EMLSAG00000000174, EMLSAG00000000174-682940 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000174
Unique NameEMLSAG00000000174-682940
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:An14g00980 "Similarities to database proteins" species:425011 "Aspergillus niger CBS 513.88" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002867 Pfam:PF01485 GO:GO:0008270 EMBL:AM270311 RefSeq:XP_001400727.1 ProteinModelPortal:A2R2J7 EnsemblFungi:CADANGAT00011034 GeneID:4986952 KEGG:ang:ANI_1_1090124 HOGENOM:HOG000170874 OrthoDB:EOG72G1GV Uniprot:A2R2J7)

HSP 1 Score: 51.9878 bits (123), Expect = 2.340e-7
Identity = 18/40 (45.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query:    4 AVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQP 43
            AV R C  C   + K+ GCN++ C+CG  MCY+C+K + P
Sbjct:  520 AVKRTCPRCGLSFVKSSGCNKLTCVCGYSMCYLCRKALGP 559          
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:An14g00980 species:5061 "Aspergillus niger" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002867 Pfam:PF01485 GO:GO:0008270 EMBL:AM270311 RefSeq:XP_001400727.1 ProteinModelPortal:A2R2J7 EnsemblFungi:CADANGAT00011034 GeneID:4986952 KEGG:ang:ANI_1_1090124 HOGENOM:HOG000170874 OrthoDB:EOG72G1GV Uniprot:A2R2J7)

HSP 1 Score: 51.9878 bits (123), Expect = 2.340e-7
Identity = 18/40 (45.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query:    4 AVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQP 43
            AV R C  C   + K+ GCN++ C+CG  MCY+C+K + P
Sbjct:  520 AVKRTCPRCGLSFVKSSGCNKLTCVCGYSMCYLCRKALGP 559          
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:ASPNIDRAFT_210921 "Uncharacterized protein" species:380704 "Aspergillus niger ATCC 1015" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002867 Pfam:PF01485 GO:GO:0008270 OrthoDB:EOG72G1GV EMBL:ACJE01000002 Uniprot:G3XNJ3)

HSP 1 Score: 51.6026 bits (122), Expect = 2.617e-7
Identity = 18/40 (45.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query:    4 AVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQP 43
            AV R C  C   + K+ GCN++ C+CG  MCY+C+K + P
Sbjct:  520 AVKRTCPRCGLSFVKSSGCNKLTCVCGYSMCYLCRKALGP 559          
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:AN1143.2 "RING finger protein (Zin), putative (AFU_orthologue AFUA_4G03910)" species:227321 "Aspergillus nidulans FGSC A4" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR001841 InterPro:IPR002867 Pfam:PF01485 SMART:SM00184 EMBL:AACD01000016 EMBL:BN001308 GO:GO:0008270 eggNOG:NOG330241 HOGENOM:HOG000170874 OrthoDB:EOG72G1GV OMA:KRVCPRC RefSeq:XP_658747.1 ProteinModelPortal:Q5BE87 EnsemblFungi:CADANIAT00001485 GeneID:2876922 KEGG:ani:AN1143.2 Uniprot:Q5BE87)

HSP 1 Score: 50.447 bits (119), Expect = 7.058e-7
Identity = 18/40 (45.00%), Postives = 25/40 (62.50%), Query Frame = 0
Query:    4 AVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQP 43
            AV R C  C   + K+ GCN++ C CG  MCY+C+K + P
Sbjct:  522 AVKRTCPRCGLSFVKSSGCNKLTCTCGYSMCYLCRKALGP 561          
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:AN1143 species:162425 "Aspergillus nidulans" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008150 "biological_process" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001841 InterPro:IPR002867 Pfam:PF01485 SMART:SM00184 EMBL:AACD01000016 EMBL:BN001308 GO:GO:0008270 eggNOG:NOG330241 HOGENOM:HOG000170874 OrthoDB:EOG72G1GV OMA:KRVCPRC RefSeq:XP_658747.1 ProteinModelPortal:Q5BE87 EnsemblFungi:CADANIAT00001485 GeneID:2876922 KEGG:ani:AN1143.2 Uniprot:Q5BE87)

HSP 1 Score: 50.447 bits (119), Expect = 7.058e-7
Identity = 18/40 (45.00%), Postives = 25/40 (62.50%), Query Frame = 0
Query:    4 AVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQP 43
            AV R C  C   + K+ GCN++ C CG  MCY+C+K + P
Sbjct:  522 AVKRTCPRCGLSFVKSSGCNKLTCTCGYSMCYLCRKALGP 561          
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:AFUA_4G03910 "RING finger protein (Zin), putative" species:330879 "Aspergillus fumigatus Af293" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002867 Pfam:PF01485 GO:GO:0008270 EMBL:AAHF01000016 HOGENOM:HOG000170874 OrthoDB:EOG72G1GV OMA:KRVCPRC RefSeq:XP_746578.1 ProteinModelPortal:Q4W9S3 EnsemblFungi:CADAFUAT00001397 GeneID:3503921 KEGG:afm:AFUA_4G03910 Uniprot:Q4W9S3)

