIAALVAIHIWAFHTTGNNNPTGVEVRRTSKADA-EKDTLPFWPYFVIKDLFALALVLLGFFAVVAYMPN----YLGHPDNYIQANPLSTPAHIVPEWYFLPFYAILRAFAADVWVVILVDGLTFGIVDAKFFGVIAMFGAIAVMALAPWLDTSKVRSGA 358

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BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1088648239|gb|OHE61240.1| (cytochrome B [Thiobacillus sp. GWE1_62_9])

HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0
Identity = 252/328 (76.83%), Postives = 296/328 (90.24%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            M WIDDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L+IQ+VTGIFLTMNYKPD   AFTSVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMS+WGAQVI++LF  +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDGVEIKK K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A++FFAPEMGGYFLE ANF+PADPLKTPEHIAP+WYFTPFYA+LRA P + GS FPGVV MG +IV LFFLPW+DR
Sbjct:    8 MGWIDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLTMNYKPDAELAFTSVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSFWGAQVIVNLFAAVPFIGEDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGVEIKKKKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAILFFAPEMGGYFLEAANFVPADPLKTPEHIAPLWYFTPFYAILRAVPPLFGSQFPGVVAMGLSIVFLFFLPWLDR 335

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BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1113392310|gb|OJW55283.1| (cytochrome b [Thiobacillus sp. 65-1059] >gi|1113430457|gb|OJW92529.1| cytochrome b [Thiobacillus sp. 65-1402])

HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0
Identity = 252/328 (76.83%), Postives = 295/328 (89.94%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            M W+DDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L+IQ+VTGIFLTMNYKPD   AFTSVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMSYWGAQVI++LF  +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDGVEIKK+K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFFAPEMGGYFLE  NF+PAD LKTP HIAP+WYFTPFYA+LRA P M GS FPGVV MG +IVVLFFLPW+DR
Sbjct:    8 MGWVDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLTMNYKPDAELAFTSVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSYWGAQVIVNLFAAVPFIGEDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGVEIKKHKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAIVFFAPEMGGYFLEANNFVPADSLKTPAHIAPLWYFTPFYAILRAVPPMFGSQFPGVVAMGLSIVVLFFLPWLDR 335

[Close]

BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|499631610|ref|WP_011312344.1| (cytochrome b [Thiobacillus denitrificans] >gi|74057345|gb|AAZ97785.1| cytochrome B subunit of cytochrome bc1 [Thiobacillus denitrificans ATCC 25259])

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 249/328 (75.91%), Postives = 295/328 (89.94%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            M WIDDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L++Q+VTGIFLTMNYKPD   AF SVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMS+WGAQVI++LF  +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDG+EIKK K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFFAPEMGGYFLE  NF+PADPLKTPEHIAP+WYFTPFYA+LRA P + GS FPGVV MG +IV+LFFLPW+DR
Sbjct:    8 MGWIDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVLQIVTGIFLTMNYKPDAELAFASVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSFWGAQVIVNLFAAVPFIGEDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAIVFFAPEMGGYFLEANNFVPADPLKTPEHIAPLWYFTPFYAILRAVPPLFGSQFPGVVAMGMSIVLLFFLPWLDR 335

[Close]

BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1064204594|gb|ODV00410.1| (cytochrome B [Thiobacillus sp. SCN 63-57])

HSP 1 Score: 541.191 bits (1393), Expect = 0.000e+0
Identity = 248/329 (75.38%), Postives = 294/329 (89.36%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRG 329
            M W+DDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L++Q+VTGIFLTMNYKPD   AF SVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMSYWGAQVI++LF+ +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDG+EIKK K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFF P MGGYFLE  NFIPADPLKTP HIAP+WYFTPFYA+LRA P M GS FPGVV MG +IV++FFLPW+DRG
Sbjct:    8 MGWVDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVMQIVTGIFLTMNYKPDSGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSYWGAQVIVNLFSAVPFIGNDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAIVFFGPTMGGYFLESNNFIPADPLKTPPHIAPLWYFTPFYAILRAVPPMFGSQFPGVVAMGMSIVLIFFLPWLDRG 336

[Close]

BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1113601228|gb|OJY60382.1| (cytochrome b [Thiobacillus sp. 0-1251])

