thyroid hormone receptor alpha 1, snap_masked-scaffold28_size608977-processed-gene-1.5 (gene) Tigriopus kingsejongensis

Overview


Name	thyroid hormone receptor alpha 1
Unique Name	snap_masked-scaffold28_size608977-processed-gene-1.5
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22")

HSP 1 Score: 127.102 bits (318), Expect = 2.174e-32
Identity = 94/392 (23.98%), Postives = 174/392 (44.39%), Query Frame = 0

Query:   42 KICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRRYQSHV--KSSPNLPRVPDL-ILNSDDTTYISDQMRMMDFHFHQSMDAVCRQKPDF---------------------------IRQMAVLSYYGGNSDYQFYQEFNILCNDFVFQVLSSIQEFRDLPWQDCQELFS-VNSQIMIALKHAVSLQETDWCFVKIIERALKSGQFPMLNELGHELAAHGLSEKKPQLTYNQVFSSPWAANGQDEDRHLFLTQKMQGWPRKKDTDRVDDVQMNLLKLIILF--STEFVTLE-----RGDIVEHVQMRFIRLLQKYLKFKYGSEAGVKLGNGLLILSYAKEV 395
            ++C +CG+VAG H YYGGQ C+ CRAFFRR VQ + Y+   C     +C+I+  TR+ CQ CRF+KC+ +GM+ +WVL D ER+ +  + +   ++P LP   D   L S + +++      +   F  +++++  +  DF                           I+ ++ +S     S   F QE   +  D  F  +++ +E   +   +C ++   +NS  ++ LK+  +LQ         IE  ++           H +  H L                +     +  R L L  ++  W    +     D    ++   ILF   T+ VTL        ++++  Q+ ++++L++Y + +Y  ++  K   G+++ S   EV
Sbjct:  104 RLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKKSAMILNNNTPLLPSFDDPGGLTSLEVSFVFTINNKLRKSFFDNVNSMVIRNSDFLIDFVDYLAFPARSEYPYLRMAMSLEKIQFLSFISMGTSRSSLHFSQEDLYILYDINFPKINTFREVSSITTTNCPDIDELINSVHLLHLKNNETLQN----LPSRIEFTIQ-----------HYILNHHL----------------YPNENDNHSRFLHLVSQINSWVMNDENHTKKDKFSYIIMFFILFFDRTDSVTLSGVKFRDPELIDRAQLIYVQMLKRYFQRRYPRKSSKKFLKGIMLPSLIAEV 464

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BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19")

HSP 1 Score: 124.79 bits (312), Expect = 1.361e-31
Identity = 90/396 (22.73%), Postives = 180/396 (45.45%), Query Frame = 0

Query:   17 DQNQITQGSRSHLDSDGSSSV---SSTSKICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRRYQSHVKSSPNLPRVPDLI----LNSDDTTYISDQMRMMDFHFHQSMDAVCRQKPDFIRQMAVLSYYGGNSDYQFYQEFNILCNDFVFQVLSSIQEFRDLPW--QDCQELFSVNSQIMIALKHAVSLQETDWCFVKIIERALKSGQFPMLNELGHELAAHGLSEKKPQLTYNQVFSSPWAANGQDE-DRHLFLTQKMQGWPRKKDTDRVDDVQMNLLKLIILF-------STEFVTLERGDIVEHVQMRFIRLLQKYLKFKYGSEAGVKLGNGLLILSYAKEV 395
            DQ    + + + L  D S  +    +  ++C +CG+VAG H YYGGQ C+ CRAFFRR VQ + Y+   C     +C+I+  TR+ CQ CRF+KC+ +GM+++WV  D ER+ + +S +  + N P +P       L S + + +      +  +F  +++ + ++  DF+        +   S+Y + +    L    +  ++S       L +  +D   L+ +NS  +   +   S++  ++  +  +  +++      L  L +      L  +      + + +     N  D     L L  ++  W    +     D    ++ L ILF           V  +  ++++  Q+ ++++L++Y + KY  ++  K   G+++ S   EV
Sbjct:   77 DQENFNELNSTTLSEDSSQIIIGRQALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSK-KSAMTLNNNKPPLPSFNDPEGLTSIEVSIVFTINNNLHKNFLDNLNTMVKRDSDFLIDFVDYLAFPTRSEYPYLKMAMSLEKIQLLSLISMGTSNSSLHFSQEDLYVLYQINSPKINIFRELSSIKNPNFPDIDELINSVR------LLHLNNNETIQNLPSRVEFTLQHYLLNHDLCPNENDNYSTFLHLVSQINSWVMDDENVIKQDKFSYIIMLFILFFDRTDSVKISGVKFKDPEMIDRAQLAYVQMLKRYFQRKYPRKSSKKFLKGIMLPSLIAEV 465

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BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24")

HSP 1 Score: 90.5077 bits (223), Expect = 7.283e-20
Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = 0

Query:   40 TSKICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRR 127
            T  +C VCGD A  H +YGG  C  CRAFFRR V +  + +  C   +  C+I  TTR+ CQ CR++KCL SGMK +WVLS+ E+  R
Sbjct:   87 TEMVCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPK--HTTYFC-STDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSR 171

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BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5")

HSP 1 Score: 86.2705 bits (212), Expect = 1.783e-18
Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 0

Query:   41 SKICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSN----CLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER 124
            + +C +CGD+A  HN+YG   C  CRAFF R V +   +   CV  N +    C+I K TR  CQ CR+R CL +GM  ++V +  ER
Sbjct:  134 TDVCRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEER 221

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BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5")

HSP 1 Score: 79.7221 bits (195), Expect = 2.282e-16
Identity = 99/420 (23.57%), Postives = 168/420 (40.00%), Query Frame = 0

Query:   17 DQNQITQGSRSHLDSDGSSSVSSTSKICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVCRQKPDFIRQMAVLSYYGGNSDYQFYQEFNILCNDFVFQVLSSIQEFRDLP-WQDCQELFSVNSQIMIALKHAVSLQETDWCFVKIIERALKSGQFPMLNELGHELAAHGLSEKKPQLTYNQVFSSPWAANGQDEDRHLFLTQKM---QGWPRKKDTDRVDDVQMNLLKLIILFSTEFVTLERGDIVEHVQMRFIRLLQKYLKFKYGSEAGVKLGNGLLILSYAKEVIDIQQRQFWPAQHWMDVCALGLLSAALVCESGADWSL 432
            D + +   S     S  S + SST  +C+VCGD +    +YG   C GC++FF+RCV+R +  +  C  +  +C +D+  R +CQ CRF+KCL  GMK        E  ++ ++   S+P      DL   +  ++Y+S  + ++            R +P    Q   L     N+        + +C      + S+I+  R++P + + Q            +   V L    W  + +    L + Q  M   +   L A GL             +SP AA     DR +     +   Q    K    +VD  +   LK I+LFST+   L    ++E +Q +    L  Y K  + ++   + G  LL L   + V      Q +  +         L+   L+C +   W +
Sbjct:   48 DHHIVNNSSSLTAPSPSSGTNSSTEILCVVCGDKSS-GKHYGQFTCEGCKSFFKRCVRRSL--TFQC-RSKKSCPVDQHHRNQCQHCRFKKCLNMGMK-------KEAVQKGRTTTTSAPIFNYSNDLFSPNTGSSYLSTYISLL-----------LRAEPYTTSQYGQLQMAASNNIIG----IDNICEFAARLLFSAIEWARNIPGFPELQ------------ITDQVGLLRMVWSELFV----LNASQCHMPLHVAPLLVAXGL------------HASPLAA-----DRXVAFMDHIRVFQEQVEKLKALQVDAAEXACLKAIVLFSTDPPGLTDITLIEQLQEKSQCALDDYCKIHHPTKPS-RFGKLLLRLPSLRTVSSAVIEQLFFIRLVGKTPIETLIRDMLLCGTAFQWPI 407

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BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10")

HSP 1 Score: 77.411 bits (189), Expect = 1.456e-15
Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 0

