cleavage and polyadenylation specificity factor subunit 3, snap_masked-scaffold495_size155559-processed-gene-0.4 (gene) Tigriopus kingsejongensis

Overview
Namecleavage and polyadenylation specificity factor subunit 3
Unique Namesnap_masked-scaffold495_size155559-processed-gene-0.4
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. L. salmonis genes
Match: EMLSAG00000007282 (supercontig:LSalAtl2s:LSalAtl2s409:129273:131364:-1 gene:EMLSAG00000007282 transcript:EMLSAT00000007282 description:"maker-LSalAtl2s409-augustus-gene-1.22")

HSP 1 Score: 1170.61 bits (3027), Expect = 0.000e+0
Identity = 541/673 (80.39%), Postives = 613/673 (91.08%), Query Frame = 0
Query:   17 SSDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEKPRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSLM 689
            + ++ D+M  RPLGAGQEVGRSCH+LEFKDKR+LLDCGIHPGL+GMDALPFVD+IEAD+IDLLL+SHFHLDHAGALPWFL+KTTFKGK FMTHATKAIYRWLLSD+IKVSNI+TEQMLYSEQDLE SMEKI TLNFHEEKEV GI+FWAYNAGHVLGA MFMIEIAGVR LYTGDFSREEDRHLMA E P+L+P VLI+E+TYGT+IHEKREDRE RFTST+H+IV RGGRCLIPVFALGRAQELLLILDEYW AHPELHEIPIYYASSLAKKCMAVYQTFVNAMN++IRRQI+V+NPFVFKHISNLKGIDHFDD+GPCVILASPGMMQSGLSRELFESWC+D KNGCIVAGYCVEGTLAKHILSEPEE+ +MNGQ+LPLK+QV+YISFSAHTDYKQTSGFIR LKPPHVILVHGEANEMSRLKSALIREYEADP T IDFYNPRNTV+VDL+FRGEKMAKV+G+LA++ PI +HRVSG+LVKRNFNYHIL+ +DL KYTDMT S VTQRQS+YY GSFQLLQF++SQ   D+     +++ KK IR F +ID++HE +M+TLEWIASPVNDMYADAVLSA+LQAES++ P+YIP NA+VD MHFKEC +E+LQDMFGEESVP TFSGD+F + V +KKA ID+ +L+V C ED+    I++TA +KL  SL+
Sbjct:    4 NGEDSDRMVFRPLGAGQEVGRSCHLLEFKDKRILLDCGIHPGLSGMDALPFVDLIEADEIDLLLVSHFHLDHAGALPWFLEKTTFKGKVFMTHATKAIYRWLLSDYIKVSNISTEQMLYSEQDLEASMEKIQTLNFHEEKEVKGIRFWAYNAGHVLGAXMFMIEIAGVRTLYTGDFSREEDRHLMAXEXPSLKPHVLILESTYGTNIHEKREDRESRFTSTVHDIVTRGGRCLIPVFALGRAQELLLILDEYWGAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNERIRRQISVNNPFVFKHISNLKGIDHFDDVGPCVILASPGMMQSGLSRELFESWCSDPKNGCIVAGYCVEGTLAKHILSEPEEVASMNGQKLPLKMQVNYISFSAHTDYKQTSGFIRELKPPHVILVHGEANEMSRLKSALIREYEADPSTKIDFYNPRNTVSVDLFFRGEKMAKVMGSLAVDPPIQEHRVSGILVKRNFNYHILSPSDLPKYTDMTTSVVTQRQSIYYSGSFQLLQFMISQFGCDVTTPKEKEKKKKYIRVFDSIDVIHEDKMITLEWIASPVNDMYADAVLSAILQAESLDTPQYIPANARVDKMHFKECCIELLQDMFGEESVPKTFSGDKFGVIVHNKKALIDLKTLEVSCNEDETFGKIVETAITKLHESLV 676          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. L. salmonis genes
Match: EMLSAG00000000010 (supercontig:LSalAtl2s:LSalAtl2s1003:5798:7615:-1 gene:EMLSAG00000000010 transcript:EMLSAT00000000010 description:"augustus_masked-LSalAtl2s1003-processed-gene-0.0")

HSP 1 Score: 332.413 bits (851), Expect = 2.430e-105
Identity = 192/552 (34.78%), Postives = 300/552 (54.35%), Query Frame = 0
Query:   22 DKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIE-------ADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVS-NIATEQMLYSEQDLETSMEKIDTLNFHEEKEVN-GIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRN----TVAVDLYFRGEKMAKVVGNLAME---KPIDDHR---VSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQ-----LLQFLVSQLSGDL 549
            +++ + PLGAGQ+VGRSC ++    K ++LDCG+H G N     P    IE          +D ++ISHFHLDH GALP+  +   + G  +MTH TKAI   LL D  +V+     E   ++   ++  M+K+  ++ H+   V+  ++  AY AGHVLGAAMF +++    ++YTGD++   DRHL AA +   RPD+LI E+TY T + + +  RE  F   +H+ V RGG+ LIPVFALGRAQEL ++L+ YW       ++PI++++ L +K    Y+ F+   N+KIR+     N F FK I  L    +  + GP V+ A+PGM+  GLS  +FE WCT+  N  I+ GYCV GT+   IL+   ++    G+ + +K+ V Y+SFSAH D K     I   +P +V+LVHGE  +M  LK+ +  E+       +  + P N    T++  +   G   + ++    ++   KP D  R   + GV+V ++    IL    + +   +   T+    +V +    Q     + Q L + +S DL
Sbjct:    3 EEIRVTPLGAGQDVGRSCLLVSIGGKNLMLDCGMHMGYNDERRFPDFSFIEDTPGAPLTPHLDAVIISHFHLDHCGALPYMTEMVGYSGPIYMTHPTKAIAPILLEDMRRVAVERKGESNFFTSAMIKECMKKVVAVHLHQVIRVDESLEIKAYYAGHVLGAAMFQVKVGNRSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTVRDSKRCRERDFLKKVHDCVERGGKVLIPVFALGRAQELCILLETYWDRMN--LKVPIFFSTGLTEKATNYYKMFITWTNEKIRKTFVERNMFDFKFIKPLDRA-YIQNPGPMVVFATPGMLHGGLSLAIFEEWCTNELNMIIMPGYCVAGTVGHKILNGTRKLEFSKGKTVEVKMSVQYMSFSAHADAKGIMQLISYCEPKNVMLVHGEQAKMEFLKAKIESEH------GVQCFMPANGETATISCPITLEGCVSSSIIKKEHLKYALKPPDPKRARLLHGVIVMKDETLSILDPEKIAEEFGIQSHTIRYTLNVPFRNEVQSPLSAVAQKLYNAISRDL 545          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. L. salmonis genes
Match: EMLSAG00000011843 (supercontig:LSalAtl2s:LSalAtl2s831:281816:286361:1 gene:EMLSAG00000011843 transcript:EMLSAT00000011843 description:"snap_masked-LSalAtl2s831-processed-gene-2.5")

