h2a_astru ame: full, snap_masked-scaffold791_size96783-processed-gene-0.7 (gene) Tigriopus kingsejongensis

Overview
Nameh2a_astru ame: full
Unique Namesnap_masked-scaffold791_size96783-processed-gene-0.7
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000005641 (supercontig:LSalAtl2s:LSalAtl2s303:362466:370455:1 gene:EMLSAG00000005641 transcript:EMLSAT00000005641 description:"maker-LSalAtl2s303-augustus-gene-3.23")

HSP 1 Score: 191.045 bits (484), Expect = 7.909e-58
Identity = 92/108 (85.19%), Postives = 97/108 (89.81%), Query Frame = 0 
Query:   16 SRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123
            SR SRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL G TIA GG LPNIQA+L  KK A K
Sbjct:  576 SRXSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGXTIAQGGXLPNIQALLFLKKYANK 683
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BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000012511 (supercontig:LSalAtl2s:LSalAtl2s921:217466:218531:-1 gene:EMLSAG00000012511 transcript:EMLSAT00000012511 description:"maker-LSalAtl2s921-augustus-gene-1.59")

HSP 1 Score: 169.474 bits (428), Expect = 7.767e-56
Identity = 94/104 (90.38%), Postives = 99/104 (95.19%), Query Frame = 0 
Query:   17 RSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKS 120
            RSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA+ +EYLAAE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKS
Sbjct:   27 RSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAXLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKS 130
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BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000001108 (supercontig:LSalAtl2s:LSalAtl2s1185:74095:74469:1 gene:EMLSAG00000001108 transcript:EMLSAT00000001108 description:"augustus_masked-LSalAtl2s1185-processed-gene-0.1")

HSP 1 Score: 160.999 bits (406), Expect = 1.017e-52
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 0 
Query:   16 SRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122
            SRSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++ E LAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GV IA GGVLPNIQAVLLPKK+ K
Sbjct:   16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVXEXLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVXIAQGGVLPNIQAVLLPKKTEK 122
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BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000008130 (supercontig:LSalAtl2s:LSalAtl2s484:362061:414899:-1 gene:EMLSAG00000008130 transcript:EMLSAT00000008130 description:"augustus_masked-LSalAtl2s484-processed-gene-3.0")

HSP 1 Score: 146.747 bits (369), Expect = 8.001e-47
Identity = 73/122 (59.84%), Postives = 82/122 (67.21%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122
              + GKGG     SK  SSR GLQ PVGR HR LRKG YA+ VGA  PVYLA++M  L  EVLE  GN + DN   RI+PRHL LAIRNDEEL KLL   +I  G + PNI AVLLPKK+ K
Sbjct:   14 FQSSGKGGNVGGDSKYCSSRTGLQLPVGRFHRFLRKGYYAESVGANTPVYLAAVMYCLTTEVLESXGNXSCDNTNTRIIPRHLLLAIRNDEELKKLLASXSILQGSIXPNIXAVLLPKKNEK 135
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BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000007561 (supercontig:LSalAtl2s:LSalAtl2s436:406900:407148:1 gene:EMLSAG00000007561 transcript:EMLSAT00000007561 description:"augustus_masked-LSalAtl2s436-processed-gene-4.1")

HSP 1 Score: 132.494 bits (332), Expect = 4.813e-42
Identity = 67/80 (83.75%), Postives = 72/80 (90.00%), Query Frame = 0 
Query:   43 VGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122
            +GAGAPVYLA++ME LAAEVLELAGNAA DNK  RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLL KK+ K
Sbjct:    1 MGAGAPVYLAAVMEXLAAEVLELAGNAARDNKXTRIIPRHLQLAIRNDEELNKLLVGVTIAQGGVLPNIQAVLLSKKTEK 80
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BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000003537 (supercontig:LSalAtl2s:LSalAtl2s193:353311:359396:-1 gene:EMLSAG00000003537 transcript:EMLSAT00000003537 description:"augustus-LSalAtl2s193-processed-gene-3.2")