Query:   42 KICLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER--KRRYQSHVKSSPNLPRVPDLIL 146
            + CLVCGD+A G H  YG   C  C+AFF+R +Q +I  +     A++ C I+K  R+ CQ CRF+KCL  GM    V  D  R  +++Y+  ++SSP +   P   L
Sbjct:  269 RTCLVCGDIASGFH--YGVSSCEACKAFFKRTIQGNIEYT---XPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESSPYIQPPPKKTL 371

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BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6")

HSP 1 Score: 77.411 bits (189), Expect = 1.557e-15
Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 0

Query:   31 SDGSSSVSSTSKICLVCGD-VAGLHNYYGGQVCSGCRAFFRRCVQ-RDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRR 127
            SD   S     ++C VCGD V+G H  YG   C  C+ FF+R VQ + +Y    CV A+ +C+IDKT R+RC  CRF+KCL  GMK+  V  D  R  R
Sbjct:  173 SDQPDSKDGMEELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNKKVYT---CV-ADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGR 265

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BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3")

HSP 1 Score: 76.6406 bits (187), Expect = 2.446e-15
Identity = 36/76 (47.37%), Postives = 43/76 (56.58%), Query Frame = 0

Query:   44 CLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVL 119
            C +C D A  H +YG   C  CRAFFRR V   I  +      +  C I K TR+ CQ CRF KCL +GMK TWV+
Sbjct:   63 CHICSDTANDHIHYGAIACXSCRAFFRRAV---ICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVM 135

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BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1")

HSP 1 Score: 75.0998 bits (183), Expect = 1.063e-14
Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 0

Query:   40 TSKICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDI-YQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRR 127
             S +C VCGD A    +YG + C GC+ FF+R VQ++  Y  L    A+ NC +DK  R RCQ CRF+KCL  GM    V +D  + RR
Sbjct:  405 ASLLCAVCGDNAACQ-HYGVRTCEGCKGFFKRTVQKNAKYVCL----ADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRR 488

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BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53")

HSP 1 Score: 73.9442 bits (180), Expect = 2.733e-14
Identity = 43/94 (45.74%), Postives = 55/94 (58.51%), Query Frame = 0

Query:   30 DSDGSSSVSSTSKICLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQ-RDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSD 121
            D++  SS    S +C++C D A GLH  YG   C GC+ FF+R VQ + IY    CV A+  C I+K  R RCQ CRF+KCL  GM +  V  D
Sbjct:  269 DNNNPSSQPQQSLVCMICEDRATGLH--YGIITCEGCKGFFKRTVQNKRIYT---CV-ADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVRED 356

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BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
Match: gi|6094469|sp|Q98867.1|THAA_DANRE (RecName: Full=Thyroid hormone receptor alpha-A; Short=zTRalpha-A; AltName: Full=Nuclear receptor subfamily 1 group A member 1-A; AltName: Full=Thyroid hormone receptor alpha-1; Short=TRalpha-1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.462e-17
Identity = 64/215 (29.77%), Postives = 102/215 (47.44%), Query Frame = 0

Query:   44 CLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER--KRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVC---RQK----PDFIRQMAVLSYYGGNSDYQFYQEFNILCNDFVFQVL---SSIQEFRDLPWQD--------CQELFSVNSQI 237
            C+VCGD A G H  Y    C GC+ FFRR +Q++++ S  C + +S C+IDK TR +CQ CRFRKC+  GM +  VL D +R  KRR     +       +   + N  + T    ++  M    H+  +A     +QK    P+ I Q    +      D + + EF  +    + +V+     +  F +LP +D        C E+ S+ + +
Sbjct:   57 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPSYSC-KYDSCCIIDKITRNQCQLCRFRKCISVGMAMDLVLDDSKRVAKRRLIEENREKRKKEEIVKTLHNRPEPTVSEWELIRMVTEAHRHTNAQGPHWKQKRKFLPEDIGQSPAPTSDNDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAV 268

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BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
Match: gi|135705|sp|P10827.1|THA_HUMAN (RecName: Full=Thyroid hormone receptor alpha; AltName: Full=Nuclear receptor subfamily 1 group A member 1; AltName: Full=V-erbA-related protein 7; Short=EAR-7; AltName: Full=c-erbA-1; AltName: Full=c-erbA-alpha)

HSP 1 Score: 87.8113 bits (216), Expect = 1.467e-17
Identity = 67/226 (29.65%), Postives = 111/226 (49.12%), Query Frame = 0

Query:   44 CLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER------------KRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVC-----RQK--PDFIRQMAVLSYYGGNS-DYQFYQEFNILCNDFVFQVL---SSIQEFRDLPWQD--------CQELFSVNSQI 237
            C+VCGD A G H  Y    C GC+ FFRR +Q++++ +  C + +S C+IDK TR +CQ CRF+KC+  GM +  VL D +R            +RR +  ++S   L + P+      D  +I+ +        H+S +A       R+K  PD I Q  ++S   G+  D + + EF  +    + +V+     +  F +LP +D        C E+ S+ + +
Sbjct:   53 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPTYSC-KYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRS---LQQRPEPTPEEWDLIHIATEA-------HRSTNAQGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAV 265

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BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
Match: gi|13124576|sp|O97716.1|THA_PIG (RecName: Full=Thyroid hormone receptor alpha; AltName: Full=Nuclear receptor subfamily 1 group A member 1; AltName: Full=c-erbA-1; AltName: Full=c-erbA-alpha)

HSP 1 Score: 87.8113 bits (216), Expect = 1.980e-17
Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 0

Query:   44 CLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER------------KRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVC-----RQK--PDFIRQMAVLSYYGGNS-DYQFYQEFNILCNDFVFQVL---SSIQEFRDLPWQD--------CQELFSVNSQI 237
            C+VCGD A G H  Y    C GC+ FFRR +Q++++ +  C + +S C+IDK TR +CQ CRF+KC+  GM +  VL D +R            +RR +  ++S   L + P+      D  +++ +        H+S +A       R+K  PD I Q  ++S   G+  D + + EF  +    + +V+     +  F +LP +D        C E+ S+ + +
Sbjct:   53 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPTYSC-KYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRS---LQQRPEPTPEEWDLIHVATEA-------HRSTNAQGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAV 265

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BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
Match: gi|52001262|sp|P63059.1|THA_RAT (RecName: Full=Thyroid hormone receptor alpha; AltName: Full=Nuclear receptor subfamily 1 group A member 1; AltName: Full=c-erbA-1; AltName: Full=c-erbA-alpha)

HSP 1 Score: 87.4261 bits (215), Expect = 2.226e-17
Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 0

Query:   44 CLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER------------KRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVC-----RQK--PDFIRQMAVLSYYGGNS-DYQFYQEFNILCNDFVFQVL---SSIQEFRDLPWQD--------CQELFSVNSQI 237
            C+VCGD A G H  Y    C GC+ FFRR +Q++++ +  C + +S C+IDK TR +CQ CRF+KC+  GM +  VL D +R            +RR +  ++S   L + P+      D  +++ +        H+S +A       R+K  PD I Q  ++S   G+  D + + EF  +    + +V+     +  F +LP +D        C E+ S+ + +
Sbjct:   53 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPTYSC-KYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRS---LQQRPEPTPEEWDLIHVATEA-------HRSTNAQGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAV 265

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BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
Match: gi|284018143|sp|P63058.2|THA_MOUSE (RecName: Full=Thyroid hormone receptor alpha; AltName: Full=Nuclear receptor subfamily 1 group A member 1; AltName: Full=c-erbA-1; AltName: Full=c-erbA-alpha)

HSP 1 Score: 87.4261 bits (215), Expect = 2.226e-17
Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 0

Query:   44 CLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER------------KRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVC-----RQK--PDFIRQMAVLSYYGGNS-DYQFYQEFNILCNDFVFQVL---SSIQEFRDLPWQD--------CQELFSVNSQI 237
            C+VCGD A G H  Y    C GC+ FFRR +Q++++ +  C + +S C+IDK TR +CQ CRF+KC+  GM +  VL D +R            +RR +  ++S   L + P+      D  +++ +        H+S +A       R+K  PD I Q  ++S   G+  D + + EF  +    + +V+     +  F +LP +D        C E+ S+ + +
Sbjct:   53 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPTYSC-KYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRS---LQQRPEPTPEEWDLIHVATEA-------HRSTNAQGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAV 265