HSP 1 Score: 140.969 bits (354), Expect = 4.177e-35
Identity = 101/366 (27.60%), Postives = 176/366 (48.09%), Query Frame = 0
Query:   28 PLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHE----EKEVNGIKFWAYNAGHVLGAAMFMIEIAGVR-VLYTGDFSREEDRHLMAAELPTL-RPDVLIVEA-TYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPE-LHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQI--AVSNPFVFKHISNLKGIDHFDDI-GPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSE 382
            PL  G+  G  C++LE  D   LLD G  P  N         +  A KID +L+S+  LDH GALP+ + K       F T     + +  + D  +      +  L++  +++++ +KI  L +++    + +  GI      AGH++G  ++ I   G   ++Y  DF+ +++RHL   +L  L RP +LI +A   G H   +R  R+ +  + I + +   G  LI     GR  EL  ++D+ W      L    +   ++ +   +   ++ +  M++K+ +      +NPF FKH+     ++  + +  P V+LAS   M+SG SRELF  WCT+ KN  I+       TLA  ++++
Sbjct:    9 PLSGGRSEGPHCYLLEVDDYNFLLDVGWDPFFNSKLKKEIKKV--ASKIDAVLLSYPDLDHLGALPYAVGKLGLSCSIFATVPVHKMGQMFMYDVYEAQRKQEDFDLFTLDEVDSAFDKITQLKYNQTFALKGKGEGISITPIPAGHMIGGTIWKIVKDGEEDIIYAVDFNHKKERHLNGCDLDKLLRPSILITDAFNIGCH-QLRRRVRDEKIMTNILQTLRNNGNVLICTDTAGRVLELAHMVDQLWQNRDSGLLAYSLALVNNFSYSVVEFAKSQIEWMSEKLMKTFEGKRNNPFQFKHLKLCHSMNEVNKVPSPKVVLASMPDMESGYSRELFIQWCTNPKNSIILTSRSPANTLAYDLMTK 371          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. L. salmonis genes
Match: EMLSAG00000011315 (supercontig:LSalAtl2s:LSalAtl2s77:664263:677061:-1 gene:EMLSAG00000011315 transcript:EMLSAT00000011315 description:"maker-LSalAtl2s77-augustus-gene-6.22")

HSP 1 Score: 78.9518 bits (193), Expect = 2.971e-15
Identity = 94/475 (19.79%), Postives = 176/475 (37.05%), Query Frame = 0
Query:   37 RSCHILEFKDKRVLLDCGIH-------------------------PGLNGMD---------------------ALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIK------------------------------VSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNG-IKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVS-NPFVFKHISNLKGIDHFDDI----------GPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKP 423
            + C++L FK  R++LDCG+                          PG+  M+                       P   + +   ID++LIS++      ALP+  +++ FKG  +MT  T  I R  + + I+                              VSN  + + +Y+ + +E+S+ K+  + + E+K+V G +     ++G+ LG++ ++I     ++ Y    S          ++P    D LI+ +   T   +  +     F  ++ E    GG  L+P +  G   +L   L     AH  L  IP+Y+ S +A   +A        ++   + ++ +   PF    ++    +  F  +           PC++      ++ G      E W ++S N           T+     S P E      Q  PL ++V +       ++ Q    IR LKP
Sbjct:  756 KPCYVLNFKGVRIMLDCGLDLSTALHYLPIPLVHSQKLSNLGNYVPGIENMNFCEGELKDCNGKIFVDSSPEFCTPHSGLFDFADIDVILISNYTC--MLALPYVTEESGFKGIVYMTEPTLHIGRLFMEETIEYMERTALSSRHSSSGSWKDILHALPPPLCDVSNPRSWKRIYNRKQMESSLSKVQLMGYSEKKDVFGLLTVSPVSSGYCLGSSNWIISSGFEKIGYVSGTSTLTTHPRPLNQIPLRNVDCLIMTSLTQTPT-QMPDPMIGEFCKSVVETTRLGGNVLVPCYPSGITYDLFECLAGQMDAH-SLCTIPMYFVSPVADSSLAYSNIMAEWLSQSKQNKVYLPEEPFPHGGLARNGRLKSFRTMHDENFSNEYRQPCIMFCGHPSLRFGEVIHFIELWGSNSNN-----------TIVFTEPSFPYEAALAPFQ--PLHMKVIHCPIDTSLNFSQAKKLIRDLKP 1213          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|74947821|sp|Q9VE51.2|CPSF3_DROME (RecName: Full=Cleavage and polyadenylation specificity factor 73)

HSP 1 Score: 967.992 bits (2501), Expect = 0.000e+0
Identity = 452/673 (67.16%), Postives = 562/673 (83.51%), Query Frame = 0
Query:   19 DEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQL-SGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAE-SIEKPRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSLM 689
            +E D + I+PLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALP+VD+IEAD+IDLL ISHFHLDH GALPWFL KT+FKG+CFMTHATKAIYRW+LSD+IK+SNI+TEQMLY+E DLE SMEKI+T+NFHEE++V G++F AY AGHVLGAAMFMIEIAG+++LYTGDFSR+EDRHLMAAE+P ++PDVLI E+TYGTHIHEKREDRE+RFTS + +IV +GGRCLIPVFALGRAQELLLILDE+W+ +P+LHEIPIYYASSLAKKCMAVYQT++NAMND+IRRQIAV+NPFVF+HISNLKGIDHF+DIGPCVI+ASPGMMQSGLSRELFESWCTD KNG I+AGYCVEGTLAK +LSEPEEIT ++GQ+LPL + V YISFSAHTDY+QTS FIR LKP HV+LVHGE NEMSRLK AL REYEAD  T+I FYNPRNT AVDLYFRGEK AKV+G+LA +      ++SGVLVKR+F YH+LA +DL KYTDM++S VTQRQS+ +  S   L+ L+ ++ +G +E+++ E++    +R FG I++  E++++ +EW A+ VND+YADAVL+ ++Q+E      +      K +   F+ECL+E LQD FG+  VP  F GD   +TV  K+A I++ +L + C EDD+L+ ++ T   KL  +L+
Sbjct:   13 EESDLLQIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPYVDLIEADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKISNISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYIAGHVLGAAMFMIEIAGIKILYTGDFSRQEDRHLMAAEVPPMKPDVLITESTYGTHIHEKREDRENRFTSLVQKIVQQGGRCLIPVFALGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQTYINAMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAKAVLSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTSEFIRLLKPTHVVLVHGEQNEMSRLKLALQREYEADASTDIKFYNPRNTHAVDLYFRGEKTAKVMGSLAAKNSEVGSKLSGVLVKRDFKYHLLAPSDLGKYTDMSMSVVTQRQSIPWGSSLSTLELLLDRIGAGCVEVLEAERK----LRVFGCIELTVEQKIIVMEWQATHVNDVYADAVLACIMQSELGGTNLKGATKQTKSEDSRFRECLIETLQDTFGDNCVPKMFEGDLLPVTVSGKRAEINLETLAISCAEDDVLRQMLNTTVQKLHQTLV 681          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|18202362|sp|P79101.1|CPSF3_BOVIN (RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; AltName: Full=mRNA 3'-end-processing endonuclease CPSF-73)

HSP 1 Score: 952.97 bits (2462), Expect = 0.000e+0
Identity = 449/678 (66.22%), Postives = 556/678 (82.01%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAES---IEKPRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPE----DDMLQNIIQTACSKLKLSL 688
            ++E D++ IRPLGAGQEVGRSC ILEFK ++++LDCGIHPGL GMDALP++D+I+  +IDLLLISHFHLDH GALPWFLQKT+FKG+ FMTHATKAIYRWLLSD++KVSNI+ + MLY+E DLE SM+KI+T+NFHE KEV GIKFW Y+AGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P ++PD+LI+E+TYGTHIHEKRE+RE RF +T+H+IVNRGGR LIPVFALGRAQELLLILDEYW  HPELH+IPIYYASSLAKKCMAVYQT+VNAMNDKIR+QI ++NPFVFKHISNLK +DHFDDIGP V++ASPGMMQSGLSRELFESWCTD +NG I+AGYCVEGTLAKHI+SEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIRALKPPHVILVHGE NEM+RLK+ALIREYE + + +I+ +NPRNT AV L FRGEK+AKV+G LA +KP    RVSG+LVKRNFNYHIL+  DL  YTD+ +STV Q Q++ Y G F LL + + +L+GD+E  + E + K  ++ F  I ++ E  MV LEW+A+P NDMYAD V + +L+ +S   I K      + K++M  + + L  MLQD+FGE+ V +   G    +TV+ K A+I++ +  V+C E    D+ L+ +++ A  +L  +L
Sbjct:    6 AEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVE--ELEIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQKVSKKLEMHVYSKRLEIMLQDIFGEDCV-SVKDGSILSVTVDGKTANINLETRTVECEEGSEDDESLREMVELAAQRLYEAL 680          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|341940395|sp|Q9QXK7.2|CPSF3_MOUSE (RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; Short=mRNA 3'-end-processing endonuclease CPSF-73)