HSP 1 Score: 49.6766 bits (117), Expect = 1.153e-6
Identity = 17/38 (44.74%), Postives = 25/38 (65.79%), Query Frame = 0
Query:    4 AVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKI 41
            AV R C  C   + K+ GCN++ C+CG  MCY+C+K +
Sbjct:  531 AVKRTCPRCGLSFVKSSGCNKLTCVCGYSMCYLCRKAL 568          
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:Afu4g03910 species:746128 "Aspergillus fumigatus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002867 Pfam:PF01485 GO:GO:0008270 EMBL:AAHF01000016 HOGENOM:HOG000170874 OrthoDB:EOG72G1GV OMA:KRVCPRC RefSeq:XP_746578.1 ProteinModelPortal:Q4W9S3 EnsemblFungi:CADAFUAT00001397 GeneID:3503921 KEGG:afm:AFUA_4G03910 Uniprot:Q4W9S3)

HSP 1 Score: 49.6766 bits (117), Expect = 1.153e-6
Identity = 17/38 (44.74%), Postives = 25/38 (65.79%), Query Frame = 0
Query:    4 AVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKI 41
            AV R C  C   + K+ GCN++ C+CG  MCY+C+K +
Sbjct:  531 AVKRTCPRCGLSFVKSSGCNKLTCVCGYSMCYLCRKAL 568          
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:MGG_06147 "Uncharacterized protein" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002867 Pfam:PF01485 EMBL:CM001233 GO:GO:0008270 OrthoDB:EOG72G1GV RefSeq:XP_003712025.1 ProteinModelPortal:G4MZY0 EnsemblFungi:MGG_06147T0 GeneID:2684251 KEGG:mgr:MGG_06147 Uniprot:G4MZY0)

HSP 1 Score: 48.1358 bits (113), Expect = 3.657e-6
Identity = 30/85 (35.29%), Postives = 40/85 (47.06%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKK-------KIQPNYDHFYDFPEKPEIGKCPL-QTNSEDLHHVERTSA 77
            M+ A+ R C  C   + K  GCN++ C CG +MCY+C+K            Y HF D   +PE    P  Q N  +L   E T A
Sbjct:  558 MSMAIKRVCPRCNTSFVKNAGCNKLTCPCGYKMCYVCRKDIGGTGDGDDVGYRHFCDH-FRPEGDPRPCDQCNKCNLWEAENTDA 641          
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:AN2162.2 "RING finger protein, putative (AFU_orthologue AFUA_2G15890)" species:227321 "Aspergillus nidulans FGSC A4" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002867 Pfam:PF01485 SMART:SM00647 EMBL:BN001307 GO:GO:0008270 EMBL:AACD01000034 eggNOG:NOG330241 KO:K11976 OrthoDB:EOG722JHZ HOGENOM:HOG000167418 RefSeq:XP_659766.1 ProteinModelPortal:Q5BBB8 EnsemblFungi:CADANIAT00008840 GeneID:2875446 KEGG:ani:AN2162.2 OMA:HENIEER Uniprot:Q5BBB8)

HSP 1 Score: 46.595 bits (109), Expect = 1.232e-5
Identity = 30/83 (36.14%), Postives = 40/83 (48.19%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCI-CGAQMCYICKKKI-QPNYDHFYDFPEKPEIGKCP---LQTNSEDLHHVERTSAA 78
            M+NA+ RKC  C     K  GCN++QC  C   MCY+C+K I +  Y HF         G CP   + T   D   ++R   A
Sbjct:  462 MSNALIRKCPKCRLKIIKEYGCNKMQCTKCHTLMCYVCQKDITKEGYAHFGR-------GGCPQDDIHTQDRDDREIQRAERA 537          
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:AN2162 species:162425 "Aspergillus nidulans" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002867 Pfam:PF01485 SMART:SM00647 EMBL:BN001307 GO:GO:0008270 EMBL:AACD01000034 eggNOG:NOG330241 KO:K11976 OrthoDB:EOG722JHZ HOGENOM:HOG000167418 RefSeq:XP_659766.1 ProteinModelPortal:Q5BBB8 EnsemblFungi:CADANIAT00008840 GeneID:2875446 KEGG:ani:AN2162.2 OMA:HENIEER Uniprot:Q5BBB8)

