EMLSAG00000000022, EMLSAG00000000022-682788 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000022
Unique NameEMLSAG00000000022-682788
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000000022 vs. GO
Match: - (symbol:Rims1 "Regulating synaptic membrane exocytosis protein 1" species:10116 "Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006836 "neurotransmitter transport" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0031632 "positive regulation of synaptic vesicle fusion to presynaptic membrane" evidence=NAS] [GO:0042734 "presynaptic membrane" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00595 InterPro:IPR000008 InterPro:IPR001478 InterPro:IPR010911 Pfam:PF00168 Pfam:PF02318 PROSITE:PS50004 PROSITE:PS50106 PROSITE:PS50916 SMART:SM00228 SMART:SM00239 RGD:620000 GO:GO:0006886 GO:GO:0046872 GO:GO:0030054 GO:GO:0060291 GO:GO:0042734 SUPFAM:SSF49562 GO:GO:0006887 Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 SUPFAM:SSF50156 GO:GO:0006836 PDB:1ZUB PDBsum:1ZUB CTD:22999 eggNOG:NOG286957 HOVERGEN:HBG058147 KO:K15291 EMBL:AF007836 EMBL:AF199333 PIR:T03301 RefSeq:NP_439894.1 UniGene:Rn.10799 PDB:2Q3X PDBsum:2Q3X ProteinModelPortal:Q9JIR4 SMR:Q9JIR4 DIP:DIP-41432N IntAct:Q9JIR4 MINT:MINT-4998291 STRING:10116.ENSRNOP00000014976 PhosphoSite:Q9JIR4 PaxDb:Q9JIR4 PRIDE:Q9JIR4 GeneID:84556 KEGG:rno:84556 UCSC:RGD:620000 EvolutionaryTrace:Q9JIR4 NextBio:617105 Genevestigator:Q9JIR4 GO:GO:0031632 Uniprot:Q9JIR4)

HSP 1 Score: 60.077 bits (144), Expect = 2.643e-9
Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK 195
            RNDSLSSDQSE VRP PPKPH+ K        ++  + +SSSEEE  STP+  TSCE  E ESES+SEK
Sbjct:  511 RNDSLSSDQSESVRPSPPKPHRPKR-----GGKRRQMSVSSSEEEGVSTPE-YTSCEDVELESESVSEK 573
[Close]
BLAST of EMLSAG00000000022 vs. GO
Match: - (symbol:Rims1 "regulating synaptic membrane exocytosis 1" species:10116 "Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005623 "cell" evidence=ISO] [GO:0006461 "protein complex assembly" evidence=IEA;ISO] [GO:0006836 "neurotransmitter transport" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IPI] [GO:0017137 "Rab GTPase binding" evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0031632 "positive regulation of synaptic vesicle fusion to presynaptic membrane" evidence=NAS] [GO:0042391 "regulation of membrane potential" evidence=IEA;ISO] [GO:0042734 "presynaptic membrane" evidence=IDA] [GO:0044325 "ion channel binding" evidence=IEA;ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0045202 "synapse" evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA;ISO] [GO:0048791 "calcium ion-dependent exocytosis of neurotransmitter" evidence=IEA;ISO] [GO:0060291 "long-term synaptic potentiation" evidence=IMP] Pfam:PF00595 InterPro:IPR000008 InterPro:IPR001478 InterPro:IPR010911 Pfam:PF00168 Pfam:PF02318 PROSITE:PS50004 PROSITE:PS50106 PROSITE:PS50916 SMART:SM00228 SMART:SM00239 RGD:620000 GO:GO:0006886 GO:GO:0046872 GO:GO:0030054 GO:GO:0060291 GO:GO:0042734 SUPFAM:SSF49562 GO:GO:0006887 Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 SUPFAM:SSF50156 GO:GO:0006836 PDB:1ZUB PDBsum:1ZUB CTD:22999 eggNOG:NOG286957 HOVERGEN:HBG058147 KO:K15291 EMBL:AF007836 EMBL:AF199333 PIR:T03301 RefSeq:NP_439894.1 UniGene:Rn.10799 PDB:2Q3X PDBsum:2Q3X ProteinModelPortal:Q9JIR4 SMR:Q9JIR4 DIP:DIP-41432N IntAct:Q9JIR4 MINT:MINT-4998291 STRING:10116.ENSRNOP00000014976 PhosphoSite:Q9JIR4 PaxDb:Q9JIR4 PRIDE:Q9JIR4 GeneID:84556 KEGG:rno:84556 UCSC:RGD:620000 EvolutionaryTrace:Q9JIR4 NextBio:617105 Genevestigator:Q9JIR4 GO:GO:0031632 Uniprot:Q9JIR4)