HSP 1 Score: 124.405 bits (311), Expect = 1.076e-37
Identity = 62/88 (70.45%), Postives = 69/88 (78.41%), Query Frame = 0 
Query:   35 RKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122
            RKGNY + VGAGAP+YL +++EYLAAEVLEL GNAA D++KARI   HLQL I ND ELNKLL G TIA GGVLPNIQAV  P K  K
Sbjct:   75 RKGNYTECVGAGAPIYLTAVIEYLAAEVLELVGNAARDDRKARIFTLHLQLVICNDGELNKLLAGETIAQGGVLPNIQAVTWPYKMDK 162
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BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000001981 (supercontig:LSalAtl2s:LSalAtl2s1352:73992:74474:1 gene:EMLSAG00000001981 transcript:EMLSAT00000001981 description:"augustus_masked-LSalAtl2s1352-processed-gene-0.2")

HSP 1 Score: 114.005 bits (284), Expect = 1.017e-33
Identity = 71/145 (48.97%), Postives = 85/145 (58.62%), Query Frame = 0 
Query:    8 GKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAK-RVGAGAPVYLASLMEYLAAE--------------------------------VLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKK 119
            GKAK  + SRS+RAGLQFPVGRIHR L+    +  RVGA A VY A+++E L AE                                VLELAGNA+ D K  RI PRHLQLAIR DEEL+ L++  TIAGGGV+P+I   L+ KK
Sbjct:   11 GKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEXLTAEXIAMIIMIDKYYSLKDIAIIFILFNSSTFIHQVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKA-TIAGGGVIPHIHKSLIGKK 154
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BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000008824 (supercontig:LSalAtl2s:LSalAtl2s54:205060:215917:-1 gene:EMLSAG00000008824 transcript:EMLSAT00000008824 description:"snap_masked-LSalAtl2s54-processed-gene-2.1")

HSP 1 Score: 108.997 bits (271), Expect = 2.530e-32
Identity = 55/94 (58.51%), Postives = 68/94 (72.34%), Query Frame = 0 
Query:   29 RIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122
            +I RLLRK N  +R+GAG  +YL ++MEYLAAEVLELAGNAA DN+K RI+  HLQL I NDE+L K+L   TI  G +L NIQ V + K + K
Sbjct:   15 KIDRLLRKINSGERIGAGTSIYLVAVMEYLAAEVLELAGNAAHDNRKTRIIYIHLQLVICNDEKLYKML-ATTITKGVILHNIQTVFIYKNNEK 107
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BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000003259 (supercontig:LSalAtl2s:LSalAtl2s1791:770:1305:-1 gene:EMLSAG00000003259 transcript:EMLSAT00000003259 description:"snap_masked-LSalAtl2s1791-processed-gene-0.2")

HSP 1 Score: 97.4413 bits (241), Expect = 2.792e-28
Identity = 47/57 (82.46%), Postives = 50/57 (87.72%), Query Frame = 0 
Query:   16 SRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATD 72
            SRSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLE       D
Sbjct:   16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLEFKEEFFDD 72
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BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000012597 (supercontig:LSalAtl2s:LSalAtl2s944:131989:132225:-1 gene:EMLSAG00000012597 transcript:EMLSAT00000012597 description:"augustus_masked-LSalAtl2s944-processed-gene-0.3")

HSP 1 Score: 95.1301 bits (235), Expect = 3.336e-27
Identity = 48/77 (62.34%), Postives = 54/77 (70.13%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKAR 77
            M  +GKG KAK  S+S SSR GLQF V RIHRLLRK +   RVGAGA VYL  + EYL AE+LE+  N A DNKK R
Sbjct:    1 MRGQGKGSKAKGKSRSCSSRDGLQFSVKRIHRLLRKDSTTDRVGAGAFVYLVVVQEYLTAEILEMVENTARDNKKTR 77
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BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|122044770|sp|P02269.2|H2A_ASTRU (RecName: Full=Histone H2A)

HSP 1 Score: 212.231 bits (539), Expect = 1.661e-71
Identity = 105/122 (86.07%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122
            MS RGKGGKA+  +KSRSSRAGLQFPVGR+HR LRKGNYA+RVGAGAPVYLA++MEYLAAE+LELAGNAA DNKK RI PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+AK
Sbjct:    1 MSGRGKGGKARAKAKSRSSRAGLQFPVGRVHRFLRKGNYAERVGAGAPVYLAAVMEYLAAEILELAGNAARDNKKTRINPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTAK 122
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BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|59799575|sp|P69141.2|H2A_STRPU (RecName: Full=Histone H2A, embryonic >gi|59799589|sp|P69142.2|H2AE_PSAMI RecName: Full=Histone H2A, embryonic)