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BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
Match: gi|2500920|sp|Q28570.1|THA_SHEEP (RecName: Full=Thyroid hormone receptor alpha; AltName: Full=Nuclear receptor subfamily 1 group A member 1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.327e-17
Identity = 78/274 (28.47%), Postives = 132/274 (48.18%), Query Frame = 0

Query:   44 CLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER------------KRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVC-----RQK--PDFIRQMAVLSYYGGNS-DYQFYQEFNILCNDFVFQVL---SSIQEFRDLPWQDCQELFSVNSQIMIALKHAVSL-QETDWCFVK----IIERALKSGQFPMLN----ELGHELAAHGLSE 284
            C+VCGD A G H  Y    C GC+ FFRR +Q++++ +  C + +S C+IDK TR +CQ CRF+KC+  GM +  VL D +R            +RR +  ++S   L + P+      D  +++ +        H+S +A       R+K  PD I Q  ++S   G+  D + + EF  +    + +V+     +  F +LP +D   L       +++L+ AV    E+D   +     +    LK+G   +++    ELG  L+A  L +
Sbjct:   53 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPTYSC-KYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRS---LQQRPEPTPEEWDLIHVATEA-------HRSTNAQGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIFELGKSLSAFNLDD 313

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BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
Match: gi|135713|sp|P18117.1|THBA_XENLA (RecName: Full=Thyroid hormone receptor beta-A; Short=TRbetaA; Short=xTR; AltName: Full=Nuclear receptor subfamily 1 group A member 2-A)

HSP 1 Score: 84.3445 bits (207), Expect = 1.382e-16
Identity = 64/233 (27.47%), Postives = 111/233 (47.64%), Query Frame = 0

Query:   27 SHLDSDGSSSVSSTSKICLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER--KRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVC---RQK----PDFIRQMAVL-SYYGGNSDYQFYQEFNILCNDFVFQVL---SSIQEFRDLPWQD--------CQELFSVNSQI 237
            S+LD D         ++C+VCGD A G H  Y    C GC+ FFRR +Q++++ S  C +    C+IDK TR +CQ CRF+KC+  GM    VL D++R  KR+     +       +   ++   + T    ++  +    H + +A     +QK    P+ I Q  ++ +  GG  D + + +F  +    + +V+     +  F +LP +D        C E+ S+ + +
Sbjct:   11 SYLDKD---------ELCVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPSYSC-KYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDNKRLAKRKLIEENREKRRKDEIQKSLVQKPEPTQEEWELIQVVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAV 231

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
Match: gi|1729929|sp|Q02965.2|THB_LITCT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.645e-16
Identity = 64/233 (27.47%), Postives = 110/233 (47.21%), Query Frame = 0

Query:   27 SHLDSDGSSSVSSTSKICLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER--KRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVC---RQK----PDFIRQMAVL-SYYGGNSDYQFYQEFNILCNDFVFQVL---SSIQEFRDLPWQD--------CQELFSVNSQI 237
            S+LD D         ++C+VCGD A G H  Y    C GC+ FFRR +Q++++ S  C +    C+IDK TR +CQ CRF+KC+  GM    VL D +R  KR+     +       +   ++   + T    ++  +    H + +A     +QK    P+ I Q  ++ +  GG  D + + +F  +    + +V+     +  F +LP +D        C E+ S+ + +
Sbjct:   11 SYLDKD---------ELCVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPSYSC-KYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENREKRRKDELQKTLVQKPEPTPEEWELIQVVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAV 231

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
Match: gi|6094471|sp|Q91242.1|THAB_PAROL (RecName: Full=Thyroid hormone receptor alpha-B; Short=THR-alpha-B; AltName: Full=Nuclear receptor subfamily 1 group A member 1-B)

HSP 1 Score: 83.5741 bits (205), Expect = 2.864e-16
Identity = 66/217 (30.41%), Postives = 105/217 (48.39%), Query Frame = 0

Query:   44 CLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER--KRRYQSHVKSSPNLPRVPDLILNSDDTTYIS-DQMRMM-DFHFH-QSMDAVCRQK----PDFIRQMAVLSYYGGNS-DYQFYQEFNILCNDFVFQVLSSIQEF----RDLPWQD--------CQELFSVNSQI 237
            C+VCGD A G H  Y    C GC+ FFRR +Q++++ S  C + +  C+IDK TR +CQ CRF+KC+  GM +  VL D +R  KRR     +       +   + N  + T    + +RM+ + H H  +  A  +QK    PD I Q  V     G+  D + + EF  +    + +V+   ++       LP +D        C E+ S+ + +
Sbjct:   33 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPSYSC-KYDCCCIIDKITRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRRLIEENRERRKKEEIVKTLQNRPEPTGAEWELIRMVTEAHRHTNAQGAQWKQKRKFLPDKIGQSPVAPTSDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSEQLPCEDQIILLKGCCMEIMSLRAAM 246

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
Match: gi|6094470|sp|Q91241.1|THAA_PAROL (RecName: Full=Thyroid hormone receptor alpha-A; Short=THR-alpha-A; AltName: Full=Nuclear receptor subfamily 1 group A member 1-A)

HSP 1 Score: 83.1889 bits (204), Expect = 3.580e-16
Identity = 63/216 (29.17%), Postives = 103/216 (47.69%), Query Frame = 0

Query:   44 CLVCGDVA-GLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER---KRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRM-MDFHFHQSMDAVC-RQKPDFI-----RQMAVLSYYGGNSDYQFYQEFNILCNDFVFQVL---SSIQEFRDLPWQD--------CQELFSVNSQI 237
            C+VCGD A G H  Y    C GC+ FFRR +Q++++ S  C +    C+IDK TR +CQ CRF+KC+  GM +  VL D +R   +R  + + +       V  L +  +  T   + +RM  D H H +      +QK  F+     +   V +  G   D + + EF  +    + +V+     +  F +LP +D        C E+ S+ + +
Sbjct:   59 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPSYSC-KYEGCCIIDKITRNQCQLCRFKKCISVGMAMDLVLDDSKRVAKRRLIEENREKRKREEMVRTLQIRPEPDTAEWELIRMATDAHRHTNAQGSSWKQKRKFLSDDIGQSPMVPTSDGDKVDLEAFSEFTKIMTPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAV 271

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. nr
Match: gi|657600342|gb|AID52832.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 511.916 bits (1317), Expect = 9.745e-178
Identity = 258/415 (62.17%), Postives = 318/415 (76.63%), Query Frame = 0

Query:    3 GQERNF--MQELEHFLDQNQITQGSRSHLDSDGSSSVSSTS---KICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRRYQ-----SHVKS-----SPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVCRQKPDFIRQMAVLSYYGGNSDYQFYQEFNILCNDFVFQVLSSIQEFRDLPWQDCQELFSVNSQIMIALKHAVSLQETDWCFVKIIERALKSGQFPMLNELGHELAAHGLSEKKPQLTYNQVFSSPWAANGQDEDRHLFLTQKMQGWPRKKDTDRVDDVQMNLLKLIILFSTEFVTLERGDIVEHVQMRFIRLLQKYLKFKYGSEAGVKLGNGLLILSYAKEVIDIQQRQ 402
             QE  F  +QE+  F+D  +  Q +R+HLDS+GSSS SS     +IC VCGD AG HNYYGGQ CSGCRAFFRR VQRD+  +L CV+ ++ C+++K+TRRRCQ CRF +CL  GM+  WVLSDHER+RRY+     SH  S     SP   R+  L+L ++D T+I+  M+MMD HF ++MD VC QK DFIR+MAV+SY+GG SD++FY+EF  LC++FVFQV+SS+ EFR LP QD QEL  VN Q M+ALK+AVSL ETDWCFV  +ERALKSG+FP LN+   EL A G+SE KP+L Y+QVFSSPWAA+  DE+RHLFL  KMQ WPRK   DRVDDVQMNLLKLIILFS+EFV L+R DIVE  QM+FI LLQKY+KF+YG EAGV+LGNGL++LSYAKE IDIQ+R+
Sbjct:    2 AQESTFDLIQEIADFIDNYEF-QSTRTHLDSEGSSSTSSDPDLRRICQVCGDEAGQHNYYGGQSCSGCRAFFRRIVQRDLQANLICVDNSNECVVNKSTRRRCQFCRFHRCLAIGMRPGWVLSDHERERRYRKTANGSHAVSIATQKSPVSNRISLLVLTTNDNTHITAHMKMMDAHFVRNMDVVCAQKQDFIRKMAVMSYFGGQSDFEFYEEFYSLCDNFVFQVMSSVLEFRSLPVQDQQELVRVNGQYMVALKYAVSLHETDWCFVYFLERALKSGKFPYLNDFAQELDAFGMSEHKPRLMYSQVFSSPWAASAADEERHLFLVNKMQSWPRKDAQDRVDDVQMNLLKLIILFSSEFVNLQRPDIVEQTQMKFIGLLQKYMKFRYGPEAGVRLGNGLMLLSYAKEAIDIQKRR 415

