EMLSAG00000000275, EMLSAG00000000275-683041 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000275
Unique NameEMLSAG00000000275-683041
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000000275 vs. GO
Match: - (symbol:prp19 "ubiquitin-protein ligase E4" species:4896 "Schizosaccharomyces pombe" [GO:0005681 "spliceosomal complex" evidence=NAS] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0045292 "mRNA cis splicing, via spliceosome" evidence=TAS] [GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 PomBase:SPAC29A4.08c GO:GO:0005829 EMBL:CU329670 GO:GO:0005635 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR019775 PROSITE:PS00678 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0000151 GO:GO:0045292 GO:GO:0000974 PROSITE:PS51698 EMBL:AF254351 PIR:T38481 RefSeq:NP_594874.1 ProteinModelPortal:O14011 BioGrid:278726 DIP:DIP-34861N IntAct:O14011 MINT:MINT-4669726 STRING:4896.SPAC29A4.08c-1 EnsemblFungi:SPAC29A4.08c.1 GeneID:2542256 KEGG:spo:SPAC29A4.08c eggNOG:NOG319177 KO:K10599 OMA:TKSTKSW OrthoDB:EOG7V76GC NextBio:20803321 PRO:PR:O14011 InterPro:IPR013915 Pfam:PF08606 Uniprot:O14011)

HSP 1 Score: 135.961 bits (341), Expect = 1.435e-36
Identity = 71/141 (50.35%), Postives = 92/141 (65.25%), Query Frame = 0 
Query:    5 ICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSA 145
             CSIS E+P+ PVIS  SG VY+KRLIE+V+      DPV+    ++E+L+ +K    V+P+PPS TS+PA+L   Q+EWD+V L  F LR+ L   +QELS ALY  DAA RVI+RLTKE   AREALA         S+
Sbjct:    2 FCSISGETPKEPVISRVSGNVYEKRLIEQVIRETSK-DPVTQQECTLEDLVPVKVPDFVRPRPPSATSLPALLSLFQEEWDSVALEQFELRRNLTETKQELSTALYSLDAALRVISRLTKERDEAREALAKFSDNIGTVSS 141
[Close]
BLAST of EMLSAG00000000275 vs. GO
Match: - (symbol:PFC0365w "PRP19-like protein, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0016363 "nuclear matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR004226 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR019775 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0005874 GO:GO:0007021 GO:GO:0000151 EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV SUPFAM:SSF46988 PIR:T18432 RefSeq:XP_001351160.1 ProteinModelPortal:O77325 SMR:O77325 IntAct:O77325 MINT:MINT-1739970 STRING:5833.PFC0365w-1 PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402 KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600 ProtClustDB:CLSZ2433438 Uniprot:O77325)

HSP 1 Score: 129.028 bits (323), Expect = 4.551e-34
Identity = 64/137 (46.72%), Postives = 92/137 (67.15%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 139
            + IC+IS ++PE PVIS K+G +++KRLIEK +  N G+ PVS +  ++E+L  IK   +VKP+P + +SIP +L   Q EWD+++   F LR  +   R ELSH+LYQ+DAA RVIA+L KE    +E +  LK Q
Sbjct:    2 SIICTISGQTPEEPVIS-KTGYIFEKRLIEKHI-INYGICPVSGEVLTLEDLYPIKNEKIVKPRPITASSIPGLLSIFQTEWDSIISEMFSLRTHVNDIRNELSHSLYQYDAATRVIAKLLKEKNGYKEEIENLKKQ 136
[Close]
BLAST of EMLSAG00000000275 vs. GO
Match: - (symbol:PFC0365w "conserved protein, putative" species:5833 "Plasmodium falciparum" [GO:0016363 "nuclear matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR004226 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR019775 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0005874 GO:GO:0007021 GO:GO:0000151 EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV SUPFAM:SSF46988 PIR:T18432 RefSeq:XP_001351160.1 ProteinModelPortal:O77325 SMR:O77325 IntAct:O77325 MINT:MINT-1739970 STRING:5833.PFC0365w-1 PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402 KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600 ProtClustDB:CLSZ2433438 Uniprot:O77325)

HSP 1 Score: 129.028 bits (323), Expect = 4.551e-34
Identity = 64/137 (46.72%), Postives = 92/137 (67.15%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 139
            + IC+IS ++PE PVIS K+G +++KRLIEK +  N G+ PVS +  ++E+L  IK   +VKP+P + +SIP +L   Q EWD+++   F LR  +   R ELSH+LYQ+DAA RVIA+L KE    +E +  LK Q
Sbjct:    2 SIICTISGQTPEEPVIS-KTGYIFEKRLIEKHI-INYGICPVSGEVLTLEDLYPIKNEKIVKPRPITASSIPGLLSIFQTEWDSIISEMFSLRTHVNDIRNELSHSLYQYDAATRVIAKLLKEKNGYKEEIENLKKQ 136
[Close]
BLAST of EMLSAG00000000275 vs. GO
Match: - (symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606 "Homo sapiens" [GO:0001833 "inner cell mass cell proliferation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665 "negative regulation of neuron differentiation" evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0005811 GO:GO:0045665 GO:GO:0008610 GO:GO:0048711 GO:GO:0001833 EMBL:AP003721 GO:GO:0048026 InterPro:IPR013915 Pfam:PF08606 EMBL:AP000777 HGNC:HGNC:17896 ProteinModelPortal:F5H2I0 Ensembl:ENST00000546152 NextBio:35508429 ArrayExpress:F5H2I0 Bgee:F5H2I0 Uniprot:F5H2I0)

