EMLSAG00000000024, EMLSAG00000000024-682790 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000024
Unique NameEMLSAG00000000024-682790
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:Q52V24 "Hepatopancreas trypsin" species:6717 "Pontastacus leptodactylus" [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0046872 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 PDB:4BNR PDBsum:4BNR EMBL:AY906961 PDB:2F91 PDBsum:2F91 IntAct:Q52V24 MEROPS:S01.035 EvolutionaryTrace:Q52V24 Uniprot:Q52V24)

HSP 1 Score: 52.373 bits (124), Expect = 2.583e-8
Identity = 35/94 (37.23%), Postives = 43/94 (45.74%), Query Frame = 0
Query:    7 MNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYD----------------------ARYGTNE---TMICAAAPR--KDSCQ 73
            ++ DI LLK      FND   P+ALPE      GDV++TGWGT  +                      A YG +E   +MICA  P   KDSCQ
Sbjct:   93 LDNDISLLKLSGSLTFNDNVAPIALPEQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQ 186          
BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:CG31265 species:7227 "Drosophila melanogaster" [GO:0004252 "serine-type endopeptidase activity" evidence=ISS;NAS] [GO:0006508 "proteolysis" evidence=IEA;NAS] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 OrthoDB:EOG7MKW6Q EMBL:AY070950 UniGene:Dm.6198 ProteinModelPortal:Q8MTU7 STRING:7227.FBpp0082843 MEROPS:S01.A97 PaxDb:Q8MTU7 PRIDE:Q8MTU7 FlyBase:FBgn0051265 InParanoid:Q8MTU7 Bgee:Q8MTU7 Uniprot:Q8MTU7)

HSP 1 Score: 42.743 bits (99), Expect = 8.412e-5
Identity = 21/58 (36.21%), Postives = 34/58 (58.62%), Query Frame = 0
Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTN 58
            M+    M+ DI L+K      FN+  +P+ALP   ++   ++VLTGWG+  D  YG++
Sbjct:  121 MYDQPYMHNDIALVKLTENITFNELTQPIALPTRPVQLGEEIVLTGWGS--DVAYGSS 176          
BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:PRSS2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 OrthoDB:EOG75B84T TreeFam:TF331065 GeneTree:ENSGT00740000115192 Ensembl:ENSGALT00000030486 Uniprot:F1NP19)

HSP 1 Score: 40.817 bits (94), Expect = 2.096e-4
Identity = 19/66 (28.79%), Postives = 35/66 (53.03%), Query Frame = 0
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTNETMICAAAP 67
            + S+ +N DI L+K  S  +++   +P+ALP +  +   + +++GWG      Y   E + C  AP
Sbjct:   33 YSSITLNNDIMLIKLASAVEYSADIQPIALPSSCAKAGTECLISGWGNTLSNGYNYPELLQCLNAP 98          
BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:Q90629 "Trypsin II-P29" species:9031 "Gallus gallus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA] [GO:0007586 "digestion" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0005615 GO:GO:0046872 GO:GO:0007586 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304 HOGENOM:HOG000251820 KO:K01312 CTD:5645 EMBL:U15157 PIR:S55066 RefSeq:NP_990715.1 UniGene:Gga.10164 ProteinModelPortal:Q90629 SMR:Q90629 PaxDb:Q90629 GeneID:396344 KEGG:gga:396344 InParanoid:Q90629 NextBio:20816392 PRO:PR:Q90629 Uniprot:Q90629)