HSP 1 Score: 46.595 bits (109), Expect = 1.232e-5
Identity = 30/83 (36.14%), Postives = 40/83 (48.19%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCI-CGAQMCYICKKKI-QPNYDHFYDFPEKPEIGKCP---LQTNSEDLHHVERTSAA 78
            M+NA+ RKC  C     K  GCN++QC  C   MCY+C+K I +  Y HF         G CP   + T   D   ++R   A
Sbjct:  462 MSNALIRKCPKCRLKIIKEYGCNKMQCTKCHTLMCYVCQKDITKEGYAHFGR-------GGCPQDDIHTQDRDDREIQRAERA 537          
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592923318|gb|GAXK01035097.1| (TSA: Calanus finmarchicus comp110292_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 78.5666 bits (192), Expect = 6.652e-17
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQ 88
            M  A+ R C  C K + K +GCN++QC CG  MCY+C+K ++ +Y HFY     P  GKCPL +++ +LH  E   AA + +   D +
Sbjct: 1453 MTEAMVRACVRCKKRFFKDEGCNKMQCECGQSMCYLCRKPVENDYTHFYAQGASPVKGKCPLWSDNINLHKAEVMKAAEEAKKAVDGK 1716          
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592923319|gb|GAXK01035096.1| (TSA: Calanus finmarchicus comp110292_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 78.1814 bits (191), Expect = 7.661e-17
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQ 88
            M  A+ R C  C K + K +GCN++QC CG  MCY+C+K ++ +Y HFY     P  GKCPL +++ +LH  E   AA + +   D +
Sbjct: 1468 MTEAMVRACVRCKKRFYKDEGCNKMQCECGQSMCYLCRKPVENDYTHFYAQGASPVKGKCPLWSDNINLHKAEVMKAAEEAKKAVDGK 1731          
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592942599|gb|GAXK01015954.1| (TSA: Calanus finmarchicus comp204909_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 75.0998 bits (183), Expect = 1.069e-16
Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKP-EIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPR 93
            ++ A+ R+C  C K + K +GCNR+ C CGAQMCY+CK K+  +YDHFY    +P    KCPL ++++ LH  E ++AA K +        L R
Sbjct:  355 LSLAMLRQCWQCKKMFYKEEGCNRMTCTCGAQMCYLCKVKV-SSYDHFYGQGGQPTSEKKCPLWSDNKALHRQEVSAAAVKAKEELALSNDLSR 633          
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592942600|gb|GAXK01015953.1| (TSA: Calanus finmarchicus comp204909_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 73.559 bits (179), Expect = 2.336e-15
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEI-GKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPR 93
            ++ A+ R+C  C K + K +GCNR+ C CGAQMCY+CK K+  +YDHFY     P    KCPL ++ + LH  E ++AA K +        L R
Sbjct: 1031 LSLAMLRQCWQCKKMFYKEEGCNRMTCTCGAQMCYLCKVKVN-SYDHFYGQGGHPTTEKKCPLWSDIKALHRQEVSAAAVKAKEELALSNDLSR 1309          
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592774417|gb|GAXK01180151.1| (TSA: Calanus finmarchicus comp914971_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 1.207e-13
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    4 AVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAAR 79
            A+ R+C  C   + + DGCN++ C CGA  CYIC+K +  +Y HFY    +PE GKCPL T++  LH  E   A +
Sbjct:  235 AMVRECVKCNTRFLQEDGCNKMTCQCGATSCYICRKPV-ADYSHFYGQGGQPEPGKCPLYTDNVKLHRNEVKEAVQ 459          
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592774418|gb|GAXK01180150.1| (TSA: Calanus finmarchicus comp914971_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 1.474e-13
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    4 AVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAAR 79
            A+ R+C  C   + + DGCN++ C CGA  CYIC+K +  +Y HFY    +PE GKCPL T++  LH  E   A +
Sbjct:  278 AMVRECVKCNTRFLQEDGCNKMTCQCGATSCYICRKPV-ADYSHFYGQGGQPEPGKCPLYTDNVKLHRNEVKEAVQ 502          
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592812025|gb|GAXK01142543.1| (TSA: Calanus finmarchicus comp101206_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 61.6178 bits (148), Expect = 8.409e-12
Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGK-CPLQTNSEDLHHVERTSAARKTEATF 85
            +  A+ R+C  C   + K +GCN++ C CGA+MCY+CK +   +Y HFY     P   K CPL ++ + LH +E   AA + +   
Sbjct:   92 LTEAMLRECAKCKNKFYKEEGCNKMTCRCGAKMCYLCKME-GVDYSHFYGQGGTPTATKTCPLWSDHKVLHQMEVAKAAEEAKQQL 346          
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592812024|gb|GAXK01142544.1| (TSA: Calanus finmarchicus comp101206_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 60.077 bits (144), Expect = 2.126e-11
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 0
Query:   12 CAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGK-CPLQTNSEDLHHVERTSAARKTE 82
            C   + K +GCN++ C CGA+MCY+CKK++  +Y HFY     P   K CPL ++ + LH +E   AA + +
Sbjct:    4 CMNKFYKEEGCNKMTCSCGAKMCYLCKKEV-TDYSHFYGQGGTPTATKTCPLWSDHKVLHQMEVAKAAEEAK 216          
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592812018|gb|GAXK01142550.1| (TSA: Calanus finmarchicus comp101206_c8_seq1 transcribed RNA sequence)