HSP 1 Score: 105.145 bits (261), Expect = 9.355e-28
Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 0 
Query:   88 MLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPAT 151
            ML SF LRQQLQT RQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA +    A P++
Sbjct:    1 MLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSS 64
[Close]
BLAST of EMLSAG00000000275 vs. GO
Match: - (symbol:orf19.6740 species:5476 "Candida albicans" [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA] [GO:0071006 "U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for first transesterification step" evidence=IEA] InterPro:IPR003613 InterPro:IPR015943 Pfam:PF04564 SMART:SM00504 CGD:CAL0004852 Gene3D:2.130.10.10 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AACQ01000029 EMBL:AACQ01000028 InterPro:IPR011044 SUPFAM:SSF50969 eggNOG:NOG319177 KO:K10599 OrthoDB:EOG7V76GC InterPro:IPR013915 Pfam:PF08606 RefSeq:XP_719721.1 RefSeq:XP_719838.1 ProteinModelPortal:Q5ADV1 STRING:5476.CAL0004852 GeneID:3638529 GeneID:3638592 KEGG:cal:CaO19.14032 KEGG:cal:CaO19.6740 HOGENOM:HOG000248784 Uniprot:Q5ADV1)

HSP 1 Score: 101.293 bits (251), Expect = 2.757e-24
Identity = 63/154 (40.91%), Postives = 92/154 (59.74%), Query Frame = 0 
Query:    5 ICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASP------LVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPATP 152
            ICSIS E    PV+SPKSG ++ ++ I   + +  G DP++ +P +  ELI++K +          P  PS +SIP++L + Q+EWDA++L  F L++QLQ+A+QELS ALY+ DAA  V A+  +E   AREAL  L     +   P T   P
Sbjct:    2 ICSISGEIATDPVVSPKSGAIFQRKHIVNYI-ATSGTDPITDEPLTESELISLKVNEKSTAIAQPSPPDPSNSSIPSLLSTFQNEWDAIVLEVFTLKKQLQSAKQELSIALYRQDAAVNVAAKAIRERDEAREALEKLSSSINLSDVPDTNTPP 154
[Close]
BLAST of EMLSAG00000000275 vs. C. finmarchicus
Match: gi|592776634|gb|GAXK01177934.1| (TSA: Calanus finmarchicus comp15290_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 213.001 bits (541), Expect = 2.259e-64
Identity = 101/137 (73.72%), Postives = 118/137 (86.13%), Query Frame = 0 
Query:    1 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLK 137
            M +  C++SNE P+ PV+SP SG VY++RLIEK + +  G+DP++ +P ++E+LI +K SPLVKPKPPS TSIPAILKSLQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARL KEVTAAREALATLK
Sbjct: 1235 MASLTCALSNEVPDCPVVSPVSGQVYERRLIEKYV-TEAGIDPINKEPLTIEQLIEVKCSPLVKPKPPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLNKEVTAAREALATLK 1642
[Close]
BLAST of EMLSAG00000000275 vs. C. finmarchicus
Match: gi|592796293|gb|GAXK01158275.1| (TSA: Calanus finmarchicus comp66037_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 35.4242 bits (80), Expect = 5.467e-2
Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0 
Query:    4 FICS-ISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVS 45
            ++C  IS E  + PVI+P SG+ YD+R I + LE  G  DPV+
Sbjct: 1393 YMCGKISFEILKDPVITP-SGITYDRRDITEHLERVGHFDPVT 1518
[Close]
BLAST of EMLSAG00000000275 vs. C. finmarchicus
Match: gi|592920995|gb|GAXK01037380.1| (TSA: Calanus finmarchicus comp5526821_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.6462 bits (65), Expect = 2.813e+0
Identity = 19/50 (38.00%), Postives = 25/50 (50.00%), Query Frame = 0 
Query:   85 DAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALA 134
            DAV + S  LR QLQ A QE      Q  A  + +    KEVT+ R ++ 
Sbjct:  117 DAVRIESLKLRNQLQEATQETRVGFQQVSALRKKLLTAQKEVTSQRASMG 266
[Close]
BLAST of EMLSAG00000000275 vs. C. finmarchicus
Match: gi|592850527|gb|GAXK01107017.1| (TSA: Calanus finmarchicus comp37918_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 9.151e+0
Identity = 20/53 (37.74%), Postives = 29/53 (54.72%), Query Frame = 0 
Query:    2 TTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEEL 54
            T F C+I  E  E PVI P SG + D++ IE+ + S    DP +  P + + L
Sbjct: 2924 TEFECAIMGEMMEDPVILP-SGNMCDRKNIERHILSTPN-DPFNRQPLTEDML 3076
[Close]
BLAST of EMLSAG00000000275 vs. L. salmonis peptides
Match: EMLSAP00000000275 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1041:87486:87953:1 gene:EMLSAG00000000275 transcript:EMLSAT00000000275 description:"augustus_masked-LSalAtl2s1041-processed-gene-0.9")