HSP 1 Score: 540.806 bits (1392), Expect = 0.000e+0
Identity = 248/329 (75.38%), Postives = 294/329 (89.36%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRG 329
            M W+DDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L++Q+VTGIFLTMNYKPD   AF SVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMSYWGAQVI++LF+ +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDG+EIKK K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFF P MGGYFLE  NFIPADPLKTP HIAP+WYFTPFYA+LRA P M GS FPGVV MG +IV++FFLPW+DRG
Sbjct:    8 MGWVDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVMQIVTGIFLTMNYKPDSGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSYWGAQVIVNLFSAVPFIGNDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAIVFFGPTMGGYFLESNNFIPADPLKTPPHIAPLWYFTPFYAILRAVPPMFGSQFPGVVAMGMSIVLIFFLPWLDRG 336

[Close]

BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1273663933|gb|PID63297.1| (cytochrome b [Gammaproteobacteria bacterium])

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 257/327 (78.59%), Postives = 291/327 (88.99%), Query Frame = 0

Query:    3 WIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPW-IGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            WID RFP+++T E H+++Y+APKNFNFWYYFG L+ ++L IQ+VTGIFLTMNYKPDG  AF SVEYIMRDV++GWLIRYMHSTGAS FF+VVYLHMFR L+YGSY+KPREL+W+FGMFIYVALMAEAFMGYLLPWGQMSYWGAQVI+SLF  IP+ IG ALT W++GD+I+SD TLNRFFA HVIAVPL+L+ LV  H++ALH VGSNNPDG+EIK NKNADGIP DGIPFHPYYTVKD  GT VFL VFFA+VFF PEMGGYFLEHANF+PADPLKTPEHIAPVWYFTPFYA+LRA PS +G    GV+ MGAAIVVLFFLPWIDR
Sbjct:   18 WIDQRFPMTKTLEEHITKYYAPKNFNFWYYFGSLAMLVLAIQIVTGIFLTMNYKPDGDLAFKSVEYIMRDVNWGWLIRYMHSTGASMFFLVVYLHMFRALLYGSYKKPRELLWIFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPFGIGDALTLWLKGDYIISDATLNRFFALHVIAVPLVLIFLVVAHVLALHEVGSNNPDGIEIKANKNADGIPRDGIPFHPYYTVKDIMGTIVFLFVFFAIVFFMPEMGGYFLEHANFVPADPLKTPEHIAPVWYFTPFYAILRAIPSKLG----GVMFMGAAIVVLFFLPWIDR 340

[Close]

BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1214910738|ref|WP_088920744.1| (cytochrome bc complex cytochrome b subunit [Granulosicoccus antarcticus] >gi|1214627310|gb|ASJ75904.1| Cytochrome b [Granulosicoccus antarcticus IMCC3135])

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 256/327 (78.29%), Postives = 291/327 (88.99%), Query Frame = 0

Query:    3 WIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPW-IGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            WID+RFPL++  E H+++Y+APKNFNFWYYFG L+ ++L+IQLVTGIFLTMNYKPDG  AF+SVEYIMRDV++GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPREL+WVFGM IYVALMAEAFMGYLLPWGQMSYWGAQVI+SLF  IP+ IG ALT W++GD+IVSD TLNRFFA HVIAVPL+LV LV  HI+ALH VGSNNPDG++IKKNKNA+G+P DGIPFHPYYTVKD  GT VFLIVFFA+VFFAPEMGGYFLEHANF+PAD  KTPEHIAPVWYFTPFYA+LRA P  +G    GV+ MG AIVVLF +PW+DR
Sbjct:   16 WIDERFPLTKMLEEHITKYYAPKNFNFWYYFGSLAMLVLVIQLVTGIFLTMNYKPDGNLAFSSVEYIMRDVNFGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYKKPRELLWVFGMLIYVALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPFGIGDALTIWLKGDYIVSDATLNRFFALHVIAVPLVLVFLVIAHIMALHEVGSNNPDGIDIKKNKNAEGVPKDGIPFHPYYTVKDLMGTVVFLIVFFAIVFFAPEMGGYFLEHANFVPADQFKTPEHIAPVWYFTPFYAILRAVPDKLG----GVIAMGGAIVVLFLVPWLDR 338

[Close]

BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|517330955|ref|WP_018506447.1| (cytochrome b [Thiobacillus thioparus])

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 248/329 (75.38%), Postives = 293/329 (89.06%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRG 329
            M W+DDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L++Q+VTGIFLTMNYKPD   AF SVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMSYWGAQVI++LF  +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDG+EIKK K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFF P MGGYFLE  NFIPADPLKTP HIAP+WYFTPFYA+LRA P M GS FPGVV MG +IV++FFLPW+DRG
Sbjct:    8 MGWVDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVMQIVTGIFLTMNYKPDSMLAFASVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSYWGAQVIVNLFAAVPFIGDDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAIVFFGPTMGGYFLEANNFIPADPLKTPPHIAPLWYFTPFYAILRAVPPMFGSQFPGVVAMGMSIVLIFFLPWLDRG 336