HSP 1 Score: 948.732 bits (2451), Expect = 0.000e+0
Identity = 447/678 (65.93%), Postives = 556/678 (82.01%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAES---IEKPRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPE----DDMLQNIIQTACSKLKLSL 688
            ++E D++ IRPLGAGQEVGRSC ILEFK ++++LDCGIHPGL GMDALP++D+I+  +IDLLLISHFHLDH GALPWFLQKT+FKG+ FMTHATKAIYRWLLSD++KVSNI+ + MLY+E DLE SM+KI+T+NFHE KEV GIKFW Y+AGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P ++PD+LI+E+TYGTHIHEKRE+RE RF +T+H+IVNRGGR LIPVFALGRAQELLLILDEYW  HPELH+IPIYYASSLAKKCMAVYQT+VNAMNDKIR+QI ++NPFVFKHISNLK +DHFDDIGP V++ASPGM+Q+GLSRELFESWCTD +NG I+AGYCVEGTLAKHI+SEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIRALKPPHVILVHGE NEM+RLK+ALIREYE + + +I+ +NPRNT AV L FRGEK+AKV+G LA +KP    RVSG+LVKRNFNYHIL+  DL  YTD+ +STV Q Q++ Y G F LL + + +L+GD+E  + E + K  ++ F +I +V E  MV LEW+A+P NDMYAD V + +L+ +S   I K      + K++M  + + L  MLQD+FGE+ V +        +TV+ K A+I++ +  V+C E    D+ L+ +++ A  +L  +L
Sbjct:    6 AEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFYLLYYQLQKLTGDVE--ELEIQEKPALKVFKSITVVQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQKVSKKLEMHVYSKRLEVMLQDIFGEDCV-SVKDDSVLSVTVDGKTANINLETRAVECEEGSEDDESLREMVELAAQRLYEAL 680          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|18203503|sp|Q9UKF6.1|CPSF3_HUMAN (RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit; Short=CPSF 73 kDa subunit; AltName: Full=mRNA 3'-end-processing endonuclease CPSF-73)

HSP 1 Score: 948.347 bits (2450), Expect = 0.000e+0
Identity = 447/678 (65.93%), Postives = 555/678 (81.86%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAES---IEKPRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPE----DDMLQNIIQTACSKLKLSL 688
            ++E D++ IRPLGAGQEVGRSC ILEFK ++++LDCGIHPGL GMDALP++D+I+  +IDLLLISHFHLDH GALPWFLQKT+FKG+ FMTHATKAIYRWLLSD++KVSNI+ + MLY+E DLE SM+KI+T+NFHE KEV GIKFW Y+AGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P ++PD+LI+E+TYGTHIHEKRE+RE RF +T+H+IVNRGGR LIPVFALGRAQELLLILDEYW  HPELH+IPIYYASSLAKKCMAVYQT+VNAMNDKIR+QI ++NPFVFKHISNLK +DHFDDIGP V++ASPGMMQSGLSRELFESWCTD +NG I+AGYCVEGTLAKHI+SEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIRALKPPHVILVHGE NEM+RLK+ALIREYE + + +I+ +NPRNT AV L FRGEK+AKV+G LA +KP    RVSG+LVKRNFNYHIL+  DL  YTD+ +STV Q Q++ Y G F LL + + +L+GD+E  + E + K  ++ F  I ++ E  MV LEW+A+P NDMYAD V + +L+ +S   I K      + K++M  + + L  MLQD+FGE+ V +        +TV+ K A++++ +  V+C E    D+ L+ +++ A  +L  +L
Sbjct:    6 AEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLCYQLQKLTGDVE--ELEIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQKVSKKLEMHVYSKRLEIMLQDIFGEDCV-SVKDDSILSVTVDGKTANLNLETRTVECEEGSEDDESLREMVELAAQRLYEAL 680          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|75262219|sp|Q9C952.1|CPSF3_ARATH (RecName: Full=Cleavage and polyadenylation specificity factor subunit 3-I; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa subunit I; Short=AtCPSF73-I; Short=CPSF 73 kDa subunit I)

HSP 1 Score: 718.383 bits (1853), Expect = 0.000e+0
Identity = 329/610 (53.93%), Postives = 445/610 (72.95%), Query Frame = 0
Query:    2 ALKRAHSPGFIVESTSSDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHE-KRMVTLEWIASPVNDMYADAVLSAVLQAESIEKPRYI 610
            +LKR   P        S + D++ + PLGAG EVGRSC  + F+ K +L DCGIHP  +GM ALP+ D I+   ID+LLI+HFH+DHA +LP+FL+KTTF G+ FMTHATKAIY+ LL+D++KVS ++ E ML+ EQD+  SM+KI+ ++FH+  EVNGIKFW Y AGHVLGAAMFM++IAGVR+LYTGD+SREEDRHL AAELP   PD+ I+E+T G  +H+ R  RE RFT  IH  V +GGR LIP FALGRAQELLLILDEYWA HP+LH IPIYYAS LAKKCMAVYQT++ +MND+IR Q A SNPFVFKHIS L  ID F+D+GP V++A+PG +QSGLSR+LF+SWC+D KN CI+ GY VEGTLAK I++EP+E+T MNG   PL +QV YISFSAH DY QTS F++ L PP++ILVHGEANEM RLK  L+ E+   PD N     P+N  +V++YF  EK+AK +G LA + P     VSG+LVK+ F Y I+A ++L  ++ ++ +TVTQR ++ + G+F +++  + ++   +E    E+     ++    + +  E ++ ++L+W + P++DM +D++++ +L   S E P+ +
Sbjct:    7 SLKRREQP-------ISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIILVHGEANEMMRLKQKLLTEF---PDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKTPDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIFESVEFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNI-SREVPKIV 605          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|74860395|sp|Q86A79.1|CPSF3_DICDI (RecName: Full=Cleavage and polyadenylation specificity factor subunit 3; Short=Cleavage and polyadenylation specificity factor 3)

HSP 1 Score: 686.797 bits (1771), Expect = 0.000e+0
Identity = 316/596 (53.02%), Postives = 443/596 (74.33%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEAD--KIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQ-MLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQES-------KKIIRAFGAIDIVHEKRM-VTLEWIASPVNDMYADAVLSAVLQAE 602
            +++ D + I P+G+G EVGRSC +L++K K+V+ DCG+HP  +G+ +LPF D IE+D   IDLLL+SHFHLDHA A+P+F+ KT FKG+ FMTH TKAIY  LLSD++KVSNI  +  ML+ + DL+ S+EKI+ + + ++ E NGIK   +NAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLM AE P ++ DVLI+E+TYG  +HE R +RE RFTS++H++V R G+CLIPVFALGRAQELLLILDEYW A+P+LH +PIYYAS+LAKKCM VY+T++N MND++R Q  VSNPF FKHI N+KGI+ FDD GPCV +ASPGM+QSGLSR+LFE WC+D +NG ++ GY VEGTLAKHI+SEP EIT ++   +PL L VSY+SFSAH+D+ QTS FI+ ++PPHV+LVHG+ANEMSRL+ +L+ +++      I+   P+N ++V L FR EK+AK +G++    P  +  + G+LV ++F +HIL+A+D+  YT++  + + Q+ ++ +  ++ +   L+S L    E +    ES       K  I  +  I +++   + + LEW ++ VNDM  D++++ + Q E
Sbjct:   30 TEDDDILEITPIGSGSEVGRSCVLLKYKGKKVMFDCGVHPAYSGLVSLPFFDSIESDIPDIDLLLVSHFHLDHAAAVPYFVGKTKFKGRVFMTHPTKAIYGMLLSDYVKVSNITRDDDMLFDKSDLDRSLEKIEKVRYRQKVEHNGIKVTCFNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMGAETPPVKVDVLIIESTYGVQVHEPRLEREKRFTSSVHQVVERNGKCLIPVFALGRAQELLLILDEYWIANPQLHHVPIYYASALAKKCMGVYRTYINMMNDRVRAQFDVSNPFEFKHIKNIKGIESFDDRGPCVFMASPGMLQSGLSRQLFERWCSDKRNGIVIPGYSVEGTLAKHIMSEPAEITRLDNVNVPLNLTVSYVSFSAHSDFLQTSEFIQEIQPPHVVLVHGDANEMSRLRQSLVAKFKT-----INVLTPKNAMSVALEFRPEKVAKTLGSIITNPPKQNDIIQGILVTKDFTHHILSASDIHNYTNLKTNIIKQKLTLPFAQTYHI---LISTLEQIYEQIIESTESTGGGGNEKPTITIYNEIKLIYNIGVSIILEWNSNTVNDMICDSIIALISQIE 617          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|74703664|sp|Q4PEJ3.1|YSH1_USTMA (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1)