HSP 1 Score: 207.223 bits (526), Expect = 2.030e-69
Identity = 99/122 (81.15%), Postives = 112/122 (91.80%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122
            MS RGK GKA+  +K+RSSRAGLQFPVGR+HR LRKGNYAKRVG GAPVY+A+++EYL AE+LELAGNAA DNKK+RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+AK
Sbjct:    1 MSGRGKSGKARTKAKTRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAK 122
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BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|122005|sp|P13630.2|H2A_PARLI (RecName: Full=Histone H2A)

HSP 1 Score: 206.068 bits (523), Expect = 4.188e-69
Identity = 99/122 (81.15%), Postives = 111/122 (90.98%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122
            MS RGK GKA+  +KSRSSRAGLQFPVGR+HR LRKGNYAKRVG GAPVY+A+++EYL AE+LELAGNAA DNKK+RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ K
Sbjct:    1 MSGRGKSGKARTKAKSRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGK 122
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BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|462233|sp|P35061.2|H2A_ACRFO (RecName: Full=Histone H2A)

HSP 1 Score: 206.068 bits (523), Expect = 5.817e-69
Identity = 101/124 (81.45%), Postives = 113/124 (91.13%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKKE 124
            MS RGKG      SKSRSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVY+A+++EYL+AE+LELAGNAA DNKK+RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK+
Sbjct:    1 MSGRGKGKAQGTKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTEKKQ 124
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BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|121987|sp|P16886.2|H2AL_STRPU (RecName: Full=Late histone H2A.L3)

HSP 1 Score: 206.068 bits (523), Expect = 5.879e-69
Identity = 101/123 (82.11%), Postives = 114/123 (92.68%), Query Frame = 0 
Query:    1 MSARGKG-GKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122
            MS RGKG GKA+  +KSRS+RAGLQFPVGR+HR LRKGNYA+RVGAGAPVYLA+++EYLAAE+LELAGNAA DNKK RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK++K
Sbjct:    1 MSGRGKGAGKARAKAKSRSARAGLQFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTSK 123
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BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|74752099|sp|Q96QV6.3|H2A1A_HUMAN (RecName: Full=Histone H2A type 1-A; AltName: Full=Histone H2A/r)

HSP 1 Score: 204.912 bits (520), Expect = 1.720e-68
Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = 0 
Query:    1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKS 120
            MS RGK GGKA+  SKSRSSRAGLQFPVGRIHRLLRKGNYA+R+GAGAPVYLA+++EYL AE+LELAGNA+ DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+
Sbjct:    1 MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
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BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|122004|sp|P02264.2|H2A_ONCMY (RecName: Full=Histone H2A)

HSP 1 Score: 204.142 bits (518), Expect = 3.834e-68
Identity = 101/123 (82.11%), Postives = 113/123 (91.87%), Query Frame = 0 
Query:    1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122
            MS RGK GGKA+  +K+RSSRAGLQFPVGR+HRLLRKGNYA+RVGAGAPVYLA+++EYL AE+LELAGNAA DNKK RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ K
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTEK 123
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BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|121993|sp|P27661.2|H2AX_MOUSE (RecName: Full=Histone H2AX; Short=H2a/x; AltName: Full=Histone H2A.X)

HSP 1 Score: 203.756 bits (517), Expect = 8.503e-68
Identity = 102/122 (83.61%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSA 121
            MS RGK GGKA+  +KSRSSRAGLQFPVGR+HRLLRKG+YA+RVGAGAPVYLA+++EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKS+
Sbjct:    1 MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKSS 122
[Close]
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|74750623|sp|Q8IUE6.3|H2A2B_HUMAN (RecName: Full=Histone H2A type 2-B)

HSP 1 Score: 202.986 bits (515), Expect = 1.028e-67
Identity = 101/121 (83.47%), Postives = 112/121 (92.56%), Query Frame = 0 
Query:    1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKS 120
            MS RGK GGKA+  +KSRSSRAGLQFPVGR+HRLLRKGNYA+RVGAGAPVYLA+++EYL AE+LELAGNAA DNKK RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
[Close]
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|81872175|sp|Q64522.3|H2A2B_MOUSE (RecName: Full=Histone H2A type 2-B; AltName: Full=H2a-613A)