[Close]

BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1273742632|gb|PIE35483.1| (cytochrome b [Gammaproteobacteria bacterium])

HSP 1 Score: 536.954 bits (1382), Expect = 0.000e+0
Identity = 256/327 (78.29%), Postives = 290/327 (88.69%), Query Frame = 0

Query:    3 WIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPW-IGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            WID RFP+++T E H+++Y+APKNFNFWYYFG L+ ++L IQ+VTGI LTMNYKPDG  AF SVEYIMRDV++GWLIRYMHSTGAS FF+VVYLHMFR L+YGSY+KPREL+W+FGMFIYVALMAEAFMGYLLPWGQMSYWGAQVI+SLF  IP+ IG ALT W++GD+I+SD TLNRFFA HVIAVPL+L+ LV  H++ALH VGSNNPDG+EIK NKNADGIP DGIPFHPYYTVKD  GT VFL VFFA+VFF PEMGGYFLEHANF+PADPLKTPEHIAPVWYFTPFYA+LRA PS +G    GV+ MGAAIVVLFFLPWIDR
Sbjct:   18 WIDQRFPMTKTLEEHITKYYAPKNFNFWYYFGSLAMLVLAIQIVTGIILTMNYKPDGDLAFKSVEYIMRDVNWGWLIRYMHSTGASMFFLVVYLHMFRALLYGSYKKPRELLWIFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPFGIGDALTLWLKGDYIISDATLNRFFALHVIAVPLVLIFLVVAHVLALHEVGSNNPDGIEIKANKNADGIPRDGIPFHPYYTVKDIMGTIVFLFVFFAIVFFMPEMGGYFLEHANFVPADPLKTPEHIAPVWYFTPFYAILRAIPSKLG----GVMFMGAAIVVLFFLPWIDR 340

[Close]

BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1113658232|gb|OJZ16754.1| (cytochrome b [Thiobacillus sp. 65-29])

HSP 1 Score: 536.184 bits (1380), Expect = 0.000e+0
Identity = 249/330 (75.45%), Postives = 294/330 (89.09%), Query Frame = 0

Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNAD-GIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRG 329
            M WIDDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L++Q+VTGIFLTMNYKPD A AF SVEYIMRDV++GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMS+WGAQVI++LF  +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDG+EIKK K+ + GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFFAPEMGGYFLE  NFIPADPLKTP HIAP+WYFTPFYA+LRA P M GS FPGVV MG +IV+LFFLPW+DR 
Sbjct:    8 MGWIDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVLQIVTGIFLTMNYKPDAALAFASVEYIMRDVEWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSFWGAQVIVNLFAAVPFIGEDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDPNTGIPLDGIPFHPYYTVKDIVGVVVFLMVFSAIVFFAPEMGGYFLEANNFIPADPLKTPPHIAPLWYFTPFYAILRAVPPMFGSQFPGVVAMGLSIVLLFFLPWLDRA 337

The following BLAST results are available for this feature:

BLAST of cytochrome b subunit of cytochrome bc1 vs. L. salmonis genes
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr

BLAST of cytochrome b subunit of cytochrome bc1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|298286798\|sp\|O31215.2\|CYB_ALLVD	9.165e-164	68.37	RecName: Full=Cytochrome b	[more]
gi\|6014852\|sp\|O54070.1\|CYB_RICPR	3.959e-109	52.24	RecName: Full=Cytochrome b	[more]
gi\|123266200\|sp\|Q1RIA4.1\|CYB_RICBR	1.720e-108	52.74	RecName: Full=Cytochrome b	[more]
gi\|81854122\|sp\|Q92IR1.1\|CYB_RICCN	1.720e-108	53.05	RecName: Full=Cytochrome b	[more]
gi\|75535806\|sp\|Q4UJM4.1\|CYB_RICFE	3.307e-108	52.44	RecName: Full=Cytochrome b	[more]
gi\|81826324\|sp\|Q68X99.1\|CYB_RICTY	6.166e-107	50.89	RecName: Full=Cytochrome b	[more]
gi\|117886\|sp\|P23134.1\|CYB_RHORU	4.487e-103	53.21	RecName: Full=Cytochrome b	[more]
gi\|6014851\|sp\|P81378.1\|CYB_BLAVI	2.656e-97	48.47	RecName: Full=Cytochrome b	[more]
gi\|338818076\|sp\|D5ANZ3.1\|CYB_RHOCB	1.549e-96	46.13	RecName: Full=Cytochrome b	[more]
gi\|338817833\|sp\|P0CY47.1\|CYB_RHOCA	2.873e-96	46.13	RecName: Full=Cytochrome b	[more]