HSP 1 Score: 58.151 bits (139), Expect = 6.487e-10
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCI---CGAQMCYICKKKIQPNYDHFYDFPEKPEIGK-CPLQTNSEDLHHVE 73
            ++ A+ R+C  C   Y K +GCN++ C    CGA+MCY+CK+ ++ +Y HFY     P   K CPL T+++ LH  E
Sbjct: 1493 LSEAMIRECWKCKAKYFKEEGCNKMTCPKPNCGAKMCYLCKQPVK-DYTHFYGQGGTPTATKTCPLWTDNKRLHEQE 1720          
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592812027|gb|GAXK01142541.1| (TSA: Calanus finmarchicus comp101206_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 58.151 bits (139), Expect = 7.556e-10
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCI---CGAQMCYICKKKIQPNYDHFYDFPEKPEIGK-CPLQTNSEDLHHVE 73
            ++ A+ R+C  C   Y K +GCN++ C    CGA+MCY+CK+ ++ +Y HFY     P   K CPL T+++ LH  E
Sbjct: 3252 LSEAMIRECWKCKAKYFKEEGCNKMTCPKPNCGAKMCYLCKQPVK-DYTHFYGQGGTPTATKTCPLWTDNKRLHEQE 3479          
BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Match: EMLSAP00000000174 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1025:66939:67244:-1 gene:EMLSAG00000000174 transcript:EMLSAT00000000174 description:"augustus_masked-LSalAtl2s1025-processed-gene-0.4")

HSP 1 Score: 211.46 bits (537), Expect = 8.595e-72
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
            MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY
Sbjct:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101          
BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Match: EMLSAP00000011518 (pep:novel supercontig:LSalAtl2s:LSalAtl2s799:200476:201189:-1 gene:EMLSAG00000011518 transcript:EMLSAT00000011518 description:"augustus_masked-LSalAtl2s799-processed-gene-2.0")

HSP 1 Score: 104.375 bits (259), Expect = 1.552e-28
Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    7 RKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFD 86
            RKC+ C K + K +GCNRI+C CGAQMCYIC+  + P+ DHFY+  E+PE GKCPLQ+NSEDLH +ER  A +K  ++ D
Sbjct:  141 RKCYRCEKYFQKYEGCNRIECHCGAQMCYICRSPVIPSQDHFYNCQEQPEPGKCPLQSNSEDLHSMERAIAGKKVVSSID 220          
BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Match: EMLSAP00000000189 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1029:145437:146295:-1 gene:EMLSAG00000000189 transcript:EMLSAT00000000189 description:"maker-LSalAtl2s1029-snap-gene-1.49")

HSP 1 Score: 99.7525 bits (247), Expect = 5.098e-27
Identity = 55/85 (64.71%), Postives = 61/85 (71.76%), Query Frame = 0
Query:   20 DGCNRIQC---ICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
            +G + I+C    C A  C  C+    P         E+PEIGKCPLQTNSEDLH+VERTSAARKTEATFDHQLSLPRPSTSYASY
Sbjct:  138 EGLDVIKCQYQYCKALTCIHCQLPAHPR--------EEPEIGKCPLQTNSEDLHNVERTSAARKTEATFDHQLSLPRPSTSYASY 214          
BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Match: EMLSAP00000008081 (pep:novel supercontig:LSalAtl2s:LSalAtl2s481:140168:142448:-1 gene:EMLSAG00000008081 transcript:EMLSAT00000008081 description:"maker-LSalAtl2s481-augustus-gene-1.16")

HSP 1 Score: 70.8626 bits (172), Expect = 1.984e-15
Identity = 36/89 (40.45%), Postives = 48/89 (53.93%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDL--HHVERTSAARKTEATFDH 87
            M  A+ R C  C   + K DGCN+I C CG  +CY+C+K I+  Y HFY      + G CPL +N+E L  + V R +A    EA  D 
Sbjct:  546 MTEALIRTCPKCQNKFFKEDGCNKITCTCGTNICYLCRKVIKTGYKHFYGQGADAQPGMCPLFSNNEKLMENDVARGAAEGIKEAEEDQ 634          
BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Match: EMLSAP00000011520 (pep:novel supercontig:LSalAtl2s:LSalAtl2s799:201864:202839:-1 gene:EMLSAG00000011520 transcript:EMLSAT00000011520 description:"maker-LSalAtl2s799-snap-gene-2.21")

HSP 1 Score: 66.6254 bits (161), Expect = 7.717e-15
Identity = 35/101 (34.65%), Postives = 54/101 (53.47%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
            M+ AV R+C++C KPY K +GCN ++C CGA+MCYIC+  ++  Y +           +C    N   LH +ER  A  +  +      SL    TS+A++
Sbjct:  140 MSEAVIRRCYSCKKPYQKFEGCNSVKCECGAKMCYICRTPLKGGYHN-------NRSRECSSSVNMVSLHEIERRKAEEEARS------SLGATGTSFANF 227          
BLAST of EMLSAG00000000174 vs. SwissProt
Match: gi|57015417|sp|Q9NWF9.3|RN216_HUMAN (RecName: Full=E3 ubiquitin-protein ligase RNF216; AltName: Full=RING finger protein 216; AltName: Full=Triad domain-containing protein 3; AltName: Full=Ubiquitin-conjugating enzyme 7-interacting protein 1; AltName: Full=Zinc finger protein inhibiting NF-kappa-B)

