cleavage stimulation factor 50 kda subunit, snap_masked-scaffold403_size186359-processed-gene-0.17 (gene) Tigriopus kingsejongensis

Overview


Name	cleavage stimulation factor 50 kda subunit
Unique Name	snap_masked-scaffold403_size186359-processed-gene-0.17
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000005728 (supercontig:LSalAtl2s:LSalAtl2s309:717547:718847:-1 gene:EMLSAG00000005728 transcript:EMLSAT00000005728 description:"augustus_masked-LSalAtl2s309-processed-gene-7.10")

HSP 1 Score: 481.485 bits (1238), Expect = 1.177e-168
Identity = 234/354 (66.10%), Postives = 281/354 (79.38%), Query Frame = 0

Query:  120 PEF-IPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------IKNSRNEVLGP--GLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQ 464
            PEF I GN++KNR++LYRL+ISQLFYDG+QQ+A+QL   +  +P CPPSE+L  +V+LG+E++ +      +  + N + G   GLDLEFDT++   APEPA YET Y  SHK  CRAGAFS+DG LCATGS DASIK+LDV+RMLAKSN +   +   E  GHPVIRTLYDH+DEVT L+FHPKE ILASGS+D T+KLFD+SK SAKKA +TI DAEPV S++FHP+GDFLLVGC  P+VRLYD NT QCFV S+P   H  E+  VK+S DGK+Y S+S DGSIKIWDG+SS+VI TF  AHDGAEVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAGATG+Q
Sbjct:   15 PEFTIGGNVLKNRDALYRLIISQLFYDGYQQVALQLSGIVGADPPCPPSERLHKVVSLGLEKERNAIXAXKVSAASNGLGGDLYGLDLEFDTEMRXEAPEPALYETXYXXSHKAFCRAGAFSNDGQLCATGSADASIKVLDVDRMLAKSNNDIPVSKQSE--GHPVIRTLYDHVDEVTCLEFHPKETILASGSKDNTIKLFDYSKASAKKACRTIIDAEPVQSLSFHPSGDFLLVGCEHPVVRLYDVNTSQCFVSSIPHQRHTSEVTMVKFSNDGKIYASSSTDGSIKIWDGVSSKVINTFDEAHDGAEVCSVYFTRNGKYILSSGKDSLIKLWELSTSRCLIAYTGAGATGRQ 366

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40")

HSP 1 Score: 93.2041 bits (230), Expect = 1.110e-20
Identity = 69/250 (27.60%), Postives = 116/250 (46.40%), Query Frame = 0

Query:  210 EPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGH--PVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457
             P Y     +  H     A  FS +G   A+ S D  IK+                      G +     +T+  H   ++ + +     +L S S D T+K+++ S     K +K  ++   V    F+P  + ++ G     VR++D  TG+C + ++P+H     + +V ++ DG L VS+S DG  +IWD  S Q + T  + +D   V   +F+ NGKY+L++  D+  KLWE S  +CL  Y+G
Sbjct:   17 RPNYSLKFTLAGHTKGVSAVKFSPNGEWLASSSADKLIKV---------------------WGSYDGKFEKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWELSSGKCLKTLKGHSNY--VFCCNFNPQSNLVVSGSFDESVRIWDVRTGKC-LKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLID-NDNPPVSFVKFSPNGKYILAATLDNTLKLWEYSKGKCLKTYSG 239

HSP 2 Score: 88.1965 bits (217), Expect = 5.129e-19
Identity = 58/241 (24.07%), Postives = 118/241 (48.96%), Query Frame = 0

Query:  219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTI-TDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRN-GKYVLSSGKDSLCKLWELSTTRCLIAYTG 457
            ++ HK      A+SSD  L  + S D ++KI                    E      ++TL  H + V   +F+P+  ++ SGS D +V+++D       K +KT+   ++PV+++ F+  G  ++   +    R++DT +GQC    + + +    +  VK+SP+GK  ++A++D ++K+W+    + + T++   +      A F+   GK+++S  +D++  +W L T   +    G
Sbjct:   68 ISGHKLGISDVAWSSDSRLLVSASDDKTLKIW-------------------ELSSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWD---VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLIDNDN--PPVSFVKFSPNGKYILAATLDNTLKLWEYSKGKCLKTYSGHRNEKYCVFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQG 284

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000006156 (supercontig:LSalAtl2s:LSalAtl2s336:420428:421924:-1 gene:EMLSAG00000006156 transcript:EMLSAT00000006156 description:"augustus_masked-LSalAtl2s336-processed-gene-4.9")

HSP 1 Score: 72.4034 bits (176), Expect = 1.027e-13
Identity = 73/274 (26.64%), Postives = 121/274 (44.16%), Query Frame = 0

Query:  277 IRTLYDHMDEVTALDFHP---------KEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAE----PVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPD-EATTSLCCWDSRNATRKQLLSL-GHNGVVRHIVHSPISPAFLTCSDDFRARFW 535
            IRTL  H   + ++ F+P         K+P +AS S+D +VKL++       ++ + I D E     V+  A+HP+G FL    +    RL+D    Q     +    H + +  + +  DG L ++  +D   +IWD  + Q I        G  +    ++R+G +  +   D+ CK+W+L   +  I YT    T    N    VF+  ED+++    + T  L  W  +  T + L SL GH+  +     SP      TCS D   + W
Sbjct:  239 IRTLRGHSSNIGSIVFNPHATLEGHSNKDPCMASCSQDGSVKLWNL------ESDEPIADIEGHDSRVSRCAYHPSGRFLATCVYDNSWRLWDLEQLQ---EVLHQEGHSKPVHCIAFQNDGSLALTGGLDSFGRIWDLRTGQCIMFLEGHLKG--IIGVDWSRDGYHCATGSSDNACKIWDLRKRK--IEYTIPAHTNVVSN---VVFD--EDYLLTASYDGTAKL--WARK--TWQPLASLKGHDLRLMDCAISPDRSYIATCSYDRTFKLW 490

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000009105 (supercontig:LSalAtl2s:LSalAtl2s573:267932:269786:1 gene:EMLSAG00000009105 transcript:EMLSAT00000009105 description:"maker-LSalAtl2s573-augustus-gene-2.14")

HSP 1 Score: 70.4774 bits (171), Expect = 2.009e-13
Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 0

Query:  277 IRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAF--------HPTGDFLLVGC-HQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVC 421
            I++ Y H +EV ++ + P+   LASGS D T+K++   K S    +K  + A  + +I +        +P  D +LV   +   VRL+D   G C         HQ  + SV +SPDGK   S S D  + IW  ++ +++  +       EVC
Sbjct:  191 IKSFYGHTNEVHSIKWDPQGKFLASGSNDTTLKVWCMDKESHVHDLKAHSKA--IYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWDVERGSCLHTLT---RHQETVSSVAFSPDGKFLASGSYDKFVYIWSTVNGKLVRCYKGTGAIYEVC 339

HSP 2 Score: 51.6026 bits (122), Expect = 2.508e-7
Identity = 63/265 (23.77%), Postives = 106/265 (40.00%), Query Frame = 0