HSP 1 Score: 40.0466 bits (92), Expect = 5.303e-4
Identity = 19/66 (28.79%), Postives = 35/66 (53.03%), Query Frame = 0
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTNETMICAAAP 67
            + S+ +N DI L+K  S  +++   +P+ALP +  +   + +++GWG      Y   E + C  AP
Sbjct:  101 YSSITLNNDIMLIKLASAVEYSADIQPIALPSSCAKAGTECLISGWGNTLSNGYNYPELLQCLNAP 166          
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592915793|gb|GAXK01042582.1| (TSA: Calanus finmarchicus comp212969_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 8.993e-4
Identity = 28/93 (30.11%), Postives = 40/93 (43.01%), Query Frame = 0
Query:    9 YDICLLKSKSREDFNDKGKPVALPENYLEF-NGDVVLTGWGTIY------------DARYGTNET---------------MICAAAPRKDSCQ 73
            +DI +L+ K R  FN    P+ LP++  E+ N    + GWGTIY            + R   N T               M+CA   +KD+CQ
Sbjct:  256 HDIAILRLKMRATFNKSIWPIGLPQSTSEYTNTRAFVLGWGTIYFGGPLSDILQEVNLRIWDNPTCKYNYEMLDRVITDNMMCAGDTKKDACQ 534          
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592778098|gb|GAXK01176470.1| (TSA: Calanus finmarchicus comp3490_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 6.273e-3
Identity = 29/104 (27.88%), Postives = 44/104 (42.31%), Query Frame = 0
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNG--DVVLTGWGTIYD-----------------------ARYGTN-----ETMICAAAPR--KDSCQ 73
            + S  +  D CLLK K   +F +  +P+ALP +  +     +  +TGWGT+ +                       A YG +     ++MICA      KDSCQ
Sbjct:  368 YASATITNDACLLKLKESLEFTEFVQPIALPASGQDTPAGTECTVTGWGTLSEGGFGLPNVLHKVTVPVVSDEDCNASYGASGYSVADSMICAGVEEGGKDSCQ 679          
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592918135|gb|GAXK01040240.1| (TSA: Calanus finmarchicus comp146195_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 6.434e-3
Identity = 25/98 (25.51%), Postives = 38/98 (38.78%), Query Frame = 0
Query:    6 GMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVV-LTGWGTIYDA-----------------------RYGTNET------MICAAAPRKDSCQ 73
            G   D  ++K  +   F+D  +P+ LP     ++ ++  +TGWG  Y                         +Y  N+       MICA  P KDSCQ
Sbjct:  382 GSTNDFAIIKLSTPVMFDDSTQPICLPNPNTNYDDNLAEVTGWGETYTVPADDLMTVNVTTMTNEECQELHDKYAPNQNAVIDSNMICAGDPGKDSCQ 675          
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592753767|gb|GAXK01200646.1| (TSA: Calanus finmarchicus comp365683_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 6.582e-3
Identity = 20/50 (40.00%), Postives = 28/50 (56.00%), Query Frame = 0
Query:    3 GSLGMNYDICLLKSKSREDFNDKG--KPVALPENYLE--FNGDVVLTGWG 48
            G  G  YD  L++   R DFN     +PV LPE+  +  FN D +++GWG
Sbjct:  586 GQKGAWYDFALIELSERVDFNRHPHIRPVCLPESGEKDYFNEDAIVSGWG 735          
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592778099|gb|GAXK01176469.1| (TSA: Calanus finmarchicus comp3490_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 7.913e-3
Identity = 21/76 (27.63%), Postives = 29/76 (38.16%), Query Frame = 0
Query:   23 NDKGKPVALPENYLEFNGDVVLTGWGTIYDARYG-------------------------TNETMICAAAPRKDSCQ 73
            N+   PV LPE   +  G   ++GWGT++    G                           E+M+CA    KDSCQ
Sbjct:  455 NENVAPVTLPEAMQQTEGSCTVSGWGTLHSGDSGLPSKLMKVDVPVVTDQTCKIEYPLQIAESMLCAGEHGKDSCQ 682          
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592859562|gb|GAXK01098000.1| (TSA: Calanus finmarchicus comp38145_c4_seq2 transcribed RNA sequence)