HSP 1 Score: 60.077 bits (144), Expect = 2.643e-9
Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK 195
            RNDSLSSDQSE VRP PPKPH+ K        ++  + +SSSEEE  STP+  TSCE  E ESES+SEK
Sbjct:  511 RNDSLSSDQSESVRPSPPKPHRPKR-----GGKRRQMSVSSSEEEGVSTPE-YTSCEDVELESESVSEK 573
[Close]
BLAST of EMLSAG00000000022 vs. GO
Match: - (symbol:Rims1 "Regulating synaptic membrane exocytosis protein 1" species:10116 "Rattus norvegicus" [GO:0006461 "protein complex assembly" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=IEA] [GO:0042391 "regulation of membrane potential" evidence=IEA] [GO:0044325 "ion channel binding" evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA] [GO:0048791 "calcium ion-dependent exocytosis of neurotransmitter" evidence=IEA] Pfam:PF00595 InterPro:IPR000008 InterPro:IPR001478 InterPro:IPR010911 Pfam:PF00168 PROSITE:PS50004 PROSITE:PS50106 PROSITE:PS50916 SMART:SM00228 SMART:SM00239 RGD:620000 GO:GO:0006886 GO:GO:0006461 GO:GO:0046872 GO:GO:0045202 GO:GO:0042391 SUPFAM:SSF49562 Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 SUPFAM:SSF50156 GO:GO:0048169 GO:GO:0048791 OMA:ERKKTPG OrthoDB:EOG7BGHJV GeneTree:ENSGT00550000074588 EMBL:AABR06059249 EMBL:AABR06059250 EMBL:AABR06059251 EMBL:AABR06059252 EMBL:AABR06059253 EMBL:AABR06059254 EMBL:AABR06059255 EMBL:AABR06059256 EMBL:AABR06059257 EMBL:AABR06059258 EMBL:AABR06059259 EMBL:AABR06059260 EMBL:AABR06059261 EMBL:AABR06059262 EMBL:AABR06059263 EMBL:AABR06059264 EMBL:AABR06059265 EMBL:AABR06059266 EMBL:AABR06059267 EMBL:AABR06059268 EMBL:AABR06059269 EMBL:AABR06059270 EMBL:AABR06059271 EMBL:AABR06059272 EMBL:AABR06059273 EMBL:AABR06059274 EMBL:AABR06059275 EMBL:AABR06059276 Ensembl:ENSRNOT00000015453 NextBio:35579243 Uniprot:F1LYS1)

HSP 1 Score: 60.077 bits (144), Expect = 2.724e-9
Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK 195
            RNDSLSSDQSE VRP PPKPH+ K        ++  + +SSSEEE  STP+  TSCE  E ESES+SEK
Sbjct:  511 RNDSLSSDQSESVRPSPPKPHRPKR-----GGKRRQMSVSSSEEEGVSTPE-YTSCEDVELESESVSEK 573
[Close]
BLAST of EMLSAG00000000022 vs. GO
Match: - (symbol:RIMS2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00595 InterPro:IPR000008 InterPro:IPR001478 InterPro:IPR010911 Pfam:PF00168 Pfam:PF02318 PROSITE:PS50004 PROSITE:PS50106 PROSITE:PS50916 SMART:SM00228 SMART:SM00239 GO:GO:0006886 GO:GO:0046872 SUPFAM:SSF49562 Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 SUPFAM:SSF50156 OrthoDB:EOG7BGHJV GeneTree:ENSGT00550000074588 OMA:NGSGMKH EMBL:AAEX03008716 EMBL:AAEX03008708 EMBL:AAEX03008709 EMBL:AAEX03008710 EMBL:AAEX03008711 EMBL:AAEX03008712 EMBL:AAEX03008713 EMBL:AAEX03008714 EMBL:AAEX03008715 Ensembl:ENSCAFT00000047827 Uniprot:J9NYS3)

