isoform o, snap_masked-scaffold903_size83255-processed-gene-0.7 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of isoform o vs. L. salmonis genes
Match: EMLSAG00000006195 (supercontig:LSalAtl2s:LSalAtl2s339:168354:194952:-1 gene:EMLSAG00000006195 transcript:EMLSAT00000006195 description:"maker-LSalAtl2s339-augustus-gene-2.20") HSP 1 Score: 489.574 bits (1259), Expect = 4.075e-169 Identity = 261/491 (53.16%), Postives = 329/491 (67.01%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFND----MSG--------------------------RIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADA-RANAERMALEKQMER-----DR-QEAQFMYEEEEQQYYNQREKPMYN----RDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYLT 574 NYR+EEKKILD++L VYD R+RP G+N++D ++V VN++VRSF IDDVKM EYS QIT RQQWND RL F D M G +I+YLT+ DS KVWM DTFF NEK G+FHNI+Q NLY+RVFPNGD+LYSIRVSLT +C M L LFPLD QTC L VASYG+T +DL+Y WK +PVQ V+NL LPGGF+L + + +C+VK ATG YSCL V++TF RQ+S+Y++TIYIP MIV+VSWMSFW+DHK+ PARVSL IT LLAMSTT +SIN+SLPPVAYTKAIDVW +CVTFVF ALLEYALVNYA+R+DA RA ++ A E+++E+ +R ++ F + Y++ E ++ +DPLMRRI G+ +I LL E+P V + ++ R AK+IDVISR +FP +FA FNI+YWSYYLT Sbjct: 40 NYRQEEKKILDSVLGPDVYDKRIRPSGLNSTDSASLVTVNIFVRSFSNIDDVKM-----------EYSFQITLRQQWNDGRLRFKDKLLSMEGIVIDFDFNIIPFYPDAASSGGLFQKDKIRYLTMTDSSKVWMXDTFFXNEKIGRFHNILQDNLYVRVFPNGDVLYSIRVSLTCACSMHLALFPLDKQTCNLDVASYGWTMNDLIYQWKETNPVQMVANLSLPGGFKLDGFTNHNCDVKXATGSYSCLRVEITFARQLSFYVLTIYIPCFMIVLVSWMSFWIDHKAVPARVSLGITXLLAMSTTQASINSSLPPVAYTKAIDVWCGVCVTFVFSALLEYALVNYASRSDAQRAAKQKEAKERELEQCAFSTERIEDGGFPLSMVNRLPYDRTENMSHSHFLFKDPLMRRIEGAPMI-PPGGLLQNEIPLQ---------------VRRNPISDWCQRFQFRAKKIDVISRFLFPSTFAFFNILYWSYYLT 503
BLAST of isoform o vs. L. salmonis genes
Match: EMLSAG00000004920 (supercontig:LSalAtl2s:LSalAtl2s259:1063168:1099810:-1 gene:EMLSAG00000004920 transcript:EMLSAT00000004920 description:"maker-LSalAtl2s259-augustus-gene-11.12") HSP 1 Score: 412.535 bits (1059), Expect = 6.345e-142 Identity = 211/371 (56.87%), Postives = 254/371 (68.46%), Query Frame = 0 Query: 220 LQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEA-----QFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFK-DQNG----RAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYLTMSYYST 580 + DS+KVWMPDTFFRNEK G+FHNIIQPNLYIRVFPNGDILYSIR+SLTLSCPM+LELFPLDTQTC+LRVASYG+T DD+VY WKVP+PVQFV NLFLPGGF LH + D CNVKTATGEYSCLTV MTF+RQ+SYYIITIYIPTLMIVMVSWMSFWLDHKS+ L + + +S+ E+QME+DR+ F+ +E + + Q + + +RDPL+RRI GS ++R NKLL +ELPRDR G+F+ DQNG + + V SV+ S++ RV EAKRIDVISR+IFPLSF GFN+MYWSYYLT S++S+ Sbjct: 1 MTDSKKVWMPDTFFRNEKEGKFHNIIQPNLYIRVFPNGDILYSIRISLTLSCPMSLELFPLDTQTCFLRVASYGWTVDDVVYNWKVPEPVQFVKNLFLPGGFGLHXFSDAYCNVKTATGEYSCLTVIMTFRRQLSYYIITIYIPTLMIVMVSWMSFWLDHKSSTKHFCLRVRADARANANRASM---------------------------------------------------ERQMEKDRERINDPANNFLIKEMDMR---QNQVQLMSRDPLIRRIEGSNMVRENNKLLFSELPRDRFGRFRIDQNGPDFTQGNPMTVKSVLTSINTRVQSEAKRIDVISRVIFPLSFVGFNVMYWSYYLTRSHFSS 317
BLAST of isoform o vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5") HSP 1 Score: 402.134 bits (1032), Expect = 3.401e-136 Identity = 218/450 (48.44%), Postives = 272/450 (60.44%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAF-NDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 NYR++EK++LD+IL T YD R+RP G N +DGP +NVN+Y+R+ +IDDVKM EYSVQ+TFR+QWND RL + +D G +KYLTL D KVWMPDTFFRNEK + H II PN+Y+R+FPNG+ILYSIR+SLTL+CPM L L+PLD Q C L++ASYG+ DDL+YLWK DPVQ V L LP F L Y C+V T TGEYSCL V++ FKR+ SYY+ITIY+P M+V+VSW+SFWLD + PARVSL +TTLL MST TS IN LPPV+YTKAIDVW+ N R + R + + K + MY + P A I + L A R G+ ++N ++ R AKRIDVISR IFPL FA FN+ YW YYL Sbjct: 7 NYRQKEKQVLDSILGTG-YDKRIRPSGKNDTDGPATINVNIYLRTISRIDDVKM-----------EYSVQVTFREQWNDERLRYYDDTHGHLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYLWKEKDPVQVVPGLHLP-RFTLEQYKSAYCDVTTNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTG-------------KKRNSEYRNNIRVDPXGDLVYKSTTSYPHQYNSMYPHHNI---------LSGGPPNSYNSATPCEIHXPVEHLQA-YANSRNGEIDEKNCNWYCCKTRGLLAKFPSR----AKRIDVISRFIFPLIFAIFNLAYWLYYL 416
BLAST of isoform o vs. L. salmonis genes
Match: EMLSAG00000002530 (supercontig:LSalAtl2s:LSalAtl2s14:125553:213163:-1 gene:EMLSAG00000002530 transcript:EMLSAT00000002530 description:"maker-LSalAtl2s14-augustus-gene-3.12") HSP 1 Score: 248.054 bits (632), Expect = 3.214e-78 Identity = 122/214 (57.01%), Postives = 151/214 (70.56%), Query Frame = 0 Query: 128 REEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYS 341 R++KKILDNIL VYDNR+RP G N +D T++ VNLY+RSF KIDDVKM + L ++ +I +IKYLT+ D++KVWMPDTFFRNEK G+FHNI+ PN+YIR+FPNGD+LYSIRVSLTL+CPM L+L+PLD Q C LRVASYG+TTDDL Y+WK +PVQ V +L LP F L Y+ CN+KT TG S Sbjct: 21 RKKKKILDNILGKDVYDNRIRPSGRNGTDTATIIVVNLYIRSFAKIDDVKMFKTKMFL---LKECREI-----------------AKIKYLTMTDAKKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTDDLQYIWKPSEPVQIVKDLHLP-RFTLEKYISDYCNIKTNTGAGS 213