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BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1088648239\|gb\|OHE61240.1\|	0.000e+0	76.83	cytochrome B [Thiobacillus sp. GWE1_62_9]	[more]
gi\|1113392310\|gb\|OJW55283.1\|	0.000e+0	76.83	cytochrome b [Thiobacillus sp. 65-1059] >gi\|111343...	[more]
gi\|499631610\|ref\|WP_011312344.1\|	0.000e+0	75.91	cytochrome b [Thiobacillus denitrificans] >gi\|7405...	[more]
gi\|1064204594\|gb\|ODV00410.1\|	0.000e+0	75.38	cytochrome B [Thiobacillus sp. SCN 63-57]	[more]
gi\|1113601228\|gb\|OJY60382.1\|	0.000e+0	75.38	cytochrome b [Thiobacillus sp. 0-1251]	[more]
gi\|1273663933\|gb\|PID63297.1\|	0.000e+0	78.59	cytochrome b [Gammaproteobacteria bacterium]	[more]
gi\|1214910738\|ref\|WP_088920744.1\|	0.000e+0	78.29	cytochrome bc complex cytochrome b subunit [Granul...	[more]
gi\|517330955\|ref\|WP_018506447.1\|	0.000e+0	75.38	cytochrome b [Thiobacillus thioparus]	[more]
gi\|1273742632\|gb\|PIE35483.1\|	0.000e+0	78.29	cytochrome b [Gammaproteobacteria bacterium]	[more]
gi\|1113658232\|gb\|OJZ16754.1\|	0.000e+0	75.45	cytochrome b [Thiobacillus sp. 65-29]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold2845_size11892	supercontig	scaffold2845_size11892:467..3600 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:respiratory electron transport chain

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold2845_size11892-processed-gene-0.1-mRNA-1	snap_masked-scaffold2845_size11892-processed-gene-0.1-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold2845_size11892:467..3600-