Query:  231 FSSDGTLCATGSVDASIKILDVERMLAKSNIEH---LSNPNHEQGGHPVI-----RT--LYD------------HMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHH---HQREILSVKWS--------PDGKL-YVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGA 460
            ++S G+L ATG  D   +I      L K+  +H   +      + G+ ++     RT  ++D            H   +  +D+   E   AS S+D   K     K   +K +K+       V SI + P G FL  G +   ++++      C       H    H + I ++KWS        P+  L  VSAS D ++++WD      + T     +   V S  F+ +GK++ S   D    +W     + +  Y G GA
Sbjct:   82 WNSSGSLLATGFYDGIARIWSTTGKLEKTLGKHKGPIFGVKWNKSGNYILSASEDRTTIIWDSQTGNHNQQFAFHSAPILDVDWQTDES-FASCSKD---KCIHVCKLGVEKPIKSFYGHTNEVHSIKWDPQGKFLASGSNDTTLKVW------CMDKESHVHDLKAHSKAIYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWDVERGSCLHTLTRHQE--TVSSVAFSPDGKFLASGSYDKFVYIWSTVNGKLVRCYKGTGA 334

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000003976 (supercontig:LSalAtl2s:LSalAtl2s213:19395:20797:-1 gene:EMLSAG00000003976 transcript:EMLSAT00000003976 description:"augustus_masked-LSalAtl2s213-processed-gene-0.0")

HSP 1 Score: 70.8626 bits (172), Expect = 2.143e-13
Identity = 52/204 (25.49%), Postives = 87/204 (42.65%), Query Frame = 0

Query:  278 RTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQC---FVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQF---------------------TRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457
            RTL  H D V  + F     +L S S D ++K++DF      K ++       V+S+ F P GD++L       +++++T TG C   + G      H+  + +V+   DG L  S S D S+++W   S++        HD    C +                        R G ++ S  +D   K+W++ST + L  Y G
Sbjct:  116 RTLKGHTDCVQDIGFDSPGKLLVSCSADMSIKIWDFQTYECLKTLQG--HDHNVSSVCFTPNGDYILSASRDKTIKMWETATGYCVRTYTG------HREWVRNVRVLHDGSLLASCSNDQSVRVW-STSTKDCKDELRDHDHVVECISWAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVSTGQVLFTYVG 310

HSP 2 Score: 68.5514 bits (166), Expect = 1.241e-12
Identity = 64/244 (26.23%), Postives = 103/244 (42.21%), Query Frame = 0

Query:  231 FSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPD----------------------GKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRC 451
            F S G L  + S D SIKI D +                    +  ++TL  H   V+++ F P    + S SRD T+K+++   T+    ++T T   E V ++     G  L    +   VR++ T+T  C    +  H H  E +S  W+P+                      G    S S D +IK+WD  + QV+ T+   HD   V    +   GKY+LS+  D   ++W+++  RC
Sbjct:  130 FDSPGKLLVSCSADMSIKIWDFQ-------------------TYECLKTLQGHDHNVSSVCFTPNGDYILSASRDKTIKMWE---TATGYCVRTYTGHREWVRNVRVLHDGSLLASCSNDQSVRVWSTSTKDC-KDELRDHDHVVECIS--WAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVSTGQVLFTYV-GHDNW-VRGLVWHPGGKYLLSASDDKTIRVWDIAHKRC 346

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000006041 (supercontig:LSalAtl2s:LSalAtl2s327:367648:370815:1 gene:EMLSAG00000006041 transcript:EMLSAT00000006041 description:"maker-LSalAtl2s327-augustus-gene-3.42")

HSP 1 Score: 69.3218 bits (168), Expect = 3.744e-13
Identity = 43/153 (28.10%), Postives = 82/153 (53.59%), Query Frame = 0

Query:  287 VTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDS 439
            + ++ + P    +ASG+ D  + +F  S  + K+       A P+ S+AF      LL G     ++LY+ + G   +G++  H     +LSV++SPD + +VS S D S+K+W+  + Q + TF +  D  +V +A ++ NG+ + +  +D+
Sbjct:  154 ILSIAYSPDGKYIASGATDGIINIF--SMPTGKQXHALEGHALPIRSLAFSKDSKRLLTGSDDGHMKLYEVSHGS-LIGTLSGH--TSWVLSVQFSPDNEXFVSGSSDRSVKVWESTTKQCVHTFTDHSD--QVWAASYSPNGRKIATVSEDA 299

HSP 2 Score: 52.7582 bits (125), Expect = 8.082e-8
Identity = 42/165 (25.45%), Postives = 75/165 (45.45%), Query Frame = 0

Query:  292 FHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYT 456
            F P    L SG+    V ++   +T   K     T  + + SIA+ P G ++  G    I+ ++   TG+          H   I S+ +S D K  ++ S DG +K+++     +I T +     + V S QF+ + +  +S   D   K+WE +T +C+  +T
Sbjct:  116 FSPDSETLISGANAGKVNIY-CVETGQNKQQLLDTRGKFILSIAYSPDGKYIASGATDGIINIFSMPTGK---QXHALEGHALPIRSLAFSKDSKRLLTGSDDGHMKLYEVSHGSLIGTLSG--HTSWVLSVQFSPDNEXFVSGSSDRSVKVWESTTKQCVHTFT 274

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000000276 (supercontig:LSalAtl2s:LSalAtl2s1041:88294:89557:1 gene:EMLSAG00000000276 transcript:EMLSAT00000000276 description:"augustus_masked-LSalAtl2s1041-processed-gene-0.10")

HSP 1 Score: 67.781 bits (164), Expect = 1.166e-12
Identity = 49/187 (26.20%), Postives = 89/187 (47.59%), Query Frame = 0

Query:  266 NPNHEQGGHPVIRTLYDHMDEVTALDFHPK-EPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSV-----KWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWEL 446
            N + EQ    ++  L  H  +++ + +HP  +  + + S D TV+++    +   K ++ I D  PVT ++ H TGD++L           D  +G+                SV     ++ PDG ++ + + D  IKIWD    Q +A F   H+G+ + +  F+ NG Y+ ++  D+  KLW+L
Sbjct:   48 NKDTEQ----IVANLKGHSKKISRVIYHPSSDDTVITASHDTTVRVWHVPSSQTLKILR-IHDG-PVTGLSLHATGDYILSTSTDRYWAFTDLRSGRLITKVTADSSAGGASSSVALTCAQFHPDGLIFGTGTSDSEIKIWDLKEQQNVANFP-GHNGS-ITALSFSENGYYLATAADDACVKLWDL 226

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000007279 (supercontig:LSalAtl2s:LSalAtl2s409:120750:123834:-1 gene:EMLSAG00000007279 transcript:EMLSAT00000007279 description:"augustus_masked-LSalAtl2s409-processed-gene-1.3")

HSP 1 Score: 68.1662 bits (165), Expect = 3.244e-12
Identity = 49/200 (24.50%), Postives = 93/200 (46.50%), Query Frame = 0

Query:  279 TLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFH----------PTGDFLLVGCHQPIVRLY-----DTNTGQCFVGSVPSHH---HQREILSVKWSPDGKLYVSASMDGSIKIWDGISS-QVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAG 459
            TL  H D V AL FHPKEP+L + S D T+K+++  KT+  K   T  D EPV +   H            GD +  G     +R++     D +    +  SV +     H   +  + ++   +  +S S DG++K+W  ++   ++ TF + ++G          +  Y++++  ++ C ++++ T + +I     G
Sbjct:  395 TLRSHYDGVRALRFHPKEPVLITASEDQTLKMWNLQKTTPVKK-STAFDVEPVYTFRAHRGPVLSLDVSRAGDLIFSGGIDASIRVWNMPSPDIDPYNLYDPSVLASSLFGHSDAVWGLAYNNLKQQLLSCSADGTVKLWSPLAKVPLLRTFGSENNGTPTSVDWMYEDPSYMITAYSNAACIIYDVETGKPVIKLDTQG 593