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. nr
Match: gi|657600344|gb|AID52833.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 290.812 bits (743), Expect = 3.437e-89
Identity = 157/416 (37.74%), Postives = 238/416 (57.21%), Query Frame = 0

Query:    7 NFMQELEHFLDQNQITQGSRSHLDSDGSSSVSST------SKICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRRYQSHVKSS-----------------PNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVCRQKPDFIRQMAVLSYYGGNSDYQFYQEFNILCNDFVFQVLSSIQEFRDLPWQDCQELFSVNSQIMIALKHAVSLQETDWCFVKIIERALKSGQFPMLNELGHELAAHGLSEKKPQLTYNQVFSSPWAANGQDEDRHLFLTQKMQGWPRKKDTDRVDDVQMNLLKLIILFSTEFVTLERGDIVEHVQMRFIRLLQKYLKFKYGSEAGVK-LGNGLLILSYAKEVIDI 398
            NF  EL   L  N   Q S   LDS+ +   S+       +  C +C + AG HNYYGG+ C  CRAFFRR VQ   Y+   C +    C I+  TRR CQ CRF+KCL SGM++ WVL D ER RR+    KS+                 P  P     +L  +        M++ D    +S+      +P+F++++A  SY+GG  D  F Q+F ++C+ F   VL++ +EF+ L + D ++L  VN  ++   K +V++QET+ C V  IE+A KSG+FP LN++  +LA   ++++KP L YNQ ++SPWA++ + E R+  L  KM+ WPR      VD++QM L K+II FS +F+ LE+  +VE +QM+++ +L +YL F+YG++A  K L  GL++ +YA+E   I
Sbjct:  151 NFPSEL--ILQVNPEPQKSPGALDSEENLPKSTMPPSNWDNTKCYICQEKAGKHNYYGGKACPSCRAFFRRAVQSKYYEIFFCNKG-EKCEINLKTRRSCQFCRFKKCLASGMRVAWVLPDGERNRRFNKLHKSAKKNNSQIEGDLKVVAKKPKGPLEIQGVLPGEIDMIRGVHMKV-DSLGAKSLREFILAQPEFMKKLANFSYFGGQPDMDFIQKFQLMCDRFAHFVLTTSEEFKMLSFGDRRQLIEVNGPLLNRFKCSVTIQETNSCLVNGIEQATKSGEFPYLNDIVEKLAQLNMTDRKPILAYNQFYASPWASSKEAEGRYFNLMIKMKAWPRDNIASPVDEIQMTLAKMIIAFSPDFLNLEQRSVVEAIQMKYVSMLHRYLVFRYGAKAATKRLAAGLMMSTYAREAQSI 562

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. nr
Match: gi|657600348|gb|AID52835.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 125.176 bits (313), Expect = 9.182e-28
Identity = 106/410 (25.85%), Postives = 193/410 (47.07%), Query Frame = 0

Query:   22 TQGSRSHLDSDGSSSVSSTSKICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVCRQKPDF-IRQMAVLSYYGGNSDYQFYQEFNILCNDFVF--------------QVLSSIQEF---RDLPWQDCQELFSVNSQIMIALKHAV------SLQETDWCFVKIIERALKSGQ--FPMLNELGH------ELAAH---GLSEKKPQLTYNQVFSSPWAANGQDEDRHLFLTQKMQGWPRKKDTDRVDDVQMNLLKLIILFSTEFVTLERGDIVEHVQMRFIRLLQKYLKFKYGSEAGVKLGNGLLILSYAKEVI 396
            T+ S    D+  + ++S   + C VC + +G H+YYG QVC  CRAFFRR      +    C ++ + C I+  + + C+ CR++KCL +GMK TWVL+D ER +R  +  +    L ++ +  +   + T+I +Q    + H       + + + DF ++   V++ +  ++   F +  + L  +  F              +V+ SI +    +D+   D   L S N  + ++ + AV       +++    F K I R LKS    +P  N + H      +L+ H      +K   L  +Q              R   L   +Q WP+       DD+ + L+ +I++FS++ + L+   +V  +Q ++  +L +Y+ FK   +A VKLG G+ I+S  +EV+
Sbjct:   86 TEDSSDFSDTPRTPNLSKPHRECPVCDNPSGKHSYYGAQVCFSCRAFFRRSTINSTFTEFQCKDSKT-CGINSKSWKSCKFCRYQKCLSAGMKSTWVLNDEERVQRNANRKR----LRKIREAGVAFSE-TFIGNQWTTDEEH------QIRQARNDFLLKGFGVIAQFCSSNPNIFDRYVDCLNGNTPFDPMLVGYTRRFIYSEVMKSISDLLIMKDIHPVDRFLLLSHNYPLWVSFEEAVQFRNHQEMEKIQQTFSKCI-RTLKSSSDLWPNAN-IDHLQRTFDKLSVHDNANFLDKLNNLITDQSM----------RRRRTQLITSIQSWPKISSRGLADDILLTLMTMILIFSSDSLKLQSEGVVSKIQNQYCYMLYRYVNFKSPGKAHVKLGEGMEIVSKVREVM 471

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. nr
Match: gi|657600350|gb|AID52836.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 122.479 bits (306), Expect = 8.290e-27
Identity = 101/381 (26.51%), Postives = 168/381 (44.09%), Query Frame = 0

Query:   32 DGSSSVSSTSKICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHER-----KRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVCRQKPDFIRQMAVLSYYGGNSDYQFYQEFNILCNDFVFQVLSSIQEFRDLPWQDCQELFSVNSQIMIALKHAVSLQETDWCFVKIIERALKSG-QF----PMLNELGHELAAHGLSEKKPQ-LTYNQVFSSPWAANGQDED---RHLFLTQKMQGWPRKKDTDRVDDVQMNLLKLIILFSTEF-VTLERGDIVEHVQMRFIRLLQKYLKFKYGSEAGVKLGNGLLILSYAKEVID 397
            +  S V +   +C +C DVAG H YYG Q C  CR FF+R V+   +    C +   NC I   +R+ C+ CRF+KCL SGMK  +V++ H++     K +    +K+      +  +    +    +S    ++ F +        + + +F+  +  L+  GG       + F             SI +   L   D   L S N   +  L  +V     D C     E  LK G +F    P ++++     A+ L  KKP+ LT +  F S    N   +D   RH  L  ++    R+      D + + LL  II+F+TEF V+L+    ++  Q +++ LL +YL+  Y   A  KL   ++I    ++V +
Sbjct:   79 ETQSEVGTQQPLCPICNDVAGKHFYYGVQACISCRGFFQRSVRNRFHLKFICCKGTQNCRITARSRKNCKWCRFQKCLQSGMKTCYVMT-HDKSGLPPKSKLILPIKAMVKTANLSQIFTEHEVDKALSIYKNLLSFGYRSYYQLFSQNEQEFMTFLRALNDQGGGPS-MISEAFTETNKQATINYFFSIDDMASLTPFDRMTLISHNFPSIFGLLWSVYSYTPDLC--TFYEEFLKHGYEFRDREPEIDKILMVFEANQLLGKKPKNLTIDVTFRS----NSATQDLIQRHDNLVHEVNSGLRESSQSSADYIIVMLLSHIIMFATEFAVSLQDKAKIQATQEKYLVLLHRYLRTHYQGRARAKLSETMMIFEPCRQVFE 451

