RNAi

Search or browse a total of 415 RNA interference (RNAi) experiments available in LiceBase. RNA interference is a technique to "silence" a gene's expression by injection of double-stranded RNA (dsRNA) or short-interfering RNA (siRNA).
At SLRC, dsRNA has been widely used and can be applied at Nauplia and pre-adult and adult stages of the salmon louse. The animals are then compared to control animals for differences in phenotype. Most are only inspected visually, but some also histologically or measurements, e.g. of egg-string length. Note: "No visible phenotype" means that no difference could be observed under the outlined experimental conditions and using the observation methods applied.

Select one or many phenotypes
List of all RNAi experiments
Gallery Image Titlesort ascending Primary target ID Developmental Stage CV Phenotype Number of Individuals (Start/End) Organism Efficacy of Knock Down Posted
11 Y F203 EMLSAG00000000387, EMLSAG00000000387-683153 (gene) Lepeophtheirus salmonis
387
PreAdult2 7/3 Lepeophtheirus salmonis F>25.00% 10 June, 2015 - 12:36
12 Y F202 EMLSAG00000000496, EMLSAG00000000496-683262 (gene) Lepeophtheirus salmonis
496
PreAdult2, Adult no visible phenotype 30/11 Lepeophtheirus salmonis F>74.00% 10 June, 2015 - 12:32
13 Y F200 EMLSAG00000000562, EMLSAG00000000562-683328 (gene) Lepeophtheirus salmonis
562
PreAdult2, Adult no visible phenotype 30/15 Lepeophtheirus salmonis F>21.00% 10 June, 2015 - 12:29
14 Y F0 placeholder for unknown sequence, geneofdeath (protein_coding_gene) Lepeophtheirus salmonis
CPY185
PreAdult2, Adult Control 30/11 Lepeophtheirus salmonis 27 April, 2015 - 10:07
15 X F210 EMLSAT00000011448, EMLSAT00000011448-707295 (mRNA) Lepeophtheirus salmonis PreAdult2 Eggstrings curly and strange. 30/5 Lepeophtheirus salmonis 14 March, 2017 - 22:02
16 X F209 EMLSAT00000011090, EMLSAT00000011090-706937 (mRNA) Lepeophtheirus salmonis PreAdult2 Short egg-strings. 30/11 Lepeophtheirus salmonis 14 March, 2017 - 21:36
17 X F201 (ZIP13) EMLSAG00000012537, EMLSAG00000012537-695303 (gene) Lepeophtheirus salmonis
ZIP13
PreAdult2, Adult female reproduction, abnormal egg strings 30/7 Lepeophtheirus salmonis 27 July, 2015 - 14:33
18 X F199 EMLSAG00000000147, EMLSAG00000000147-682913 (gene) Lepeophtheirus salmonis PreAdult2, Adult No visible phenotype
no visible phenotype
30/7 Lepeophtheirus salmonis 27 April, 2015 - 10:03
19 X F196 placeholder for unknown sequence, geneofdeath (protein_coding_gene) Lepeophtheirus salmonis
E.coli
PreAdult2 30/11 Lepeophtheirus salmonis 27 April, 2015 - 14:31
20 V F159 EMLSAT00000001069, EMLSAT00000001069-696916 (mRNA) Lepeophtheirus salmonis PreAdult1, PreAdult2 none, normal morphology and digestion 82/10 Lepeophtheirus salmonis 20 January, 2015 - 13:20

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