HSP 2 Score: 54.6842 bits (130), Expect = 4.354e-8
Identity = 59/251 (23.51%), Postives = 105/251 (41.83%), Query Frame = 0

Query:  210 EPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIE--HLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFD-FSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457
            EP Y   A    H+G   +   S  G L  +G +DASI++ +    +   +I+  +L +P+       +  +L+ H D V  L ++  +  L S S D TVKL+   +K    +   +  +  P +    +    +++         +YD  TG+  +      +    I  V   P   + V+A  D  I+ +D  + ++  +   AH  A V S     NG Y++S   D   +LW + T  C+   T 
Sbjct:  444 EPVYTFRA----HRGPVLSLDVSRAGDLIFSGGIDASIRVWN----MPSPDIDPYNLYDPS------VLASSLFGHSDAVWGLAYNNLKQQLLSCSADGTVKLWSPLAKVPLLRTFGSENNGTPTSVDWMYEDPSYMITAYSNAACIIYDVETGKPVIKLDTQGNDVGAITRVACHPTLPMTVTAHDDRHIRFFDNYTGKLTHSMV-AHLEA-VTSIAIDANGLYLISGSHDRSVRLWNIETKTCVQEITA 678

HSP 3 Score: 51.2174 bits (121), Expect = 6.259e-7
Identity = 37/134 (27.61%), Postives = 59/134 (44.03%), Query Frame = 0

Query:  271 QGGHPVIR--TLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQ--REILSVKWSPDGKLYVSASMDGSIKIW 400
            + G PVI+  T  + +  +T +  HP  P+  +   D  ++ FD    + K     +   E VTSIA    G +L+ G H   VRL++  T  C V  + +H  +    I  V + P      SA  D   K++
Sbjct:  581 ETGKPVIKLDTQGNDVGAITRVACHPTLPMTVTAHDDRHIRFFD--NYTGKLTHSMVAHLEAVTSIAIDANGLYLISGSHDRSVRLWNIETKTC-VQEITAHRKKFDESIFDVAFHPSSSYIASAGADALAKVF 711

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000008384 (supercontig:LSalAtl2s:LSalAtl2s512:319189:321924:1 gene:EMLSAG00000008384 transcript:EMLSAT00000008384 description:"maker-LSalAtl2s512-augustus-gene-3.19")

HSP 1 Score: 65.4698 bits (158), Expect = 8.116e-12
Identity = 58/228 (25.44%), Postives = 101/228 (44.30%), Query Frame = 0

Query:  222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEP----VTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWE 445
            H+G  R+  F+SDG+   + S D SIK+  VE+                      I++   H + V +  +   +  +AS S D ++KLFD    +  K + +    EP       ++FHP+G  + +G     V++YD  T +          H   +  V + P G   +S S DG +K++D I +Q +       +  EV + +F+  G+Y  S G D+   +W+
Sbjct:   29 HQGPVRSVDFNSDGSKXLSASDDKSIKLWTVEK-------------------QRFIKSFNGHNNWVRSAKWSXBQKXIASVSDDRSLKLFD---ENTGKEIHSFN--EPGRGFGQCLSFHPSGSCIAIGTSDKKVKMYDIRTMKLHQSYTS---HTGPVNQVAFHPSGCYLLSCSSDGFVKMFDIIEAQPVYGLTGHKE--EVTAIEFSPKGEYFSSGGSDNAVFVWK 227

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000011537 (supercontig:LSalAtl2s:LSalAtl2s799:381305:384324:1 gene:EMLSAG00000011537 transcript:EMLSAT00000011537 description:"maker-LSalAtl2s799-snap-gene-3.77")

HSP 1 Score: 65.4698 bits (158), Expect = 1.321e-11
Identity = 46/171 (26.90%), Postives = 78/171 (45.61%), Query Frame = 0

Query:  277 IRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAF--------HPTGDFLLVGCH-QPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKD 438
            I++ Y H +EV A+ + P+   LAS S D T+K++   K S    ++    ++ + +I +        +P  D +L        VRL+D   G C         H+  + SV +SPDGK   S S D  + IW  ++ +++ ++       EVC   +   G  V +S  D
Sbjct:  309 IKSFYGHTNEVNAIKWDPQGKFLASCSDDMTLKVWCMDKESHVHDLQA--HSKEIYTIKWSCTGPGTNNPNADLVLASASFDSTVRLWDVERGSCLHXLX---RHKEPVYSVAFSPDGKFLASGSFDKCVHIWSTVTGKLVHSYKGTGGIFEVC---WNSRGDKVGASASD 471

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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|67460105|sp|Q5BJQ6.1|CSTF1_RAT (RecName: Full=Cleavage stimulation factor subunit 1; AltName: Full=Cleavage stimulation factor 50 kDa subunit; Short=CSTF 50 kDa subunit; Short=CstF-50 >gi|67460583|sp|Q99LC2.1|CSTF1_MOUSE RecName: Full=Cleavage stimulation factor subunit 1; AltName: Full=CF-1 50 kDa subunit; AltName: Full=Cleavage stimulation factor 50 kDa subunit; Short=CSTF 50 kDa subunit; Short=CstF-50)

HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0
Identity = 254/420 (60.48%), Postives = 314/420 (74.76%), Query Frame = 0

Query:  128 IKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERD-TDIKNS--RNEVLGPG--LDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSN--IEHLSNPNHEQG--GHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            +K+R+ LY+L+ISQL YDG+  IA  L N I+P+  C PSE+L HL+ LGME D T ++ +  R++ + PG  +DLEFD D+ + +PE + YET YVTSHKG CR   +S DG L ATGS DASIKILD ERMLAKS   IE + N   +Q    HPVIRTLYDH+DEVT L FHP E ILASGSRD+T+KLFD+SK SAK+A K I +AE + SI+FHP+GDF+LVG   P +RLYD NT QCFV   P   H   I SV ++P   +YV+ S DG IK+WDG+S++ I TF  AHDGAEVCSA F++N KY+LSSGKDS+ KLWE+ST R L+ YTGAG +G+Q +R QAVFNHTED+++ PDE T SLCCWDSR A R+ LLSLGHN +VR IVHSP +P F+TCSDDFRARFWY+R
Sbjct:    8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYILLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRR 427

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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|461848|sp|Q05048.1|CSTF1_HUMAN (RecName: Full=Cleavage stimulation factor subunit 1; AltName: Full=CF-1 50 kDa subunit; AltName: Full=Cleavage stimulation factor 50 kDa subunit; Short=CSTF 50 kDa subunit; Short=CstF-50)

HSP 1 Score: 529.25 bits (1362), Expect = 0.000e+0
Identity = 254/420 (60.48%), Postives = 313/420 (74.52%), Query Frame = 0

Query:  128 IKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERD-TDIKNS--RNEVLGPG--LDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSN--IEHLSNPNHEQG--GHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            +K+R+ LY+L+ISQL YDG+  IA  L N I+P+  C PSE+L HL+ LGME D T ++ +  R++ + PG  +DLEFD D+ + +PE + YET YVTSHKG CR   +S DG L ATGS DASIKILD ERMLAKS   IE + N   +Q    HPVIRTLYDH+DEVT L FHP E ILASGSRD+T+KLFD+SK SAK+A K I +AE + SI+FHP+GDF+LVG   P +RLYD NT QCFV   P   H   I SV ++    +YV+ S DG IK+WDG+S++ I TF  AHDGAEVCSA F++N KY+LSSGKDS+ KLWE+ST R L+ YTGAG +G+Q +R QAVFNHTED+V+ PDE T SLCCWDSR A R+ LLSLGHN +VR IVHSP +P F+TCSDDFRARFWY+R
Sbjct:    8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRR 427