BLAST of isoform o vs. L. salmonis genes
Match: EMLSAG00000009520 (supercontig:LSalAtl2s:LSalAtl2s612:286575:292619:1 gene:EMLSAG00000009520 transcript:EMLSAT00000009520 description:"maker-LSalAtl2s612-augustus-gene-3.13") HSP 1 Score: 231.106 bits (588), Expect = 1.255e-72 Identity = 115/209 (55.02%), Postives = 144/209 (68.90%), Query Frame = 0 Query: 273 MTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATG-------------------EYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADAR-ANAERMALEKQMERD 461 M L+L+PLD Q C +R+ASYG+TTDDL+Y WK DPVQFV +L LP F+L S+ CN KT TG EYSCL +++ FKR+ SYY++TIY+P+ M+V++SW+SFWLD KS PARV+L +TTLL MST T+ +N SLPPVAYTKAIDVWS CV FVF ALLE+A VNYA+R D R R A+ M+ D Sbjct: 1 MDLKLYPLDRQVCEMRIASYGWTTDDLIYRWKSKDPVQFVQDLNLPR-FKLESFSTSYCNSKTNTGSVILYTEFPIVKLVFFNSGEYSCLKINLVFKREFSYYLLTIYVPSCMLVIISWVSFWLDSKSVPARVALGVTTLLTMSTQTAGVNRSLPPVAYTKAIDVWSGACVIFVFSALLEFAFVNYASRHDRRKGRKSRSAMNYNMDDD 208
BLAST of isoform o vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58") HSP 1 Score: 233.417 bits (594), Expect = 3.709e-70 Identity = 149/460 (32.39%), Postives = 236/460 (51.30%), Query Frame = 0 Query: 132 KILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQN----GRAVNVVVNSV-MNSLSGRVAC----------EAKRIDVI---SRIIFPLSFAGFNIMYWSYYL 573 + + N+LD YD RLRP N P V +L + SF+ I +V M +Y++ + Q W D RL+F+ ++ L+ S K+W+PDTFF N+K+ H++ + N +R+ +G I Y +R + TL+C M L +PLD+Q C + + SYG+T D+V W+ PV V + LP F + + +K ATG Y L++ +R I Y++ Y+P+++IVM+SW+SFW++H++ ARV+L ITT+L M+T ++ + +SLP ++Y KAID++ +C FVF ALLEYA + + KQ E D E Q + R P+ P +R S+ G+ P R + + R N+ +S L GR+ + K +++I SRIIFP+SF FN+ YW +Y+ Sbjct: 82 RTIGNLLDG--YDIRLRP---NFGGDPLYVGFDLTIASFDSISEVSM-----------DYTITMYLNQYWKDERLSFSTEEDKVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWR-QKPVVGVEDAQLPQ-FTIVGWETNERKIKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAASSSS---------------KQPEEDIIELQ-----------DLRMSPI----PSIRNRFNSSSSSGKIDSATGFPPSFRINRSTHHHSIRPSRKNNIKTSSQHKKKLMGRIRKGSAIVKSILPQIKDVNIIDKYSRIIFPVSFLLFNVAYWCFYV 493
BLAST of isoform o vs. L. salmonis genes
Match: EMLSAG00000000919 (supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1 gene:EMLSAG00000000919 transcript:EMLSAT00000000919 description:"maker-LSalAtl2s115-augustus-gene-7.11") HSP 1 Score: 221.09 bits (562), Expect = 4.090e-65 Identity = 109/264 (41.29%), Postives = 164/264 (62.12%), Query Frame = 0 Query: 176 VKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFND-MSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVN 438 V ++S + + M Y+ + F Q W D+RL D M+ + L ++ K+W PD+FF+N K F + PN YI ++ + ILY ++++L LSCPM + +P DTQTC L + S TTDDL++ W P+ + LP EL S C +TG+++CL V FKR++ YY+ Y+PT +IV++SW+SFW+ ++ PARV+L +T+LL +ST ++ SLPPV+Y KAIDV+ + C FVFL+L+EYALVN Sbjct: 27 VTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLEKIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQTCNLEIESISHTTDDLIFTWDKEMPLDVDKGIELPQ-LELISTKSDDCTTVYSTGQFTCLEVVFKFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVN 289
BLAST of isoform o vs. L. salmonis genes
Match: EMLSAG00000010137 (supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 gene:EMLSAG00000010137 transcript:EMLSAT00000010137 description:"snap_masked-LSalAtl2s66-processed-gene-1.3") HSP 1 Score: 210.69 bits (535), Expect = 3.915e-63 Identity = 123/390 (31.54%), Postives = 189/390 (48.46%), Query Frame = 0 Query: 189 MEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDP-----VQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 M+Y RQ+W+D RL+ D+ + + +W P+ FF N K F + PN+ IR+ PNG+ILY +R+ L SC M L +PLDTQ C ++++S+ TT +L+ W DP V +L +P FE+ C+ G YSCL + R I +++I Y+P+++IV +SW+SFW+D PARV+L + TLL +S+ S S+P +Y KAIDVW +C FVF AL+E+ LVNY R D+ + M+ D A + D + I G+N + + ++ +N+ +V +ID + R FP+ F FNI+YW+YY+ Sbjct: 1 MDYVTDTYLRQKWSDSRLSHPDIKSPLDLAXPNLVKAIWKPEVFFPNAKEANFQFVTVPNVLIRIHPNGEILYILRLRLKFSCMMELSRYPLDTQICAMQISSFSKTTKELLLEW---DPTHELSVTVAKDLRMP-QFEMTKITTNRCHETNHMGNYSCLVAEFHLHRSIGFHLIQSYLPSVLIVAISWVSFWMDVDCVPARVTLGVITLLTVSSQVS--GTSVPQTSYVKAIDVWMGVCTAFVFAALVEFTLVNYLWRKDS---------DPYMKFDAMTALATIHAVNATSKRNELVELDQLDSIETGIKND----GDND-------SQKCNGLRQKSKPPMNLRFQAV-------------KIDEVCRFAFPVGFGIFNIIYWAYYI 351
