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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KJ958536 | viral_sequence | KJ958536:5116..11406 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| GenBank | 2017-12-04 .396135 |
Properties
| Property Name | Value |
|---|
| Codon start | 1 |
| Product | RNA-dependent RNA polymerase |
| Translation | length.2096 |
| Protein id | AIY25916.1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA from alignment at KJ958536:5116..11406+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >AIY25916.1.t ID=AIY25916.1.t|Name=LsRhabNo127.L-protein.t|organism=Lepeophtheirus salmonis rhabdovirus No127|type=mRNA|length=6291bp|location=Sequence derived from alignment at KJ958536:5116..11406+ (Lepeophtheirus salmonis rhabdovirus No127)
ATGGATTTTGAGCTAGAAGGTGATAGGTGGAACCATTCATCCCTTTTAGA
AGAAGATGTAGACCACGTGTCCAACAAGCCAAAAGGTTTTGAGAGTCATT
ATTTAAATCAGAAAGACTACACTCTCAACTCGCCTCTTCTCCGAGACGAG
CTAGATGAGCTTCAATCCTTTGTGTTGAATGTTCCTCACAACCCTCTTTT
CTCGAAGAAAGATTGGATTTTGTGGAAGGACGTTCTATCGGGTTTAAACA
AGACTATTGGAAGAAGAACTTGGAGCAGCAGGTTTCCCACTTGGTGGTCG
AAAAGTCTCGATGGACTATGGAACGTCTCAGGCTTTAATAGTTGGCTAAA
TCAAACAAACAAAGACTCTAAGGAAACCTTTATCATTCCAAAAGTATTCC
TCAAGCAGTGGATAAGCAGAGAAGTAGGATACAGGGCGAAGAGGATTACA
CATGATGCAATGCTTAAAATGGGACAGATGTTCTTAGATTTTCATTTTGT
GATACAAGCAATGAACTCTGTATCAAAGTCCGAAAGAGATAGCCTTGGAA
AGTATTGCGGGGTAGGGAAGATGGTAATGAGTGGTCACAATGTGCAGTGT
TTCAATGGAGGAGATGGAAGTACCTGGATCATATCATCAGATCACGCATA
TCAAATTGAATCGAACATGATGCTTGATAGGAACTTAATGTTGATGGTCA
AGGATACAATGATTGCCAGAGTAATGACTTATCTCACCATGGCAGATCGA
TTGGATGGGAGGTATAGTAACAGAGACTTAGACAACCTTGTGGACTTTTA
TAAATTTGGGGATCAATGTTTAAAAGAACATGGAGAAGGAGCCTATAATG
CATTAAAAATGATAGAACCTCTTTGCATAAGGGCTATATCTCTTATCACA
AGGGAGAAAAAACCACTTCTTCAAGTTCCTCGAGTTTTTGAAGATTATAT
GGAACAACAAGCTGTCCTAGTGTTAGAGAGTATACCGACATTCGAACTTC
TGGACCGGCACATATCCAATGAGCAGAAGATAGACTTACTTCTAGTTTAT
TTTGGATCCTTTCGACATTTTGGTCATCCGATACTGGACTATAAGGAGGG
ACTAAGGAAGCTTCATCATCAAGTAACTCTACCAAAAGAAATTGACACTG
ATTATGCCCAAGCATTAGCAAGTGACCTGGCTCGGAAAGTCTTGCACTCA
CAGTTCAAAAAAACGAAGACCTGGTCAGTAACAAGAGAACTAGTAGACCC
TGACCACCCCTTTTTTAGGCATATACACGAAAACTACTGGCCTACATACA
AAGAAGTGGACTCTTTTGGAGATAAATGGCACACATTACCTTTAGCTGCC
TGTTTTGACATCCCCGACTTAATAGATCCTTCCATGATTTACTCAGATAA
GAGTCATTCTCTCAATAGAAAAGATCTGATTTCCCAACTAGAAAGGAATC
CTGGGGAACCTCTACCTACAAAAAGAGTGTTGAAAACATTATTGGAAGAA
CCGGCGACAGATTGGAAGAATTTTTTCCAGAATATAGATGAGAATGGAAT
TGACAAAGATCATCTAATGATAGGATTGAGGGGAAAGGAAAGAGAGATGA