HSP 1 Score: 300.442 bits (768), Expect = 3.466e-105
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 
Query:    1 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPATPSAP 155
            MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPATPSAP
Sbjct:    1 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPATPSAP 155
[Close]
BLAST of EMLSAG00000000275 vs. L. salmonis peptides
Match: EMLSAP00000002716 (pep:novel supercontig:LSalAtl2s:LSalAtl2s156:84236:84442:1 gene:EMLSAG00000002716 transcript:EMLSAT00000002716 description:"snap_masked-LSalAtl2s156-processed-gene-0.2")

HSP 1 Score: 90.8929 bits (224), Expect = 3.049e-24
Identity = 45/68 (66.18%), Postives = 51/68 (75.00%), Query Frame = 0 
Query:    1 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPP 68
            M TF+ SI  +S E P I  KSGL +DK+LIEKVLESNG VDP+S DP  VEELI IK SP +KPKPP
Sbjct:    1 MMTFLSSIRKKSSEGPFIYDKSGLFFDKQLIEKVLESNGVVDPISKDPLIVEELIGIKTSPFLKPKPP 68
[Close]
BLAST of EMLSAG00000000275 vs. SwissProt
Match: gi|55976574|sp|Q99KP6.1|PRP19_MOUSE (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=Nuclear matrix protein 200; AltName: Full=PRP19/PSO4 homolog; AltName: Full=RING-type E3 ubiquitin transferase PRP19; AltName: Full=Senescence evasion factor >gi|84028243|sp|Q9JMJ4.2|PRP19_RAT RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=Neuronal differentiation-related gene protein; AltName: Full=PRP19/PSO4 homolog; AltName: Full=RING-type E3 ubiquitin transferase PRP19)

HSP 1 Score: 208.379 bits (529), Expect = 1.121e-64
Identity = 104/149 (69.80%), Postives = 119/149 (79.87%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPAT 151
            + ICSISNE PE P +SP S  VY++RLIEK +  NG  DP++  P S E+LI IK +  ++PKPPS TSIPAILK+LQDEWDAVML SF LRQQLQT RQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA +    A P++
Sbjct:    2 SLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENG-TDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSS 149
[Close]
BLAST of EMLSAG00000000275 vs. SwissProt
Match: gi|122132456|sp|Q08E38.1|PRP19_BOVIN (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=PRP19/PSO4 homolog; AltName: Full=RING-type E3 ubiquitin transferase PRP19)

HSP 1 Score: 208.379 bits (529), Expect = 1.195e-64
Identity = 104/149 (69.80%), Postives = 119/149 (79.87%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPAT 151
            + ICSISNE PE P +SP S  VY++RLIEK +  NG  DP++  P S E+LI IK +  ++PKPPS TSIPAILK+LQDEWDAVML SF LRQQLQT RQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA +    A P++
Sbjct:    2 SLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENG-TDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSS 149
[Close]
BLAST of EMLSAG00000000275 vs. SwissProt
Match: gi|55976619|sp|Q9UMS4.1|PRP19_HUMAN (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=Nuclear matrix protein 200; AltName: Full=PRP19/PSO4 homolog; Short=hPso4; AltName: Full=RING-type E3 ubiquitin transferase PRP19; AltName: Full=Senescence evasion factor)

HSP 1 Score: 207.994 bits (528), Expect = 1.274e-64
Identity = 104/149 (69.80%), Postives = 119/149 (79.87%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPAT 151
            + ICSISNE PE P +SP S  VY++RLIEK +  NG  DP++  P S E+LI IK +  ++PKPPS TSIPAILK+LQDEWDAVML SF LRQQLQT RQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA +    A P++
Sbjct:    2 SLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENG-TDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSS 149
[Close]
BLAST of EMLSAG00000000275 vs. SwissProt
Match: gi|82082891|sp|Q5ZMA2.1|PRP19_CHICK (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=PRP19/PSO4 homolog; AltName: Full=RING-type E3 ubiquitin transferase PRP19)

HSP 1 Score: 206.838 bits (525), Expect = 3.517e-64
Identity = 104/148 (70.27%), Postives = 118/148 (79.73%), Query Frame = 0 
Query:    4 FICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPAT 151
             ICSISNE PE P +SP S  VY++RLIEK +  NG  DPV+  P S E+LI IK +  ++P+PPS TSIPAILK+LQDEWDAVML SF LRQQLQT RQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA +    A P++
Sbjct:    3 LICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENG-TDPVNNQPLSEEQLIDIKVAHPIRPRPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSS 149
[Close]
BLAST of EMLSAG00000000275 vs. SwissProt
Match: gi|55977847|sp|Q10051.2|PRP19_CAEEL (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=PRP19/PSO4 homolog; AltName: Full=RING-type E3 ubiquitin transferase PRP19)

HSP 1 Score: 174.481 bits (441), Expect = 8.819e-52
Identity = 83/140 (59.29%), Postives = 106/140 (75.71%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVK-PKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAA 141
            +F+C IS E  E PV+S  SG ++D+RLI K +  NG  DP+S    S ++L+++K+      P+  SGTSIP++LK LQDEWD VML SF LRQQLQ ARQELSH+LYQHDAACRVI+RL+KE+TAAREAL+TLKP  +
Sbjct:    2 SFVCGISGELTEDPVVSQVSGHIFDRRLIVKFIAENG-TDPISHGELSEDQLVSLKSGGTGSAPRNVSGTSIPSLLKMLQDEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVISRLSKELTAAREALSTLKPHTS 140
[Close]
BLAST of EMLSAG00000000275 vs. SwissProt
Match: gi|75333134|sp|Q9AV81.1|PRP19_ORYSJ (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=Plant U-box protein 72; Short=OsPUB72; AltName: Full=RING-type E3 ubiquitin transferase PRP19; AltName: Full=U-box domain-containing protein 72)