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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|67460449|sp|Q5R8K2.1|CSTF1_PONAB (RecName: Full=Cleavage stimulation factor subunit 1; AltName: Full=Cleavage stimulation factor 50 kDa subunit; Short=CSTF 50 kDa subunit; Short=CstF-50)

HSP 1 Score: 528.48 bits (1360), Expect = 0.000e+0
Identity = 254/420 (60.48%), Postives = 313/420 (74.52%), Query Frame = 0

Query:  128 IKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERD-TDIKNS--RNEVLGPG--LDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSN--IEHLSNPNHEQG--GHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            +K+R+ LY+L+ISQL YDG+  IA  L N I+P+  C PSE+L HL+ LGME D T ++ +  R++ + PG  +DLEFD D+ + +PE + YET YVTSHKG CR   +S DG L ATGS DASIKILD ERMLAKS   IE + N   +Q    HPVIRTLYDH+DEVT L FHP E ILASGSRD+T+KLFD+SK SAK+A K I +AE + SI+FHP+GDF+LVG   P +RLYD NT QCFV   P   H   I SV ++    +YV+ S DG IK+WDG+S++ I TF  AHDGAEVCSA F++N KY+LSSGKDS+ KLWE+ST R L+ YTGAG +G+Q +R QAVFNHTED+V+ PDE T SLCCWDSR A R+ LLSLGHN +VR IVHSP +P F+TCSDDFRARFWY+R
Sbjct:    8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHADAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISLCCWDSRIAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRR 427

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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|75329664|sp|Q8L4J2.1|CTF50_ARATH (RecName: Full=Cleavage stimulation factor subunit 50; Short=AtCstF-50; Short=AtCstF50; AltName: Full=CF-1 50 kDa subunit; AltName: Full=Cleavage stimulation factor 50 kDa subunit; Short=CSTF 50 kDa subunit)

HSP 1 Score: 268.855 bits (686), Expect = 2.132e-83
Identity = 161/440 (36.59%), Postives = 238/440 (54.09%), Query Frame = 0

Query:  112 LGGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNA-IQPEPACPPSEKLFHLVNLGMERDTD-----------IKNSRNEVLGP---GLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGS-VPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535
            +G + D       GNI +    L  L+++ L +    Q+A  + +A + P     P  +L  LV  G+  + +           + +S   +  P    +D   +    SS   P + E+  ++ HK   R   FS DG   ATG  D SIK+ +V ++  K  I      + +    P+IRT YDH + +  LDFHP+  IL S ++D  +K FDFSKT+AK+A K   D   V SI+FHP+G+FLL G   PI  LYD NT QCF+ S  P       I  V++S  G +Y++AS DG+I+++DG+S++ + +  NAH  +EV SA FT++ ++VLSSGKDS  KLWE+ + R +  Y GA    + + R+QA+FN TE+FV+  DEA+  +  WD+R A +       HNG  R I HSP+   F+TC  D   RFW
Sbjct:    1 MGNSGDLEQALQDGNIFRQ---LNALIVAHLRHHNLSQVASAVASATMTPLNIEVPPNRLLELVAKGLAAENNGTLRGVSSSVLLPSSYGSITTPRTASIDFSVNHAKGSSKTIPKH-ESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKV--KQMI------SGDTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGA---KRVKLRSQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 425

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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|20140995|sp|Q8YTC2.1|Y2800_NOSS1 (RecName: Full=Uncharacterized WD repeat-containing protein alr2800)

HSP 1 Score: 108.227 bits (269), Expect = 2.505e-23
Identity = 85/313 (27.16%), Postives = 131/313 (41.85%), Query Frame = 0

Query:  230 AFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEAT-------TSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535
            AFS D  + A+GS D ++K+ D                   Q G   I +L  H D +  + F P    LAS S D +V+L++ S     + +   TD   V ++ FHP G  +  G     V+L++ +TGQC         H  +IL + WSPDG+L  SAS D S+++WD  + + +       +   V SA F+ NG+ + +   D   K+W+    +CL   TG               N   D    PD           ++  WD  N  +   + +GH  +V  +  SP      + S D   R W
Sbjct:  943 AFSPDRQILASGSNDKTVKLWD------------------WQTG-KYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDW--VYAVVFHPQGKIIATGSADCTVKLWNISTGQCLK---TLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSN--RVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHT-------------NWVFDIAFSPDGKILASASHDQTVRIWDV-NTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIW 1215

HSP 2 Score: 106.301 bits (264), Expect = 1.030e-22
Identity = 91/318 (28.62%), Postives = 142/318 (44.65%), Query Frame = 0

Query:  219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSL-GHNGVVRHIVHSPISPAFLTCSDDFRARFW 535
            +T H+    + AF  DG   A+ S D +IK+ D+                  Q G   ++TL  H D V  + F P    LAS + D T+KL+D S+    + +K+ T    V S+AF   G  L  G     +++++ +TG+C    +    H   + S+ +SPD K+ VS S D +IK+WD  +   I T  + H   EVCS  F+ +G+ +     D   +LW   T +CL A+ G        + A  V    +  ++       ++  WD +  T K + SL GH   +  I  SP S    + S D   R W
Sbjct:  722 LTGHEHEVFSVAFHPDGETLASASGDKTIKLWDI------------------QDG-TCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGW--VRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIG---HTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTL-HGHTN-EVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYG------NTDWALPVAFSPDRQILASGSNDKTVKLWDWQ--TGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLW 1005

HSP 3 Score: 89.3521 bits (220), Expect = 2.874e-17
Identity = 87/328 (26.52%), Postives = 131/328 (39.94%), Query Frame = 0

Query:  219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFV----MFPDEAT-------TSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535
            +T H    R  AFS DG   A+ + D +IK+ DV                  QG    +RTL  H   V ++ F      LASGS D T+K++++      K    I     V SIA+ P    L+ G     ++L+D  T  C       H H  E+ SV +SPDG+     S+D S+++W+  + Q +  +    D A      F+ + + + S   D   KLW+  T + + +  G                HT DF+      PD  T       +S+  W+       Q+L L H   V  +V  P      T S D   + W
Sbjct:  764 LTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVS-----------------QG--KCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTY--IGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIK---TLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWA--LPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEG----------------HT-DFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQIL-LEHTDWVYAVVFHPQGKIIATGSADCTVKLW 1047

HSP 4 Score: 83.5741 bits (205), Expect = 1.706e-15
Identity = 66/264 (25.00%), Postives = 116/264 (43.94%), Query Frame = 0

Query:  230 AFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITD-AEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATF--------------------ANAHDGA------------EVC--------SAQFTRNGKYVLSSGKDSLCKLWELSTTRCL 452
            AFS D    A+ S D+S+++ ++                         + L +H D V A+ FHP+  I+A+GS D TVKL++ S     + +KT+++ ++ +  +A+ P G  L        VRL+D  TG+C VG +  H ++  + S  +SP+G++  + S D ++KIWD    + + T                     + +HD               +C        S  F+ +G+ V S  +D   ++W + T  CL
Sbjct:  985 AFSPDSQTLASASTDSSVRLWNIST-------------------GQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNIS---TGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRC-VGILRGHSNR--VYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECL 1223