AGCCTGTGGGACGATTTTTTGCTCTTATGACTTGGAGGTTAAGAGAGTAT
TTTGTGTCTACAGAGTATTTAATTAAAAGGCACTTCGTTCCGCTTTTTTC
CGGCCTCACCATGGCTGATGACCTAACAGAACTCATAAGAAAGATGATGA
TCTCCAGTACATCTCAAGGATGTGAAACCTATGAACAAATCGGTATCGCG
AGTCATGTTGATTACGAGAAATGGAACAACCACCAAAGGGAGGAGGCAAC
TTTCTGGGTATTTGAGGTGATGGACAAATTTTTCGGTTTTAAATCTGTAA
TTTCCAGAACTCATGAATTTTTCAAAAAAAGTCTAGTATATTACCTAGGA
AGACCAGATCTTCTTACTCCGAATGGTGACACACTCGAGACTAAAGGAGA
GGATATTATGTGCTGGGAAGGGCAGGATGGGGGATTAGAGGGTCTAAGAC
AGAAAGGTTGGAGTATATTGAATATGTTGGTTATAGAACGAGAAAAGAAG
GTTAGAAACGCCAAGGTAACACTGTTAGCCCAGGGAGACAACCAGGTAAT
AACTGCCCACTACAAGACTGAGACTCCTCCTGATGCATCGGAAGAAGATC
TCATCGGTCCTCTAAGACGTATAACGGAGAATGCAGAGGAGATAATGGAT
GCAATCAGAACAGGAGTGTCGAAGCTGGGGCTTATAATTAAGATGGATGA
AACCCTGCAATCATCGTCACTAACGATCTACGGAAAGATCTTCTTCATAG
ATGGGAGAACAGCTGTCACGGAGACCAAGAAGACTTCGAGAAATACATCC
ACAGTAAACGATCAATTAGCCTCCTATGCTTCCATCATAGGAACTGTCTC
TACAAATGTCTTGACAGTTTCCCACTTTGATACATCACCCGTTGAACCAA
TTCTTCTCCACAATTTCTTTAGCAATATGTGTAGGCTCTTGATTGAGAAA
CATAATCCGGCTTTAAGGAGGTCTATGCTGGGATTAATCGACAACAATCT
AGATTTGGCATTATTGGAGTACAAATGGGCCTCACTTTACCTAGACCCAT
CTTTGGGTGGTATTAGCGGATGTTCTCTGACTAGATTTTTAACCAGGATG
TTTCCTGACCCTTTAACTGAAAGTTTAGCTTTCTGGAAAGGTATCTATGA
AGGGACGGATGATTCCAGACTAAAGAAGTTTTGCGCGAACTGTGGTAATC
CGGAATTAAAGAAATACACGTCCTTAGATTTCCCCAAGCTTTTGGAAGAC
CCTACTTCTTTAAACCTAGCTAGGACTGTGAGTGCTCAGACTATCTTGAA
AAACGAGGTCAAAAGGTACATGTATGATGACTATTCCAATTTTAAAAACG
AAATTGTTAAAGAAGCAACCTTTTATTGTAAAGAAAATGAAGACAATTTA
CTATCGTTTTTAGAATCTATCAAACCCCTGTTCCCAAGATTTCTTAGTGA
ATTCAAATCCGCTACCTTCTTGGGGATTGCAGACTCCATAGTAGGTCTTT
ACCAGAATTCAAGAACCATAAGGAATATGTTTGCCAAGAGGTTACAGATT
GATTTAGACTCTAAAATTATTGAGGGAGAGAGAGAGTCAATAAAGTCGAT
ATGCAACAGATGGGGAGGAAGGACTGAAATTTGGGAATGTTCATCAAATC
ACTCTGACTACTTAAGGGAGTCATCCTGGGCATCTCCACTCGTCGGAACT
ACGGTTCCACACCCTTTTGAGATGACAAGAGCGTGGCATGATGATTCCTC
GCTTTGTGGAAATGATAAAAATCTTATGAGAGATCATGTACAGGTACATA
TCCCTTATGGACTAAAGGATTATCTAAACAAAAGAGGCCCCTTTTCTCCC
TATTTAGGATCAAAAACATCAGAGTCTACAAACATAATAACACCGTGGGA
AAGAGACACAAATATACCTCTTCTTAAGAGAGCGACAAAACTTAGAGAAG
TGATATCATGGTTTGTAGAACCGGAAAGCAATCTAGCCTCAAGTATTTTA
GGGAACCTATATTCTCTTACAGGGGACAGATGGGATCAAGACTTAAAAGG
GTTTCGAAGAACTGGATCGGCCCTCCATAGATTTCATTGCCAGAGAGTTT
CTCCCGGGGGTTATTGTGCAACTAGTCCGAGTAAACTAACCTGGATTAAT
TCTACCACAGACACTCTCTGCTCTATAGGCAGGGAGAATTACGACTTTAT
CTTCCAATCTCTCATTCTGTATTCACAAGTAACCTCCGGGGAGCTCCATG
ATAGGAAAGAGGACTGGGGAATCTATCATTTTCATGTTGGTTGTAAGAAA
TGCCTAAGGAAAATTGAAGAAGTTACACTGGACGCAACTTTTGAGTATAA
GCCCAGGGATTCCAGCCAGGTGGTCAAAAGATGGATACCAGAAGACCATA