HSP 1 Score: 34.2686 bits (77), Expect = 2.109e-2
Identity = 27/101 (26.73%), Postives = 39/101 (38.61%), Query Frame = 0
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEF-NGDVVLTGWGTI------------YDARYGTN----------------ETMICAAAPRKDSCQ 73
            + S G N D  +++      F+    P  LP++   + N    +TGWGT+             D R  +N                  MICA+ P KDSCQ
Sbjct:  426 YNSNGNNNDFAIVRLSKDVTFSKTVMPACLPDSTKNYDNVAATVTGWGTLSSGGYQPSVLYEVDLRTQSNAQCTSSATAYSSSDITSNMICASNPGKDSCQ 728          
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592942310|gb|GAXK01016243.1| (TSA: Calanus finmarchicus comp4948996_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.113 bits (74), Expect = 3.687e-2
Identity = 22/87 (25.29%), Postives = 36/87 (41.38%), Query Frame = 0
Query:   10 DICLLKSKSREDFNDKGKPVALPENYLEFNGDVV-LTGWGTI-YDARYGT---------------------NETMICAAAPRKDSCQ 73
            D  +++      F++   P+ LP     ++  +  +TGWG++ Y   Y T                        MICA++P KDSCQ
Sbjct:  232 DFAIIQLSRDVKFSNTIMPICLPNPSTNYDNRITTVTGWGSLSYKGSYPTVLQEVDVKTVTNAACSNKYYITSNMICASSPGKDSCQ 492          
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592843345|gb|GAXK01114199.1| (TSA: Calanus finmarchicus comp3446942_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.3426 bits (72), Expect = 7.335e-2
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 0
Query:    7 MNYDICLLKSKSREDFNDKG--KPVALPENYLEF--NGDVVLTGWGTI 50
            +N D+CLLK  +   F D    +PV LP N      N + + TGWG +
Sbjct:  252 LNNDVCLLKLSTPISFPDHPLVRPVCLPPNSQTQYGNDEAIATGWGKV 395          
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592767678|gb|GAXK01186890.1| (TSA: Calanus finmarchicus comp439630_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.9574 bits (71), Expect = 8.934e-2
Identity = 21/49 (42.86%), Postives = 25/49 (51.02%), Query Frame = 0
Query:    8 NYDICLLKSKSREDFND--KGKPVALP----ENYLEFNGDVVLTGWGTI 50
            NYD  LLK K   DF      +P+ LP     NY +F   V  TGWGT+
Sbjct:  362 NYDFSLLKMKKTVDFTKYPHIRPICLPVDANNNYNDFVATV--TGWGTL 502          
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592877485|gb|GAXK01080251.1| (TSA: Calanus finmarchicus comp392318_c0_seq8 transcribed RNA sequence)

HSP 1 Score: 31.187 bits (69), Expect = 2.248e-1
Identity = 14/48 (29.17%), Postives = 24/48 (50.00%), Query Frame = 0
Query:    7 MNYDICLLKSKSREDFNDKGKPVALPENYLEFNG-DVVLTGWGTIYDA 53
             N D+ L+K      F++  +PV LP     +NG +  + GWG + + 
Sbjct:  349 FNNDLALIKLNREVQFSESIRPVCLPATDRSYNGQNTTVVGWGKLREG 492          
BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000002537 (pep:novel supercontig:LSalAtl2s:LSalAtl2s14:637103:638071:-1 gene:EMLSAG00000002537 transcript:EMLSAT00000002537 description:"maker-LSalAtl2s14-augustus-gene-6.12")

HSP 1 Score: 45.8246 bits (107), Expect = 1.810e-7
Identity = 34/98 (34.69%), Postives = 45/98 (45.92%), Query Frame = 0
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWG-----------------TIYDAR-----YGTN--ETMICAAA--PRKDSCQ 73
            FG+ G+N DIC+L  +    FNDK   V LP+    F G  V++GWG                 T+ D++     +G N  ETMICA      K SC 
Sbjct:  113 FGTNGLNNDICVLILEEPFVFNDKVDKVKLPKQDQAFEGKAVVSGWGSRIEGFPGSFKLFKAELTLLDSKKCHQLFGDNFDETMICANGVDEMKGSCH 210          
BLAST of EMLSAG00000000024 vs. Select Arthropod Genomes
Match: gb|EFA05680.2| (serine protease P151 [Tribolium castaneum])

HSP 1 Score: 46.9802 bits (110), Expect = 4.374e-7
Identity = 24/47 (51.06%), Postives = 30/47 (63.83%), Query Frame = 0
Query:    3 GSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGT 49
            G +G N DI LLK  +  +F D  +P+ LPE   EF GD VLTGWG+
Sbjct:  117 GRVGPN-DIALLKLATPLEFGDLVQPIGLPEPGSEFTGDSVLTGWGS 162          
BLAST of EMLSAG00000000024 vs. nr
Match: gi|71534671|emb|CAH61268.1| (putative trypsin [Lepeophtheirus salmonis])