HSP 5 Score: 61.6178 bits (148), Expect = 1.119e-8
Identity = 42/142 (29.58%), Postives = 65/142 (45.77%), Query Frame = 0

Query:  222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCF 363
            H     +  FS +G + AT S D ++KI D                  +QG    ++TL  H + V  + F P   ILAS S D TV+++D +  + K     I     V+S+AF P G+ +  G     VR+++  TG+C 
Sbjct: 1103 HSNRVYSAIFSPNGEIIATCSTDQTVKIWD-----------------WQQG--KCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVN--TGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECL 1223

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|74996742|sp|Q54KL5.1|WDR5_DICDI (RecName: Full=WD repeat-containing protein 5 homolog)

HSP 1 Score: 102.064 bits (253), Expect = 1.435e-22
Identity = 73/255 (28.63%), Postives = 119/255 (46.67%), Query Frame = 0

Query:  207 SAPE-PAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGH--PVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTT-RCLIAYTG 457
            S P+ P Y     +  H  +  +  FS DG   A+ S D +IKI                      G +     RTL  H + ++ + +     ++ S S D T+K++D       K +K     E V  ++F+P  + ++ G     VR++D NTG+C   +     H   +  V ++ DG L VS S DG+++IWD  + Q++ T +   DG EV   +F+ NGK+VL+   D+  +LW  +   +CL  YTG
Sbjct:   29 SIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIW---------------------GAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLK--GHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGEC---TKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIS-TEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTG 256

HSP 2 Score: 89.7373 bits (221), Expect = 2.338e-18
Identity = 61/238 (25.63%), Postives = 112/238 (47.06%), Query Frame = 0

Query:  222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVC--SAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457
            HK      A+S D  L  + S D +IKI DVE                      +++TL  H + V  + F+P+  ++ SGS D  V+++D +     K +   +D  PVT + F+  G  ++ G +   VR++DT TGQ    +  S    +E+  VK+SP+GK  ++ ++D ++++W   +++        H   + C  S      GK++++  +D+L  ++ L T   +    G
Sbjct:   87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVE-------------------SGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSD--PVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLL--NTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAG 301

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|75335857|sp|Q9M2Z2.1|WDR5A_ARATH (RecName: Full=COMPASS-like H3K4 histone methylase component WDR5A; Short=AtWDR5A)

HSP 1 Score: 99.3673 bits (246), Expect = 9.594e-22
Identity = 82/336 (24.40%), Postives = 147/336 (43.75%), Query Frame = 0

Query:  203 DLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            ++P++A    Y  +  +TSH     +  FSSDG L A+ S D +I+   +  +      + ++ P  E  GH          + ++ + F      + S S D T+KL+D    S  K +  I        + F+P  + ++ G     VR++D  TG+C +  +P+H     + +V ++ DG L VS+S DG  +IWD  +   + T  +  +   V   +F+ NGK++L    D+  +LW +S+ + L  YTG       +    + F+ T    +        +  W+  +    Q L  GH   V ++   P      + S D   R W ++
Sbjct:    4 EIPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTIN-----DPIAEPVQEFTGHE---------NGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTL--IGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKC-LKVLPAH--SDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLID-DENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH---VNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLE-GHTETVMNVACHPTENLIASGSLDKTVRIWTQK 315

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|3123159|sp|Q17963.1|WDR51_CAEEL (RecName: Full=WD repeat-containing protein wdr-5.1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.661e-21
Identity = 70/251 (27.89%), Postives = 113/251 (45.02%), Query Frame = 0

Query:  222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVF 472
            H  +  +  FS  G    T S D ++KI +++ M+ +                   RTL  H   V  + +      + S S D T+K+F+   +   K +K   +   V    F+P    ++ G     VR++D  TG C + ++P+H     + +V ++ DG L  S S DG ++IWD  + Q I T  +  +   V   +F+ NGKY+L+S  DS  KLW+ S  + L  YTG       EN    +F
Sbjct:   86 HTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICE-------------------RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNY--VFCCNFNPQSSLVVSGSFDESVRIWDVKTGMC-IKTLPAH--SDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD-DENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTG------HENSKYCIF 305

HSP 2 Score: 90.1225 bits (222), Expect = 2.594e-18
Identity = 64/245 (26.12%), Postives = 119/245 (48.57%), Query Frame = 0

Query:  219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDV--ERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCS-AQFT-RNGKYVLSSGKDSLCKLWELST---TRCLIAYT 456
            +T HK      A+SSD     + S D ++KI ++   RM                      +TL  H + V   +F+P+  ++ SGS D +V+++D       K +   +D  PV++++F+  G  +  G +  +VR++DT  GQC    V        +  VK+SP+GK  +++++D ++K+WD    + +  +   H+ ++ C  A F+   GK+++S  +D    +W L T    +CL  +T
Sbjct:  125 LTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRM---------------------TKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSD--PVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLV--DDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT-GHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHT 343

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|20532311|sp|Q8YRI1.1|YY46_NOSS1 (RecName: Full=Uncharacterized WD repeat-containing protein alr3466)

HSP 1 Score: 100.908 bits (250), Expect = 6.555e-21
Identity = 101/374 (27.01%), Postives = 153/374 (40.91%), Query Frame = 0

Query:  222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVE---------------RMLAKS-NIEHLSNPNHEQ-------GGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG-----------------AGATGKQENRAQAV---------FNHTE---DFVMFPDEAT-------TSLCCWDSRNATRKQLLSL-GHNGVVRHIVHSPISPAFLTCSDDFRARFW 535
            H    R+  FS DG + A+G  D  +++ D+                R L  S N   L+N + +Q            + TL  H + V A+ F P    LASGS D TV+L+D S +     ++  T    V S+ F+P G  L  G     VRL++ N+ +C         H   + SV ++PDG +  S S D ++++WD  SS+ + TF    +   V S  F  +G  + S   D   +LWE+S+++CL  + G                 A  +  Q  R  ++           HT      +  PD A         ++  W   +   K L +L GHN  V  IV SP      + SDD   R W
Sbjct: 1073 HTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSW--VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLC---TFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNW--VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSG--KCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLW 1437

HSP 2 Score: 95.9005 bits (237), Expect = 2.036e-19
Identity = 88/322 (27.33%), Postives = 135/322 (41.93%), Query Frame = 0

Query:  222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTS-------LCCWDSRNATRKQLLSL-GHNGVVRHIVHSPISPAFLTCSDDFRARFW 535
            H     +  FS DG + A+GS D ++++ D+                        ++T   H   V ++ F P   +LASGS D TV+L+D S        +  T    V S+AF+  G  L  G     VRL+D ++ QCF        H   + SV +S DG +  S S D ++++WD  S   + T    H    V S  F+ +G  + S G D + +LW++S+  CL  YT  G T           +     V  P+  T +       +  WD   +++K L +L GH   V  +  SP      + S D   R W
Sbjct:  905 HNSWVNSVGFSQDGKMLASGSDDQTVRLWDI-------------------SSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGW--VYSVAFNLDGSMLATGSGDQTVRLWDISSSQCF---YIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTL-QGHTSC-VRSVVFSPDGAMLASGGDDQIVRLWDISSGNCL--YTLQGYT-----------SWVRFLVFSPNGVTLANGSSDQIVRLWDI--SSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLW 1185

HSP 3 Score: 83.9593 bits (206), Expect = 1.417e-15
Identity = 88/319 (27.59%), Postives = 126/319 (39.50%), Query Frame = 0