HSP 1 Score: 157.147 bits (396), Expect = 6.244e-45
Identity = 75/146 (51.37%), Postives = 102/146 (69.86%), Query Frame = 0 
Query:    4 FICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149
             IC+IS E P+ PV+S KSGL++++RL+E+ +E +G   PV+ +  ++++++A+K + +VKP+     SIP +L   Q+EWDA+ML SF L QQL TARQELSHALYQHDAACRVIARL KE   AR  LA  + Q     A A P
Sbjct:    1 MICAISGEVPDEPVVSKKSGLLFERRLVERYIEDHGKC-PVTKEELTMDDIVAVKTNKVVKPRQLQAASIPGLLGMFQNEWDAIMLSSFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLAQAERQIPASMAGAAP 145
[Close]
BLAST of EMLSAG00000000275 vs. SwissProt
Match: gi|75332078|sp|Q94BR4.1|PR19A_ARATH (RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full=U-box domain-containing protein 59)

HSP 1 Score: 155.992 bits (393), Expect = 1.288e-44
Identity = 78/149 (52.35%), Postives = 106/149 (71.14%), Query Frame = 0 
Query:    6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPATPSA 154
            C+IS E PE PV+S KSGL+Y+KRLI+  + S+ G  PV+ +P ++++++ IK   +VKPKP    SIP +L + Q EWD++ML +F L QQL TARQELSHALYQHDAACRVIARL KE   +R+ LA  + Q  +P+AP    + +A
Sbjct:    3 CAISGEVPEEPVVSKKSGLLYEKRLIQTHI-SDYGKCPVTGEPHTLDDIVPIKTGKIVKPKPLHTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDESRQLLAEAERQ--LPAAPEVATSNAA 148
[Close]
BLAST of EMLSAG00000000275 vs. SwissProt
Match: gi|288558844|sp|O22785.3|PR19B_ARATH (RecName: Full=Pre-mRNA-processing factor 19 homolog 2; AltName: Full=MOS4-associated complex protein 3B; Short=MAC protein 3B; AltName: Full=Plant U-box protein 60; AltName: Full=RING-type E3 ubiquitin transferase PRP19 2; AltName: Full=U-box domain-containing protein 60)

HSP 1 Score: 151.369 bits (381), Expect = 7.874e-43
Identity = 73/141 (51.77%), Postives = 102/141 (72.34%), Query Frame = 0 
Query:    6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAP 146
            C+IS E P  PV+S KSGL++++RLIE+ + S+ G  PV+ +P ++++++ IK   ++KPK     SIP +L + Q+EWD +ML +F L QQL TARQELSHALYQHD+ACRVIARL KE   AR+ LA ++    IP+AP
Sbjct:    3 CAISGEVPVEPVVSTKSGLLFERRLIERHI-SDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDEARQLLAEVERH--IPAAP 140
[Close]
BLAST of EMLSAG00000000275 vs. SwissProt
Match: gi|75009952|sp|Q7KWK5.1|PRP19_DICDI (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=PRP19/PSO4 homolog; AltName: Full=RING-type E3 ubiquitin transferase PRP19)

HSP 1 Score: 148.673 bits (374), Expect = 6.014e-42
Identity = 71/133 (53.38%), Postives = 100/133 (75.19%), Query Frame = 0 
Query:    5 ICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLK 137
            IC+IS  + E PVIS K+G VY+KRLIEK +++NG  +P + +P  + +LI +K    VKP+P + TSIP++L+  Q+EWD++ML +F L+QQ +T RQEL+H++YQ+DAACRVIARL KE  AAR ALA  +
Sbjct:    2 ICAISGSTTEEPVISTKTGNVYEKRLIEKYIDTNGK-EPTTGEPLGLSDLITVKIGKTVKPRPTTATSIPSMLQLFQNEWDSLMLETFTLKQQHETVRQELAHSMYQYDAACRVIARLVKERDAARSALANAR 133
[Close]
BLAST of EMLSAG00000000275 vs. SwissProt
Match: gi|3219948|sp|O14011.1|PRP19_SCHPO (RecName: Full=Pre-mRNA-processing factor 19; AltName: Full=Complexed with cdc5 protein 8; AltName: Full=RING-type E3 ubiquitin transferase PRP19)

HSP 1 Score: 135.961 bits (341), Expect = 2.607e-37
Identity = 71/141 (50.35%), Postives = 92/141 (65.25%), Query Frame = 0 
Query:    5 ICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSA 145
             CSIS E+P+ PVIS  SG VY+KRLIE+V+      DPV+    ++E+L+ +K    V+P+PPS TS+PA+L   Q+EWD+V L  F LR+ L   +QELS ALY  DAA RVI+RLTKE   AREALA         S+
Sbjct:    2 FCSISGETPKEPVISRVSGNVYEKRLIEQVIRETSK-DPVTQQECTLEDLVPVKVPDFVRPRPPSATSLPALLSLFQEEWDSVALEQFELRRNLTETKQELSTALYSLDAALRVISRLTKERDEAREALAKFSDNIGTVSS 141
[Close]
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: gb|KFM80282.1| (Pre-mRNA-processing factor 19, partial [Stegodyphus mimosarum])