HSP 1 Score: 652.129 bits (1681), Expect = 0.000e+0
Identity = 303/604 (50.17%), Postives = 435/604 (72.02%), Query Frame = 0
Query:   22 DKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFK---GKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEV-NGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQI-AVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDL-ELVDTEQESKKIIRAFGAIDIVHEKRM-VTLEWIASPVNDMYADAVLSAVLQAESIEKPRYIPTNAKVDM 618
            D++TI  LGAGQEVGRSC +L+++ K ++ D G+HP   G+ ALPF+D ++   +D +LI+HFHLDHA AL + ++KT F+   GK +MTH TKA+YR+L+SDF+++SN   +  L+ E ++  S  +I+ ++FH++  +  G++F +Y+AGHVLGA MF+IEIAG+R+LYTGDFSREEDRHL+ AE+P ++PDVLI E+TYGT  HE R D+EHRFTS IH I+ RGGR L+PVF LGRAQELLL+LDEYWAAHPELH +PIYYAS+LAKKC++VYQT+++ MND IR +     NPFVFKHISNL+ ++ F+D GPCV++ASPG MQSG+SREL E W  D +NG IV+GY VEGT+A++IL+EP+EI  +NGQ++P ++ V YISFSAH D+ Q S FI  +K  H++LVHGE N MS+L++AL   + A   +++  + PRN   + L FR ++ AK +G +A + P     V G+L+ ++F Y IL   DL  +T ++ ST+ QRQ V    S++++++ +  + G L E VD E E  + +R  GA+D+    R  + +EW++S  NDM AD++++ +L  +S       P++ K+ M
Sbjct:   22 DQLTIEMLGAGQEVGRSCCVLKYRGKTIVCDTGVHPAFTGIAALPFIDELDWSTVDAILITHFHLDHAAALTYIMEKTNFRDGHGKVYMTHPTKAVYRFLMSDFVRISNAGNDDNLFDENEMLASWRQIEAVDFHQDVSIAGGLRFTSYHAGHVLGACMFLIEIAGLRILYTGDFSREEDRHLVQAEIPPVKPDVLICESTYGTQTHEPRLDKEHRFTSQIHHIIKRGGRVLLPVFVLGRAQELLLLLDEYWAAHPELHSVPIYYASALAKKCISVYQTYIHTMNDHIRTRFNRRDNPFVFKHISNLRSLEKFEDRGPCVMMASPGFMQSGVSRELLERWAPDKRNGLIVSGYSVEGTMARNILNEPDEIIGINGQKIPRRMSVDYISFSAHVDFAQNSRFIDEIKAQHIVLVHGEQNNMSKLRAALQARFTAR-GSDVKIHTPRNCEPLVLQFRAQRTAKAIGTIAAKPPAQGDIVDGLLISKDFAYTILDPKDLTDFTGLSTSTIVQRQRVALAVSWEMVRWHLQGMYGRLQEGVDAE-EGLRTLRIMGAVDVRQSARHELLVEWVSSIANDMVADSIVALLLGIDS------APSSVKMTM 617          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|384872669|sp|O13794.2|YSH1_SCHPO (RecName: Full=Endoribonuclease ysh1; AltName: Full=mRNA 3'-end-processing protein ysh1)

HSP 1 Score: 627.861 bits (1618), Expect = 0.000e+0
Identity = 306/696 (43.97%), Postives = 452/696 (64.94%), Query Frame = 0
Query:   14 ESTSSDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTE--QESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEKPRYIP-TNAKVDMMHFK--------------ECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSLMLDE 692
            E    D  D +    LGAG EVGRSCH++++K K V+LD G+HP   G+ ALPF D  +   +D+LLISHFHLDH  +LP+ +QKT F+G+ FMTH TKA+ +WLLSD++KVSN+  E  LY E+DL  + ++I+ +++H   EV GIKF  Y+AGHVLGA M+ +E+AGV +L+TGD+SREEDRHL  AE+P  RPDVLI E+TYGT  H+ R ++E R  + IH  +  GGR L+PVFALGRAQELLLILDEYW  H +L  +PIYYASSLA+KCMA++QT+VN MND IR+  A  NPF+F+ + +L+ ++ FDDIGP VILASPGM+Q+G+SR L E W  D +N  ++ GY VEGT+AK I +EP EI +++GQ++P ++ V  +SF+AH DY Q S FI  +   H+ILVHGE   M RLKSAL  ++  +   ++  Y PRN V + L F+GE++ + +G +A+ KP +   +SG+L++++ NY +++A DL+ ++D+T + +TQ+Q + +  S +L  F + Q+ G ++   T+  Q    ++ A   + ++ E ++  LEW+ + +ND  AD+V++ +L  ES   P  +  T+ K + +H                + L+  L + FG ES+  T  G   EI  E  +A ID  ++ V+C  + +   ++      +   L   E
Sbjct:    9 EDAPVDPSDLLEFINLGAGNEVGRSCHVIQYKGKTVMLDAGVHPAYTGLSALPFFDEFDLSTVDVLLISHFHLDHVASLPYVMQKTNFRGRVFMTHPTKAVCKWLLSDYVKVSNVGMEDQLYDEKDLLAAFDRIEAVDYHSTIEVEGIKFTPYHAGHVLGACMYFVEMAGVNILFTGDYSREEDRHLHVAEVPPKRPDVLITESTYGTASHQPRLEKEARLLNIIHSTIRNGGRVLMPVFALGRAQELLLILDEYWNNHLDLRSVPIYYASSLARKCMAIFQTYVNMMNDNIRKIFAERNPFIFRFVKSLRNLEKFDDIGPSVILASPGMLQNGVSRTLLERWAPDPRNTLLLTGYSVEGTMAKQITNEPIEIVSLSGQKIPRRMAVEELSFAAHVDYLQNSEFIDLVNADHIILVHGEQTNMGRLKSALASKFH-NRKVDVKVYTPRNCVPLYLPFKGERLVRALGKVAVHKPKEGDIMSGILIQKDANYKLMSAEDLRDFSDLTTTVLTQKQVIPFFSSMELANFHLKQMFGYVKQSKTKAGQPQYTVMDAI-TLTLIQEHKL-ALEWVGNIMNDTIADSVITILLGIES--SPASVKLTSHKCNHLHSHLDKPPKVSKEEDRIKKLMMFLDNQFG-ESMTKTEKG--VEIKFEKYEASIDFSTMKVECSNEALRSRVVHVLSRAINTILPFSE 696          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|223634672|sp|Q6C2Z7.2|YSH1_YARLI (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1)