Query:  224 GNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTS-------LCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535
            G+    AFS DG L ATG     ++  +     A +  E L+   H                 V ++ F     +LASGS D TV+L+D S     K  K  T    V S+ F P    L  G     VRL+D ++G+C         H   + SV ++ DG +  + S D ++++WD  SSQ    F   H    V S  F+ +G  + S   D   +LW++S+  CL  YT  G T           +     V  PD A  +       +  WD  +      L  G+   VR +V SP        S D   R W
Sbjct:  865 GSVLTVAFSPDGKLFATGDSGGIVRFWE-----AATGKELLTCKGHNSW--------------VNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHT--SRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECL---YIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIF-QGHTSC-VRSVVFSSDGAMLASGSDDQTVRLWDISSGNCL--YTLQGHT-----------SCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQ-GYTSWVRFLVFSPNGVTLANGSSDQIVRLW 1143

HSP 4 Score: 82.8037 bits (203), Expect = 2.842e-15
Identity = 62/231 (26.84%), Postives = 105/231 (45.45%), Query Frame = 0

Query:  222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCL 452
            H     + AF+ DG++ A+GS D ++++ ++                        + T   H   V+++ F P   +LASGS D TV+L+  S  S +     +     V S+ F P G  L  G     VRL+  ++G+C         H   + S+ +SPDG L  S S D ++++W+  S + + T  + H  + V S  F+ +G  + S   D   KLW++ T  C+
Sbjct: 1283 HTNWVNSVAFNPDGSMLASGSGDQTVRLWEI-------------------SSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSIS--SGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLY---TLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTL-HGHINS-VRSVAFSSDGLILASGSDDETIKLWDVKTGECI 1487

HSP 5 Score: 76.2554 bits (186), Expect = 3.784e-13
Identity = 59/206 (28.64%), Postives = 93/206 (45.15%), Query Frame = 0

Query:  222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFAN--AHDGAEVCSAQ 424
            H     +  FS DGT+ A+GS D ++++  +                        + T   H + V ++ F P   ILASGS D TV+L+  S   + K + T+      V SI F P G  L  G     VRL++ ++G+C       H H   + SV +S DG +  S S D +IK+WD  + + I T  +   ++G  + S +
Sbjct: 1325 HTSWVSSVTFSPDGTMLASGSDDQTVRLWSI-------------------SSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSIS---SGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLY---TLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLKSEKIYEGMNITSVR 1505

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|322518324|sp|B6GZD3.1|LIS12_PENCW (RecName: Full=Nuclear distribution protein nudF 2; AltName: Full=Lissencephaly-1 homolog 2; Short=LIS-1 2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.026e-20
Identity = 80/282 (28.37%), Postives = 128/282 (45.39%), Query Frame = 0

Query:  274 HPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGD-FLLVGCHQPI-VRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAV-------FNHTEDFV-----MFPDEATT------SLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535
            HP IR+L  H D +  + FHPK  ++ASGS D T++++D+  ++ ++ +K  T A  V  + +  T    LL  C     ++L+DT      V ++  H H   + +V++ P G L  SAS D  + +W+ I+   + T  +        S  F  +G+++LS+G D   +LWE+S ++ +  +T  G     ENR           F +   F+         E T       S+  WDS    R  +   GH   VR I   P     L+ SDD   R W
Sbjct:  105 HP-IRSLESHRDSINCIAFHPKYSLIASGSGDLTIRIWDWEDSTLERTLKGHTMA--VCDVDYGDTSSGILLASCSSDFTIKLWDTTDDYKNVKTLRGHDHI--VSAVRFIPSGNLLASASRDMKVILWNVINGYRVKTIEDHTGWVRDISPSF--DGQFLLSTGDDMTVRLWEISASQPICKFTATG----HENRILCCAVAPATSFRYLASFLESRGSTIAAEITATGSRDKSIKLWDSHG--RCIMTLTGHASWVRAIAFHPGGKYLLSVSDDKTMRCW 373

HSP 2 Score: 63.929 bits (154), Expect = 1.445e-9
Identity = 80/315 (25.40%), Postives = 133/315 (42.22%), Query Frame = 0

Query:  219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEP--ILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTS-IAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATF-ANAHDGAEVCSA-----QFTRNGKYVLSSG------------KDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWD-SRNATRKQLLSLGHNGVV 511
            + SH+ +    AF    +L A+GS D +I+I D E     S +E               RTL  H   V  +D+       +LAS S DFT+KL+D   T   K +KT+   + + S + F P+G+ L        V L++   G   V ++  H     +  +  S DG+  +S   D ++++W+  +SQ I  F A  H+   +C A      F     ++ S G            +D   KLW+ S  RC++  TG        +  +A+  H     +       ++ CWD S+     + +S  H+G +
Sbjct:  110 LESHRDSINCIAFHPKYSLIASGSGDLTIRIWDWE----DSTLE---------------RTLKGHTMAVCDVDYGDTSSGILLASCSSDFTIKLWD--TTDDYKNVKTLRGHDHIVSAVRFIPSGNLLASASRDMKVILWNVINGY-RVKTIEDHTGW--VRDISPSFDGQFLLSTGDDMTVRLWEISASQPICKFTATGHENRILCCAVAPATSFRYLASFLESRGSTIAAEITATGSRDKSIKLWD-SHGRCIMTLTG------HASWVRAIAFHPGGKYLLSVSDDKTMRCWDLSQQGRCVKSISNAHDGFI 393

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|795053941|ref|XP_011871011.1| (PREDICTED: cleavage stimulation factor subunit 1 isoform X2 [Vollenhovia emeryi])

HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0
Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P N+IK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G   + D              +S +  LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS  E ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+SS+ + TFA AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    4 PEADPKNMIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGAAHEPDRAKKDSSANLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIT-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSSRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|815799842|ref|XP_012220564.1| (PREDICTED: cleavage stimulation factor subunit 1 [Linepithema humile])

HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0
Identity = 304/431 (70.53%), Postives = 352/431 (81.67%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGM--ERDTDIKNSRNEV----------LGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G   E D   K++ N +          LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS  + ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+SS+ I TF  AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    4 PEVDPKNIIKSREQLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKDTSNSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSSRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 433

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|751218509|ref|XP_011162294.1| (PREDICTED: cleavage stimulation factor subunit 1 [Solenopsis invicta])

HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0
Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G   + D              +S +  LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS  E ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ + TFA AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    4 PEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNVIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKDNSTSISTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|951565066|ref|XP_014481393.1| (PREDICTED: cleavage stimulation factor subunit 1 [Dinoponera quadriceps])

HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0
Identity = 305/437 (69.79%), Postives = 352/437 (80.55%), Query Frame = 0

Query:  113 GGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGM--ERDTDIKNSRN---------EVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            G N    PE  P NIIK+RE LYRLMISQLFYDGHQ +AVQL N +Q EP CPPS++L HL+ +G   E D   K S N           LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS  + ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ I TF  AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    3 GQNATKEPEVDPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMMQAEPPCPPSDRLLHLMLIGAAHEPDRSKKESNNVSTFASSFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 438

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|826453264|ref|XP_012532678.1| (PREDICTED: cleavage stimulation factor subunit 1 isoform X1 [Monomorium pharaonis])

HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0
Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P N+IK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G   + D              +S +  LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS  E ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + PIVRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ + TFA AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    4 PEADPKNVIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSTSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPIVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|769832588|ref|XP_011643192.1| (PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1 [Pogonomyrmex barbatus])

HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0
Identity = 306/449 (68.15%), Postives = 357/449 (79.51%), Query Frame = 0

Query:  102 PAGTQANATTLGGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            P+   AN +T+       PE  P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G   + D              +S +  LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS  E ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ I TFA AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+S NA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:   48 PSKNTANQSTM-----KEPEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSSNLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSXNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 490

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|1153833364|ref|XP_020293282.1| (cleavage stimulation factor subunit 1 isoform X1 [Pseudomyrmex gracilis])

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 300/438 (68.49%), Postives = 351/438 (80.14%), Query Frame = 0

Query:  112 LGGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIKNSRN-----------EVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            +  N    PE  P NIIK+RE+LYRLMISQLFYDGHQ +A+QL N IQ EP CPPS++L HL+ +G   + D     N             LGPGLDLEF+T++ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS  + +  P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGD+L+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ I TF  AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    1 MSNNATKEPEVDPKNIIKSRETLYRLMISQLFYDGHQTLAMQLSNVIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKENTSLSTFASSFDNTLGPGLDLEFETEIQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEVP-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDYLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHSNGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 437

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|225719552|gb|ACO15622.1| (Cleavage stimulation factor 50 kDa subunit [Caligus clemensi])

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 303/430 (70.47%), Postives = 351/430 (81.63%), Query Frame = 0

Query:  120 PEF-IPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIK----------NSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PEF + GN++KNRE+LYRLMISQLFYDGHQQ+A+QL   +  EPACPPSE+L  +V LGME++ +            N+ N +    LDLEFDT++ S APEPA YETAYVTSHK  CRAGAFSSDG LCATGS DASIK+LDV+RMLAKSN E   +   E  GHPVIRTLYDH+DEVT L+FHPKE ILASGS+D T+KLFD+SK SAKKA +TITDAE + S++F+PTGDFLL GC  P+VRLYD NT QCFV S+    H  E+  VKWS DGKLYVS S+DG+ KIWDG+SS+V+ TF  AHDGAEVCSA FTRNGKY+L+SGKDSL KLWELST+RCLIAYTGAG TG+QE+RAQAVFNHT+D+VMFPDEATTSLCCWDSRNA+RK LLSLGHNG VR+IVHS +SPAFLT SDDFRARFW+KR
Sbjct:   13 PEFTLGGNVLKNREALYRLMISQLFYDGHQQVALQLSGIVGTEPACPPSERLHKVVTLGMEKERNALAASKAAASAPNNTNGMSLYSLDLEFDTEMRSEAPEPALYETAYVTSHKSFCRAGAFSSDGQLCATGSADASIKVLDVDRMLAKSNNEIPVSKQSE--GHPVIRTLYDHVDEVTCLEFHPKETILASGSKDNTIKLFDYSKASAKKACRTITDAEKIQSLSFNPTGDFLLAGCEHPVVRLYDVNTSQCFVSSISQQRHNAEVTVVKWSNDGKLYVSTSLDGTFKIWDGVSSKVVNTFEQAHDGAEVCSAYFTRNGKYILTSGKDSLIKLWELSTSRCLIAYTGAGTTGRQEHRAQAVFNHTDDYVMFPDEATTSLCCWDSRNASRKTLLSLGHNGAVRNIVHSTVSPAFLTSSDDFRARFWFKR 440

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|780628358|ref|XP_011684871.1| (PREDICTED: cleavage stimulation factor subunit 1 [Wasmannia auropunctata])

HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0
Identity = 302/431 (70.07%), Postives = 351/431 (81.44%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P NIIK+RE LYRLMISQLFYDGHQ +AVQL N +Q EP CPPS++L HL+ +G   + D              +S +  LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS  E ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ + TFA AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    4 PEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMMQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSTSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|970898967|ref|XP_015115117.1| (PREDICTED: cleavage stimulation factor subunit 1 [Diachasma alloeum])

HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0
Identity = 302/434 (69.59%), Postives = 351/434 (80.88%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIKNSRNE---------------VLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P N+IKNRE+LYRLMISQLFYDGHQ IAVQL N IQ EP CPPS++L HL+ LG   + D +  +NE                LGPGLDLE++T+  + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS  + ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P++RLYD NT QCFV S+P+H H   I SVK+SPD K Y SA  DGSIK+WDG+S++ I TF  AHD  EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFWY+R
Sbjct:   11 PEIDPKNVIKNRETLYRLMISQLFYDGHQTIAVQLSNLIQAEPPCPPSDRLLHLMLLGTAHEPD-RAKKNEGSNANHTPSFSSFDNTLGPGLDLEYETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMT-PGDQAGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGTNHPVIRLYDINTAQCFVCSIPNHQHTAGITSVKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDSYEVCSVAFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWYRR 442

The following BLAST results are available for this feature:

BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
BLAST of cleavage stimulation factor 50 kda subunit vs. nr

BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000005728	1.177e-168	66.10	supercontig:LSalAtl2s:LSalAtl2s309:717547:718847:-...	[more]
EMLSAG00000001111	1.110e-20	27.60	supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:...	[more]
EMLSAG00000006156	1.027e-13	26.64	supercontig:LSalAtl2s:LSalAtl2s336:420428:421924:-...	[more]
EMLSAG00000009105	2.009e-13	29.87	supercontig:LSalAtl2s:LSalAtl2s573:267932:269786:1...	[more]
EMLSAG00000003976	2.143e-13	25.49	supercontig:LSalAtl2s:LSalAtl2s213:19395:20797:-1 ...	[more]
EMLSAG00000006041	3.744e-13	28.10	supercontig:LSalAtl2s:LSalAtl2s327:367648:370815:1...	[more]
EMLSAG00000000276	1.166e-12	26.20	supercontig:LSalAtl2s:LSalAtl2s1041:88294:89557:1 ...	[more]
EMLSAG00000007279	3.244e-12	24.50	supercontig:LSalAtl2s:LSalAtl2s409:120750:123834:-...	[more]
EMLSAG00000008384	8.116e-12	25.44	supercontig:LSalAtl2s:LSalAtl2s512:319189:321924:1...	[more]
EMLSAG00000011537	1.321e-11	26.90	supercontig:LSalAtl2s:LSalAtl2s799:381305:384324:1...	[more]

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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|67460105\|sp\|Q5BJQ6.1\|CSTF1_RAT	0.000e+0	60.48	RecName: Full=Cleavage stimulation factor subunit ...	[more]
gi\|461848\|sp\|Q05048.1\|CSTF1_HUMAN	0.000e+0	60.48	RecName: Full=Cleavage stimulation factor subunit ...	[more]
gi\|67460449\|sp\|Q5R8K2.1\|CSTF1_PONAB	0.000e+0	60.48	RecName: Full=Cleavage stimulation factor subunit ...	[more]
gi\|75329664\|sp\|Q8L4J2.1\|CTF50_ARATH	2.132e-83	36.59	RecName: Full=Cleavage stimulation factor subunit ...	[more]
gi\|20140995\|sp\|Q8YTC2.1\|Y2800_NOSS1	2.505e-23	27.16	RecName: Full=Uncharacterized WD repeat-containing...	[more]
gi\|74996742\|sp\|Q54KL5.1\|WDR5_DICDI	1.435e-22	28.63	RecName: Full=WD repeat-containing protein 5 homol...	[more]
gi\|75335857\|sp\|Q9M2Z2.1\|WDR5A_ARATH	9.594e-22	24.40	RecName: Full=COMPASS-like H3K4 histone methylase ...	[more]
gi\|3123159\|sp\|Q17963.1\|WDR51_CAEEL	3.661e-21	27.89	RecName: Full=WD repeat-containing protein wdr-5.1	[more]
gi\|20532311\|sp\|Q8YRI1.1\|YY46_NOSS1	6.555e-21	27.01	RecName: Full=Uncharacterized WD repeat-containing...	[more]
gi\|322518324\|sp\|B6GZD3.1\|LIS12_PENCW	2.026e-20	28.37	RecName: Full=Nuclear distribution protein nudF 2;...	[more]