HSP 1 Score: 206.838 bits (525), Expect = 8.680e-69
Identity = 103/141 (73.05%), Postives = 116/141 (82.27%), Query Frame = 0 
Query:    6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAP 146
            C++SNE PE PV+SP SG +++KRLI K ++ NG  DP++    S E LI IK    VKP+PPS TSIPAILK+LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I +AP
Sbjct:    5 CALSNEVPEQPVVSPASGSIFEKRLIVKYIQENG-TDPINGKELSEESLIEIKTPSAVKPRPPSATSIPAILKTLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIAAAP 144
[Close]
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: XP_392284.2 (PREDICTED: pre-mRNA-processing factor 19 [Apis mellifera])

HSP 1 Score: 213.772 bits (543), Expect = 4.326e-67
Identity = 106/144 (73.61%), Postives = 118/144 (81.94%), Query Frame = 0 
Query:    6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149
            C+ISNE PE PV+SP SG +++KRLIEK L  NG VDP++    + ++LI IK + +VKPKPPS TSIPAILK LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I  A   P
Sbjct:    5 CAISNEVPEHPVVSPVSGSIFEKRLIEKYLAENG-VDPITGKELTADQLIDIKTTAIVKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVQATTIP 147
[Close]
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: EFX80977.1 (hypothetical protein DAPPUDRAFT_303758 [Daphnia pulex])

HSP 1 Score: 204.527 bits (519), Expect = 1.570e-63
Identity = 102/145 (70.34%), Postives = 119/145 (82.07%), Query Frame = 0 
Query:    6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATPA 150
            CS+SNE PE PV+SP SG V+++RLIEK +  NG VDP++    +V++LI IK  P+VKPK PS TSIPA+LKSLQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARL KEV+ AREALATLKPQ    +A +TP+
Sbjct:    5 CSLSNEVPEHPVVSPVSGSVFERRLIEKYIADNG-VDPINGKEITVDQLIEIKTPPIVKPKVPSATSIPAVLKSLQDEWDAVMLNSFTLRQQLQTARQELSHALYQHDAACRVIARLHKEVSTAREALATLKPQTGY-AAVSTPS 147
[Close]
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: EAA04221.5 (AGAP007217-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 203.756 bits (517), Expect = 2.649e-63
Identity = 98/147 (66.67%), Postives = 116/147 (78.91%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149
            + +CSISNE PE P ISPKSG ++++RLIEK +  N   DP++  P + EELI +K  P+V+PKPPS TSIPA LK++QDEWDA+ML SF  RQQLQTARQELSHALYQHDAACRVIARL KEV AAREALATLKPQ  + +  A P
Sbjct:    2 SLVCSISNEVPEHPCISPKSGAIFERRLIEKYIVENE-CDPINGQPLTAEELIDVKTPPIVRPKPPSATSIPATLKTMQDEWDALMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLNKEVAAAREALATLKPQTGMSAIQAAP 147
[Close]
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: gb|KYB25334.1| (hypothetical protein TcasGA2_TC034425 [Tribolium castaneum])

HSP 1 Score: 208.379 bits (529), Expect = 3.599e-62
Identity = 101/143 (70.63%), Postives = 117/143 (81.82%), Query Frame = 0 
Query:    4 FICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAP 146
              C++SNE PE PV+SP SG +++KR+IEK ++ +G  DP+S D  +V++LI IK  P+VKPKPPS TSIPA LK LQDEWDAVML SF  RQQLQTARQELSHALYQHDAACRVIARL KEVTAAREALATLKPQA I + P
Sbjct: 1242 LFCALSNEVPEHPVVSPTSGAIFEKRIIEKYIQEHGK-DPISGDELTVDKLIEIKTPPIVKPKPPSATSIPATLKLLQDEWDAVMLYSFTQRQQLQTARQELSHALYQHDAACRVIARLNKEVTAAREALATLKPQAGIITVP 1383
[Close]
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: AAF57684.1 (Pre-RNA processing factor 19 [Drosophila melanogaster])

HSP 1 Score: 181.8 bits (460), Expect = 9.518e-55
Identity = 98/143 (68.53%), Postives = 113/143 (79.02%), Query Frame = 0 
Query:    4 FICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAP 146
             +C+++NE PE PV+SP SG V++KR+IEK L  NG  DP+S      EELI IK   +VKPKPPS TSIPA LK++QDEWDA+M+ SF  RQQLQT RQELSHALYQHDAACRVIARL KEV AAREALATLKPQA I +AP
Sbjct:    3 LVCALTNEVPETPVVSPHSGAVFEKRVIEKYLLENG-CDPISGKELKPEELIEIKTPAVVKPKPPSATSIPATLKTMQDEWDALMIHSFTQRQQLQTTRQELSHALYQHDAACRVIARLNKEVAAAREALATLKPQAGIANAP 144
[Close]
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: gb|KPM10618.1| (pre-mRNA-processing factor 19-like protein [Sarcoptes scabiei])