HSP 1 Score: 47.3654 bits (111), Expect = 3.720e-5
Identity = 45/75 (60.00%), Postives = 51/75 (68.00%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEKDSQNMN 201
            RNDSLSSDQSE VRPPPPKPHK K        +   + LSSSEEEL STP+  TSC+  E ESES+SEK   + N
Sbjct:  479 RNDSLSSDQSESVRPPPPKPHKSKK-----GGKMRQVSLSSSEEELASTPEY-TSCDDVEIESESVSEKGDMDYN 547
[Close]
BLAST of EMLSAG00000000022 vs. GO
Match: - (symbol:RIMS2 "Regulating synaptic membrane exocytosis protein 2" species:9606 "Homo sapiens" [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=IEA] [GO:0017156 "calcium ion-dependent exocytosis" evidence=IEA] [GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0019933 "cAMP-mediated signaling" evidence=IEA] [GO:0030073 "insulin secretion" evidence=IEA] [GO:0042391 "regulation of membrane potential" evidence=IEA] [GO:0044325 "ion channel binding" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0048791 "calcium ion-dependent exocytosis of neurotransmitter" evidence=IEA] Pfam:PF00595 InterPro:IPR000008 InterPro:IPR001478 InterPro:IPR010911 Pfam:PF00168 Pfam:PF02318 PROSITE:PS50004 PROSITE:PS50106 PROSITE:PS50916 SMART:SM00228 SMART:SM00239 GO:GO:0006886 GO:GO:0046872 GO:GO:0019933 GO:GO:0042391 SUPFAM:SSF49562 Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0017156 SUPFAM:SSF50156 GO:GO:0030073 GO:GO:0048791 GO:GO:0017157 EMBL:AC012213 OrthoDB:EOG7BGHJV EMBL:AC007751 EMBL:AC090448 EMBL:AC090686 EMBL:AC107933 EMBL:AP001572 EMBL:AP002849 HGNC:HGNC:17283 ProteinModelPortal:E9PFB6 SMR:E9PFB6 Ensembl:ENST00000504942 NextBio:35501821 ArrayExpress:E9PFB6 Bgee:E9PFB6 Uniprot:E9PFB6)

HSP 1 Score: 47.3654 bits (111), Expect = 3.806e-5
Identity = 46/75 (61.33%), Postives = 51/75 (68.00%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEKDSQNMN 201
            RNDSLSSDQSE VRPPPPKPHK K        +   I LSSSEEEL STP+  TSC+  E ESES+SEK   + N
Sbjct:  479 RNDSLSSDQSESVRPPPPKPHKSKK-----GGKMRQISLSSSEEELASTPEY-TSCDDVEIESESVSEKGDMDYN 547
[Close]
BLAST of EMLSAG00000000022 vs. GO
Match: - (symbol:RIMS2 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0017156 "calcium ion-dependent exocytosis" evidence=IEA] [GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0019933 "cAMP-mediated signaling" evidence=IEA] [GO:0030073 "insulin secretion" evidence=IEA] [GO:0042391 "regulation of membrane potential" evidence=IEA] [GO:0044325 "ion channel binding" evidence=IEA] [GO:0048791 "calcium ion-dependent exocytosis of neurotransmitter" evidence=IEA] Pfam:PF00595 InterPro:IPR000008 InterPro:IPR001478 Pfam:PF00168 PROSITE:PS50004 PROSITE:PS50106 SMART:SM00228 SMART:SM00239 GO:GO:0019933 GO:GO:0042391 SUPFAM:SSF49562 GO:GO:0017156 SUPFAM:SSF50156 GO:GO:0030073 GO:GO:0048791 GO:GO:0017157 OrthoDB:EOG7BGHJV TreeFam:TF321703 GeneTree:ENSGT00550000074588 EMBL:DAAA02039301 EMBL:DAAA02039302 EMBL:DAAA02039303 EMBL:DAAA02039304 EMBL:DAAA02039305 EMBL:DAAA02039306 EMBL:DAAA02039307 EMBL:DAAA02039308 EMBL:DAAA02039309 Ensembl:ENSBTAT00000060962 OMA:NGSGMKH Uniprot:E1B7V2)