BLAST of isoform o vs. L. salmonis genes
Match: EMLSAG00000002942 (supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-1 gene:EMLSAG00000002942 transcript:EMLSAT00000002942 description:"maker-LSalAtl2s168-augustus-gene-6.6") HSP 1 Score: 201.06 bits (510), Expect = 4.622e-58 Identity = 158/511 (30.92%), Postives = 234/511 (45.79%), Query Frame = 0 Query: 127 RREEKKILDNILDTTV--YDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQD---SRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGF----------------------TTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARA------NAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSA--VIRGENKLLCAELPRDR----------AGQFKDQNGR-AVNVVVNS------VMNSLS------------GRVACE-AKRIDVISRIIFPLSFAGFNIMYWSYY 572 + + KK LD ILD+ + YD R P N T V + LYVRS I+ MV + + RQ W D RL + G ++ + L D + +W P+ +F N K +F + PN+ +R+ P G ILY +R+ L SC M L FPLD Q C + +AS TT +L+ WK P+ + +P FE+ + + C G YSCL + KR + ++++ YIPT++IV++SW+SFW+D +S R +L +TTLL +S+ S + +P V+Y KAID+W C F+F ALLE+ VNY R + + LE Q +D+ E F+ + N+ N + R + S+ V R LL ++R Q D R A+N+ V ++ S S G C+ A +ID SR IFPL F FN++YWSYY Sbjct: 2 QSKHKKALD-ILDSLLQNYDRRATP--TNHIGKATEVAIKLYVRSLGSINPDTMV-------------IDLYLRQHWFDSRL---NHPGLLEPMDLNDPNLVKALWKPEVYFPNAKDAEFQYVTVPNVLVRIDPGGAILYMLRLKLKFSCMMELSKFPLDEQYCTMEIASCKIIIHKGIISTFKNHNFFSLIVSKTTKELILRWKDTKPIDISKEVKMPQ-FEISTVIPSICQETFHIGNYSCLLAQLHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVESVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFVNYMWRRGKKKTMYFGIESGSRILENQ--KDKVE-DFLVPLSQINEDNEESCNQANNVAMERAVKKSSTEVNRRGQVLLMKPTTKNRRKSNFLWKXSKSQGDDAERRTALNMDVEQSNGEVRMLKSSSDDLIKESSISEFGLSHCKLALQIDECSRFIFPLCFCIFNLLYWSYY 489
BLAST of isoform o vs. L. salmonis genes
Match: EMLSAG00000004092 (supercontig:LSalAtl2s:LSalAtl2s217:422807:437258:1 gene:EMLSAG00000004092 transcript:EMLSAT00000004092 description:"augustus_masked-LSalAtl2s217-processed-gene-4.1") HSP 1 Score: 185.652 bits (470), Expect = 3.702e-52 Identity = 151/517 (29.21%), Postives = 236/517 (45.65%), Query Frame = 0 Query: 97 RHHPLPHHQSQPQVSPNGPTKSIKEAVKNYRREEK------KILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCN--VKTATGE--YSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWL----DHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADAR--ANAERMALEKQMERDRQEAQFMYEEEEQQYY-----NQREK----------PMYNRDPLMRRIAGSAVIRGE---NKLL-CAELPRDRAGQFKD-----QNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 +HH P H + TK + + YRR+++ + LD +L YD ++RPQ D P V+VN +RS +D+ K + + + FRQ W D RL +N + Q K+W PDTF N K+ H + PN +IR+ P+G I YS R+++ C M L FPLD+Q C L + S+G D+++Y W P+ L L + L S+ + + + A G+ S + + TF+R+ YY++ IYIP +IV SW++FWL PAR SL T LA+ T S P V Y A+DV+ LC VF AL+E+A +N+ R N E L R +YE + Y+ Q ++ P NR +++ + RG+ +K++ L R Q K ++ R++++ + L R+D +SR +FPL F N++YW+ Y+ Sbjct: 39 QHHAQPPHDHRHHHGNRNKTK--RSSRIFYRRQDELSSRVSRTLDALLSENRYDRQIRPQ---IGDSPIKVSVNFAIRSMGPVDEQKQL-----------FLMDCYFRQYWTDPRLVYNSSKLNELPMNWQXLTKIWRPDTFIINGKNSYLHKMTVPNRFIRISPDGRISYSQRLTVKARCEMDLRKFPLDSQHCPLEIGSFGHGVDEILYNW-TSMPLSMDKKLGL-AQYHLISWNNSAFTRYSRNAGGDQNVSVIALHFTFQRRTGYYLLQIYIPLTLIVCCSWVTFWLIKTEKGGEIPARTSLGGTXXLAIVTIGFG-GKSKPRVGYATALDVFIVLCFMTVFAALIEFAFINFIDTLVRRLKKNDELEELSHLYPRSA-----VYETVSRSYHRSISTGQGDELIDESIITLTPAQNR---WKKVQATVTSRGKPNFSKIIRQLHLEEQRKNQSKSIWLXFRSVRSLDMYQDHYKFLL---------RVDAVSRKLFPLGFFILNLIYWASYI 519
BLAST of isoform o vs. SwissProt
Match: gi|62901525|sp|Q94900.2|GLUCL_DROME (RecName: Full=Glutamate-gated chloride channel; Short=DrosGluCl; Flags: Precursor) HSP 1 Score: 469.929 bits (1208), Expect = 8.907e-161 Identity = 236/450 (52.44%), Postives = 305/450 (67.78%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADA-RANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 N+R +EKK+LD IL YD R+RP G+N +DGP +V +NL+VRS I D+KM EYSVQ+TFR+QW D RL F+D+ GR+KYLTL ++ +VWMPD FF NEK G FHNII PN+YIR+FPNG +LYSIR+SLTL+CPM L+L+PLD Q C LR+ASYG+TT+DLV+LWK DPVQ V NL LP F L +L CN KT TGEYSCL VD+ FKR+ SYY+I IYIP M+V+VSW+SFWLD + PARVSL +TTLL M+T TS IN SLPPV+YTKAIDVW+ +C+TFVF ALLE+ALVNYA+R+ + +AN + +++K+ RD ++A + + + PL+R + E +L C + Q + N + ++ R +KRIDVISRI FPL FA FN++YWS YL Sbjct: 28 NFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVRINLFVRSIMTISDIKM-----------EYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLP-RFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKESMKKK-RRDLEQASL---DAASDLLDTDSNATFAMKPLVRHPGDPLAL--EKRLQC---------EVHMQAPKRPN-CCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYL 449
BLAST of isoform o vs. SwissProt