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BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|795053941\|ref\|XP_011871011.1\|	0.000e+0	70.30	PREDICTED: cleavage stimulation factor subunit 1 i...	[more]
gi\|815799842\|ref\|XP_012220564.1\|	0.000e+0	70.53	PREDICTED: cleavage stimulation factor subunit 1 [...	[more]
gi\|751218509\|ref\|XP_011162294.1\|	0.000e+0	70.30	PREDICTED: cleavage stimulation factor subunit 1 [...	[more]
gi\|951565066\|ref\|XP_014481393.1\|	0.000e+0	69.79	PREDICTED: cleavage stimulation factor subunit 1 [...	[more]
gi\|826453264\|ref\|XP_012532678.1\|	0.000e+0	70.30	PREDICTED: cleavage stimulation factor subunit 1 i...	[more]
gi\|769832588\|ref\|XP_011643192.1\|	0.000e+0	68.15	PREDICTED: LOW QUALITY PROTEIN: cleavage stimulati...	[more]
gi\|1153833364\|ref\|XP_020293282.1\|	0.000e+0	68.49	cleavage stimulation factor subunit 1 isoform X1 [...	[more]
gi\|225719552\|gb\|ACO15622.1\|	0.000e+0	70.47	Cleavage stimulation factor 50 kDa subunit [Caligu...	[more]
gi\|780628358\|ref\|XP_011684871.1\|	0.000e+0	70.07	PREDICTED: cleavage stimulation factor subunit 1 [...	[more]
gi\|970898967\|ref\|XP_015115117.1\|	0.000e+0	69.59	PREDICTED: cleavage stimulation factor subunit 1 [...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold403_size186359	supercontig	scaffold403_size186359:168922..170880 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold403_size186359-processed-gene-0.17-mRNA-1	snap_masked-scaffold403_size186359-processed-gene-0.17-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold403_size186359:168922..170880+

gene from alignment at scaffold403_size186359:168922..170880+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold403_size186359-processed-gene-0.17 ID=snap_masked-scaffold403_size186359-processed-gene-0.17|Name=cleavage stimulation factor 50 kda subunit|organism=Tigriopus kingsejongensis|type=gene|length=1959bp|location=Sequence derived from alignment at scaffold403_size186359:168922..170880+ (Tigriopus kingsejongensis)
GGTTGCGCGAGTCCAATCAATGTCATGGGTTGCGAATCTGGACTGGGACC
AATGTTGATGTACGAGAAGTTGTCCTCTTGACCACGGATCGACAACGTAA
ATTCTGTGCCTGGAGCCCTGGACCCTCAGCCGGAGGTGTACTACCCGAGA
TGAACCACCCCAATGCCAATTTCGGGGGCGGTAGTGGGTCTAGACCCATG
TTGGGGTACGTATGGGGGTCAATCCTGGTCAGGCCGGGTCAGGTTCACGC
TCGTGGGGTGACTTTCCAGGAGTGGCGGGGGCTTCAACGCCCCTTTCGAG
GGCCCTCGAGGTGGATTCGGTGGAGCCGGACCATTCGGTGGTGGAGGTGG
CCTGAGCGCCAAATTTCCACCTGCGGGTACGCAAGCGAATGCCACCACGT
TGGGAGGCAATCGAGACGCCGCTCCCGAATTCATTCCGGGCAATATCATC
AAGAATCGAGAGAGCCTCTACCGACTCATGATCAGCCAGCTCTTCTACGA
CGGTCACCAGCAGATTGCCGTTCAGCTTCAGAACGCCATTCAGCCTGAGC
CGGCTTGCCCCCCGTCCGAGAAGCTCTTTCATCTCGTCAATCTGGGCATG
GAGCGGGACACAGACATCAAGAACTCTCGCAACGAGGTACTGGGCCCGGG
CCTGGACCTCGAGTTCGACACTGATCTGCCCAGCTCGGCCCCCGAGCCCG
CTTACTACGAGACGGCCTACGTGACCAGCCACAAGGGCAATTGTCGGGCT
GGAGCCTTTTCCTCGGACGGTACGCTCTGTGCCACGGGCTCGGTGGACGC
CTCCATCAAGATTCTAGACGTGGAGCGGATGCTGGCCAAGTCCAATATCG
AGCACTTGTCCAATCCCAACCACGAGCAGGGAGGTCATCCGGTTATTCGG
ACCCTCTACGACCACATGGACGTAAGACCGGGAGGTGGGCCGCTAATTGT
TTATGAATGGGATTGACCGTGGGCTTTCCCTTCCCCAGGAGGTGACTGCG
CTCGATTTTCATCCAAAGGAACCCATTTTGGCCTCCGGCTCACGTGACTT
CACGGTTAAGCTCTTCGATTTTAGCAAGACTTCGGCGAAAAAGGCCATGA
AGACCATCACCGATGCCGAACCGGTCACTTCAATTGCTTTCCATCCCACG
GGTATGTCGAGTCTTGGGTCGAAATGAGGCTACGGGGTGTTCCAAACGCT
CATGTTTCAGGCGACTTCCTGCTGGTGGGCTGCCATCAGCCCATTGTCAG
GCTCTACGACACGAATACGGGACAATGCTTTGTGGGGAGCGTTCCCAGTC
ACCACCACCAAAGGGAAATCTTGAGCGTCAAGTGGTCCCCCGACGGCAAG
GTAACCGCCTATCTGGGCCTCTTTTCAATGCTTCGCGAGCTTACTCTCCG
TCTTTGCAGCTGTACGTCTCCGCCTCTATGGACGGTTCCATCAAAATATG
GGACGGGATATCGAGCCAAGTGATTGCCACTTTTGCCAATGCCCACGACG
GGGCTGAGGTCTGCTCGGCTCAATTCACCCGGAACGGAAAGTACGTGCTG
TCATCGGGCAAGGATTCATTGTGCAAGCTATGGGAGTTGTCGACCACTCG
ATGTTTGATCGCCTACACTGGAGCGGGAGCCACCGGAAAGCAGGTGAGAC
CCGACCTTCATTGGCCGTCACAGTCACACCCATCTCAATCCATGCGCATT
TTCCAGGAGAATCGAGCCCAAGCTGTCTTCAATCACACGGAGGATTTCGT
GATGTTCCCGGACGAGGCCACCACCTCACTTTGTTGCTGGGACTCTCGTA
ATGCCACGCGGAAACAGCTTCTCTCTCTGGGTCACAACGGTGTGGTTCGA
CATATTGTCCACTCTCCAATCTCGCCGGCATTCCTGACGTGCTCCGATGA
TTTTCGGGCAAGGTTTTGGTACAAACGCCCCATTTCTCAATGAGCGGGGG
CTATGAAAA

Synonyms

The feature 'cleavage stimulation factor 50 kda subunit' has the following synonyms


Synonym
Tk07437

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