HSP 1 Score: 62.7734 bits (151), Expect = 8.647e-12
Identity = 32/70 (45.71%), Postives = 39/70 (55.71%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKP-----EIGKCPLQTN 65
            M  A  RKCH C     K++GCNR+ C CGAQMCY+C+  I   YDHF   P  P     E  +C L T+
Sbjct:  667 MTAARIRKCHKCGTGLIKSEGCNRMSCRCGAQMCYLCRVSIN-GYDHFCQHPRSPGAPCQECSRCSLWTD 735          
BLAST of EMLSAG00000000174 vs. SwissProt
Match: gi|57015377|sp|P58283.3|RN216_MOUSE (RecName: Full=E3 ubiquitin-protein ligase RNF216; AltName: Full=RING finger protein 216; AltName: Full=Triad domain-containing protein 3; AltName: Full=UbcM4-interacting protein 83; AltName: Full=Ubiquitin-conjugating enzyme 7-interacting protein 1)

HSP 1 Score: 62.7734 bits (151), Expect = 9.071e-12
Identity = 32/70 (45.71%), Postives = 39/70 (55.71%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKP-----EIGKCPLQTN 65
            M  A  RKCH C     K++GCNR+ C CGAQMCY+C+  I   YDHF   P  P     E  +C L T+
Sbjct:  655 MTAARIRKCHKCGTGLIKSEGCNRMSCRCGAQMCYLCRVSIN-GYDHFCQHPRSPGAPCQECSRCSLWTD 723          
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: EEB18254.1 (E3 ubiquitin ligase triad3, putative [Pediculus humanus corporis])

HSP 1 Score: 69.3218 bits (168), Expect = 2.288e-14
Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLH 70
            M  A+ R C+ C K + K DGCN++ C CGA+MCY+C+K +Q +Y HF +     E  KCPL + +++LH
Sbjct:  754 MTEALVRTCYKCGKKFVKEDGCNKMTCTCGAKMCYVCRKPVQ-DYSHF-NGQGGTEYEKCPLYSTNDELH 821          
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: EFX87807.1 (hypothetical protein DAPPUDRAFT_306489 [Daphnia pulex])

HSP 1 Score: 68.9366 bits (167), Expect = 2.983e-14
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPE---------KPEIGKCPLQTNSEDLHHVERTSAARKTEATF 85
            M  A+ R+C +C K + K DGCN++ C CGA MCYIC+++I+ +Y+HF + P          KP   KCPL +++  +H  E   +A K  A  
Sbjct:  625 MTEALVRQCPSCKKNFVKADGCNKMVCPCGAIMCYICRQQIK-DYNHFSNLPPNQPNQPAPIKPPNAKCPLYSDTLKMHEEEVAISAAKARAEL 717          
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: gb|EFA00238.1| (hypothetical protein TcasGA2_TC003066 [Tribolium castaneum])

HSP 1 Score: 65.0846 bits (157), Expect = 7.356e-13
Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQT-NSEDLH--HVERTSAARKTEATFD 86
            M+ A  R C +C++ + K  GCN++ C+CGA+MCYICK  +Q +Y HF +       G+CPL T N + LH  +V R + A K +   D
Sbjct:  497 MSEAFLRTCPSCSRKFYKESGCNKMTCLCGAKMCYICKVAVQ-DYSHFGN-------GRCPLFTENLDQLHFDNVIRRAQAAKAQLGVD 577          
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: gb|EFA00239.2| (hypothetical protein TcasGA2_TC003067 [Tribolium castaneum])

HSP 1 Score: 62.003 bits (149), Expect = 7.511e-12
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERT 75
            M  A+ RKC  C+K + K  GCN++ C+CGA MCY+C + +  +Y HF         G+CPL T +    H+ R 
Sbjct:  475 MTEALLRKCWKCSKQFYKESGCNKMTCVCGAMMCYVCGEAV-TDYRHF-------GAGRCPLHTENLQQFHLTRV 541          
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: gb|KYB28776.1| (hypothetical protein TcasGA2_TC032478 [Tribolium castaneum])

HSP 1 Score: 57.3806 bits (137), Expect = 3.899e-10
Identity = 33/108 (30.56%), Postives = 50/108 (46.30%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHF-------YDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
            M  A+ RKC  C   + K +GCN++ C CGA MCYIC + +  +Y HF       YD         CPL +++ DL+       A + +A   + +    P+     Y
Sbjct:  827 MTEALLRKCWKCGVKFFKEEGCNKMTCSCGASMCYICGQPVT-DYKHFNGNGGDRYDL--------CPLYSDTHDLNKDNVLKGAAQAKAELGNVMLKHDPTKDVQEY 925          
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: gb|KYB28775.1| (hypothetical protein TcasGA2_TC032478 [Tribolium castaneum])

HSP 1 Score: 56.9954 bits (136), Expect = 4.177e-10
Identity = 33/108 (30.56%), Postives = 50/108 (46.30%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHF-------YDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
            M  A+ RKC  C   + K +GCN++ C CGA MCYIC + +  +Y HF       YD         CPL +++ DL+       A + +A   + +    P+     Y
Sbjct:  843 MTEALLRKCWKCGVKFFKEEGCNKMTCSCGASMCYICGQPVT-DYKHFNGNGGDRYDL--------CPLYSDTHDLNKDNVLKGAAQAKAELGNVMLKHDPTKDVQEY 941          
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: EEB18224.1 (E3 ubiquitin ligase triad3, putative [Pediculus humanus corporis])