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. nr
Match: gi|657600360|gb|AID52841.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 121.709 bits (304), Expect = 2.029e-26
Identity = 104/374 (27.81%), Postives = 163/374 (43.58%), Query Frame = 0

Query:   44 CLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHE--------RKRRYQSHVKS------------SPNLPRVPDLILNSDDTTYISDQ--------MRMMDFHFH----------QSMDAVCRQKPDFIRQMAVLSYYGGNSDYQFYQEF--NILCNDFVFQVLSSIQEFRDLPWQDCQELFSVNSQIMIALKHAVSLQETDWCFVKIIERALKSGQFPMLNELGHELAAHGLSEKKPQLTYNQVFSSPWAANGQDEDRHLFLTQKMQGWPRKKDTDRVDDVQMNLLKLIILFSTEFVTLERGDIVEHVQMRFIRLLQKYLKFKYGSE 377
            C VCGD A  H +YGG  C  CRAFFRR V +  Y +  C  ++SNC++   TR+ CQ CRF KC+ +GMK +WVLSD E        R R+ QS V              +P   +   +  +S+  +  + Q         R++ +H            Q+        P  + Q+  L++     D     EF   + C   + + +  +  F  L   D + L S N  ++  ++ A SL       ++   + L +G +   +E+ H    HG++         Q+F  PW A G    ++   T +      ++DT +V      L +L+ LF TE V L+    +E VQ     LL KYLK +YG +
Sbjct:  122 CHVCGDRAPNHCHYGGIACFSCRAFFRRSVPK--YDTYTC-SSSSNCVVTPATRKNCQKCRFDKCVEAGMKASWVLSDEEKLERLEKKRSRKGQSTVSMDSSGSSSPVSSYTPPSSQYDQMSESSEGQSRPASQESFGGPQESRILSYHEERCIEQWVGDLQTTRTTVEMSPQLLDQIVRLTHTHETIDTDTIVEFFKTVYCR--IVKFVGEVDGFSTLSDTDKKTLLSKNMDMLSTIQLASSLHPNGQGNLEA--QFLYTGHY---SEISHLRGHHGIA-------MEQIFVEPW-AKGDTHKKYFSSTIRQLAKLLREDT-KVS----TLFQLVALFHTENVELDNKGTIESVQEGMATLLHKYLKQRYGQQ 472

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. nr
Match: gi|728054567|gb|AIY67763.1| (HR97a-like receptor 4 [Tigriopus japonicus])

HSP 1 Score: 115.931 bits (289), Expect = 1.172e-24
Identity = 99/379 (26.12%), Postives = 175/379 (46.17%), Query Frame = 0

Query:   42 KICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVCRQKPDFIR--QMAVLSYYGGNSDYQFYQEFNILCN------DF----------VFQVLS-SIQEFRDLPWQDCQELFSVNSQIMIALKHAVSLQETDWC-----FVKIIERALKSGQF-PMLNELGHELAAHGLSEKKPQLTYNQVFSSPWAANGQDEDRHLFLTQKMQGWPRKKDTDRVDDVQMNLLKLIILFSTEFVT-LERGDIVEHVQMRFIRLLQKYLKFKYGSEAGVKLGNGLLILSYAKE 394
            ++C VC   AG HNYYGGQVC  CRAFFRR +Q   +    C +A   C+ID  +R+ C  CRF+KCLL+GM   W+++D ERK  ++   K S         I+ +     I    R ++  F         +   + R  +++VL+ +           + +  N      DF          +F+ ++  ++E  DL  +D + L   NS    AL  ++     D+        + ++ AL++    P L      L    +S   P L++   +S+    +    +    +  K+Q   R+     +D + + ++ L ++F ++  + L+ G  VE +Q   I +L +YL+ KYG +A  K+G  ++++SY +E
Sbjct:   69 RLCHVCNLPAGKHNYYGGQVCESCRAFFRRSIQNQTHPIYHC-KAKKCCIIDSKSRKSCAWCRFQKCLLAGMNPKWIITDQERK--FKLEAKQSK--------IMKAKMKQEIVPIQRPVELKFTVEEKLKVERLSKYARKFKVSVLANHLAQDIAPLKTLWKLALNLETPSVDFIHFLEEKETTIFRTIALGLEEMTDLDSEDRETLVQRNSTAFFALIMSIYFNPGDFARHLEDVTEALDIALQANDPNPDLKNAVETLEVIKMS-NFPGLSFETFYSNCPNKDENLSNAQRNIMNKIQSALREMPNKPIDAIIICIVILNLIFLSDGSSPLKDGKKVERIQNDQIFMLHRYLRSKYGDKASGKMGKLVMLMSYTQE 435

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. nr
Match: gi|1325265241|ref|XP_023336689.1| (oxysterols receptor LXR-alpha-like [Eurytemora affinis])

HSP 1 Score: 112.464 bits (280), Expect = 5.547e-23
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0

Query:   27 SHLDSDGSSSVSSTSKICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRRYQSHVK 133
            S    + SS +   + +C VCG+ AG H+YYGGQVC  CRAFFRR VQ   Y    C+  + +C I+  TR+ CQ CR+ KCL  GM+ +W+LS+ ER RR+    K
Sbjct:  167 SPFKRERSSRILCENPVCQVCGEKAGKHSYYGGQVCPSCRAFFRRSVQSRCYTGFRCINRSESCPINLLTRKNCQYCRYHKCLSCGMRPSWILSEEERIRRFHGRTK 273

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. nr
Match: gi|728054565|gb|AIY67762.1| (HR97a-like receptor 6 [Tigriopus japonicus])

HSP 1 Score: 111.309 bits (277), Expect = 7.314e-23
Identity = 111/435 (25.52%), Postives = 183/435 (42.07%), Query Frame = 0

Query:    5 ERNFMQELEHFLDQNQITQGSRSHLDSDG-----------SSSVSS----TSKICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLS-DHERKRRYQSHVKSSPNLPRVPDLILNSDDTTYISDQMRMMDFHFHQSMDAVCRQKPDFIRQMAVLSYYGGNSDYQFYQEFNILCNDFVF------QVLSSIQEFR----------DLPWQDCQELFSVNSQIMIALKHAVS-LQETDWC-FVKIIERALK--SGQFPMLNELGHELAAHGLSEKKPQLTYNQVFSSPWAANGQDEDRHL--FLTQKMQGWPRKKDTDRVDDVQMNLLKLIILFSTEFVTLERGDIVEHVQMRFIRLLQKYLKFKYGSEAGVKLGNGLLILSYAKEVIDIQQR 401
            + +F  +LE FL ++ +   S    D              SSSV      T  ICLVCG+ AG H YYGGQVC  CRAFFRR V    Y    C      C+I+  + + C+ CRF+KCL SGM+I WV + D        S  K    L      I  S    +  ++   +   ++ + +  C    DF  +  V   Y  +    F  +F++  N F+       Q+++    F+          DL   D ++L + N+ ++  L   V  L   D   + ++    LK  + Q      +   L+   LS+           +S    +  DE + L   L  ++Q W R       D +   L+  +I+F      L+    V  +Q +F+ +LQ+YLK K   +A  K+G  +  ++  + + ++Q++
Sbjct:   52 QSSFNSDLESFLHESNVVSKSPQISDDSEMCKSDVSFKQVSSSVEPEAIKTQLICLVCGNAAGKHCYYGGQVCVSCRAFFRRAVLGKSYSEFKC-SKEEQCVINSKSWKSCRFCRFQKCLQSGMRIAWVTTEDKPSGPSKGSKAKPKGKLIVPTSAIQRSIQLKWTLEEECYVRGFYNHAWENWCHVITDFYARHPV---YFASIISVFLLDFSVENNPFMTKSEFYGQMVNMELSFKRFWFTHPDMNDLCQADQEQLVNENNDLIFTLCRCVQYLNAQDVAKYSRLYRDRLKERASQDESCQNVVAMLSNFTLSDHPEDNITPNTTTSLCLLSADDESKSLESSLMTEIQEWNRLFPHGPCDPIMQTLMGYLIIFDPNMKNLQDYKKVCDIQTKFLHMLQRYLKAKVPKQATKKIGQAVEFITKLRTLSNLQRQ 482