HSP 1 Score: 86.2705 bits (212), Expect = 7.428e-19
Identity = 55/97 (56.70%), Postives = 60/97 (61.86%), Query Frame = 0
Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGTN-ETMICAAAPRKDSCQ 73
            MFGSLGMNYDICLLK KS  D N+K KPVALP+   EF GDVV++GWGTI                        DA YG+N ET ICAAAP KDSCQ
Sbjct:  122 MFGSLGMNYDICLLKLKSSLDLNEKVKPVALPKKDQEFTGDVVVSGWGTISSNGLSSPVLRSVTVQVVSDEYCSDAYYGSNDETNICAAAPGKDSCQ 218          
BLAST of EMLSAG00000000024 vs. nr
Match: gi|71534669|emb|CAH61460.1| (trypsin [Lepeophtheirus salmonis])

HSP 1 Score: 80.8777 bits (198), Expect = 6.654e-17
Identity = 52/96 (54.17%), Postives = 58/96 (60.42%), Query Frame = 0
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYG-TNETMICAAAPRKDSCQ 73
            FGS G NYD+CLLK KS  D N+K KPVALPE   EF GDVV++GWGTI                        DA +G T+ETMICAAAP KDSCQ
Sbjct:  108 FGSHGTNYDVCLLKLKSSLDLNEKVKPVALPEKDQEFTGDVVVSGWGTIASNGPSSPVLRSVTVHVVSDEDCSDAYFGSTDETMICAAAPGKDSCQ 203          
BLAST of EMLSAG00000000024 vs. nr
Match: gi|46398231|gb|AAS91793.1| (intestinal trypsin 2 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 80.4925 bits (197), Expect = 8.754e-17
Identity = 52/96 (54.17%), Postives = 58/96 (60.42%), Query Frame = 0
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYG-TNETMICAAAPRKDSCQ 73
            FGS G NYD+CLLK KS  D N+K KPVALPE   EF GDVV++GWGTI                        DA +G T+ETMICAAAP KDSCQ
Sbjct:  108 FGSHGTNYDVCLLKLKSSLDLNEKVKPVALPEKDQEFTGDVVVSGWGTIASNGPSSPVLRSVTVHVVSDEDCSDAYFGSTDETMICAAAPGKDSCQ 203          
BLAST of EMLSAG00000000024 vs. nr
Match: gi|71534672|emb|CAH61269.1| (putative trypsin [Lepeophtheirus salmonis])

HSP 1 Score: 79.7221 bits (195), Expect = 1.666e-16
Identity = 52/96 (54.17%), Postives = 57/96 (59.38%), Query Frame = 0
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYG-TNETMICAAAPRKDSCQ 73
            FGS G NYD+CLLK KS  D N+K KPVALPE   EF GDVV+ GWGTI                        DA +G T+ETMICAAAP KDSCQ
Sbjct:  108 FGSHGTNYDVCLLKLKSSLDLNEKVKPVALPEKDQEFTGDVVVXGWGTIASNGPSSPVLRSVTVHVVSDEDCSDAYFGSTDETMICAAAPGKDSCQ 203          
BLAST of EMLSAG00000000024 vs. nr
Match: gi|71534685|emb|CAH61089.1| (putative trypsin, partial [Lepeophtheirus salmonis])

HSP 1 Score: 78.9518 bits (193), Expect = 1.797e-16
Identity = 45/91 (49.45%), Postives = 52/91 (57.14%), Query Frame = 0
Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAP 67
            MF S G NYD+CLLK KS   FN+K KP+ALPE   EF GDV ++GWGTI                        DA YG+ +ETMICAAAP
Sbjct:  120 MFASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVDVSGWGTISSSGPASPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAP 210          
BLAST of EMLSAG00000000024 vs. nr
Match: gi|71534687|emb|CAH61090.1| (putative trypsin, partial [Lepeophtheirus salmonis])

HSP 1 Score: 77.0258 bits (188), Expect = 7.746e-16
Identity = 44/90 (48.89%), Postives = 51/90 (56.67%), Query Frame = 0
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYD-----------------------ARYGT-NETMICAAAP 67
            F S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                         A YG+ +ETMICAAAP
Sbjct:  121 FASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPASPVVKAVTVQVVXDEDCSGAYYGSIDETMICAAAP 210          
BLAST of EMLSAG00000000024 vs. nr
Match: gi|71534696|emb|CAH61095.1| (trypsin, partial [Lepeophtheirus salmonis])