Match: gi|704000349|sp|G5EBR3.1|GLUCL_CAEEL (RecName: Full=Glutamate-gated chloride channel alpha; AltName: Full=Avermectin-sensitive glutamate-gated chloride channel GluCl alpha; AltName: Full=GluCl alpha; Flags: Precursor) HSP 1 Score: 306.605 bits (784), Expect = 5.078e-97 Identity = 180/465 (38.71%), Postives = 259/465 (55.70%), Query Frame = 0 Query: 116 TKSIKEAVKNYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFN-DMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLF--LPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEA---QFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACE--AKRIDVISRIIFPLSFAGFNIMYWSYY 572 T I ++ + + KIL ++ T+ YD R+RP N GP VV+VN+ +R+ KID V M EYS Q+T R+ W D RL++ G+ ++ L ++WMPDTFF NEK H I +PN+ IR+ +G +LYS+R+SL LSCPM L+ +P+D Q C + +ASY +TT D+ YLWK P+Q L LP F+L + C T TG YSCL + KR+ S+Y++ +YIP+ M+V+VSW+SFW D + PARV+L +TTLL M+ ++ IN+ LPPV+Y KAIDVW C+TF+F ALLE+ALVN+ A + ER A + ER++ E Q ++ + + +NQ EK PL RR +NS +N L + +KR+D+ISR +FP+ F FNI+YWS + Sbjct: 49 TSPIHIPIEQPQTSDSKILAHLF-TSGYDFRVRPPTDN--GGPVVVSVNMLLRTISKIDVVNM-----------EYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPS-FQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFALVNHIAN---KQGVERKA---RTEREKAEIPLLQNLHNDVPTKVFNQEEK--VRTVPLNRR------------------------------------QMNSFLNLLETKTEWNDISKRVDLISRALFPVLFFVFNILYWSRF 454
BLAST of isoform o vs. SwissProt
Match: gi|121580|sp|P24524.1|GLRA3_RAT (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 280.796 bits (717), Expect = 4.623e-87 Identity = 165/442 (37.33%), Postives = 238/442 (53.85%), Query Frame = 0 Query: 134 LDNILD-TTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLD-GSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREK-PMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYY 572 LD ++ T+ YD R+RP N P V N+++ SF I + M+Y V I RQ+WND RLA+++ L +W PD FF NEK FH + N +R+F NG++LYSIR++LTLSCPM L+ FP+D QTC +++ S+G+T +DL++ W+ PVQ L LP F L D C TG+++C+ V +RQ+ YY+I +YIP+L+IV++SW+SFW++ +APARV+L ITT+L M+T +S SLP V+Y KAID+W +C+ FVF ALLEYA VN+ +R R + + E E + + + + + R Y P ++ G V +G N AV V+ S + + AK+ID ISR FPL+F FNI YW Y Sbjct: 47 LDKLMGRTSGYDARIRP---NFKGPPVNVTCNIFINSFGSIAET-----------TMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQ-FLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFALEKFYRFSDTDDEVRESRLSFTAYGMGPCLQAKDG-VVPKGPN--------------------HAVQVMPKSA-DEMRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIY 451
BLAST of isoform o vs. SwissProt
Match: gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 280.026 bits (715), Expect = 9.040e-87 Identity = 165/442 (37.33%), Postives = 238/442 (53.85%), Query Frame = 0 Query: 134 LDNILD-TTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLD-GSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQR-EKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYY 572 LD ++ T+ YD R+RP N P V N+++ SF I + M+Y V I RQ+WND RLA+++ L +W PD FF NEK FH + N +R+F NG++LYSIR++LTLSCPM L+ FP+D QTC +++ S+G+T +DL++ W+ PVQ L LP F L D C TG+++C+ V +RQ+ YY+I +YIP+L+IV++SW+SFW++ +APARV+L ITT+L M+T +S SLP V+Y KAID+W +C+ FVF ALLEYA VN+ +R R + + E E + + + + + R Y P ++ G V +G N AV V+ S + + AK+ID ISR FPL+F FNI YW Y Sbjct: 47 LDKLMGRTSGYDARIRP---NFKGPPVNVTCNIFINSFGSIAET-----------TMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQ-FLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFALEKFYRFSDTDDEVRESRFSFTAYGMGPCLQAKDG-VVPKGPN--------------------HAVQVMPKSP-DEMRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIY 451
BLAST of isoform o vs. SwissProt
Match: gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 276.944 bits (707), Expect = 8.357e-86 Identity = 161/440 (36.59%), Postives = 235/440 (53.41%), Query Frame = 0 Query: 134 LDNILD-TTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYY 572 LD ++ T+ YD R+RP N P V N+++ SF + + M+Y V I RQQWND RLA+++ L +W PD FF NEK FH++ N +R+ NG +LYSIR++LTLSCPM L+ FP+D QTC +++ S+G+T +DL++ W PVQ L LP G C TG+++C+ V +RQ+ YY+I +YIP+L+IV++SW+SFW++ +APARV+L ITT+L M+T +S SLP V+Y KAID+W +C+ FVF ALLEYA VN+ +R K+ R R+ + +EE+ ++ Y ++ G+AV L + P+D +++ + AKRID ISR FPL+F FNI YW Y Sbjct: 48 LDKLMGRTSGYDARIRP---NFKGPPVNVTCNIFINSFGSVTET-----------TMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQ-----------HKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMGHCLQMKDGTAVKATPANPL-PQPPKD--------------------ADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
BLAST of isoform o vs. SwissProt