HSP 1 Score: 47.3654 bits (111), Expect = 4.261e-5
Identity = 47/74 (63.51%), Postives = 52/74 (70.27%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK-DSQN 199
            RNDSLSSDQSE VRPPPPKPHK K        +   + LSSSEEEL STP+  TSC+  E ESES+SEK DSQ 
Sbjct:  247 RNDSLSSDQSESVRPPPPKPHKSKK-----GGKMRQVSLSSSEEELASTPEY-TSCDDVEIESESVSEKGDSQK 314
[Close]
BLAST of EMLSAG00000000022 vs. GO
Match: - (symbol:RIMS2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=IEA] [GO:0017156 "calcium ion-dependent exocytosis" evidence=IEA] [GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0019933 "cAMP-mediated signaling" evidence=IEA] [GO:0030073 "insulin secretion" evidence=IEA] [GO:0042391 "regulation of membrane potential" evidence=IEA] [GO:0044325 "ion channel binding" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0048791 "calcium ion-dependent exocytosis of neurotransmitter" evidence=IEA] Pfam:PF00595 InterPro:IPR000008 InterPro:IPR001478 InterPro:IPR010911 Pfam:PF00168 Pfam:PF02318 PROSITE:PS50004 PROSITE:PS50106 SMART:SM00228 SMART:SM00239 GO:GO:0006886 GO:GO:0046872 GO:GO:0019933 GO:GO:0042391 SUPFAM:SSF49562 Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0017156 SUPFAM:SSF50156 GO:GO:0030073 GO:GO:0048791 GO:GO:0017157 TreeFam:TF321703 GeneTree:ENSGT00550000074588 EMBL:AAEX03008716 EMBL:AAEX03008708 EMBL:AAEX03008709 EMBL:AAEX03008710 EMBL:AAEX03008711 EMBL:AAEX03008712 EMBL:AAEX03008713 EMBL:AAEX03008714 EMBL:AAEX03008715 Ensembl:ENSCAFT00000001036 Uniprot:F1P9T3)

HSP 1 Score: 46.9802 bits (110), Expect = 5.089e-5
Identity = 47/74 (63.51%), Postives = 52/74 (70.27%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK-DSQN 199
            RNDSLSSDQSE VRPPPPKPHK K        +   + LSSSEEEL STP+  TSC+  E ESES+SEK DSQ 
Sbjct:  463 RNDSLSSDQSESVRPPPPKPHKSKK-----GGKMRQVSLSSSEEELASTPEY-TSCDDVEIESESVSEKGDSQK 530
[Close]
BLAST of EMLSAG00000000022 vs. GO
Match: - (symbol:RIMS2 "Regulating synaptic membrane exocytosis protein 2" species:9606 "Homo sapiens" [GO:0005515 "protein binding" evidence=IPI] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=IEA] [GO:0017156 "calcium ion-dependent exocytosis" evidence=IEA] [GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0019933 "cAMP-mediated signaling" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030073 "insulin secretion" evidence=IEA] [GO:0042391 "regulation of membrane potential" evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0044325 "ion channel binding" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0048791 "calcium ion-dependent exocytosis of neurotransmitter" evidence=IEA] Pfam:PF00595 InterPro:IPR000008 InterPro:IPR001478 InterPro:IPR010911 Pfam:PF00168 Pfam:PF02318 PROSITE:PS50004 PROSITE:PS50106 PROSITE:PS50916 SMART:SM00228 SMART:SM00239 GO:GO:0006886 GO:GO:0046872 GO:GO:0019933 GO:GO:0030054 GO:GO:0042734 GO:GO:0042391 SUPFAM:SSF49562 Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0017156 SUPFAM:SSF50156 GO:GO:0030073 GO:GO:0048791 GO:GO:0017157 EMBL:AC012213 eggNOG:NOG286957 HOGENOM:HOG000082403 HOVERGEN:HBG058147 TreeFam:TF321703 EMBL:AB018294 EMBL:AF007156 EMBL:AK126939 EMBL:AC007751 EMBL:AC090448 EMBL:AC090686 EMBL:AC107933 EMBL:AP001572 EMBL:AP002849 EMBL:BC043144 EMBL:AY057119 EMBL:AY057121 RefSeq:NP_001093587.1 RefSeq:NP_001269810.1 RefSeq:NP_001269811.1 RefSeq:NP_055492.3 UniGene:Hs.655271 UniGene:Hs.735969 PDB:1V27 PDB:1WFG PDBsum:1V27 PDBsum:1WFG ProteinModelPortal:Q9UQ26 SMR:Q9UQ26 BioGrid:115051 IntAct:Q9UQ26 MINT:MINT-3083593 STRING:9606.ENSP00000386228 PhosphoSite:Q9UQ26 DMDM:41019522 PaxDb:Q9UQ26 PRIDE:Q9UQ26 Ensembl:ENST00000262231 Ensembl:ENST00000339750 Ensembl:ENST00000406091 Ensembl:ENST00000507740 GeneID:9699 KEGG:hsa:9699 UCSC:uc003ylq.3 UCSC:uc003ylr.3 CTD:9699 GeneCards:GC08P104582 H-InvDB:HIX0020449 HGNC:HGNC:17283 HPA:HPA046538 HPA:HPA053672 MIM:606630 neXtProt:NX_Q9UQ26 PharmGKB:PA38445 InParanoid:Q9UQ26 KO:K15297 EvolutionaryTrace:Q9UQ26 GeneWiki:RIMS2 GenomeRNAi:9699 NextBio:36445 PRO:PR:Q9UQ26 ArrayExpress:Q9UQ26 Bgee:Q9UQ26 CleanEx:HS_RIMS2 Genevestigator:Q9UQ26 Uniprot:Q9UQ26)