TTGAGCCTCCTATAAGGAAAGTAGTGCCTATACCGGTCGGAGACTGGGAT
TCGGTTCCCCATTACTCCAAGTGCAAGGCTATTGGACTAGTACAAGGATT
CATCGTCGGAGACTCATTTCTCAGAGATTCCTCCCTCTACAAGGATGCAG
ACCTATTTCCCTTGTCTATAAGAACAAGACTTGACGGACGCAATTATTTT
GATGGGATACTGGAGGGGCTAACAAGAGCGGCTGCTCTAGACTTGCTTTA
CAAAAGATCTCAGGGGAAGGTAGATTCGATTCGAGATTCGGTGACTGCTA
CAATTCATTACCTTTCCTTAGCTCTAACTGAGAATTCCTCATTCAGGAAT
TGCTGCAGATCTCCGAACCTCCAGGCCATATTGGTTTCTAGTTCCCATCG
GATACCGTCTTCTTACCCAATCAGGAGCGATGATTTATCGCTTCTCTTAA
GAACTTACTTGGTACTGAGGCATCGAAACTTAGGAATGGAGGCCTACAAA
ACGTCAGTAATCTGGATATTTGCTGACATAATGGTACGGGAGATAATGGG
GCCCATGGCCTTATCCTCCACCGCATTGAAATACATGGGAAAGAGACATT
GGAATAAAACAGATGTCAGAATAATTAAAGCTCTGCGGGACTATGTATCA
TCCCTTCGATCAAAAGAAAGTGCTGAGGTCCCACTAAGTAAGTACACAAA
AAATGTTTTTAGAACCTTCAACCAGATCAGAGCTGCAATGAAGGATTGTC
CAGAAGCTGACGACGAGGCCCACATCTTAGAATGGGGAGAACCCGTCGTC
GGAAGACTCATTGGGCTGAGTTTAAAGACAATGACTTCTAAGGAAGACAA
GTTCAATAGAGAAGTCTTTGTCCCGAGATATCAAAATCCAATGATCAGTG
GTCTGAGATTGTTTCAATGTTCTACTGGAACACACTACAAAATTATCTCT
ATCCTCAGGAACTTCCAAATATCGTGGATCGATGCAATATCGGCTGGGGA
TGGTTCTGGGGGGATTACAGCCCTTTTGTTAAGAGAAAACCTAACATCTA
GAGTGATCTTCAATTCCCTGTTAAAATTAAGTGGGGTAGAACTTCGCGGG
GCATCACCCGCCCCTCCATCTGCCGTAGAAGCACTAGGAGAAAGCAAGAG
GAGATGCGTCAACTTAAATACTGCGTGGCAAAATCAGTCTGATCTAAGAC
TGGAAAGAACTTGGGATAGCTGGAGAGACATGATTACCAGTTCAAATCTG
AAAGTCAACTTACTAATCATTGATGCGGAAGCCCAAACTACTAAAAATCA
TGAGACCATTTTGAATGTACTTCTAAAGAAGGTGAACGGTGTGCTCATGC
CGGGGGGAACGTTGCTGTTCAAGACATACCTGCATTACCTGCTACAAGAA
AGAACCATGAAATTTGGGGAACTGATTTCTAATTTTAAAGAAGTGCATGC
AGTCCAGACTATCTTCTCAGCCTCAAGATCATCGGAAGTTTACCTTGTTT
GTAGATACAGAAGGAGGGTGAGGAAAGAGATTTATCCTTTGGACAGGATG
AGTATATACAGACATAAATCTATATTCTTGTGTTATAACTCTCTCGAATC
AGAGATCAAAAGGGCAAGGGTGGTAATGAATCTTCCCATGTTTCAGGGAA
TCCCTAGAGAATTAGTACCAGATCTAGTCATAGAACTACAAATCTTATTG
GGGATGGCAGGATTCGGGCAGGAAAAAGTAGTACAATTGGCAGACCATAT
AACGACCAAGAAAATAACTATGGAATCTCTAACCGACTGGTTCCTTATGT
CCGGGACAGCCCACCATTTCAGAGCAGGCAGATCAAAGAATAAACCCCGT
CCACCGACTCTAGGAGATTGCAAGAAAGGAGCAGTGATTATGATAGGGTC
TCTAATCTCTAAAGGGTTGATAACCGCGGAGACCTGGCAGATAGAAAAGG
CTCAAAACATTATACAATCGGGTTTTTACTTCTGGTGGAGATCGTGGGAA
AGCAGGAAAACTAGTCAGTACAAAACTGATTGGAGATTAAGTAGGGGAGG
ACTTTTCAGGTTGGTCTATTTAAAGGATAAGATGGCGGGTATATCAGGGG
TAATAAGAACACTGGACAGAATACGAAGACACTACAGGGATGACAAGAAA
TTAAAACAAGGGGCACTTACAAGTCCCTCAATTTCTGGGGGGGTCCTGGA
ACTACTCCGCAAAAATTTTGTTCAACCACCACCCGATGACATTGTGTCTA
TACTGCCGGCTGACCCGTTTGTAGAAGGAATACGGGAATGA back to top
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