gene from alignment at scaffold2845_size11892:467..3600-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold2845_size11892-processed-gene-0.1 ID=snap_masked-scaffold2845_size11892-processed-gene-0.1|Name=cytochrome b subunit of cytochrome bc1|organism=Tigriopus kingsejongensis|type=gene|length=3134bp|location=Sequence derived from alignment at scaffold2845_size11892:467..3600- (Tigriopus kingsejongensis)
ATGACATGGATTGACGACCGGTTCCCGCTCTCGGAAACCTACGAATATCA
CATGTCCCAGTACTGGGCGCCGAAGAATTTCAACTTCTGGTATTACTTTG
GTGTCTTGTCCTTTGTCATGTTGATCATTCAATTGGTCACGGGCATCTTC
CTCACCATGAACTACAAACCCGATGGCGCTGCGGCGTTTACCTCGGTTGA
GTACATCATGCGGGATGTGGACTACGGTTGGTTGATTCGCTACATGCACT
CAACGGGCGCGTCCTTCTTCTTTATCGTCGTCTATCTGCACATGTTCCGC
GGACTAATGTACGGCTCTTACCAAAAGCCCCGTGAGTTGATCTGGGTGTT
TGGTATGTTTATCTATGTGGCACTGATGGCAGAGGCCTTCATGGGTTACT
TGCTGCCTTGGGGCCAGATGTCCTACTGGGGTGCGCAGGTTATCTTGTCG
CTGTTCAACACCATTCCATGGATCGGTCCTGCACTGACCGAATGGGTGCG
TGGTGACTTTATCGTCTCGGATATCACGCTGAACCGCTTCTTTGCGTTCC
ACGTCATCGCTGTGCCGCTGATTTTGGTTGCCTTGGTGTTCTTGCACATT
GTTGCGCTACATCACGTGGGTTCAAACAACCCTGACGGTGTTGAAATCAA
GAAAAACAAAAATGCAGACGGCATTCCGTTGGACGGTATCCCGTTCCACC
CGTACTACACAGTTAAAGATACCTTTGGTACTGGTGTGTTCTTAATCGTC
TTCTTTGCGGTGGTGTTCTTTGCTCCTGAGATGGGTGGCTACTTCCTAGA
ACACGCGAACTTTATCCCTGCCGATCCACTTAAAACGCCTGAGCACATTG
CGCCGGTTTGGTACTTCACGCCTTTCTACGCCATGTTACGTGCGACACCA
TCCATGATGGGTTCAGCATTCCCGGGTGTTGTGGTGATGGGCGCAGCTAT
TGTGGTGCTGTTCTTCTTGCCTTGGATTGATCGCGGTACGGTGCGTTCTA
TCCGCTATCGTTGCACCGCGTTTAAAGTGAACTTGTTCATGTTGGCGCTC
GCTTTTGTTGTGCTGGGTTATTACGGCATGCAAGCACCAACTGATCTCGG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTTGTTTATTTTGGTTACTTCATCGCGCTGTTTATCATCAGTAAA
AATGAAAACACCAAGCCTGTACCAGAGAGGGTGACTCACTAATGTTGGGA
CGTAAACTTATCGTTGCCGCTGTCGCCTGTTTTGCCTGTATTTGCGCAGG
CTGCAGGTGGGGGTGGGCATATCGAGACTGTGCATATTCAACCTGACAAC
AAAGCCTCGCTACAGCGCGGCGCACGTACCTACGTCAACTACTGCATCGG
CTGTCATAGCTTGAAGTATCTGCGTTACAACCGCATGGCAGAAGACCTAG
GGTTGCCGGCTGACATTGTTGAAGACAACTTGATCTTCACCAGCAATGAA
GACGGTGAGCACCACAAAGTGACGGACATGATGCACAGTTCGATGACCAC
TGAATACGCCAAAGGCGCGTTCGGTGTGGCGCCGCCTGATTTGTCTCTGA
TCGCTCGTTCACGTGGTATTGACTGGCTCTATACCTATTTGACGACTTTC
CACATTGATGAGTCGCGCACCGGTACTGGCCATAACAACTTGGCTTTCCC
CGATGTGGGCATGCCTAACGTGATGTGGGAGTTGCAGGGTTTGCAACGTG
CGGTTTACACCGAGACTGATGATGGTCACGGTGAGACGCATAAGGTCTTT
GAAGGCTTTGAGCAGGTTACTGAAGGTAGCTTGTCTGCGGCAGAATATGA
CAAAGTTGCGCGAGATCTGGTAAATTTCCTTCATTATGCTGCGGAGCCAG
GACGGGCTCAGCGTATCAGTATGGGTATTTGGGTGATGTTGTTCTTGTTT
GTATTTACAGCAGGCGCCTATGTACTGAAGAAGGAGTGGTGGCGCGACGT
GCGCTAAAACTGCCTTTTCTCGAGGCTGGGACGGGTATCTCTCGAGTGCC
CGTCCTTCTTCGTTTGTAGTAATGCTGTTTTCTGCAAAGTATTTAGACTT
TGCGGGTTCTATTTGCTGATAGAGAGCGTGATTGCTCGGCTGTCGGCCTA
CTTGGAGTAAATCGTGACTGCCATTGCCCGTAGATCGGTAATGACGCTGT
TTTCAGTACCTAGTGACATGCACAGCCATCGGGTGCGTGTCGTGTTGTCA
GAGAAAGACATCGTTGTTGAAGTTGAAGACGTTGATCCAGATTATTTGCC
AGAGGATCTGCAGCACCTGAACCCCTATAACACCGTGCCCACACTCGTTG
ATCGGGACTTGGTGCTTTATGACTCACGCGTTATCGCTGAGTATTTGGAC
GAGCGTTTCCCGCACCCGCCGCTGATGCCGGTTGATCCCGTTTCACGTGC
GCGCACGCGATTGGCTTTGTATCGAGTTGAAAACGACTGGTATCCGCTGG
CGCACACACTGGAAAACGGTAGCGAGAAAAAACGCACCGAGGCGCGTAAA
TTGATGCGCGAAAGCCTTGTGGCTTCTGCGGAAATTTTTGAGCTCAAGCC
GTTCTTTTTGTCTGATGAATTCTCGCTTGTGGATGCCACAATTGCGCCGC
TGCTGTGGCGCTTGCCAAAGTATGGCGTGGATTTGCCAAAAGAGACCAAG
CCCATCCAGGACTATGCCGAGCGCATGTTTAAGCGTTCGGGTTTTGTTGA
TAGTTTGACCGAAGTAGAGCGTGAGATGCGTTAA

Synonyms

The feature 'cytochrome b subunit of cytochrome bc1' has the following synonyms


Synonym
Tk03588

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