HSP 1 Score: 55.4546 bits (132), Expect = 1.558e-9
Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYD 50
            M   + R C  C + + K DGCN+I C CG   CYIC+K+IQ +Y HF D
Sbjct:  516 MTKKLLRTCPNCGQKFIKIDGCNKITCTCGTLACYICQKQIQ-DYTHFSD 564          
BLAST of EMLSAG00000000174 vs. nr
Match: gi|1067086346|ref|XP_018027113.1| (PREDICTED: E3 ubiquitin-protein ligase RNF216-like, partial [Hyalella azteca])

HSP 1 Score: 80.4925 bits (197), Expect = 1.140e-15
Identity = 42/107 (39.25%), Postives = 58/107 (54.21%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIG--------KCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYA 99
            M  A+ R+C+ C K + K +GCN++QC+CGA+MCY+CKK I   YDHF D P +   G        KCP  ++S  LH  E    A + + T D  + L    T Y 
Sbjct:  446 MTEAMVRECYKCGKRFIKEEGCNKMQCLCGAKMCYVCKKPIT-GYDHFDDGPYRATAGDLLPSQRSKCPKYSDSRKLHAEEVKRKAEEAKKTLDPDVQLKHDPTKYV 551          
BLAST of EMLSAG00000000174 vs. nr
Match: gi|939646387|ref|XP_014273038.1| (PREDICTED: E3 ubiquitin-protein ligase RNF216-like [Halyomorpha halys])

HSP 1 Score: 79.337 bits (194), Expect = 2.635e-15
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARK 80
            M  A+ R C+ C   + + DGCN++ C CGA+MCY+C+K I   Y+HF D  ++   GKCPL TN+ +LH VE    A K
Sbjct:  358 MTEALIRNCYRCGSKFIREDGCNKMTCHCGAKMCYVCRKPI-TGYNHFSDRNDRRYSGKCPLWTNNNNLHKVEVNLEAEK 436          
BLAST of EMLSAG00000000174 vs. nr
Match: gi|939688831|ref|XP_014288330.1| (PREDICTED: E3 ubiquitin-protein ligase RNF216-like [Halyomorpha halys])

HSP 1 Score: 72.7886 bits (177), Expect = 8.677e-15
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLH 70
            M  A+ R C+ C   + + DGCN++ C+CGA MCY C+K I   Y HF D  E+   GKCPL T ++ LH
Sbjct:    1 MTAALIRNCYHCGSKFVREDGCNKMICLCGAMMCYFCRKSI-SGYSHFSDKEEEIMAGKCPLWTENKKLH 69          
BLAST of EMLSAG00000000174 vs. nr
Match: gi|296411865|ref|XP_002835650.1| (hypothetical protein [Tuber melanosporum Mel28] >gi|295629436|emb|CAZ79807.1| unnamed protein product [Tuber melanosporum])

HSP 1 Score: 74.7146 bits (182), Expect = 1.366e-13
Identity = 39/82 (47.56%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQC-ICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKT 81
            M  A+ RKC+ C+ PY K  GCN+I C  C    CYIC + I+ NYDHF D     +IG CPL  N+E+ HH E  +AA+K 
Sbjct:  396 MTEALVRKCNKCSYPYIKEYGCNKIHCNRCNTLQCYICSQTIK-NYDHFNDPARGGKIGNCPLFDNTEERHHDEVETAAKKA 476          
BLAST of EMLSAG00000000174 vs. nr
Match: gi|1067077093|ref|XP_018022153.1| (PREDICTED: uncharacterized protein LOC108678287 isoform X3 [Hyalella azteca])

HSP 1 Score: 73.559 bits (179), Expect = 3.992e-13
Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEK-------PEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSL 91
            M+ A+ R+C+ C + + K DGCN++ C CGA MCY+CKK I+  YDHF D            E GKC L +NS  LH  E    A + + T D  + L
Sbjct: 1069 MSEAMVRECYKCGQRFIKEDGCNKMVCSCGAVMCYLCKKPIR-GYDHFTDQGRAAAGGLTPSENGKCALWSNSLKLHAEEVQKRAAEAKKTLDPDVQL 1165          
BLAST of EMLSAG00000000174 vs. nr
Match: gi|1067077089|ref|XP_018022151.1| (PREDICTED: uncharacterized protein LOC108678287 isoform X1 [Hyalella azteca])

HSP 1 Score: 73.559 bits (179), Expect = 4.128e-13
Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEK-------PEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSL 91
            M+ A+ R+C+ C + + K DGCN++ C CGA MCY+CKK I+  YDHF D            E GKC L +NS  LH  E    A + + T D  + L
Sbjct: 1069 MSEAMVRECYKCGQRFIKEDGCNKMVCSCGAVMCYLCKKPIR-GYDHFTDQGRAAAGGLTPSENGKCALWSNSLKLHAEEVQKRAAEAKKTLDPDVQL 1165          
BLAST of EMLSAG00000000174 vs. nr
Match: gi|1067077091|ref|XP_018022152.1| (PREDICTED: uncharacterized protein LOC108678287 isoform X2 [Hyalella azteca])