HSP 1 Score: 620.542 bits (1599), Expect = 0.000e+0
Identity = 289/546 (52.93%), Postives = 399/546 (73.08%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIA-TEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQI--AVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEI-TAMNGQ-RLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNID--FYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQ 556
            +D+ D  +   LG G+EVGRSCH++ FK K ++LD G+HP  +G+ +LPF D  +   ID+LLISHFHLDHA +LP+ +QKT FKG+ FMTH TK IYRWLLSDF++V++ A ++  LYSE DL  S  KI+T+++H   EVNG+KF AY+AGHVLGAAM+ IE+ GV+VL+TGD+SREEDRHL  AE+P ++PD+LI E+TYGT  H  R +RE R T  IH  +++GG+CL+PVFALGRAQE+LLILDEYW AHP+L E  IYYAS+LAKKC+AVYQT++N MND IRR+     +NPF FK+I N+K +D FDD+GPCV++ASPGM+QSG+SR L E W  D KN  I+ GY VEGT+AK I++EP EI +A N   ++P +L V  +SF+AH D++Q S FI  +   ++ILVHGE N M RLK+AL+ +Y    ++  +   YNPRN   V+L F+G K+AK VG +A EKP     +SGV+V+++FNY ++   DL+++  ++ S+V +RQ+V       L+++ + Q+ G +E+ +TE 
Sbjct:   31 TDDSDTFSFVALGGGREVGRSCHVISFKGKTIMLDAGVHPAHSGLASLPFYDEFDLSTIDILLISHFHLDHAASLPYVMQKTNFKGRVFMTHPTKGIYRWLLSDFVRVTSGAESDPDLYSEADLTASFNKIETIDYHSTMEVNGVKFTAYHAGHVLGAAMYTIEVGGVKVLFTGDYSREEDRHLNQAEVPPMKPDILICESTYGTGTHLPRLEREQRLTGLIHSTLDKGGKCLLPVFALGRAQEILLILDEYWEAHPDLQEFSIYYASALAKKCIAVYQTYINMMNDNIRRRFRDQKTNPFRFKYIKNIKNLDRFDDMGPCVMVASPGMLQSGVSRSLLERWAPDPKNTLILTGYSVEGTMAKQIINEPNEIPSAQNPDLKVPRRLAVEELSFAAHVDFQQNSEFIDLVDSKNIILVHGELNNMQRLKAALLAKYRGLKNSPREKTIYNPRNCEEVELAFKGVKVAKTVGKMAEEKPHVGQIISGVVVQKDFNYGLMGVADLREHVGLSTSSVLERQTVTVNAGVDLVKYHLEQMFGYVEMRETEN 576          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|442570103|sp|Q74ZC0.2|YSH1_ASHGO (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1)

HSP 1 Score: 594.349 bits (1531), Expect = 0.000e+0
Identity = 297/651 (45.62%), Postives = 436/651 (66.97%), Query Frame = 0
Query:   29 LGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIA-------TEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPEL---HEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQI--AVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQ--RLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDT--NIDFYNPRNTVAVDLYFRGEKMAKVVGNLA----------MEKPIDD--------------------------------HRVSGVLV--KRNFNYHILAANDLQK-YTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLE-LVDTE-------QESKK-------IIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAES 603
            LG   EVGRSCHIL++K K V+LD G+HP   G+ +LPF D  +  ++++LLISHFHLDHA +LP+ +Q+T F+G+ FMTH TKAIYRWLLSDF+KV+NI        +++ LY+++DL  S ++I+T+++H   +VNGIKF AY+AGHVLGAAMF +EIAG+R+L+TGD+SRE DRHL +AE+PTL  D+LIVE+T+GT  HE R  +E + T  IH  V++GGR L+PVFALGRAQE++LILDEYW+ H E     ++PI+YAS+LA+KCM+V+QT+VN MNDKIR++   + +NPF+FK+IS LK +D F D GP V+LASPGM+Q+GLSR+L E WC D KN  ++ GY VEGT+AK ++ EPE I ++N     +P + QV  ISF+AH D+++   F+  +  P++ILVHGE+N M RLKSAL+  + +   T   +  YNPRN VAVDL F+G K+AK VGN+            E+P +D                                  +SG+LV  ++NF+ ++++ +DL++ +TD++ + + +RQ+V+ +   +L+ + + Q+ GD+E LVD E       +E +K       ++R  G I +     + TLEW  + ++D  AD++++ +L  +S
Sbjct:   16 LGGSNEVGRSCHILQYKGKTVMLDAGVHPAHQGIASLPFYDEFDLSQVEVLLISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIYRWLLSDFVKVTNIGNDNAGGVSDENLYTDEDLAESFDRIETVDYHSTIDVNGIKFTAYHAGHVLGAAMFQVEIAGLRILFTGDYSRELDRHLNSAEIPTLPSDILIVESTFGTATHEPRTSKEKKLTQLIHTTVSKGGRVLLPVFALGRAQEIMLILDEYWSQHAEQLGNGQVPIFYASNLARKCMSVFQTYVNMMNDKIRKKFRDSQTNPFIFKNISYLKNLDEFQDFGPSVMLASPGMLQNGLSRDLLEKWCPDEKNLVLITGYSVEGTMAKFLMLEPETIPSINNSDVSIPRRCQVEEISFAAHVDFRENLEFVEKIGAPNIILVHGESNPMGRLKSALLSNFSSLKGTEDEVRVYNPRNCVAVDLEFKGVKIAKAVGNIVDEMLPVVDEDKERPYNDPEDATSEEQPKEEPQDADKLPEEREQPEVEEERVISGILVSDEKNFDLNLVSLSDLREHHTDLSTTVLKERQTVHVDCRNELIFWHLCQMFGDIEVLVDEEGATLTKVEEDEKNTKPGQLVVRVMGDIKLSVVDHVATLEWTQNVISDAVADSIVAILLSVDS 666          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|1325300675|ref|XP_023331965.1| (cleavage and polyadenylation specificity factor 73-like [Eurytemora affinis] >gi|1325300678|ref|XP_023331966.1| cleavage and polyadenylation specificity factor 73-like [Eurytemora affinis] >gi|1325300682|ref|XP_023331967.1| cleavage and polyadenylation specificity factor 73-like [Eurytemora affinis] >gi|1325300686|ref|XP_023331969.1| cleavage and polyadenylation specificity factor 73-like [Eurytemora affinis] >gi|1325300690|ref|XP_023331970.1| cleavage and polyadenylation specificity factor 73-like [Eurytemora affinis] >gi|1325300693|ref|XP_023331971.1| cleavage and polyadenylation specificity factor 73-like [Eurytemora affinis] >gi|1325300696|ref|XP_023331972.1| cleavage and polyadenylation specificity factor 73-like [Eurytemora affinis] >gi|1325300700|ref|XP_023331973.1| cleavage and polyadenylation specificity factor 73-like [Eurytemora affinis])