HSP 1 Score: 76.6406 bits (187), Expect = 1.377e-15
Identity = 50/91 (54.95%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYG-TNETMICAAAP 67
            MFGSLGMNYDICLLK KS  D N+K KPVALP+   EF GDVV++GWGTI                        DA +G T+ETMICAAAP
Sbjct:  120 MFGSLGMNYDICLLKLKSSLDLNEKVKPVALPKKDQEFTGDVVVSGWGTISSNGLSSPVLRSVTVQVVSDEYCSDAYFGSTDETMICAAAP 210          
BLAST of EMLSAG00000000024 vs. nr
Match: gi|225711372|gb|ACO11532.1| (Trypsin-1 [Caligus rogercresseyi])

HSP 1 Score: 76.6406 bits (187), Expect = 2.509e-15
Identity = 43/90 (47.78%), Postives = 52/90 (57.78%), Query Frame = 0
Query:    8 NYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIY-----------------------DARYGT-NETMICAAAPRKDSCQ 73
            NYD+CLLK KS   FNDK K V+LP+   EF GD+V++GWGT+Y                       DA  G  +ETM+CAAAP KDSCQ
Sbjct:  114 NYDVCLLKLKSSLYFNDKIKAVSLPKKDEEFKGDLVVSGWGTLYAGGPSSDELRAVTVQVVSDEDCKDAYPGMIDETMMCAAAPGKDSCQ 203          
BLAST of EMLSAG00000000024 vs. nr
Match: gi|71534694|emb|CAH61094.1| (putative trypsin, partial [Lepeophtheirus salmonis])

HSP 1 Score: 75.0998 bits (183), Expect = 5.672e-15
Identity = 50/91 (54.95%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGTN-ETMICAAAP 67
            MFGSLGMNYDICLLK KS  D N+K KPVALP+   EF GDVV++GWGTI                        DA YG+N ET ICAAAP
Sbjct:  120 MFGSLGMNYDICLLKLKSSLDLNEKVKPVALPKKDQEFTGDVVVSGWGTISSNGLSSPVLRSVTVQVVSDEYCSDAYYGSNDETNICAAAP 210          
BLAST of EMLSAG00000000024 vs. nr
Match: gi|71534689|emb|CAH61091.1| (putative trypsin, partial [Lepeophtheirus salmonis])

HSP 1 Score: 69.707 bits (169), Expect = 4.474e-13
Identity = 46/90 (51.11%), Postives = 52/90 (57.78%), Query Frame = 0
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYG-TNETMICAAAP 67
            FGS G NYD+CLLK KS  D N+K KPVALPE   EF GDVV++GWGTI                        DA +G T+ETMICA AP
Sbjct:  106 FGSHGTNYDVCLLKLKSSLDLNEKVKPVALPEKDQEFTGDVVVSGWGTISSNGPSSPVLRSVTVHVVSDEDCSDAYFGSTDETMICATAP 195          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000024 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 4
Match NameE-valueIdentityDescription
-2.583e-837.23symbol:Q52V24 "Hepatopancreas trypsin" species:671... [more]
-8.412e-536.21symbol:CG31265 species:7227 "Drosophila melanogast... [more]
-2.096e-428.79symbol:PRSS2 "Uncharacterized protein" species:903... [more]
-5.303e-428.79symbol:Q90629 "Trypsin II-P29" species:9031 "Gallu... [more]
back to top
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592915793|gb|GAXK01042582.1|8.993e-430.11TSA: Calanus finmarchicus comp212969_c1_seq1 trans... [more]
gi|592778098|gb|GAXK01176470.1|6.273e-327.88TSA: Calanus finmarchicus comp3490_c3_seq1 transcr... [more]
gi|592918135|gb|GAXK01040240.1|6.434e-325.51TSA: Calanus finmarchicus comp146195_c0_seq1 trans... [more]
gi|592753767|gb|GAXK01200646.1|6.582e-340.00TSA: Calanus finmarchicus comp365683_c0_seq2 trans... [more]
gi|592778099|gb|GAXK01176469.1|7.913e-327.63TSA: Calanus finmarchicus comp3490_c0_seq1 transcr... [more]
gi|592859562|gb|GAXK01098000.1|2.109e-226.73TSA: Calanus finmarchicus comp38145_c4_seq2 transc... [more]
gi|592942310|gb|GAXK01016243.1|3.687e-225.29TSA: Calanus finmarchicus comp4948996_c0_seq1 tran... [more]
gi|592843345|gb|GAXK01114199.1|7.335e-237.50TSA: Calanus finmarchicus comp3446942_c0_seq1 tran... [more]
gi|592767678|gb|GAXK01186890.1|8.934e-242.86TSA: Calanus finmarchicus comp439630_c0_seq1 trans... [more]
gi|592877485|gb|GAXK01080251.1|2.248e-129.17TSA: Calanus finmarchicus comp392318_c0_seq8 trans... [more]