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. nr
Match: gi|1325306415|ref|XP_023334818.1| (oxysterols receptor LXR-alpha-like [Eurytemora affinis])

HSP 1 Score: 100.523 bits (249), Expect = 1.228e-20
Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 0

Query:   42 KICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERK 125
            + C VCG+ AG H+YYGGQVC+ CRAFFRR V     ++  CV+ N NC ++  TR++CQ CR+R C  +GMK +WVL+D E+K
Sbjct:   42 RACKVCGEEAGRHSYYGGQVCASCRAFFRRSVNSGANKAYFCVK-NGNCEVNSKTRKQCQYCRYRLCEDAGMKTSWVLTDTEKK 124

[Close]

BLAST of thyroid hormone receptor alpha 1 vs. nr
Match: gi|657600346|gb|AID52834.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 97.8265 bits (242), Expect = 2.664e-18
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 0

Query:   31 SDGSSSVSSTSKICLVCGDVAGLHNYYGGQVCSGCRAFFRRCVQRDIYQSLGCVEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRR 127
            S GSSS  + +  C VCG+ +G H YYG QVCS CRAFFRR       +   C +A+  C ID  + + C+ CRF+KCL +GM+  WV++D ER +R
Sbjct:  102 SSGSSSCETAAFHCPVCGNPSGKHLYYGAQVCSSCRAFFRRSTINSAAEEFRC-KADKKCGIDSKSWKSCKFCRFQKCLSAGMRPNWVMNDEERTQR 197

The following BLAST results are available for this feature:

BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
BLAST of thyroid hormone receptor alpha 1 vs. nr

BLAST of thyroid hormone receptor alpha 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000011907	2.174e-32	23.98	supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1...	[more]
EMLSAG00000010267	1.361e-31	22.73	supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1...	[more]
EMLSAG00000012651	7.283e-20	48.86	supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 ge...	[more]
EMLSAG00000004174	1.783e-18	42.05	supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-...	[more]
EMLSAG00000009969	2.282e-16	23.57	supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-...	[more]
EMLSAG00000008071	1.456e-15	39.81	supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 ...	[more]
EMLSAG00000008902	1.557e-15	45.45	supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1...	[more]
EMLSAG00000008261	2.446e-15	47.37	supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 ...	[more]
EMLSAG00000013004	1.063e-14	44.94	supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 ...	[more]
EMLSAG00000008543	2.733e-14	45.74	supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1...	[more]

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BLAST of thyroid hormone receptor alpha 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|6094469\|sp\|Q98867.1\|THAA_DANRE	1.462e-17	29.77	RecName: Full=Thyroid hormone receptor alpha-A; Sh...	[more]
gi\|135705\|sp\|P10827.1\|THA_HUMAN	1.467e-17	29.65	RecName: Full=Thyroid hormone receptor alpha; AltN...	[more]
gi\|13124576\|sp\|O97716.1\|THA_PIG	1.980e-17	29.20	RecName: Full=Thyroid hormone receptor alpha; AltN...	[more]
gi\|52001262\|sp\|P63059.1\|THA_RAT	2.226e-17	29.20	RecName: Full=Thyroid hormone receptor alpha; AltN...	[more]
gi\|284018143\|sp\|P63058.2\|THA_MOUSE	2.226e-17	29.20	RecName: Full=Thyroid hormone receptor alpha; AltN...	[more]
gi\|2500920\|sp\|Q28570.1\|THA_SHEEP	2.327e-17	28.47	RecName: Full=Thyroid hormone receptor alpha; AltN...	[more]
gi\|135713\|sp\|P18117.1\|THBA_XENLA	1.382e-16	27.47	RecName: Full=Thyroid hormone receptor beta-A; Sho...	[more]
gi\|1729929\|sp\|Q02965.2\|THB_LITCT	2.645e-16	27.47	RecName: Full=Thyroid hormone receptor beta; AltNa...	[more]
gi\|6094471\|sp\|Q91242.1\|THAB_PAROL	2.864e-16	30.41	RecName: Full=Thyroid hormone receptor alpha-B; Sh...	[more]
gi\|6094470\|sp\|Q91241.1\|THAA_PAROL	3.580e-16	29.17	RecName: Full=Thyroid hormone receptor alpha-A; Sh...	[more]

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BLAST of thyroid hormone receptor alpha 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|657600342\|gb\|AID52832.1\|	9.745e-178	62.17	nuclear receptor [Tigriopus japonicus]	[more]
gi\|657600344\|gb\|AID52833.1\|	3.437e-89	37.74	nuclear receptor [Tigriopus japonicus]	[more]
gi\|657600348\|gb\|AID52835.1\|	9.182e-28	25.85	nuclear receptor [Tigriopus japonicus]	[more]
gi\|657600350\|gb\|AID52836.1\|	8.290e-27	26.51	nuclear receptor [Tigriopus japonicus]	[more]
gi\|657600360\|gb\|AID52841.1\|	2.029e-26	27.81	nuclear receptor [Tigriopus japonicus]	[more]
gi\|728054567\|gb\|AIY67763.1\|	1.172e-24	26.12	HR97a-like receptor 4 [Tigriopus japonicus]	[more]
gi\|1325265241\|ref\|XP_023336689.1\|	5.547e-23	45.79	oxysterols receptor LXR-alpha-like [Eurytemora aff...	[more]
gi\|728054565\|gb\|AIY67762.1\|	7.314e-23	25.52	HR97a-like receptor 6 [Tigriopus japonicus]	[more]
gi\|1325306415\|ref\|XP_023334818.1\|	1.228e-20	52.38	oxysterols receptor LXR-alpha-like [Eurytemora aff...	[more]
gi\|657600346\|gb\|AID52834.1\|	2.664e-18	46.39	nuclear receptor [Tigriopus japonicus]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold28_size608977	supercontig	scaffold28_size608977:174167..181796 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:sequence-specific DNA binding transcription factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold28_size608977-processed-gene-1.5-mRNA-1	snap_masked-scaffold28_size608977-processed-gene-1.5-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold28_size608977:174167..181796+