HSP 1 Score: 1152.5 bits (2980), Expect = 0.000e+0
Identity = 531/673 (78.90%), Postives = 610/673 (90.64%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQ-ESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEKPRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSLM 689
            ++E D M I PLG+GQEVGRSCHI++FKDK+++LDCGIHPGL+GMDALPFVDMIEAD++DLLLISHFHLDHAGALPWFLQKTTF+GKCFMTHATKAI+ WLLSD+IKVSNI+T+QMLY+E DLE SM+KI T+NFHEEKEVNGIKFW YNAGHVLGAAMFM+EIAGV++LYTGDFSREEDRHLM+AE+P++RPDVLIVE+TYGTHIHEKREDRE+RFT T+ + V RGGRCLIPVFALGRAQELLLILDEYWAAHPELH+IPIYYASSLAKKCMAVYQTF+N+MN+KIRRQIAV+NPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTD KNGCIVAGYCVEGTLAK IL+EPEEITAMNGQRLPL++QV YISFSAHTDYKQTSGFIR LKPPHV+LVHGEANEMSRLK+AL+REYEADP  NI+ +NPRNTV+V+LYFRGEKMAKV+G+LAM+KP +  RVSG+LVKRNFNYHIL+  DL KYTD+T+STVTQRQS++Y GS  +LQ+L+ QL+G+LE VD E+ E K+I RAFG+IDI+ E +M+TLEWIASP NDM+ADAVLSAVLQAES+E P Y+P  AKVD MHFKECL+E+LQDMFGEESVP    GD+  ++V++KKA ID+    V C ED   Q I+QTA SKL  SL+
Sbjct:   13 TEESDLMKITPLGSGQEVGRSCHIVQFKDKKIMLDCGIHPGLSGMDALPFVDMIEADQVDLLLISHFHLDHAGALPWFLQKTTFRGKCFMTHATKAIFFWLLSDYIKVSNISTDQMLYTEADLEASMDKIQTINFHEEKEVNGIKFWCYNAGHVLGAAMFMLEIAGVKILYTGDFSREEDRHLMSAEIPSIRPDVLIVESTYGTHIHEKREDRENRFTQTVADTVQRGGRCLIPVFALGRAQELLLILDEYWAAHPELHDIPIYYASSLAKKCMAVYQTFINSMNEKIRRQIAVNNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDKKNGCIVAGYCVEGTLAKQILAEPEEITAMNGQRLPLRMQVDYISFSAHTDYKQTSGFIRQLKPPHVVLVHGEANEMSRLKAALVREYEADPTHNIEIHNPRNTVSVELYFRGEKMAKVMGSLAMQKPQEGVRVSGILVKRNFNYHILSPADLPKYTDLTMSTVTQRQSIFYSGSLPMLQYLLVQLTGELETVDGEKTERKQIFRAFGSIDIIVEPKMITLEWIASPCNDMFADAVLSAVLQAESMECPNYLPPPAKVDKMHFKECLIELLQDMFGEESVPKLLHGDKIYVSVDNKKAFIDLTQFKVSCEEDSTFQQIVQTAVSKLYQSLV 685          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|307177772|gb|EFN66769.1| (Cleavage and polyadenylation specificity factor subunit 3 [Camponotus floridanus])

HSP 1 Score: 1094.34 bits (2829), Expect = 0.000e+0
Identity = 498/672 (74.11%), Postives = 593/672 (88.24%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEK-PRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALPFVD++EAD+IDLLLISHFHLDH GALPWFLQKT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLETSM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW+ H ELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEM RLK+AL REYE DP T+++ +NPRNTVAV+LYFRGEK AKV+G LAME P    ++SGVLVKRNFNYH+LA  DL KYTDM++S V QRQSVY+  S  +L+ L++Q++G+LE+VD      K +R F  +D+  + ++VT+EW+A+PVNDMYAD+VL+A+LQAE +++ P+ +P   K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ +L+V C ED++ Q ++QTA  KL  SL
Sbjct: 1077 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHSELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRTLKPPHVVLVHGEQNEMGRLKAALQREYEDDPSTSMEIHNPRNTVAVELYFRGEKTAKVMGTLAMETPKPGQKLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQIAGNLEVVD-----DKKLRVFKNVDVTIDGKIVTMEWVATPVNDMYADSVLTAILQAEIMDQSPKILPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTCKEDEVFQQVVQTAVMKLHQSL 1743          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|815791278|ref|XP_012216216.1| (PREDICTED: uncharacterized protein LOC105668415 isoform X3 [Linepithema humile])

HSP 1 Score: 1091.26 bits (2821), Expect = 0.000e+0
Identity = 497/672 (73.96%), Postives = 590/672 (87.80%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEK-PRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALPFVD++EAD+IDLLLISHFHLDH GALPWFL KT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLETSM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW+ H ELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEM RLK+AL REYE DP T ++ +NPRNTVAV+LYFRGEK AKV+G LAME P  + ++SGVLVKRNFNYH+LA  DL KYTDM++S V QRQSVY+  S  +L+ L++Q++G LE++D      K +R F  +D+  + ++VT+EWIA+PVNDMYAD+VL+A+LQAE +++ P+ +P   K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ +L+V   ED+  Q I+QTA +KL  SL
Sbjct: 1115 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLLKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHSELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRTLKPPHVVLVHGEQNEMGRLKAALQREYEDDPSTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAMETPKPEQKLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQIAGSLEVID-----DKKLRVFKNVDVTIDGKIVTMEWIATPVNDMYADSVLTAILQAEIMDQSPKMLPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKEDETFQQIVQTAVTKLHQSL 1781          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|1339088170|ref|XP_023705187.1| (cleavage and polyadenylation specificity factor 73 [Cryptotermes secundus] >gi|1330919785|gb|PNF36035.1| Cleavage and polyadenylation specificity factor 73 [Cryptotermes secundus])

HSP 1 Score: 1090.49 bits (2819), Expect = 0.000e+0
Identity = 502/672 (74.70%), Postives = 597/672 (88.84%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIE-KPRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D + IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALPFVD+IEAD+IDLLLISHFHLDH GALPWFLQKT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLE+SM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKRE+RE RFT+ +H+IVNRGGRCLIPVFALGRAQELLLILDEYW+ HPELH+IPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVF+HISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTDSKNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEMSRLK+AL REYE DP T ++ +NPRNTVAV+LYFRGEK AKV+G LAMEKP   H++SG+LVKRNFNYH+LAA DL KYTDMT+S V QRQSV+Y G+  +L+ L+SQ+SG++E+++     +K +R F ++DI  + ++V LEWIA+PVNDMYADAVL+AV+QAE ++  P + P  +K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKA+ID+ +L+V C ED+  Q I+QTA +KL  SL
Sbjct:   13 AEESDLLLIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLIEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTEADLESSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNVHPDVLITESTYGTHIHEKREERESRFTALVHDIVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFRHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDSKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPHVVLVHGEQNEMSRLKAALQREYEDDPSTKMELHNPRNTVAVELYFRGEKTAKVMGTLAMEKPRPGHKLSGILVKRNFNYHMLAACDLSKYTDMTMSQVVQRQSVHYSGALPVLRLLLSQVSGNVEMLE-----EKKMRVFQSVDITLDNKIVMLEWIATPVNDMYADAVLAAVMQAEILDTTPSFFPIQSKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKANIDLLNLEVCCEEDEAFQQIVQTAVTKLYQSL 679          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|1227103194|gb|OXU26288.1| (hypothetical protein TSAR_012561 [Trichomalopsis sarcophagae])

HSP 1 Score: 1090.49 bits (2819), Expect = 0.000e+0
Identity = 505/672 (75.15%), Postives = 590/672 (87.80%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIE-KPRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+G+DALPFVD+IEAD+IDLLLISHFHLDH GALPWFLQKT FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLE+SM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW+ HPELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHFDDIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHVILVHGE NEMSRLK+AL REYE DP T ++ +NPRNTVAV+LYFRGEK AKV+G LAME P    ++SGVLVKRNFNYH+L   DL KYTDM+IS V QRQSVYY  S   L+ L++Q++G L+++D      K +R F  +D+  E ++VT+EW+A+PVNDMYADAVL+A+LQAE+++  P+ +    K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ SLDV C ED++ Q I+QTA SKL  SL
Sbjct:   16 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGLDALPFVDIIEADEIDLLLISHFHLDHCGALPWFLQKTNFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTEADLESSMDKIETINFHEEKDVYGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNVHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFDDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPHVILVHGEQNEMSRLKAALQREYEDDPSTAMEIHNPRNTVAVELYFRGEKTAKVMGALAMETPKPGQKLSGVLVKRNFNYHMLDPCDLSKYTDMSISQVIQRQSVYYSASLPTLKHLLTQIAGTLDIID-----DKKLRVFKNVDLTIEGKIVTMEWLATPVNDMYADAVLTALLQAETMDSNPKMLTAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLSLDVSCKEDEVFQQIVQTAVSKLHQSL 682          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|380012076|ref|XP_003690115.1| (PREDICTED: cleavage and polyadenylation specificity factor 73 [Apis florea] >gi|571576591|ref|XP_006563220.1| PREDICTED: cleavage and polyadenylation specificity factor 73 [Apis mellifera] >gi|572265349|ref|XP_006610812.1| PREDICTED: cleavage and polyadenylation specificity factor 73-like [Apis dorsata] >gi|1035615068|ref|XP_016915300.1| PREDICTED: cleavage and polyadenylation specificity factor 73 [Apis cerana] >gi|1241835009|gb|PBC31295.1| Cleavage and polyadenylation specificity factor subunit [Apis cerana cerana])