HSP 1 Score: 73.1738 bits (178), Expect = 4.250e-13
Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEK-------PEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSL 91
            M+ A+ R+C+ C + + K DGCN++ C CGA MCY+CKK I+  YDHF D            E GKC L +NS  LH  E    A + + T D  + L
Sbjct: 1069 MSEAMVRECYKCGQRFIKEDGCNKMVCSCGAVMCYLCKKPIR-GYDHFTDQGRAAAGGLTPSENGKCALWSNSLKLHAEEVQKRAAEAKKTLDPDVQL 1165          
BLAST of EMLSAG00000000174 vs. nr
Match: gi|328714828|ref|XP_003245467.1| (PREDICTED: uncharacterized protein LOC100163201 [Acyrthosiphon pisum] >gi|328714830|ref|XP_001946166.2| PREDICTED: uncharacterized protein LOC100163201 [Acyrthosiphon pisum])

HSP 1 Score: 72.0182 bits (175), Expect = 1.068e-12
Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRP 94
            M   + R C+ C + + K DGCN++ C CG QMCYIC+K +  NY HFY   ++    KCPL T+   +H     +AAR       ++L + +P
Sbjct:  440 MTEVLIRICYNCKRKFVKEDGCNKMTCSCGKQMCYICRKPVDSNYAHFYH--QEVMENKCPLYTDENIVHTTAVEAAAR----LIINELKIKKP 527          
BLAST of EMLSAG00000000174 vs. nr
Match: gi|1067103956|ref|XP_018013338.1| (PREDICTED: probable E3 ubiquitin-protein ligase ARI10 [Hyalella azteca])

HSP 1 Score: 68.1662 bits (165), Expect = 2.954e-12
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNS-EDLHHVERTSAARKTEATFDHQLSLPRPSTS 97
            M+ A+ R+C  C K + K  GCN++ C CG +MCYIC++ I  +Y+HF++       G C L TN  E LH  E    A + +   D  L L  PS S
Sbjct:   73 MSEALVRECPKCHKRFVKESGCNKMTCSCGNKMCYICRQSI-VDYNHFHN-------GTCELHTNDLEALHRSEVMRRAAEVKENIDTNLLLHDPSMS 162          
BLAST of EMLSAG00000000174 vs. nr
Match: gi|985393678|ref|XP_015364202.1| (PREDICTED: uncharacterized protein LOC107162029 [Diuraphis noxia])

HSP 1 Score: 70.8626 bits (172), Expect = 3.204e-12
Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 0
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRP 94
            M   + R C+ C + + K DGCN++ C CG QMCYIC++ +  NY HFY   ++    KCPL T+   +H     +AAR       ++L + +P
Sbjct:  433 MTEVLIRICYNCKRKFVKEDGCNKMTCSCGKQMCYICRQPVDSNYAHFYH--QQVMENKCPLYTDENVVHATAVEAAAR----LIINELKIKKP 520          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000174 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 23
Match NameE-valueIdentityDescription
-2.340e-745.00symbol:An14g00980 "Similarities to database protei... [more]
-2.340e-745.00symbol:An14g00980 species:5061 "Aspergillus niger"... [more]
-2.617e-745.00symbol:ASPNIDRAFT_210921 "Uncharacterized protein"... [more]
-7.058e-745.00symbol:AN1143.2 "RING finger protein (Zin), putati... [more]
-7.058e-745.00symbol:AN1143 species:162425 "Aspergillus nidulans... [more]
-1.153e-644.74symbol:AFUA_4G03910 "RING finger protein (Zin), pu... [more]
-1.153e-644.74symbol:Afu4g03910 species:746128 "Aspergillus fumi... [more]
-3.657e-635.29symbol:MGG_06147 "Uncharacterized protein" species... [more]
-1.232e-536.14symbol:AN2162.2 "RING finger protein, putative (AF... [more]
-1.232e-536.14symbol:AN2162 species:162425 "Aspergillus nidulans... [more]

Pages

back to top
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592923318|gb|GAXK01035097.1|6.652e-1739.77TSA: Calanus finmarchicus comp110292_c2_seq2 trans... [more]
gi|592923319|gb|GAXK01035096.1|7.661e-1739.77TSA: Calanus finmarchicus comp110292_c2_seq1 trans... [more]
gi|592942599|gb|GAXK01015954.1|1.069e-1641.49TSA: Calanus finmarchicus comp204909_c1_seq2 trans... [more]
gi|592942600|gb|GAXK01015953.1|2.336e-1541.49TSA: Calanus finmarchicus comp204909_c1_seq1 trans... [more]
gi|592774417|gb|GAXK01180151.1|1.207e-1343.42TSA: Calanus finmarchicus comp914971_c0_seq2 trans... [more]
gi|592774418|gb|GAXK01180150.1|1.474e-1343.42TSA: Calanus finmarchicus comp914971_c0_seq1 trans... [more]
gi|592812025|gb|GAXK01142543.1|8.409e-1236.05TSA: Calanus finmarchicus comp101206_c1_seq3 trans... [more]
gi|592812024|gb|GAXK01142544.1|2.126e-1140.28TSA: Calanus finmarchicus comp101206_c1_seq4 trans... [more]
gi|592812018|gb|GAXK01142550.1|6.487e-1040.26TSA: Calanus finmarchicus comp101206_c8_seq1 trans... [more]
gi|592812027|gb|GAXK01142541.1|7.556e-1040.26TSA: Calanus finmarchicus comp101206_c1_seq1 trans... [more]