HSP 1 Score: 179.874 bits (455), Expect = 3.715e-54
Identity = 85/138 (61.59%), Postives = 109/138 (78.99%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA 140
            + +C +S + PE PV+SP SG +++KRLI K LE    VDP+     + +ELI IK   ++KPKPPS TSIPA+LK+LQDEWDA+ML SF LRQQLQ  RQEL+++LYQHDAACRVIARL+KE+TAAR+ALA LKP++
Sbjct:    2 SLVCVLSEQVPEEPVVSPYSGAIFEKRLILKYLEEKK-VDPICGREMTADELIEIKVPSIIKPKPPSATSIPALLKTLQDEWDAIMLHSFTLRQQLQATRQELTYSLYQHDAACRVIARLSKELTAARDALAKLKPKS 138
[Close]
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Match: EEB09812.1 (pre-mRNA-splicing factor, putative [Pediculus humanus corporis])

HSP 1 Score: 141.739 bits (356), Expect = 6.608e-40
Identity = 68/78 (87.18%), Postives = 71/78 (91.03%), Query Frame = 0 
Query:   69 SGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAP 146
            S TSIPAILK+LQDEWDAVML SF  RQQLQTARQELSHALYQHDAACRVIARL+KEVTAAREALATLKPQA + S P
Sbjct:   17 SATSIPAILKTLQDEWDAVMLHSFTQRQQLQTARQELSHALYQHDAACRVIARLSKEVTAAREALATLKPQAGVTSNP 94
[Close]
BLAST of EMLSAG00000000275 vs. nr
Match: gi|225718334|gb|ACO15013.1| (Pre-mRNA-processing factor 19 [Caligus clemensi])

HSP 1 Score: 255.758 bits (652), Expect = 1.348e-80
Identity = 124/144 (86.11%), Postives = 132/144 (91.67%), Query Frame = 0 
Query:    1 MTTFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPS 144
            MTTFICSISNESPE PV+SP SGLV++KRLIEK LESNG +DP+S DP SV +LI I++SPLVKPKPPSGTSIP ILKSLQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAI S
Sbjct:    1 MTTFICSISNESPENPVLSPVSGLVHEKRLIEKALESNGSLDPISKDPLSVSDLIPIRSSPLVKPKPPSGTSIPGILKSLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIAS 144
[Close]
BLAST of EMLSAG00000000275 vs. nr
Match: gi|826410767|ref|XP_012541202.1| (PREDICTED: pre-mRNA-processing factor 19-like, partial [Monomorium pharaonis])

HSP 1 Score: 217.238 bits (552), Expect = 4.047e-70
Identity = 108/144 (75.00%), Postives = 122/144 (84.72%), Query Frame = 0 
Query:    6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149
            C+ISNE PE PVISP SG ++++RLIEK +  NG VDP++    ++E+LI IKA+P+VKPKPPS TSIPAILK +QDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I  A A P
Sbjct:    5 CAISNEVPEHPVISPVSGSIFERRLIEKYVTENG-VDPINGKELAIEQLIDIKATPIVKPKPPSATSIPAILKIMQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVQATAIP 147
[Close]
BLAST of EMLSAG00000000275 vs. nr
Match: gi|358342425|dbj|GAA35974.2| (pre-mRNA-processing factor 19 [Clonorchis sinensis])

HSP 1 Score: 228.024 bits (580), Expect = 5.807e-69
Identity = 110/140 (78.57%), Postives = 121/140 (86.43%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAI 142
            + ICS+SNE PE PVISPKSG V+++R+IEK L+ NG  DP+   P +VEELI IK SP V+PKPPS TSIPAILK+LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I
Sbjct:   73 SLICSLSNEVPEHPVISPKSGHVFERRVIEKYLQENG-TDPIDQQPLTVEELIEIKTSPFVRPKPPSATSIPAILKTLQDEWDAVMLQSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGI 211
[Close]
BLAST of EMLSAG00000000275 vs. nr
Match: gi|1058069940|gb|JAS38631.1| (hypothetical protein g.4969, partial [Cuerna arida])

HSP 1 Score: 213.772 bits (543), Expect = 8.514e-69
Identity = 106/145 (73.10%), Postives = 120/145 (82.76%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPA 147
            +  C+ISNE PE PV+SP SG +++KRLIEK +  NG +DP+S    +VE+LI IK +P+VKPKPPS TSIPAILK+LQDEWDAVML SF  RQQLQTARQELSHALYQHDAACRVI RLTKEVTAAREALATLKPQA I   PA
Sbjct:    2 SLTCAISNEVPEHPVVSPVSGAIFEKRLIEKYIIENG-IDPISGKELAVEQLIEIKTTPVVKPKPPSATSIPAILKTLQDEWDAVMLHSFTQRQQLQTARQELSHALYQHDAACRVIGRLTKEVTAAREALATLKPQAGIAQPPA 145
[Close]
BLAST of EMLSAG00000000275 vs. nr
Match: gi|780703264|ref|XP_011702580.1| (PREDICTED: pre-mRNA-processing factor 19-like, partial [Wasmannia auropunctata])