HSP 1 Score: 1088.56 bits (2814), Expect = 0.000e+0
Identity = 501/672 (74.55%), Postives = 593/672 (88.24%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEKP-RYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALPFVD++EAD+IDLLLISHFHLDH GALPWFLQKT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLETSM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW+ HPELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR+LKPPHV+LVHGE NEM RLK+AL REYE DP+T ++ +NPRNTVAV+LYFRGEK AKV+G LAME P     +SGVLVKRNFNYH+LA  DL KYTDM++S V QRQSVY+  S  +L+ L++Q++G+LE+VD      K +R F  ID+  + ++VT+EW+A+PVNDMYAD+VL+A+LQAE +E+P + +P   K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ +L+V   ED+  Q I+QTA +KL  SL
Sbjct:   13 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRSLKPPHVVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAMETPKPGQTLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLLVLKHLLTQIAGNLEVVD-----DKKLRVFKNIDVTIDGKIVTMEWVATPVNDMYADSVLTAILQAEMMEQPLKVLPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKEDETFQQIVQTAVTKLHQSL 679          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|815919593|ref|XP_012244772.1| (cleavage and polyadenylation specificity factor 73 [Bombus impatiens])

HSP 1 Score: 1087.79 bits (2812), Expect = 0.000e+0
Identity = 501/672 (74.55%), Postives = 592/672 (88.10%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEK-PRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALPFVD++EAD+IDLLLISHFHLDH GALPWFLQKT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLETSM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW+ HPELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEM RLK+AL REYE DP+T ++ +NPRNTVAV+LYFRGEK AKV+G LAME P     +SGVLVKRNFNYH+LA  DL KYTDM++S V QRQS+Y+  S  +L+ L++Q++G+LE+VD      K +R F  ID+  + ++VT+EWIA+PVNDMYAD+VL+A+LQAE +E+ P+ +P   K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ +L+V   ED+  Q I+QTA +KL  SL
Sbjct:   13 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPHVVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAMETPKPGQTLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSIYFSASLPVLKHLLTQIAGNLEVVD-----DKKLRVFKNIDVTIDGKIVTMEWIATPVNDMYADSVLTAILQAEMMEQPPKVLPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKEDETFQQIVQTAVTKLHQSL 679          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|1061122784|ref|XP_017886856.1| (PREDICTED: cleavage and polyadenylation specificity factor 73 [Ceratina calcarata])

HSP 1 Score: 1087.4 bits (2811), Expect = 0.000e+0
Identity = 499/672 (74.26%), Postives = 593/672 (88.24%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEK-PRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALPFVD++EAD+IDLLLISHFHLDH GALPWFLQKT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLETSM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW+ HPELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEM RLK+AL REYE DP+T ++ +NPRNTVAV+LYFRGEK AKV+G LAME P     +SGVLVKRNFNYH+LA  DL KYTDM++S V QRQSV++  +  +L+ L++Q++G+LE++D      K +R F  +D+  + ++VT+EWIA+PVNDMYAD+VL+A+LQAE +E+ P+ +P   K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ +L+V C ED+  Q I+QTA +KL  SL
Sbjct:   13 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPHVVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAMETPKTGQTLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVHFSAALPVLKHLLTQIAGNLEMID-----DKKLRIFKNVDVTIDGKIVTIEWIATPVNDMYADSVLTAILQAEMMEQLPKVLPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTCKEDETFQQIVQTAVTKLHQSL 679          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|1059208643|ref|XP_017766885.1| (PREDICTED: cleavage and polyadenylation specificity factor 73 [Eufriesea mexicana] >gi|1026574013|gb|OAD60895.1| Cleavage and polyadenylation specificity factor subunit 3 [Eufriesea mexicana])

HSP 1 Score: 1087.4 bits (2811), Expect = 0.000e+0
Identity = 500/672 (74.40%), Postives = 592/672 (88.10%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEK-PRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALPFVD++EAD+IDLLLISHFHLDH GALPWFLQKT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLETSM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW+ HPELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEM RLK+AL REYE DP+T ++ +NPRNTVA++LYFRGEK AKV+G LAME P     +SGVLVKRNFNYH+LA  DL KYTDM++S V QRQSVY+  S  +L+ L++Q++G+LE+VD      K +R F  ID+  + ++VT+EW+A+PVNDMYAD+VL+A+LQAE +E+ P+ +P   K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ +L+V   ED+  Q I+QTA +KL  SL
Sbjct:   13 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPHVVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAIELYFRGEKTAKVMGTLAMETPKPGQTLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQIAGNLEVVD-----DKKLRVFKNIDVTIDGKIVTMEWVATPVNDMYADSVLTAILQAEMMEQPPKILPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKEDETFQQIVQTAVTKLHQSL 679          
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|383861262|ref|XP_003706105.1| (PREDICTED: cleavage and polyadenylation specificity factor 73 [Megachile rotundata])

HSP 1 Score: 1087.02 bits (2810), Expect = 0.000e+0
Identity = 501/672 (74.55%), Postives = 592/672 (88.10%), Query Frame = 0
Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEK-PRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALPFVD++EAD+IDLLLISHFHLDH GALPWFLQKT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLETSM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW+ HPELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEM RLK+AL REYE DP+T ++ +NPRNTVAV+LYFRGEK AKV+G LAME P     +SGVLVKRNFNYH+LA  DL KYTDM++S V QRQSVY+  S  +L+ L++Q++G+LE++D      K +R F  ID+  + ++VT+EWIA+PVNDMYAD+VL+A+LQAE +E+ P+ +P   K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ +L+V   ED+  Q I+QTA +KL  SL
Sbjct:   13 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPHVVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAMETPKPGQTLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQIAGNLEVID-----DKKLRVFKNIDVTIDGKIVTMEWIATPVNDMYADSVLTAILQAEMMEQPPKILPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKEDETFQQIVQTAVTKLHQSL 679          
The following BLAST results are available for this feature:
BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 4
Match NameE-valueIdentityDescription
EMLSAG000000072820.000e+080.39supercontig:LSalAtl2s:LSalAtl2s409:129273:131364:-... [more]
EMLSAG000000000102.430e-10534.78supercontig:LSalAtl2s:LSalAtl2s1003:5798:7615:-1 g... [more]
EMLSAG000000118434.177e-3527.60supercontig:LSalAtl2s:LSalAtl2s831:281816:286361:1... [more]
EMLSAG000000113152.971e-1519.79supercontig:LSalAtl2s:LSalAtl2s77:664263:677061:-1... [more]
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BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|74947821|sp|Q9VE51.2|CPSF3_DROME0.000e+067.16RecName: Full=Cleavage and polyadenylation specifi... [more]
gi|18202362|sp|P79101.1|CPSF3_BOVIN0.000e+066.22RecName: Full=Cleavage and polyadenylation specifi... [more]
gi|341940395|sp|Q9QXK7.2|CPSF3_MOUSE0.000e+065.93RecName: Full=Cleavage and polyadenylation specifi... [more]
gi|18203503|sp|Q9UKF6.1|CPSF3_HUMAN0.000e+065.93RecName: Full=Cleavage and polyadenylation specifi... [more]
gi|75262219|sp|Q9C952.1|CPSF3_ARATH0.000e+053.93RecName: Full=Cleavage and polyadenylation specifi... [more]
gi|74860395|sp|Q86A79.1|CPSF3_DICDI0.000e+053.02RecName: Full=Cleavage and polyadenylation specifi... [more]
gi|74703664|sp|Q4PEJ3.1|YSH1_USTMA0.000e+050.17RecName: Full=Endoribonuclease YSH1; AltName: Full... [more]
gi|384872669|sp|O13794.2|YSH1_SCHPO0.000e+043.97RecName: Full=Endoribonuclease ysh1; AltName: Full... [more]
gi|223634672|sp|Q6C2Z7.2|YSH1_YARLI0.000e+052.93RecName: Full=Endoribonuclease YSH1; AltName: Full... [more]
gi|442570103|sp|Q74ZC0.2|YSH1_ASHGO0.000e+045.62RecName: Full=Endoribonuclease YSH1; AltName: Full... [more]