Pages

back to top
BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAP000000001748.595e-72100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1025:6693... [more]
EMLSAP000000115181.552e-2857.50pep:novel supercontig:LSalAtl2s:LSalAtl2s799:20047... [more]
EMLSAP000000001895.098e-2764.71pep:novel supercontig:LSalAtl2s:LSalAtl2s1029:1454... [more]
EMLSAP000000080811.984e-1540.45pep:novel supercontig:LSalAtl2s:LSalAtl2s481:14016... [more]
EMLSAP000000115207.717e-1534.65pep:novel supercontig:LSalAtl2s:LSalAtl2s799:20186... [more]
back to top
BLAST of EMLSAG00000000174 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
gi|57015417|sp|Q9NWF9.3|RN216_HUMAN8.647e-1245.71RecName: Full=E3 ubiquitin-protein ligase RNF216; ... [more]
gi|57015377|sp|P58283.3|RN216_MOUSE9.071e-1245.71RecName: Full=E3 ubiquitin-protein ligase RNF216; ... [more]
back to top
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 7
Match NameE-valueIdentityDescription
EEB18254.12.288e-1444.29E3 ubiquitin ligase triad3, putative [Pediculus hu... [more]
EFX87807.12.983e-1438.30hypothetical protein DAPPUDRAFT_306489 [Daphnia pu... [more]
gb|EFA00238.1|7.356e-1340.45hypothetical protein TcasGA2_TC003066 [Tribolium c... [more]
gb|EFA00239.2|7.511e-1238.67hypothetical protein TcasGA2_TC003067 [Tribolium c... [more]
gb|KYB28776.1|3.899e-1030.56hypothetical protein TcasGA2_TC032478 [Tribolium c... [more]
gb|KYB28775.1|4.177e-1030.56hypothetical protein TcasGA2_TC032478 [Tribolium c... [more]
EEB18224.11.558e-948.00E3 ubiquitin ligase triad3, putative [Pediculus hu... [more]
back to top
BLAST of EMLSAG00000000174 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|1067086346|ref|XP_018027113.1|1.140e-1539.25PREDICTED: E3 ubiquitin-protein ligase RNF216-like... [more]
gi|939646387|ref|XP_014273038.1|2.635e-1545.00PREDICTED: E3 ubiquitin-protein ligase RNF216-like... [more]
gi|939688831|ref|XP_014288330.1|8.677e-1545.71PREDICTED: E3 ubiquitin-protein ligase RNF216-like... [more]
gi|296411865|ref|XP_002835650.1|1.366e-1347.56hypothetical protein [Tuber melanosporum Mel28] >g... [more]
gi|1067077093|ref|XP_018022153.1|3.992e-1340.82PREDICTED: uncharacterized protein LOC108678287 is... [more]
gi|1067077089|ref|XP_018022151.1|4.128e-1340.82PREDICTED: uncharacterized protein LOC108678287 is... [more]
gi|1067077091|ref|XP_018022152.1|4.250e-1340.82PREDICTED: uncharacterized protein LOC108678287 is... [more]
gi|328714828|ref|XP_003245467.1|1.068e-1237.23PREDICTED: uncharacterized protein LOC100163201 [A... [more]
gi|1067103956|ref|XP_018013338.1|2.954e-1238.78PREDICTED: probable E3 ubiquitin-protein ligase AR... [more]
gi|985393678|ref|XP_015364202.1|3.204e-1236.17PREDICTED: uncharacterized protein LOC107162029 [D... [more]

Pages

back to top
BLAST of EMLSAG00000000174 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1025supercontigLSalAtl2s1025:66939..67244 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s1025-processed-gene-0.4
Biotypeprotein_coding
NoteE3 ubiquitin-protein ligase RNF216
EvidenceIEA
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000174 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000174EMLSAT00000000174-696021Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1025:66939..67244-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000174-682940 ID=EMLSAG00000000174-682940|Name=EMLSAG00000000174|organism=Lepeophtheirus salmonis|type=gene|length=306bp|location=Sequence derived from alignment at LSalAtl2s1025:66939..67244- (Lepeophtheirus salmonis)
ATGGCCAATGCGGTGYTTCGCAAATGTCATGCTTGTGCAAAACCATATAC GAAAACAGATGGATGTAACCGTATCCAATGCATATGCGGTGCTCAAATGT GTTATATCTGCAAAAAGAAAATCCAGCCTAATTATGATCATTTCTATGAT TTTCCAGAAAAACCAGAAATCGGTAAATGCCCCCTTCAGACGAATTCCGA GGATCTTCATCATGTAGAACGTACATCTGCAGCAAGGAAAACAGAGGCTA CTTTTGATCATCAATTAAGTTTACCAAGACCTAGTACCTCGTATGCATCA TATTAG
back to top
Add to Basket