Match: gi|121578|sp|P23416.1|GLRA2_HUMAN (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 276.559 bits (706), Expect = 1.226e-85 Identity = 161/440 (36.59%), Postives = 235/440 (53.41%), Query Frame = 0 Query: 134 LDNILD-TTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYY 572 LD ++ T+ YD R+RP N P V N+++ SF + + M+Y V I RQQWND RLA+++ L +W PD FF NEK FH++ N +R+ NG +LYSIR++LTLSCPM L+ FP+D QTC +++ S+G+T +DL++ W PVQ L LP G C TG+++C+ V +RQ+ YY+I +YIP+L+IV++SW+SFW++ +APARV+L ITT+L M+T +S SLP V+Y KAID+W +C+ FVF ALLEYA VN+ +R K+ R R+ + +EE+ ++ Y ++ G+AV L + P+D +++ + AKRID ISR FPL+F FNI YW Y Sbjct: 48 LDKLMGRTSGYDARIRP---NFKGPPVNVTCNIFINSFGSVTET-----------TMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQ-----------HKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPL-PQPPKDG--------------------DAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
BLAST of isoform o vs. SwissProt
Match: gi|116242496|sp|O75311.2|GLRA3_HUMAN (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 275.789 bits (704), Expect = 3.259e-85 Identity = 166/442 (37.56%), Postives = 238/442 (53.85%), Query Frame = 0 Query: 133 ILDNILD-TTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLD-GSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYY 572 LD ++ T+ YD R+RP N P V N+++ SF I + M+Y V I RQ+WND RLA+++ L +W PD FF NEK FH + N +R+F NG++LYSIR++LTLSCPM L+ FP+D QTC +++ S+G+T +DL++ W+ PVQ L LP F L D C TG+++C+ V +RQ+ YY+I +YIP+L+IV++SW+SFW++ +APARV+L ITT+L M+T +S SLP V+Y KAID+W +C+ FVF ALLEYA VN+ +R + L + +R + F E ++Y + D +R S G L A + G V V+ S + + AK+ID ISR FPL+F FNI YW Y Sbjct: 46 FLDKLMGRTSGYDARIRP---NFKGPPVNVTCNIFINSFGSIAET-----------TMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQ-FLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR------QHKELLRFRRKRKNKTEAFALE----KFYR-----FSDMDDEVRESRFSFTAYGMGPCLQA-----KDGMTPKGPNHPVQVMPKSP-DEMRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIY 451
BLAST of isoform o vs. SwissProt
Match: gi|121579|sp|P22771.1|GLRA2_RAT (RecName: Full=Glycine receptor subunit alpha-2; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 273.478 bits (698), Expect = 1.887e-84 Identity = 160/440 (36.36%), Postives = 234/440 (53.18%), Query Frame = 0 Query: 134 LDNILD-TTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYY 572 LD ++ T+ YD R+RP N P V N+++ SF + + M+Y V I RQQWND RLA+++ L +W PD FF NEK FH++ N +R+ NG +LYSIR++LTLSCPM L+ FP+D QTC +++ S+ +T +DL++ W PVQ L LP G C TG+++C+ V +RQ+ YY+I +YIP+L+IV++SW+SFW++ +APARV+L ITT+L M+T +S SLP V+Y KAID+W +C+ FVF ALLEYA VN+ +R K+ R R+ + +EE+ ++ Y ++ G+AV L + P+D +++ + AKRID ISR FPL+F FNI YW Y Sbjct: 48 LDKLMGRTSGYDARIRP---NFKGPPVNVTCNIFINSFGSVTET-----------TMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQ-----------HKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPL-PQPPKD--------------------ADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
BLAST of isoform o vs. SwissProt
Match: gi|6647527|sp|O93430.1|GLRA1_DANRE (RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor) HSP 1 Score: 269.626 bits (688), Expect = 5.355e-83 Identity = 157/443 (35.44%), Postives = 227/443 (51.24%), Query Frame = 0 Query: 132 KILDNIL-DTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGS-CNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYY 572 + LD ++ + YD R+RP N P V N+++ SF I + M+Y V I RQQWND RLA+++ L +W PD FF NEK FH + N +R+ NG++LYSIR++L L+CPM L+ FP+D QTC +++ S+G+T +DL++ W VQ L LP F L D C TG+++C+ +RQ+ YY+I +YIP+L+IV++SW+SFW++ +APARV L ITT+L M+T +S SLP V+Y KAID+W +C+ FVF ALLEYA VN+ AR K++ R ++ + + E+E + Y P + I+G N N + + AKRID +SR+ FPL F FNI YW Y Sbjct: 36 EFLDKLMGKVSGYDARIRP---NFKGPPVNVTCNIFINSFGSIAET-----------TMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQ-FILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARQ-----------HKELLRFQRRRRHLKEDEAGD--GRFSFAAYGMGPACLQAKDGMAIKGNN-----------------NNAPTSTNPPEKTVEEMRKLFISRAKRIDTVSRVAFPLVFLIFNIFYWITY 433
BLAST of isoform o vs. SwissProt
Match: gi|12644526|sp|P57695.1|GLRA1_BOVIN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 267.314 bits (682), Expect = 6.121e-82 Identity = 157/441 (35.60%), Postives = 234/441 (53.06%), Query Frame = 0 Query: 134 LDNILD-TTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLD-GSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYY 572 LD ++ T+ YD R+RP N P V+ N+++ SF I + M+Y V I RQQWND RLA+N+ L +W PD FF NEK FH I N +R+ NG++LYSIR++LTL+CPM L+ FP+D QTC +++ S+G+T +DL++ W+ VQ L LP F L D C TG+++C+ +RQ+ YY+I +YIP+L+IV++SW+SFW++ +APARV L ITT+L M+T +S SLP V+Y KAID+W +C+ FVF ALLEYA VN+ +R + E + ++ + +++E+E + Y P + ++G N P + ++ + AK+ID ISRI FP++F FN+ YW Y Sbjct: 42 LDKLMGRTSGYDARIRP---NFKGPPVNVSCNIFINSFGSIAET-----------TMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQ-FILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV----SRQHKELLRFRRKRRHHKSPMLNLFQEDEAG-EGRFNFSAYGMGPACLQAKDGISVKGANNSNTTNPPPAPSKSPEEMRKLFIQ----------------RAKKIDKISRIGFPMAFLIFNMFYWIIY 446