HSP 1 Score: 46.9802 bits (110), Expect = 5.519e-5
Identity = 48/74 (64.86%), Postives = 52/74 (70.27%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK-DSQN 199
            RNDSLSSDQSE VRPPPPKPHK K        +   I LSSSEEEL STP+  TSC+  E ESES+SEK DSQ 
Sbjct:  510 RNDSLSSDQSESVRPPPPKPHKSKK-----GGKMRQISLSSSEEELASTPEY-TSCDDVEIESESVSEKGDSQK 577
[Close]
BLAST of EMLSAG00000000022 vs. GO
Match: - (symbol:rims2a "regulating synaptic membrane exocytosis 2a" species:7955 "Danio rerio" [GO:0017137 "Rab GTPase binding" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00595 InterPro:IPR000008 InterPro:IPR001478 InterPro:IPR010911 Pfam:PF00168 Pfam:PF02318 PROSITE:PS50004 PROSITE:PS50106 PROSITE:PS50916 SMART:SM00228 SMART:SM00239 ZFIN:ZDB-GENE-040426-1656 GO:GO:0006886 GO:GO:0046872 SUPFAM:SSF49562 Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 SUPFAM:SSF50156 OrthoDB:EOG7BGHJV GeneTree:ENSGT00550000074588 OMA:NGSGMKH EMBL:CU695177 EMBL:CABZ01050945 EMBL:CABZ01050946 EMBL:CABZ01050947 EMBL:CABZ01050948 EMBL:CABZ01050949 EMBL:CABZ01050950 EMBL:CABZ01052252 EMBL:CABZ01052253 EMBL:CABZ01052254 EMBL:CABZ01052255 EMBL:CABZ01052256 EMBL:CABZ01066283 EMBL:CABZ01066284 EMBL:CABZ01066285 EMBL:CABZ01066286 EMBL:CABZ01066287 EMBL:CABZ01066288 EMBL:CABZ01066289 EMBL:CABZ01066290 EMBL:CABZ01066291 EMBL:CABZ01073503 EMBL:CABZ01073504 EMBL:CABZ01073505 EMBL:CR925804 Ensembl:ENSDART00000079296 ArrayExpress:E7FFP0 Bgee:E7FFP0 Uniprot:E7FFP0)