HSP 1 Score: 202.216 bits (513), Expect = 1.859e-67
Identity = 100/121 (82.64%), Postives = 112/121 (92.56%), Query Frame = 0 
Query:    1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKS 120
            MS RGK GGKA+  +KSRSSRAGLQFPVGR+HRLLRKGNYA+RVGAGAPVY+A+++EYL AE+LELAGNAA DNKK RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
[Close]
BLAST of h2a_astru ame: full vs. nr
Match: gi|662208256|ref|XP_008477669.1| (PREDICTED: histone H2A-like [Diaphorina citri] >gi|662217518|ref|XP_008482742.1| PREDICTED: histone H2A-like [Diaphorina citri])

HSP 1 Score: 218.394 bits (555), Expect = 1.772e-71
Identity = 109/123 (88.62%), Postives = 115/123 (93.50%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123
            MS RGKGGKAK  SK+RSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK
Sbjct:    1 MSGRGKGGKAKTKSKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
[Close]
BLAST of h2a_astru ame: full vs. nr
Match: gi|1121115134|ref|XP_019547106.1| (PREDICTED: histone H2A-like [Aedes albopictus] >gi|1121115142|ref|XP_019547109.1| PREDICTED: histone H2A-like [Aedes albopictus] >gi|1121115145|ref|XP_019547110.1| PREDICTED: histone H2A-like [Aedes albopictus] >gi|1000212002|gb|KXJ81677.1| hypothetical protein RP20_CCG018287 [Aedes albopictus])

HSP 1 Score: 216.468 bits (550), Expect = 1.071e-70
Identity = 108/123 (87.80%), Postives = 115/123 (93.50%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123
            MS RGKGGKA+  +KSRSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK
Sbjct:    1 MSGRGKGGKARVKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
[Close]
BLAST of h2a_astru ame: full vs. nr
Match: gi|1321329565|ref|XP_023307652.1| (histone H2A [Lucilia cuprina] >gi|1108464811|emb|CRL07048.1| CLUMA_CG019995, isoform A [Clunio marinus] >gi|1108464820|emb|CRL07057.1| CLUMA_CG019989, isoform A [Clunio marinus] >gi|1108464825|emb|CRL07062.1| CLUMA_CG019997, isoform A [Clunio marinus] >gi|1108464830|emb|CRL07067.1| CLUMA_CG019996, isoform A [Clunio marinus] >gi|1108464833|emb|CRL07070.1| CLUMA_CG019990, isoform A [Clunio marinus])

HSP 1 Score: 214.927 bits (546), Expect = 4.559e-70
Identity = 107/123 (86.99%), Postives = 114/123 (92.68%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123
            MS RGKGGK K  +KSRS+RAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK
Sbjct:    1 MSGRGKGGKVKSKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
[Close]
BLAST of h2a_astru ame: full vs. nr
Match: gi|1005948275|ref|XP_015782447.1| (PREDICTED: histone H2A [Tetranychus urticae] >gi|1005948277|ref|XP_015782448.1| PREDICTED: histone H2A [Tetranychus urticae] >gi|1005958727|ref|XP_015787747.1| PREDICTED: histone H2A [Tetranychus urticae])

HSP 1 Score: 214.927 bits (546), Expect = 4.609e-70
Identity = 108/123 (87.80%), Postives = 114/123 (92.68%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123
            MS RGKGGK K  +KSRSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA+++EYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKS KK
Sbjct:    1 MSGRGKGGKVKSKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSDKK 123
[Close]
BLAST of h2a_astru ame: full vs. nr
Match: gi|162319741|gb|ABX84387.1| (histone H2A, partial [Penaeus monodon])

HSP 1 Score: 214.542 bits (545), Expect = 5.679e-70
Identity = 108/123 (87.80%), Postives = 113/123 (91.87%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123
            MS RG GGK K  SKSRSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK
Sbjct:    1 MSGRGNGGKVKGKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
[Close]
BLAST of h2a_astru ame: full vs. nr
Match: gi|755929542|ref|XP_011311067.1| (PREDICTED: histone H2A-like [Fopius arisanus] >gi|755930864|ref|XP_011313789.1| PREDICTED: histone H2A-like [Fopius arisanus])

HSP 1 Score: 214.542 bits (545), Expect = 6.766e-70
Identity = 106/122 (86.89%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122
            MS RGKGGK K  +K+RSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ K
Sbjct:    1 MSGRGKGGKVKSKAKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 122
[Close]
BLAST of h2a_astru ame: full vs. nr
Match: gi|1121089775|ref|XP_019533532.1| (PREDICTED: histone H2A [Aedes albopictus] >gi|1121161941|ref|XP_019526538.1| PREDICTED: histone H2A [Aedes albopictus])