BLAST of isoform o vs. nr
Match: gi|1325304857|ref|XP_023334025.1| (glutamate-gated chloride channel-like [Eurytemora affinis]) HSP 1 Score: 530.02 bits (1364), Expect = 4.438e-180 Identity = 266/377 (70.56%), Postives = 309/377 (81.96%), Query Frame = 0 Query: 103 HHQSQPQVSPNGPTKSIKEAVKNYRREEKKILDNILDTTVYDNRLRPQGVN----TSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQ 475 H+ + + +PN I+ + NYR+ EK+ILD+IL ++YD ++RP+G N SDGPTVV VNLYVRSFEKIDDVKM E+SVQITFRQQWND+RL F+D +GRIKYLT+ + KVWMPDTFFRNEK GQFHNIIQPNLY+RVFPNGD+LYSIRVSLTLSCPM LELFPLDTQTC L+VASYG+T+ DL+Y WK PDPVQFV+NLFLPGGFEL Y+D SC+VKTATG YSCL+V M FKRQ+SYY++TIY+PT MIV VSWMSFWLDHKSAPARV+LTITTLLAMSTTTSSIN+SLPPVAYTKAIDVWSN+CV+FVFLALLEYALVNYAARADARA R + KQ E+ +EA + Y+ Q Sbjct: 32 QHRGRQERNPN-----IRPRIVNYRQVEKQILDSILSPSIYDAQIRPRGTNLSIAQSDGPTVVLVNLYVRSFEKIDDVKM-----------EFSVQITFRQQWNDNRLEFDDQAGRIKYLTMTERSKVWMPDTFFRNEKDGQFHNIIQPNLYVRVFPNGDVLYSIRVSLTLSCPMDLELFPLDTQTCQLKVASYGWTSQDLIYTWKPPDPVQFVTNLFLPGGFELSRYIDASCDVKTATGHYSCLSVVMQFKRQLSYYVVTIYVPTFMIVCVSWMSFWLDHKSAPARVALTITTLLAMSTTTSSINSSLPPVAYTKAIDVWSNICVSFVFLALLEYALVNYAARADARALELRRSYLKQAEQLEREASYAYQFHPHQ 392
BLAST of isoform o vs. nr
Match: gi|665394500|ref|NP_001287409.1| (GluClalpha, isoform O [Drosophila melanogaster] >gi|599127838|gb|AHN57408.1| GluClalpha, isoform O [Drosophila melanogaster]) HSP 1 Score: 476.093 bits (1224), Expect = 1.188e-160 Identity = 239/449 (53.23%), Postives = 304/449 (67.71%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 N+R +EKK+LD IL YD R+RP G+N +DGP VV VN++VRS KIDDV MEYSVQ+TFR+QW D RL F+D+ GR+KYLTL ++ +VWMPD FF NEK G FHNII PN+YIR+FPNG +LYSIR+SLTL+CPM L+L+PLD Q C LR+ASYG+TT+DLV+LWK DPVQ V NL LP F L +L CN KT TGEYSCL VD+ FKR+ SYY+I IYIP M+V+VSW+SFWLD + PARVSL +TTLL M+T TS IN SLPPV+YTKAIDVW+ +C+TFVF ALLE+ALVNYA+R+D A+ + ++K+ RD ++A + + + PL+R + E +L C + Q + N + ++ R +KRIDVISRI FPL FA FN++YWS YL Sbjct: 28 NFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDV-----------TMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLP-RFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDRAADMHKENMKKK-RRDLEQASL---DAASDLLDTDSNATFAMKPLVRHPGDPLAL--EKRLQC---------EVHMQAPKRPN-CCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYL 448
BLAST of isoform o vs. nr
Match: gi|1036978816|ref|XP_017007271.1| (PREDICTED: glutamate-gated chloride channel isoform X13 [Drosophila takahashii]) HSP 1 Score: 474.552 bits (1220), Expect = 3.892e-160 Identity = 240/450 (53.33%), Postives = 305/450 (67.78%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADA-RANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 N+R +EKK+LD IL YD R+RP G+N +DGP VV VN+Y+RS KIDDV MEYSVQ+TFR+QW D RL F+D+ GR+KYLTL ++ +VWMPD FF NEK G FHNII PN+YIR+FPNG +LYSIR+SLTL+CPM L+L+PLD Q C LR+ASYG+TTDDLV+LWK DPVQ V NL LP F L +L CN KT TGEYSCL VD+ FKR+ SYY+I IYIP M+V+VSW+SFWLD + PARVSL +TTLL M+T TS IN SLPPV+YTKAIDVW+ +C+TFVF ALLE+ALVNYA+R+ + +AN + ++K+ RD ++A + + + PL+R + E +L C + Q + N + ++ R +KRIDVISRI FPL FA FN++YWS YL Sbjct: 28 NFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVFVNIYIRSISKIDDV-----------TMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTDDLVFLWKSGDPVQVVKNLHLP-RFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKK-RRDLEQASL---DAASDLLDTDSNATFAMKPLVRHPGDPLAL--EKRLQC---------EVHMQAPKRPN-CCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYL 449
BLAST of isoform o vs. nr
Match: gi|1036978922|ref|XP_017007278.1| (PREDICTED: glutamate-gated chloride channel isoform X19 [Drosophila takahashii]) HSP 1 Score: 473.781 bits (1218), Expect = 7.910e-160 Identity = 241/449 (53.67%), Postives = 302/449 (67.26%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 N+R +EKK+LD IL YD R+RP G+N +DGP VV VN+Y+RS KIDDV MEYSVQ+TFR+QW D RL F+D+ GR+KYLTL ++ +VWMPD FF NEK G FHNII PN+YIR+FPNG +LYSIR+SLTL+CPM L+L+PLD Q C LR+ASYG+TTDDLV+LWK DPVQ V NL LP F L +L CN KT TGEYSCL VD+ FKR+ SYY+I IYIP M+V+VSW+SFWLD + PARVSL +TTLL M+T TS IN SLPPV+YTKAIDVW+ +C+TFVF ALLE+ALVNYA+R+D + E M K+ RD ++A + + + PL+R + E +L C + Q + N + ++ R +KRIDVISRI FPL FA FN++YWS YL Sbjct: 28 NFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVFVNIYIRSISKIDDV-----------TMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTDDLVFLWKSGDPVQVVKNLHLP-RFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSD--MHKENM---KKKRRDLEQASL---DAASDLLDTDSNATFAMKPLVRHPGDPLAL--EKRLQC---------EVHMQAPKRPN-CCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYL 444