HSP 1 Score: 46.595 bits (109), Expect = 6.439e-5
Identity = 40/71 (56.34%), Postives = 45/71 (63.38%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVR--PPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK 195
            RNDSLSSDQSE VR  PP P   KR   +         + LSSSEEEL +TP+  TSCE  E ESES+SEK
Sbjct:  423 RNDSLSSDQSESVRPPPPKPHKTKRGGKMRQ-------VSLSSSEEELATTPEY-TSCEDVEIESESVSEK 485
[Close]
BLAST of EMLSAG00000000022 vs. GO
Match: - (symbol:Gga.26744 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=IEA] [GO:0017156 "calcium ion-dependent exocytosis" evidence=IEA] [GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0019933 "cAMP-mediated signaling" evidence=IEA] [GO:0030073 "insulin secretion" evidence=IEA] [GO:0042391 "regulation of membrane potential" evidence=IEA] [GO:0044325 "ion channel binding" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0048791 "calcium ion-dependent exocytosis of neurotransmitter" evidence=IEA] Pfam:PF00595 InterPro:IPR000008 InterPro:IPR001478 InterPro:IPR010911 Pfam:PF00168 Pfam:PF02318 PROSITE:PS50004 PROSITE:PS50106 SMART:SM00228 SMART:SM00239 GO:GO:0006886 GO:GO:0046872 SUPFAM:SSF49562 Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 SUPFAM:SSF50156 OrthoDB:EOG7BGHJV TreeFam:TF321703 GeneTree:ENSGT00550000074588 EMBL:AADN03002907 EMBL:AADN03002307 Ensembl:ENSGALT00000025900 Uniprot:F1P092)

HSP 1 Score: 46.2098 bits (108), Expect = 9.314e-5
Identity = 47/75 (62.67%), Postives = 52/75 (69.33%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK---DSQ 198
            RNDSLSSDQSE VRPPPPKPHK K        +   + LSSSEEEL STP+  TSC+  E ESES+SEK   DSQ
Sbjct:  420 RNDSLSSDQSESVRPPPPKPHKTKK-----GGKMRQVSLSSSEEELASTPEY-TSCDDVEIESESVSEKAIGDSQ 488
[Close]
BLAST of EMLSAG00000000022 vs. C. finmarchicus
Match: gi|592749621|gb|GAXK01204792.1| (TSA: Calanus finmarchicus comp540019_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.5798 bits (83), Expect = 4.738e-2
Identity = 35/74 (47.30%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:   74 NIPRHHSRD----LYPRVLVSEGESRDQCTPLFDPETG-QPSL---XXXXXXXXXXMMGLHYRRNDSLSSDQSE 139
            + P  H RD    LYPRVLVS+ E+RDQ   + + E   Q SL   N     + RR M   + RNDSLSSDQSE
Sbjct: 5231 SAPEDHGRDGPYNLYPRVLVSDQEARDQFPVMSETEMKIQKSLLDPNDARGVSNRRKMDSSF-RNDSLSSDQSE 5449
[Close]
BLAST of EMLSAG00000000022 vs. L. salmonis peptides
Match: EMLSAP00000000022 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1004:92038:93364:-1 gene:EMLSAG00000000022 transcript:EMLSAT00000000022 description:"snap-LSalAtl2s1004-processed-gene-0.16")

HSP 1 Score: 407.142 bits (1045), Expect = 1.018e-145
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 
Query:    1 MPDPSIDNIISSNPPPHHFPYTPRQAPPFTHQRPFYPRFPRGQQLSRQRSLEGGFPSSASSSASSTAGGAPEDNIPRHHSRDLYPRVLVSEGESRDQCTPLFDPETGQPSLNGGGNQNRRRMMGLHYRRNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCEEFESESISEKDSQNMN 201
            MPDPSIDNIISSNPPPHHFPYTPRQAPPFTHQRPFYPRFPRGQQLSRQRSLEGGFPSSASSSASSTAGGAPEDNIPRHHSRDLYPRVLVSEGESRDQCTPLFDPETGQPSLNGGGNQNRRRMMGLHYRRNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCEEFESESISEKDSQNMN
Sbjct:    1 MPDPSIDNIISSNPPPHHFPYTPRQAPPFTHQRPFYPRFPRGQQLSRQRSLEGGFPSSASSSASSTAGGAPEDNIPRHHSRDLYPRVLVSEGESRDQCTPLFDPETGQPSLNGGGNQNRRRMMGLHYRRNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCEEFESESISEKDSQNMN 201
[Close]
BLAST of EMLSAG00000000022 vs. SwissProt
Match: gi|34395823|sp|Q9EQZ7.1|RIMS2_MOUSE (RecName: Full=Regulating synaptic membrane exocytosis protein 2; AltName: Full=Rab-3-interacting molecule 2; Short=RIM 2; AltName: Full=Rab-3-interacting protein 2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.083e-12
Identity = 46/74 (62.16%), Postives = 52/74 (70.27%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK-DSQN 199
            RNDSLSSDQSE VRPPPP+PHK K        +   + LSSSEEEL STP+  TSC+  E ESES+SEK DSQ 
Sbjct:  519 RNDSLSSDQSESVRPPPPRPHKSKK-----GGKMRQVSLSSSEEELASTPEY-TSCDDVELESESVSEKGDSQK 586
[Close]
BLAST of EMLSAG00000000022 vs. SwissProt
Match: gi|34395746|sp|Q9JIS1.1|RIMS2_RAT (RecName: Full=Regulating synaptic membrane exocytosis protein 2; AltName: Full=Rab-3-interacting molecule 2; Short=RIM 2)