gene from alignment at scaffold28_size608977:174167..181796+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold28_size608977-processed-gene-1.5 ID=snap_masked-scaffold28_size608977-processed-gene-1.5|Name=thyroid hormone receptor alpha 1|organism=Tigriopus kingsejongensis|type=gene|length=7630bp|location=Sequence derived from alignment at scaffold28_size608977:174167..181796+ (Tigriopus kingsejongensis)
ATGGCTGGCCAAGAAAGGAATTTCATGCAGGAGCTCGAGCACTTCTTGGA
CCAAAACCAAATCACTCAAGGGTCCAGGTCGCATTTGGACTCGGACGGAT
CCTCGTCAGTGTCGTCCACCTCAAAAATTTGCCTCGTTTGTGGAGATGTG
GCTGGTTTGCACAACTACTATGGAGGTCAAGTGTGCTCGGGATGTCGGGC
GTTCTTTCGCCGCTGTGTCCAACGGGATATCTACCAAAGTTTGGGGTGTG
TCGAGGCCAACTCGAACTGCCTCATCGACAAGACAACGCGACGGAGATGC
CAAGGCTGCAGGTTTCGGAAGTGTCTCTTGAGCGGGATGAAGATCACATG
GGTGCTCTCGGATCACGAGCGGAAACGGCGCTATCAGTCGCATGTCAAAA
GCTCCCCGAATCTGCCTCGAGTTCCAGACTTGATCTTGAACTCAGACGAC
ACTACCTACATTTCGGACCAAATGCGCATGATGGATTTCCATTTCCATCA
GAGCATGGACGCCGTCTGCCGTCAAAAGCCCGATTTCATCCGCCAAATGG
CCGTTCTCAGCTACTATGGCGGAAACAGTGACTACCAGTTCTATCAGGAG
TTCAACATCCTTTGCAACGATTTCGTGTTCCAAGTCCTGAGCTCGATCCA
AGAGTTCCGTGATCTGCCTTGGCAGGATTGCCAGGAGCTGTTTTCTGTCA
ACAGCCAAATCATGATTGCTCTCAAACACGCCGTCTCTCTCCAAGAGACG
GATTGGTGCTTCGTTAAGATCATCGAGCGGGCCTTGAAGTCCGGACAATT
TCCCATGCTGAATGAGCTCGGTCATGAGCTGGCTGCCCACGGATTGTCGG
AAAAGAAGCCTCAACTGACCTACAACCAGGTGTTCAGCTCACCCTGGGCC
GCTAATGGCCAGGACGAGGACAGACACCTGTTTCTCACCCAAAAGATGCA
AGGCTGGCCTCGGAAGAAAGACACAGACCGAGTAGATGATGTACAGATGA
ACCTTTTGAAGCTGATCATCCTCTTCTCAACGGAGTTCGTGACACTTGAG
AGAGGGGACATTGTCGAACATGTGCAGATGCGATTCATCCGACTCCTCCA
GAAGTATCTCAAGTTCAAGTACGGATCCGAGGCCGGAGTGAAGCTGGGCA
ATGGACTTCTTATCCTCTCTTACGCCAAAGAGGTCATTGACATTCAGCAG
AGACGTTTGCCAGTCTGAGGGCCAAAAAAACGAAATTCATGCTTTGAGAG
CGATCCGAAGGAAAGCACAAATTACAACCTATTTTCGTTTTGATGTAAAA
TCAGCGACCAGTAAGAAAGGAAGCTAGAAATATTACACCACGTAACCGGA
GACCTTCTGCCACACTCAACCTCTCAAAAACTGAGAGATCGTTTTCAATT
TTTCGAATTCCTTGAATGCTTGTTTTTAATAAATGCGATGGATAGTATCA
GAACTATATACATTCAAGTAACGTTTTTCTTCTGTGATCGTTATTGGTCT
GGACTCCCAATCTGACTCATTTTCAAACGAAAATTTACGGAACAAATTGA
CGCTTTTATTCAATTTTATCATAATTCTTTTTAAGGATACCTATCGGAAA
ACACTCAATGTTTGTCAGGATGGTGACCATAAACATTTTTTCCGTGGTTG
TGAGGCCGCCGTGCGAAAAATCGCCTTGGGACAATTTAGACAATTTTCAG
TAAAATACCATTACTGACAAGGCTCGCCTATAACCAAATTTCACCACGGT
ATTCACAGCCGATTTTGCTACTATGGGGTGGCTTTGACAAAAATCGCTGA
CAAGGCCAGAACCAAGGTCTGAAAACGGTGATGGCTGTCTTTTTGTCTTA
AAGCATTCTCCATTTTGAAACGATATTTTGTAATCTTACTTAATCGTAAT
TTTTGAGAAGATTGAGAAAAGTGAGATCGGAATTTGTGAAAGCGTATTGT
TGTGTCCAAAATGACCAAGAGAACTTTTGACACTTGTTTGTCACAAAGAT
ACAATTTGTTATAACTTGACACCTCTTCGTAGTATCATGGCAGATCACCC
ATCTGTCAAAACTTAGTAGTGCTAGTGCACTCAATCTACTGTAAGGCCTC
TTGTTTGCCGTCAAACAATTTCGCATTTTGTGTACTTATTTGATAAACCA
AGCATTGAAATGTAGAGAGTTCAAAAGTCTGTTGCTCATTTAGAGAAAAT
ATATTTGCCGTTATGTACTGTATGTATTATATTATAAAATGCCCCAACAC
AACTGACTAGCCATTGTTGGCTCAGTGTTGACTCCTGGACATTTACCCAG
TCCAAACACCTATTTCAAAAAAATAATTTAATACATTTCAATATAAATTA
AGATATTTCAAAAGTCTGATTCTCATTCATTGTGGCTTGGTTTACCCAAA
TTAAGTAGGAAATGGAATCAAGTGTCGAATCTCACTCTCCTCTACCCTTC
TTAAGATCGCCATAGGCCCCCTGTAGTAGGTTCGAAAAAAGAGTATTCTG
TCCTCTTGATTCAGTAGTCCTTGGTTACTGCAACCAATATCCCAAAACGG
GATCTGCTCTCTAGGCCTTTAAATGCCGCCGTGTGACACTAAACGTGTAA
AACCCCAACTCATCCAGCCAATGCCACTAAAGGGCAGGGTATTCACTCAC
TGAAATACTGTATATCCCATACATGACTTGATTATTAAATATGTTTGGTG
GGTAAATGCCAAATTGCTGCGAACTAATATACTGTAGATGCTGGTTTCGT
TACTCGTGAAGAACCTACGGGAATGCTTAAAATAATAGACGATAAACACT
GAATCCAAACTCATTCAGCGGTTATAAATCTTGGATACTTTCTTGGCGCG
TGGCAAGCGATTTTTATGGGAAAGATAAAAAAAAAAACAATGTTAAAATA
TTGTCTCAATTTGGAGCTAGCAAGGTACTCTAAACCGAATTATTAAGTAG
GCACACACTCTTGTGCGATATTGTTGCTGTGTATTTAGCGATATTTTAGT
GATTGAAACCAGCACTGTACATAGGGGAGCACAAAACAAGTGACTATTCT
AATTAGGGTTGACACAAATTCGACCATTTATGCCCTGGTACTAACGATTA
TCGAATTCGAGAATCGAAACAAGGTTTCCAATTGCGATTATCGATATTCG
ATAGATTGATCGATATTTTAGACAGAATAAGATTAAGAAAAGTTGCTAAT
TAGGGTTGGTAAGTTTGCAATTTTCATTCTCGCTTTTTCGGAAATTGCAA
TATTTTCCGCTATCCTTATCATTAGTGTGGACTCTCGGACATAAACCTTT
TTTAATATTTAGGAAATGAACGATTACACACATCATTCAAATTGCTCAAT
GCATTCACTTTTGATCATTAGTACCGATCAAAATTTCATTGGTTACAACG
AGGTTTATCAATTACTTCTGTCTTAAGCACTGATCGGAACAACCCTAGTG
CGCACGTAACATGGCGCAGTCGGTATCCTCCTCGGAACTACATTAAAGAT
AGCTGACTGACGTTGAGTGACCAACAGAAAAATCAAAGTGCACTGGATCT
CAATGGACAATGATCGATGGGGCCTTTTTGGATCAATCATTGAGGTTTAA
TGTTATTTTGGGACTCGTATGAAGTCCCTCAACAGGTTTCTATACGCACT
AAAAACTGCCGGTTAGTACATTTTGACTCTCGGGGTATACATGCAATGCT