HSP 1 Score: 214.542 bits (545), Expect = 7.805e-70
Identity = 106/124 (85.48%), Postives = 115/124 (92.74%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKKE 124
            MS+RGKGG AK   KSRSSRAGLQFPVGR HRLLRKGNYA+RVGAGAPVYLA++MEYL+AEVLELAGNAA DNKK+RI+PRHLQLAIRNDEELNKL+ GVTIA GGVLPNIQAVLLPKK+ KKE
Sbjct:    1 MSSRGKGGNAKAKPKSRSSRAGLQFPVGRTHRLLRKGNYAERVGAGAPVYLAAVMEYLSAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLMSGVTIAQGGVLPNIQAVLLPKKTEKKE 124
[Close]
BLAST of h2a_astru ame: full vs. nr
Match: gi|961096484|ref|XP_014773904.1| (PREDICTED: histone H2A-like [Octopus bimaculoides] >gi|918317225|gb|KOF86382.1| hypothetical protein OCBIM_22018720mg [Octopus bimaculoides])

HSP 1 Score: 214.927 bits (546), Expect = 7.966e-70
Identity = 107/121 (88.43%), Postives = 113/121 (93.39%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSA 121
            MS RGKGGK K   KSRSS+AGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK+RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKSA
Sbjct:    1 MSGRGKGGKVKAKPKSRSSKAGLQFPVGRIHRLLRKGNYAQRVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKSA 121
[Close]
BLAST of h2a_astru ame: full vs. nr
Match: gi|1268080066|ref|XP_022710768.1| (histone H2A-like [Varroa jacobsoni])

HSP 1 Score: 213.772 bits (543), Expect = 1.336e-69
Identity = 105/124 (84.68%), Postives = 115/124 (92.74%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKKE 124
            MS RGKGGK+K  +K+RSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA+++EYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ K +
Sbjct:    1 MSGRGKGGKSKTKAKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKTQ 124
[Close]
BLAST of h2a_astru ame: full vs. nr
Match: gi|1121089661|ref|XP_019532945.1| (PREDICTED: histone H2A [Aedes albopictus] >gi|1121162063|ref|XP_019526590.1| PREDICTED: histone H2A [Aedes albopictus])

HSP 1 Score: 213.772 bits (543), Expect = 1.558e-69
Identity = 107/123 (86.99%), Postives = 114/123 (92.68%), Query Frame = 0 
Query:    1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123
            MS+RGKGG AK   KSRSSRAGLQFPVGR HRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK+RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK
Sbjct:    1 MSSRGKGGNAKAKPKSRSSRAGLQFPVGRTHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLTGVTIAQGGVLPNIQAVLLPKKTEKK 123
The following BLAST results are available for this feature:
BLAST of h2a_astru ame: full vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 14
Match NameE-valueIdentityDescription
EMLSAG000000056417.909e-5885.19supercontig:LSalAtl2s:LSalAtl2s303:362466:370455:1... [more]
EMLSAG000000125117.767e-5690.38supercontig:LSalAtl2s:LSalAtl2s921:217466:218531:-... [more]
EMLSAG000000011081.017e-5287.85supercontig:LSalAtl2s:LSalAtl2s1185:74095:74469:1 ... [more]
EMLSAG000000081308.001e-4759.84supercontig:LSalAtl2s:LSalAtl2s484:362061:414899:-... [more]
EMLSAG000000075614.813e-4283.75supercontig:LSalAtl2s:LSalAtl2s436:406900:407148:1... [more]
EMLSAG000000035371.076e-3770.45supercontig:LSalAtl2s:LSalAtl2s193:353311:359396:-... [more]
EMLSAG000000019811.017e-3348.97supercontig:LSalAtl2s:LSalAtl2s1352:73992:74474:1 ... [more]
EMLSAG000000088242.530e-3258.51supercontig:LSalAtl2s:LSalAtl2s54:205060:215917:-1... [more]
EMLSAG000000032592.792e-2882.46supercontig:LSalAtl2s:LSalAtl2s1791:770:1305:-1 ge... [more]
EMLSAG000000125973.336e-2762.34supercontig:LSalAtl2s:LSalAtl2s944:131989:132225:-... [more]