HSP 1 Score: 65.855 bits (159), Expect = 1.532e-11
Identity = 42/69 (60.87%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK 195
            RNDSLSSDQSE VRPPPP+PHK K        +   + LSSSEEEL STP+  TSC+  E ESES+ EK
Sbjct:  479 RNDSLSSDQSESVRPPPPRPHKSKK-----GGKMRQVSLSSSEEELASTPEY-TSCDDVEIESESVGEK 541
[Close]
BLAST of EMLSAG00000000022 vs. SwissProt
Match: gi|34395763|sp|Q86UR5.1|RIMS1_HUMAN (RecName: Full=Regulating synaptic membrane exocytosis protein 1; AltName: Full=Rab-3-interacting molecule 1; Short=RIM 1; AltName: Full=Rab-3-interacting protein 2)

HSP 1 Score: 62.003 bits (149), Expect = 3.080e-10
Identity = 42/69 (60.87%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK 195
            RNDSLSSDQSE VRP PPKPH+ K        +K  + +SSSEEE  STP+  TSCE  E ESES+SEK
Sbjct:  497 RNDSLSSDQSESVRPSPPKPHRSKR-----GGKKRQMSVSSSEEEGVSTPEY-TSCEDVELESESVSEK 559
[Close]
BLAST of EMLSAG00000000022 vs. SwissProt
Match: gi|34395745|sp|Q9JIR4.1|RIMS1_RAT (RecName: Full=Regulating synaptic membrane exocytosis protein 1; AltName: Full=Rab-3-interacting molecule 1; Short=RIM 1)

HSP 1 Score: 60.077 bits (144), Expect = 1.650e-9
Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:  129 RNDSLSSDQSECVRPPPPKPHKRKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCE--EFESESISEK 195
            RNDSLSSDQSE VRP PPKPH+ K        ++  + +SSSEEE  STP+  TSCE  E ESES+SEK
Sbjct:  511 RNDSLSSDQSESVRPSPPKPHRPKR-----GGKRRQMSVSSSEEEGVSTPE-YTSCEDVELESESVSEK 573
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000022 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 20
Match NameE-valueIdentityDescription
-2.643e-959.42symbol:Rims1 "Regulating synaptic membrane exocyto... [more]
-2.643e-959.42symbol:Rims1 "regulating synaptic membrane exocyto... [more]
-2.724e-959.42symbol:Rims1 "Regulating synaptic membrane exocyto... [more]
-3.720e-560.00symbol:RIMS2 "Uncharacterized protein" species:961... [more]
-3.806e-561.33symbol:RIMS2 "Regulating synaptic membrane exocyto... [more]
-4.261e-563.51symbol:RIMS2 "Uncharacterized protein" species:991... [more]
-5.089e-563.51symbol:RIMS2 "Uncharacterized protein" species:961... [more]
-5.519e-564.86symbol:RIMS2 "Regulating synaptic membrane exocyto... [more]
-6.439e-556.34symbol:rims2a "regulating synaptic membrane exocyt... [more]
-9.314e-562.67symbol:Gga.26744 "Uncharacterized protein" species... [more]