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BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325300675|ref|XP_023331965.1|0.000e+078.90cleavage and polyadenylation specificity factor 73... [more]
gi|307177772|gb|EFN66769.1|0.000e+074.11Cleavage and polyadenylation specificity factor su... [more]
gi|815791278|ref|XP_012216216.1|0.000e+073.96PREDICTED: uncharacterized protein LOC105668415 is... [more]
gi|1339088170|ref|XP_023705187.1|0.000e+074.70cleavage and polyadenylation specificity factor 73... [more]
gi|1227103194|gb|OXU26288.1|0.000e+075.15hypothetical protein TSAR_012561 [Trichomalopsis s... [more]
gi|380012076|ref|XP_003690115.1|0.000e+074.55PREDICTED: cleavage and polyadenylation specificit... [more]
gi|815919593|ref|XP_012244772.1|0.000e+074.55cleavage and polyadenylation specificity factor 73... [more]
gi|1061122784|ref|XP_017886856.1|0.000e+074.26PREDICTED: cleavage and polyadenylation specificit... [more]
gi|1059208643|ref|XP_017766885.1|0.000e+074.40PREDICTED: cleavage and polyadenylation specificit... [more]
gi|383861262|ref|XP_003706105.1|0.000e+074.55PREDICTED: cleavage and polyadenylation specificit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold495_size155559supercontigscaffold495_size155559:23744..25822 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold495_size155559-processed-gene-0.4-mRNA-1snap_masked-scaffold495_size155559-processed-gene-0.4-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold495_size155559:23744..25822+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold495_size155559-processed-gene-0.4 ID=snap_masked-scaffold495_size155559-processed-gene-0.4|Name=cleavage and polyadenylation specificity factor subunit 3|organism=Tigriopus kingsejongensis|type=gene|length=2079bp|location=Sequence derived from alignment at scaffold495_size155559:23744..25822+ (Tigriopus kingsejongensis)
ATGGCCCTCAAGCGGGCCCACTCCCCGGGCTTCATCGTGGAGAGCACCTC GAGCGATGAGCAGGACAAGATGACGATCCGCCCCCTGGGGGCGGGTCAGG AGGTGGGCCGCTCCTGTCACATCCTCGAGTTCAAGGACAAGCGCGTTCTC CTGGACTGCGGCATCCACCCGGGCCTCAACGGCATGGATGCCCTGCCCTT CGTGGACATGATCGAGGCCGACAAGATCGACCTGCTGCTCATCTCGCATT TCCATCTGGATCACGCCGGAGCCTTGCCCTGGTTCCTCCAGAAGACCACG TTCAAGGGCAAGTGCTTCATGACGCACGCCACCAAGGCCATCTACCGCTG GCTCCTCTCGGACTTCATCAAGGTGTCCAACATCGCCACGGAGCAGATGC TCTACTCGGAGCAGGACCTGGAGACCAGCATGGAGAAGATCGACACGCTC AACTTCCACGAGGAGAAGGAGGTGAACGGCATCAAGTTCTGGGCCTACAA CGCCGGCCACGTCCTCGGCGCGGCCATGTTCATGATCGAAATCGCGGGCG TGCGCGTGCTGTACACCGGCGACTTCTCCCGCGAGGAGGATCGCCATCTC ATGGCCGCGGAGCTGCCCACCCTCAGGCCGGACGTGCTCATCGTGGAGGC CACCTACGGCACGCACATCCACGAGAAGCGCGAGGATCGCGAGCACCGCT TCACGTCCACCATCCACGAGATCGTGAACCGGGGCGGGCGCTGCCTCATA CCGGTGTTCGCCCTGGGTCGGGCCCAGGAGCTGCTGCTCATCTTGGACGA GTACTGGGCCGCGCATCCGGAGCTGCACGAGATCCCCATCTACTACGCCT CCTCCCTGGCCAAGAAGTGCATGGCCGTCTACCAGACCTTCGTGAACGCC ATGAACGACAAGATTCGACGCCAGATCGCCGTGAGCAACCCGTTCGTCTT CAAGCACATCTCCAATCTCAAGGGCATCGACCACTTTGACGACATCGGCC CCTGCGTGATCCTGGCCTCGCCGGGCATGATGCAGAGCGGTCTTTCGCGG GAGCTCTTCGAGAGCTGGTGCACGGACTCCAAGAATGGCTGCATCGTGGC CGGCTACTGCGTGGAGGGCACCCTGGCCAAGCATATCCTCTCCGAGCCCG AGGAGATCACGGCCATGAACGGACAGAGGCTGCCGCTCAAGCTCCAAGTG AGCTACATCTCGTTCTCGGCCCACACCGACTACAAGCAGACCAGTGGATT CATCCGGGCTCTCAAGCCGCCCCACGTGATCCTCGTCCACGGCGAGGCCA ACGAGATGAGCCGGCTCAAGTCGGCCTTGATCCGCGAGTACGAGGCGGAT CCGGACACCAATATTGACTTCTACAATCCTCGCAACACCGTGGCCGTCGA CCTCTACTTCCGCGGCGAGAAGATGGCCAAGGTGGTGGGCAATCTGGCCA TGGAGAAGCCCATCGACGACCACCGGGTGTCGGGCGTGCTGGTCAAGCGC AACTTCAACTACCATATCCTGGCCGCCAACGACCTCCAGAAGTACACGGA TATGACGATCTCGACTGTGACGCAGCGACAGTCGGTCTACTACGAGGGCA GCTTTCAGCTCCTCCAGTTCCTCGTGTCCCAACTCTCCGGCGACCTGGAG CTGGTAGACACGGAGCAGGAGAGCAAGAAGATCATCCGGGCCTTCGGCGC CATCGACATCGTGCACGAGAAGCGCATGGTCACCTTGGAGTGGATCGCCA GTCCGGTCAACGATATGTACGCGGATGCCGTGCTTTCGGCCGTTCTCCAG GCCGAGTCGATCGAGAAGCCCCGCTACATCCCCACCAACGCCAAGGTGGA CATGATGCATTTCAAGGAGTGCCTCTTGGAAATGCTCCAAGACATGTTTG GCGAGGAATCCGTGCCCACCACCTTCAGTGGAGATCGCTTCGAGATCACG GTCGAGTCCAAGAAGGCCCACATCGACATCGGCAGTCTGGACGTGAAATG CCCCGAGGACGACATGCTCCAGAACATCATTCAAACGGCGTGCTCCAAAC TCAAGCTCTCGCTAATGTTGGATGAGTGA
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Synonyms
The feature 'cleavage and polyadenylation specificity factor subunit 3' has the following synonyms
Synonym
Tk09235
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