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BLAST of h2a_astru ame: full vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|122044770|sp|P02269.2|H2A_ASTRU1.661e-7186.07RecName: Full=Histone H2A[more]
gi|59799575|sp|P69141.2|H2A_STRPU2.030e-6981.15RecName: Full=Histone H2A, embryonic >gi|59799589|... [more]
gi|122005|sp|P13630.2|H2A_PARLI4.188e-6981.15RecName: Full=Histone H2A[more]
gi|462233|sp|P35061.2|H2A_ACRFO5.817e-6981.45RecName: Full=Histone H2A[more]
gi|121987|sp|P16886.2|H2AL_STRPU5.879e-6982.11RecName: Full=Late histone H2A.L3[more]
gi|74752099|sp|Q96QV6.3|H2A1A_HUMAN1.720e-6884.30RecName: Full=Histone H2A type 1-A; AltName: Full=... [more]
gi|122004|sp|P02264.2|H2A_ONCMY3.834e-6882.11RecName: Full=Histone H2A[more]
gi|121993|sp|P27661.2|H2AX_MOUSE8.503e-6883.61RecName: Full=Histone H2AX; Short=H2a/x; AltName: ... [more]
gi|74750623|sp|Q8IUE6.3|H2A2B_HUMAN1.028e-6783.47RecName: Full=Histone H2A type 2-B[more]
gi|81872175|sp|Q64522.3|H2A2B_MOUSE1.859e-6782.64RecName: Full=Histone H2A type 2-B; AltName: Full=... [more]

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BLAST of h2a_astru ame: full vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|662208256|ref|XP_008477669.1|1.772e-7188.62PREDICTED: histone H2A-like [Diaphorina citri] >gi... [more]
gi|1121115134|ref|XP_019547106.1|1.071e-7087.80PREDICTED: histone H2A-like [Aedes albopictus] >gi... [more]
gi|1321329565|ref|XP_023307652.1|4.559e-7086.99histone H2A [Lucilia cuprina] >gi|1108464811|emb|C... [more]
gi|1005948275|ref|XP_015782447.1|4.609e-7087.80PREDICTED: histone H2A [Tetranychus urticae] >gi|1... [more]
gi|162319741|gb|ABX84387.1|5.679e-7087.80histone H2A, partial [Penaeus monodon][more]
gi|755929542|ref|XP_011311067.1|6.766e-7086.89PREDICTED: histone H2A-like [Fopius arisanus] >gi|... [more]
gi|1121089775|ref|XP_019533532.1|7.805e-7085.48PREDICTED: histone H2A [Aedes albopictus] >gi|1121... [more]
gi|961096484|ref|XP_014773904.1|7.966e-7088.43PREDICTED: histone H2A-like [Octopus bimaculoides]... [more]
gi|1268080066|ref|XP_022710768.1|1.336e-6984.68histone H2A-like [Varroa jacobsoni][more]
gi|1121089661|ref|XP_019532945.1|1.558e-6986.99PREDICTED: histone H2A [Aedes albopictus] >gi|1121... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold791_size96783supercontigscaffold791_size96783:75107..75481 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:nucleosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold791_size96783-processed-gene-0.7-mRNA-1snap_masked-scaffold791_size96783-processed-gene-0.7-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold791_size96783:75107..75481+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold791_size96783-processed-gene-0.7 ID=snap_masked-scaffold791_size96783-processed-gene-0.7|Name=h2a_astru ame: full|organism=Tigriopus kingsejongensis|type=gene|length=375bp|location=Sequence derived from alignment at scaffold791_size96783:75107..75481+ (Tigriopus kingsejongensis)
ATGTCTGCCCGAGGTAAAGGAGGCAAGGCCAAAGAGCCTTCCAAGAGTCG
TTCGAGCCGAGCCGGCCTCCAATTCCCTGTTGGCCGCATTCACCGTCTTC
TGCGTAAGGGAAACTATGCCAAGCGGGTGGGAGCCGGAGCGCCTGTCTAC
CTGGCTTCGCTGATGGAATACCTGGCCGCCGAGGTGCTCGAGCTGGCCGG
CAATGCGGCCACCGACAACAAGAAGGCGCGCATCGTGCCGCGCCACCTTC
AATTGGCCATCCGGAACGACGAGGAACTCAATAAGCTTCTCCAAGGCGTG
ACCATCGCCGGGGGTGGCGTCTTGCCTAACATCCAGGCTGTCCTCTTGCC
CAAGAAGTCGGCCAAGAAGGAATAA
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Synonyms
The feature 'h2a_astru ame: full' has the following synonyms
Synonym
Tk03151
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