BLAST of isoform o vs. nr
Match: gi|442619962|ref|NP_732447.2| (GluClalpha, isoform I [Drosophila melanogaster] >gi|969476688|ref|XP_015047309.1| uncharacterized protein Dyak_GE25622, isoform L [Drosophila yakuba] >gi|440217634|gb|AAN13808.2| GluClalpha, isoform I [Drosophila melanogaster] >gi|948558372|gb|KRK02881.1| uncharacterized protein Dyak_GE25622, isoform L [Drosophila yakuba]) HSP 1 Score: 473.011 bits (1216), Expect = 1.988e-159 Identity = 239/450 (53.11%), Postives = 305/450 (67.78%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADA-RANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 N+R +EKK+LD IL YD R+RP G+N +DGP VV VN++VRS KIDDV MEYSVQ+TFR+QW D RL F+D+ GR+KYLTL ++ +VWMPD FF NEK G FHNII PN+YIR+FPNG +LYSIR+SLTL+CPM L+L+PLD Q C LR+ASYG+TT+DLV+LWK DPVQ V NL LP F L +L CN KT TGEYSCL VD+ FKR+ SYY+I IYIP M+V+VSW+SFWLD + PARVSL +TTLL M+T TS IN SLPPV+YTKAIDVW+ +C+TFVF ALLE+ALVNYA+R+ + +AN + ++K+ RD ++A + + + PL+R + E +L C + Q + N + ++ R +KRIDVISRI FPL FA FN++YWS YL Sbjct: 28 NFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDV-----------TMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLP-RFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKK-RRDLEQASL---DAASDLLDTDSNATFAMKPLVRHPGDPLAL--EKRLQC---------EVHMQAPKRPN-CCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYL 449
BLAST of isoform o vs. nr
Match: gi|1037098923|ref|XP_017060757.1| (PREDICTED: glutamate-gated chloride channel isoform X1 [Drosophila ficusphila]) HSP 1 Score: 473.011 bits (1216), Expect = 1.995e-159 Identity = 239/450 (53.11%), Postives = 305/450 (67.78%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADA-RANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 N+R +EKK+LD IL YD R+RP G+N +DGP VV VN++VRS KIDDV MEYSVQ+TFR+QW D RL F+D+ GR+KYLTL ++ +VWMPD FF NEK G FHNII PN+YIR+FPNG +LYSIR+SLTL+CPM L+L+PLD Q C LR+ASYG+TT+DLV+LWK DPVQ V NL LP F L +L CN KT TGEYSCL VD+ FKR+ SYY+I IYIP M+V+VSW+SFWLD + PARVSL +TTLL M+T TS IN SLPPV+YTKAIDVW+ +C+TFVF ALLE+ALVNYA+R+ + +AN + ++K+ RD ++A + + + PL+R + E +L C + Q + N + ++ R +KRIDVISRI FPL FA FN++YWS YL Sbjct: 28 NFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDV-----------TMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQVCSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLP-RFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKK-RRDLEQASL---DAASDLLDTDSNATFAMKPLVRHPGDPLAL--EKRLQC---------EVHMQAPKRPN-CCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYL 449
BLAST of isoform o vs. nr
Match: gi|969476691|ref|XP_015047310.1| (uncharacterized protein Dyak_GE25622, isoform M [Drosophila yakuba] >gi|1013925230|ref|XP_016033985.1| uncharacterized protein Dsimw501_GD19310, isoform K [Drosophila simulans] >gi|1189097193|ref|XP_020814238.1| glutamate-gated chloride channel isoform X3 [Drosophila serrata] >gi|900913083|gb|KMZ02585.1| uncharacterized protein Dsimw501_GD19310, isoform K [Drosophila simulans] >gi|948558373|gb|KRK02882.1| uncharacterized protein Dyak_GE25622, isoform M [Drosophila yakuba]) HSP 1 Score: 472.626 bits (1215), Expect = 2.452e-159 Identity = 239/450 (53.11%), Postives = 305/450 (67.78%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADA-RANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 N+R +EKK+LD IL YD R+RP G+N +DGP VV VN++VRS KIDDV MEYSVQ+TFR+QW D RL F+D+ GR+KYLTL ++ +VWMPD FF NEK G FHNII PN+YIR+FPNG +LYSIR+SLTL+CPM L+L+PLD Q C LR+ASYG+TT+DLV+LWK DPVQ V NL LP F L +L CN KT TGEYSCL VD+ FKR+ SYY+I IYIP M+V+VSW+SFWLD + PARVSL +TTLL M+T TS IN SLPPV+YTKAIDVW+ +C+TFVF ALLE+ALVNYA+R+ + +AN + ++K+ RD ++A + + + PL+R + E +L C + Q + N + ++ R +KRIDVISRI FPL FA FN++YWS YL Sbjct: 28 NFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDV-----------TMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLP-RFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKK-RRDLEQASL---DAASDLLDTDSNATFAMKPLVRHPGDPLAL--EKRLQC---------EVHMQAPKRPN-CCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYL 449
BLAST of isoform o vs. nr