TGGCATTAGAAGAACATCGAGGGGAAGCGTTTGTGATGAGCAGATTGAAC
ACCAGTGCTTCAAGATTTGGATGGAGGGTTATGTGCCCTAATGTTCCAGG
TGATCACGTCTTGAGATGAACTCGTTCACTCCTCCAAGACCGACAATTAT
TTTCCCATTCTGACTCGAGGAAGTCACTTGTCATTGGGCATCAACAGCCA
TTTTCACTCCTTCACACTTGTCTCTCATCCACTGAGAGGCTTCCACGTTC
TTGGCCGATTGCCATGAATGCGCGATTGAAAGGCCAACCAACAATCAGGC
CCGGTCGTGGGCCTTGAAGTCAATCATGACATGTCAGCTCATCGACATGC
TGGGTCAATGTGGAGCAGGACCATGTCAAATGGCGAGCTTGGCCACGGGG
CTATTCTACACATGTAAGAAGAGGATGTGGCGGAGCTTGGGCGGATTTTT
GTCCGGATCGAGTTACCTGGTCTGGGCAATTTCTCCTCTTCCTGGTGGTC
GATCGTTGCCTTAGTCTTCGAACGCGCACACATGACATGGAGTACCACAC
TAGTACTACAGTACTACGTACATAGCACTGAATACGTGCGAGGGAATCAT
CCTCGGCTGGAGGCAAAGATTGCGAGGCACTGTACATACACAAACGCTTC
CCACTTCTTTCTTGAACCAAGATTTTCCAAAAAGTTCCTACCGTGCAGCG
ACATGACTTCAACTCTGGGGTAAAGTTAAAGGCTCGATTTGTTCTTTGCT
GTGAAAAATATCGGGATAGATGTAGCAAAGCTACAAAATTATGCCAAGAC
TTCAAAAAACGTGTGTTATTTTTTTCCGCTTGCGTCATTAAAAGTACAGT
AGTAATACTGTACTTCACCTATTTTTGACTCAAGACAGTCTGTTTTTGTT
TGTTTGGAAGCCCCCGGACATTTCTGTCCACCTAGGAAATCTCTGTTGAG
ACATAGTCGGCCAGTTTGGCAAATATATCATGATTTAGCCAACAATCGCT
GTGAGTGAACATCAATAGTTGACGTGAACTTGGGTAGCCCGGGATTCGAA
CCCAGACCACTTGCCGACACTGAGCTAAGGCGGCTTCCCTTGACTCAGGA
CCATTGACCAGGCAAAAACTGGCTTTATTGAAAGCTGACCTGCTCAATTG
GCAAAGGTTGGCCAATATGTAGTACAGTGTACATGATTTTTAAAAGCACC
CTGGGTCAAGGAAATTGGTACTTGCAGAACAACAGATGTTCCATATTGCA
AGACATCCTTCACTTGGAACCTGGTTCATTTTCTTCAAGAATGGGTTCCG
AACAGGAAAAAAGTGTTTCGTGAGGACGAAATGATTCATACCTTACCCCA
TCCAAGGATCTTCAAGTTCATGTTGGATGGCGATCGAGGGATCAATATAC
ACATGTGATTTGATTGGGTAGAATAAATCGACTAAGCTCAATCCGCATTA
AGATGAATGTTCCAATGATGTTGTCCGTGTAAATTTGCTTCATGGCTTTG
AAGTATTACACATGATACATGGATACCAAAGCACTCCACGCTGATCAGTA
TTCATGATCAGATCTTTCATATATATTTCAGATTTTGACACCCACGACTA
CTAGGGAACTACAGATGTGTATGTTTTTTTTTTATTGTGCTGAGTGTATA
GGTATATCTGTGCATCGCCAAGGAAATGGATTGAATAATAAATGCATACA
TAAAAAGGAGCTGCCAGGTCCCCACTTAAGCTACAAAACTTTTTTCCCCT
TGGGCCCAAGAGAAAAAATATGTAGGAAAAAGATAAAACACAGATTTTTA
TTTGATATAATGAAAAGAAAGGGATAAAATACGAAAATCGTTGAAAAAAA
AACATTCTTCAATCAAGTCTCTCAGATCATTTTTCGACAGAGAATTAGTT
CGAGGCTGTGTTAGTCGGGCTATTCACAATTATCTTTTCCCTCGGGGAGT
GTAGGTTCGAATCCTACCGACTGCACCATCGGGCTATTCATAATTAAATA
TATTCAGAGCACCAGAAGAGTTGCGACTCCATCGGAGTAGTGCGTATTCG
AATGTTCTCGATTCTTCTTCTCCATCCAGGAGACTCAATCAGTTCCCAGT
CAGAGACGCCAACTACTCCCACAGAGGCGAAGCAGTTCAGTACTGTACGT
TCGCAAAATCAGTTATATTTTTGGGGCGATCGTGACCATTGCCACGCATC
TACAATATGAAACACAATTCATCAAAGGTGGTTGGTGTCCCCTTCAGCCA
TTTGTCCCCTTTTTGCCATTTCAAGTCTAAATCTTGGGTTGATGGCCACA
ATGGAGCTCTTTCTGATTCATCATTTTTGGAGCATATTTTATATTTCTTC
TGTAAAATCAATCTCCAATTTTTTGGGCACATGTGTTCAAAAATAATGGC
CATCCTCACAAAATCGTATGCTTAGGGGAGAGGCTTGTTTGGCAAAATGG
AAGTCTCTATGGTTAACTTTTTCCCAAGTCATCATTATCTATAATCTACG
TGGCAAGGTATAGCTTTTTTGCGACTGTTATCCGTACCTGAGTTCATTTA
ATCGAACAATAAACAATTAAATTATTTCTGTGTTCAATTTTATTTTTCTT
GGTAAAAAACAAACAACAGATAGAAAACATTGCCCTCCCGAGACAATGGA
TCCTTCTTTGCAATTTCAAGTCAATTTTTGGGCCTTTTCTAATTTAAAAT
TATGCAGCATCAGCATCCTTCTAATTCAGCCAATATGGTGCGAACAATGG
CTAATCTGGGACCAGGATTTAGCAAAACTTAGACACATTTGGCTTAATTT
TTTTCCTTGTGTGTTTGTTTGTTTGGTGATGGAACCCTGTATACATGGAA
GAATTACGCTTGCCAGACTTAGGGCCAACGTCAAAGGTGACCAGATTTTC
AAATCGGAAAAACAGATGCATTCAACTCAAAGTTGGTGGTATAAGTAGAT
AATCACGACTAATGCAGCATTAATAGGCGGAACGTGGCCACCCTGACATC
ACTGAGAAGTTCGCAGCGTGCCCAGAGTCAGCAATATTATCTGCCATTTG
TTTTCGTCATTGGAAACTTCGACCAGCTCCAGCTTTTGAATGCTGGATTT
CCAATCTGAAAGTTTGGTCACTTTTGAGTTTGGCCCTAAGTCTGTCAATG
TACAATCGTGAGTAATACTTCCAGATGTACAGGGTTCCGTAGTTTGGAAG
ACCCCGGGCATTTCTGCCCAACTAGGGAAATCTCCGAGGAGACATATATA
GTCAGCATGGTCATGGAGTACTAGAATCACCTGGAGGTCGCACAGAACTT
AAAATGTGTTCAAAGACGGCATGGTTCAGGAAGCTCAAAAGGAGTTAATG
CAATCAATAGTACTCCATGGCCTGGTGGACAAATTGATCATGCATTATAA
CCTTACCCTCGAGGCATGACCACAGGTGCACCCACTTTATTTTTTTTTAA
CCGGGGAAGCCAGCAATAGCTGTGAGTTCACATCAAAGCCCGGGGATCGA
ACCAATGACCCTCGGATACCACAATGATAGATGACTGCTTGTGCTATCAT
TGCTCTACCATTGCGCCACGCTGCTTGCCTAAAAAGGAAAAGTCTGCCTA
TTCATCATTTTGCTGCAAACTGCAGGTCACAATTTGTAACACTATTTGGG
ACTGTAATCCGCAACCCTTCTTTTATTTGTTCTTTTACTCCCTTGAAATC
ATCCAACCTCTTGGGGACGGAACTTATCCAAGTTCTGGGAACGACTCCCC
GACTGGACCCGCAATATGGTTGGGTTGTGAATCAGACTCTCGCACGGTAC
TCTCTCACGTGTGGTTGTACACATATCGCCTTCAGAATTTTGGCCAGCCC
AGCATTGGATGGATGTGTGCGCTCTGGGTCTCCTCAGTGCAGCCCTGGTC
TGCGAGAGTGGAGCGGATTGGTCGCTTTGA

Synonyms

The feature 'thyroid hormone receptor alpha 1' has the following synonyms


Synonym
Tk05738

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