Pages

back to top
BLAST of EMLSAG00000000022 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 1
Match NameE-valueIdentityDescription
gi|592749621|gb|GAXK01204792.1|4.738e-247.30TSA: Calanus finmarchicus comp540019_c0_seq1 trans... [more]
back to top
BLAST of EMLSAG00000000022 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000000221.018e-145100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1004:9203... [more]
back to top
BLAST of EMLSAG00000000022 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
gi|34395823|sp|Q9EQZ7.1|RIMS2_MOUSE2.083e-1262.16RecName: Full=Regulating synaptic membrane exocyto... [more]
gi|34395746|sp|Q9JIS1.1|RIMS2_RAT1.532e-1160.87RecName: Full=Regulating synaptic membrane exocyto... [more]
gi|34395763|sp|Q86UR5.1|RIMS1_HUMAN3.080e-1060.87RecName: Full=Regulating synaptic membrane exocyto... [more]
gi|34395745|sp|Q9JIR4.1|RIMS1_RAT1.650e-959.42RecName: Full=Regulating synaptic membrane exocyto... [more]
back to top
BLAST of EMLSAG00000000022 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000022 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000022 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1004supercontigLSalAtl2s1004:92038..93364 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap-LSalAtl2s1004-processed-gene-0.16
Biotypeprotein_coding
EvidenceIEA
NoteRegulating synaptic membrane exocytosis protein 2
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000022 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000022EMLSAT00000000022-695869Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1004:92038..93364-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000022-682788 ID=EMLSAG00000000022-682788|Name=EMLSAG00000000022|organism=Lepeophtheirus salmonis|type=gene|length=1327bp|location=Sequence derived from alignment at LSalAtl2s1004:92038..93364- (Lepeophtheirus salmonis)
ATGCCGGATCCCAGCATCGACAATATCATATCATCAAACCCTCCTCCTCA
CCATTTTCCATATACACCTCGTCAAGCACCGCCATTTACTCATCAACGAC
CATTTTATCCAAGGTAAGAAAATGTACTTAATCCACAATAGCGTTTTTTT
CCGGGATCCCGTTGTCTCAGAATTTACACCAATGGGAAATCATTCATTTC
ATTATTTCATAATATAGGCTTAATTTAAACTAAAAATTAAGCCATAAATA
TAAACATATGTCCGGTAATTGATTTGTAAACTGTTCCATGACGTCACATA
TGTTTCATATTTATATTTATTTAGAGTGTTTTTGAAGTGGTATGAAATGT
TGCATTTTAAATATCTATTATTTTTATCAAATGAATTACAGTGATACGGT
AGTTGACTTTTAGCCGAGACTCGGTAAAGAAATGAGAACCCGCGTGCTCA
CTAATTCTATTGTATTGACTAAATTAACTAAGATATCTTTAATTCTCAAC
AGATTCCCTCGAGGACAACAGCTATCGAGACAAAGATCTCTTGAGGGAGG
ATTTCCATCATCAGCCTCATCTTCTGCTTCGTCCACAGCTGGAGGTGGTA
TSCATCATCTKCCATCATCAATTATRCCARCCCCAKCAGCCTCTATCTCC
TCTAATAGAGGAGGTACGCCACGCCGTTTAAGTGAGGGAGAACCACCTCG
WTTGTTTCGRTATCCATATCAGCATYGAGGCGGCAGCCGCATGCCTCCRC
CAAGTTATCGTAMGCGCCATCCTCCATCATCTTGGGGTCGAGAATCTCTC
TCAGCCCCTGAAGACAACATTCCGCGTCATCATAGTCGTGATCTGTATCC
TCGAGTTCTTGTCTCAGAAGGAGAATCCAGGGATCAATGTACTCCTTTAT
TTGATCCCGAAACGGGTCAACCATCACTCAATGGTGGTGGAAATCAAAAT
CGGCGTCGGATGATGGGACTTCATTACCGAAGAAATGACTCACTTTCATC
GGATCAAAGTGAGTGTGTCCGACCACCGCCCCCAAAGCCCCACAAACGAA
AGACMCATCTTCATCACCCCCATTCAGAAAAAGGACTCATACTGCTTTCA
TCTTCAGAGGAGGAGCTACAATCCACACCTGACTGCACAACATCATGCGA
AGAATTTGAAAGTGAATCCATTTCCGAAAAAGGTAAGAGGTTGAGGGGTT
TTTATTTAATTATATATATAATAATGTTCCGTTGAAGCACGTCTCTTCTC
CATAAGAAGGAGAATATATGTACATATTTGCCTTTTGTTTCCTTTTGCAT
TCGTTAGATTCCCAAAATATGAATTGA
back to top
Add to Basket