Match: gi|1036978780|ref|XP_017007269.1| (PREDICTED: glutamate-gated chloride channel isoform X11 [Drosophila takahashii]) HSP 1 Score: 472.241 bits (1214), Expect = 3.284e-159 Identity = 241/451 (53.44%), Postives = 306/451 (67.85%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVN-TSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADA-RANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 N+R +EKK+LD IL YD R+RP G+N T+DGP VV VN+Y+RS KIDDV MEYSVQ+TFR+QW D RL F+D+ GR+KYLTL ++ +VWMPD FF NEK G FHNII PN+YIR+FPNG +LYSIR+SLTL+CPM L+L+PLD Q C LR+ASYG+TTDDLV+LWK DPVQ V NL LP F L +L CN KT TGEYSCL VD+ FKR+ SYY+I IYIP M+V+VSW+SFWLD + PARVSL +TTLL M+T TS IN SLPPV+YTKAIDVW+ +C+TFVF ALLE+ALVNYA+R+ + +AN + ++K+ RD ++A + + + PL+R + E +L C + Q + N + ++ R +KRIDVISRI FPL FA FN++YWS YL Sbjct: 28 NFREKEKKVLDQILGAGKYDARIRPSGINGTADGPAVVFVNIYIRSISKIDDV-----------TMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTDDLVFLWKSGDPVQVVKNLHLP-RFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKK-RRDLEQASL---DAASDLLDTDSNATFAMKPLVRHPGDPLAL--EKRLQC---------EVHMQAPKRPN-CCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYL 450
BLAST of isoform o vs. nr
Match: gi|1037102221|ref|XP_017084827.1| (PREDICTED: glutamate-gated chloride channel isoform X1 [Drosophila eugracilis]) HSP 1 Score: 472.626 bits (1215), Expect = 3.310e-159 Identity = 237/450 (52.67%), Postives = 304/450 (67.56%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADA-RANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 N+R +EKK+LD IL YD R+RP G+N +DGP VV VN++VRS KIDDV MEYSVQ+TFR+QW D RL F+D+ GR+KYLTL ++ +VWMPD FF NEK G FHNII PN+YIR+FPNG +LYSIR+SLTL+CPM L+L+PLD Q C LR+ASYG+TT+DLV+LWK DPVQ V NL LP F L +L CN KT TGEYSCL VD+ FKR+ SYY+I IYIP M+V+VSW+SFWLD + PARVSL +TTLL M+T TS IN SLPPV+YTKAIDVW+ +C+TFVF ALLE+ALVNYA+R+ + +AN ++ M++ R++ + + + + PL+R + E +L C + Q + N + ++ R +KRIDVISRI FPL FA FN++YWS YL Sbjct: 28 NFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDV-----------TMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLP-RFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANRAADMHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGDPLAL--EKRLQC---------EVHMQAPKRPN-CCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYL 453
BLAST of isoform o vs. nr
Match: gi|1037098967|ref|XP_017060761.1| (PREDICTED: glutamate-gated chloride channel isoform X5 [Drosophila ficusphila]) HSP 1 Score: 472.241 bits (1214), Expect = 3.482e-159 Identity = 240/449 (53.45%), Postives = 302/449 (67.26%), Query Frame = 0 Query: 125 NYRREEKKILDNILDTTVYDNRLRPQGVNTSDGPTVVNVNLYVRSFEKIDDVKMVSAERLLGLVMEYSVQITFRQQWNDHRLAFNDMSGRIKYLTLQDSRKVWMPDTFFRNEKHGQFHNIIQPNLYIRVFPNGDILYSIRVSLTLSCPMTLELFPLDTQTCYLRVASYGFTTDDLVYLWKVPDPVQFVSNLFLPGGFELHSYLDGSCNVKTATGEYSCLTVDMTFKRQISYYIITIYIPTLMIVMVSWMSFWLDHKSAPARVSLTITTLLAMSTTTSSINNSLPPVAYTKAIDVWSNLCVTFVFLALLEYALVNYAARADARANAERMALEKQMERDRQEAQFMYEEEEQQYYNQREKPMYNRDPLMRRIAGSAVIRGENKLLCAELPRDRAGQFKDQNGRAVNVVVNSVMNSLSGRVACEAKRIDVISRIIFPLSFAGFNIMYWSYYL 573 N+R +EKK+LD IL YD R+RP G+N +DGP VV VN++VRS KIDDV MEYSVQ+TFR+QW D RL F+D+ GR+KYLTL ++ +VWMPD FF NEK G FHNII PN+YIR+FPNG +LYSIR+SLTL+CPM L+L+PLD Q C LR+ASYG+TT+DLV+LWK DPVQ V NL LP F L +L CN KT TGEYSCL VD+ FKR+ SYY+I IYIP M+V+VSW+SFWLD + PARVSL +TTLL M+T TS IN SLPPV+YTKAIDVW+ +C+TFVF ALLE+ALVNYA+R+D + E M K+ RD ++A + + + PL+R + E +L C + Q + N + ++ R +KRIDVISRI FPL FA FN++YWS YL Sbjct: 28 NFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDV-----------TMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQVCSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLP-RFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSD--MHKENM---KKKRRDLEQASL---DAASDLLDTDSNATFAMKPLVRHPGDPLAL--EKRLQC---------EVHMQAPKRPN-CCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYL 444 The following BLAST results are available for this feature:
BLAST of isoform o vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of isoform o vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of isoform o vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold903_size83255:9333..30980- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold903_size83255-processed-gene-0.7 ID=snap_masked-scaffold903_size83255-processed-gene-0.7|Name=isoform o|organism=Tigriopus kingsejongensis|type=gene|length=21648bp|location=Sequence derived from alignment at scaffold903_size83255:9333..30980- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'isoform o' has the following synonyms
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