HSP 1 Score: 211.46 bits (537), Expect = 6.462e-68
Identity = 106/142 (74.65%), Postives = 119/142 (83.80%), Query Frame = 0 
Query:    8 ISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149
            ISNE PE PVISP SG ++++RLIEK +  NG VDP++    S+++LI IKA+P+VKPKPPS TSIPAILK +QDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I  A   P
Sbjct:    2 ISNEVPEHPVISPVSGSIFERRLIEKYVTENG-VDPINGKELSIDQLIDIKATPIVKPKPPSATSIPAILKIMQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVQATTIP 142
[Close]
BLAST of EMLSAG00000000275 vs. nr
Match: gi|56756248|gb|AAW26299.1| (SJCHGC06229 protein [Schistosoma japonicum])

HSP 1 Score: 223.402 bits (568), Expect = 7.849e-68
Identity = 107/140 (76.43%), Postives = 120/140 (85.71%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAI 142
            + +CS+SNE PE PV+SP+SG ++++RLIEK L  NG  DP+   P +VEELI IKAS  V+PKPPS TSIPAILK+LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I
Sbjct:    2 SLLCSLSNEVPEHPVVSPRSGHIFERRLIEKYLSENG-TDPIDQQPLAVEELIDIKASAFVRPKPPSATSIPAILKTLQDEWDAVMLQSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGI 140
[Close]
BLAST of EMLSAG00000000275 vs. nr
Match: gi|684393898|ref|XP_009170736.1| (hypothetical protein T265_07048 [Opisthorchis viverrini] >gi|663049489|gb|KER25533.1| hypothetical protein T265_07048 [Opisthorchis viverrini])

HSP 1 Score: 223.787 bits (569), Expect = 1.118e-67
Identity = 108/137 (78.83%), Postives = 119/137 (86.86%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 139
            + ICS+SNE PE PVISPKSG V+++R+IEK L+ NG  DP+   P +VEELI IK SP V+PKPPS TSIPAILK+LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ
Sbjct:   49 SLICSLSNEVPEHPVISPKSGHVFERRVIEKYLQENG-TDPIDQQPLTVEELIEIKTSPFVRPKPPSATSIPAILKTLQDEWDAVMLQSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 184
[Close]
BLAST of EMLSAG00000000275 vs. nr
Match: gi|815798095|ref|XP_012219721.1| (PREDICTED: pre-mRNA-processing factor 19 [Linepithema humile])

HSP 1 Score: 221.09 bits (562), Expect = 2.594e-67
Identity = 109/144 (75.69%), Postives = 122/144 (84.72%), Query Frame = 0 
Query:    6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149
            C+ISNE PE PV+SP SG +++KRLIEK +  NG VDP++    ++E+LI IKA+P+VKPKPPS TSIPAILK LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I  A A P
Sbjct:    5 CAISNEVPEHPVVSPVSGSIFEKRLIEKYVSENG-VDPINGKELTIEQLIDIKATPIVKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVQATAIP 147
[Close]
BLAST of EMLSAG00000000275 vs. nr
Match: gi|817195405|ref|XP_012273236.1| (PREDICTED: pre-mRNA-processing factor 19 isoform X1 [Orussus abietinus])

HSP 1 Score: 220.32 bits (560), Expect = 6.661e-67
Identity = 110/144 (76.39%), Postives = 120/144 (83.33%), Query Frame = 0 
Query:    6 CSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAPATP 149
            C+ISNE PE PVISP SG +++KRLIEK L  NG VDP++    +VE+LI +K +PLVKPKPPS TSIPAILK LQDEWDAVML SF LRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQA I  A   P
Sbjct:    5 CAISNEVPEHPVISPVSGSIFEKRLIEKFLAENG-VDPINGKELTVEQLIDVKTTPLVKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVQAVVIP 147
[Close]
BLAST of EMLSAG00000000275 vs. nr
Match: gi|1058243280|gb|JAT25156.1| (hypothetical protein g.29429, partial [Graphocephala atropunctata])

HSP 1 Score: 213.772 bits (543), Expect = 1.417e-66
Identity = 104/144 (72.22%), Postives = 118/144 (81.94%), Query Frame = 0 
Query:    3 TFICSISNESPEVPVISPKSGLVYDKRLIEKVLESNGGVDPVSXDPXSVEELIAIKASPLVKPKPPSGTSIPAILKSLQDEWDAVMLXSFXLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAIPSAP 146
            +  C+ISNE PE PV+SP SG +++KRLIEK +  NG +DP+S    ++E LI IK +P+VKPKPPS TSIPAILK+LQDEWDAVML SF  RQQLQTARQELSHALYQHDAACRVI RLTKEVTAAREALATLKPQA I   P
Sbjct:    2 SLTCAISNEVPEHPVVSPASGAIFEKRLIEKYIIENG-IDPISGKELAIEHLIEIKTTPVVKPKPPSATSIPAILKTLQDEWDAVMLHSFTQRQQLQTARQELSHALYQHDAACRVIGRLTKEVTAAREALATLKPQAGIAQPP 144
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000275 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-1.435e-3650.35symbol:prp19 "ubiquitin-protein ligase E4" species... [more]
-4.551e-3446.72symbol:PFC0365w "PRP19-like protein, putative" spe... [more]
-4.551e-3446.72symbol:PFC0365w "conserved protein, putative" spec... [more]
-9.355e-2881.25symbol:PRPF19 "Pre-mRNA-processing factor 19" spec... [more]
-2.757e-2440.91symbol:orf19.6740 species:5476 "Candida albicans" ... [more]