Pages

back to top
BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 11
Match NameE-valueIdentityDescription
EMLSAP000000025371.810e-734.69pep:novel supercontig:LSalAtl2s:LSalAtl2s14:637103... [more]

Pages

back to top
BLAST of EMLSAG00000000024 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000024 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
gb|EFA05680.2|4.374e-751.06serine protease P151 [Tribolium castaneum][more]
back to top
BLAST of EMLSAG00000000024 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|71534671|emb|CAH61268.1|7.428e-1956.70putative trypsin [Lepeophtheirus salmonis][more]
gi|71534669|emb|CAH61460.1|6.654e-1754.17trypsin [Lepeophtheirus salmonis][more]
gi|46398231|gb|AAS91793.1|8.754e-1754.17intestinal trypsin 2 precursor [Lepeophtheirus sal... [more]
gi|71534672|emb|CAH61269.1|1.666e-1654.17putative trypsin [Lepeophtheirus salmonis][more]
gi|71534685|emb|CAH61089.1|1.797e-1649.45putative trypsin, partial [Lepeophtheirus salmonis... [more]
gi|71534687|emb|CAH61090.1|7.746e-1648.89putative trypsin, partial [Lepeophtheirus salmonis... [more]
gi|71534696|emb|CAH61095.1|1.377e-1554.95trypsin, partial [Lepeophtheirus salmonis][more]
gi|225711372|gb|ACO11532.1|2.509e-1547.78Trypsin-1 [Caligus rogercresseyi][more]
gi|71534694|emb|CAH61094.1|5.672e-1554.95putative trypsin, partial [Lepeophtheirus salmonis... [more]
gi|71534689|emb|CAH61091.1|4.474e-1351.11putative trypsin, partial [Lepeophtheirus salmonis... [more]

Pages

back to top
BLAST of EMLSAG00000000024 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1005supercontigLSalAtl2s1005:18324..18734 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1005-snap-gene-0.11
Biotypeprotein_coding
EvidenceIEA
Notetrypsin 1c, partial [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000024 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000024EMLSAT00000000024-695871Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1005:18324..18734-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000024-682790 ID=EMLSAG00000000024-682790|Name=EMLSAG00000000024|organism=Lepeophtheirus salmonis|type=gene|length=411bp|location=Sequence derived from alignment at LSalAtl2s1005:18324..18734- (Lepeophtheirus salmonis)
ATGTTTGGATCCCTGGGCATGAACTATGACATTTGTCTTTTGAAATCAAA GTCCAGGGAGGACTTCAACGAGTAAAAACTAAATCATACCATTTCTTTTT TAAATAGTTAATAACTATTGTTTATTAAGTAAAGGCAAGCCTGTTGCTCT CCCAGAAAATTACCTAGAATTCAACGGTGATGTTGTTTTGACCGGATGGG GAACTATCTAGTACAGTGGCCCACCTTTTCCAGTCTTTAGGTCAGTTACT TTCCATGTTGTTTCTGATGATGGAGACAATAAAAATAATATTTATACCTT GAAAAGAAATTTACATCTATAAATTATATTAAAATAGACTGAAGCGATGC CCGCTATGGTACTAATGAGACTATGATATGTGCTGCTGCTCCCCGAAAGG ACTCCTGCCAA
back to top
Add to Basket