Pages

back to top
BLAST of EMLSAG00000000275 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 4
Match NameE-valueIdentityDescription
gi|592776634|gb|GAXK01177934.1|2.259e-6473.72TSA: Calanus finmarchicus comp15290_c3_seq1 transc... [more]
gi|592796293|gb|GAXK01158275.1|5.467e-246.51TSA: Calanus finmarchicus comp66037_c0_seq1 transc... [more]
gi|592920995|gb|GAXK01037380.1|2.813e+038.00TSA: Calanus finmarchicus comp5526821_c0_seq1 tran... [more]
gi|592850527|gb|GAXK01107017.1|9.151e+037.74TSA: Calanus finmarchicus comp37918_c2_seq1 transc... [more]
back to top
BLAST of EMLSAG00000000275 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000002753.466e-105100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1041:8748... [more]
EMLSAP000000027163.049e-2466.18pep:novel supercontig:LSalAtl2s:LSalAtl2s156:84236... [more]
back to top
BLAST of EMLSAG00000000275 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
gi|55976574|sp|Q99KP6.1|PRP19_MOUSE1.121e-6469.80RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]
gi|122132456|sp|Q08E38.1|PRP19_BOVIN1.195e-6469.80RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]
gi|55976619|sp|Q9UMS4.1|PRP19_HUMAN1.274e-6469.80RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]
gi|82082891|sp|Q5ZMA2.1|PRP19_CHICK3.517e-6470.27RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]
gi|55977847|sp|Q10051.2|PRP19_CAEEL8.819e-5259.29RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]
gi|75333134|sp|Q9AV81.1|PRP19_ORYSJ6.244e-4551.37RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]
gi|75332078|sp|Q94BR4.1|PR19A_ARATH1.288e-4452.35RecName: Full=Pre-mRNA-processing factor 19 homolo... [more]
gi|288558844|sp|O22785.3|PR19B_ARATH7.874e-4351.77RecName: Full=Pre-mRNA-processing factor 19 homolo... [more]
gi|75009952|sp|Q7KWK5.1|PRP19_DICDI6.014e-4253.38RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]
gi|3219948|sp|O14011.1|PRP19_SCHPO2.607e-3750.35RecName: Full=Pre-mRNA-processing factor 19; AltNa... [more]

Pages

back to top
BLAST of EMLSAG00000000275 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 8
Match NameE-valueIdentityDescription
gb|KFM80282.1|8.680e-6973.05Pre-mRNA-processing factor 19, partial [Stegodyphu... [more]
XP_392284.24.326e-6773.61PREDICTED: pre-mRNA-processing factor 19 [Apis mel... [more]
EFX80977.11.570e-6370.34hypothetical protein DAPPUDRAFT_303758 [Daphnia pu... [more]
EAA04221.52.649e-6366.67AGAP007217-PA [Anopheles gambiae str. PEST][more]
gb|KYB25334.1|3.599e-6270.63hypothetical protein TcasGA2_TC034425 [Tribolium c... [more]
AAF57684.19.518e-5568.53Pre-RNA processing factor 19 [Drosophila melanogas... [more]
gb|KPM10618.1|3.715e-5461.59pre-mRNA-processing factor 19-like protein [Sarcop... [more]
EEB09812.16.608e-4087.18pre-mRNA-splicing factor, putative [Pediculus huma... [more]
back to top
BLAST of EMLSAG00000000275 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|225718334|gb|ACO15013.1|1.348e-8086.11Pre-mRNA-processing factor 19 [Caligus clemensi][more]
gi|826410767|ref|XP_012541202.1|4.047e-7075.00PREDICTED: pre-mRNA-processing factor 19-like, par... [more]
gi|358342425|dbj|GAA35974.2|5.807e-6978.57pre-mRNA-processing factor 19 [Clonorchis sinensis... [more]
gi|1058069940|gb|JAS38631.1|8.514e-6973.10hypothetical protein g.4969, partial [Cuerna arida... [more]
gi|780703264|ref|XP_011702580.1|6.462e-6874.65PREDICTED: pre-mRNA-processing factor 19-like, par... [more]
gi|56756248|gb|AAW26299.1|7.849e-6876.43SJCHGC06229 protein [Schistosoma japonicum][more]
gi|684393898|ref|XP_009170736.1|1.118e-6778.83hypothetical protein T265_07048 [Opisthorchis vive... [more]
gi|815798095|ref|XP_012219721.1|2.594e-6775.69PREDICTED: pre-mRNA-processing factor 19 [Linepith... [more]
gi|817195405|ref|XP_012273236.1|6.661e-6776.39PREDICTED: pre-mRNA-processing factor 19 isoform X... [more]
gi|1058243280|gb|JAT25156.1|1.417e-6672.22hypothetical protein g.29429, partial [Graphocepha... [more]

Pages

back to top
BLAST of EMLSAG00000000275 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1041supercontigLSalAtl2s1041:87486..87953 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s1041-processed-gene-0.9
Biotypeprotein_coding
EvidenceIEA
NotePre-mRNA-processing factor 19
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000275 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000275EMLSAT00000000275-696122Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1041:87486..87953+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000275-683041 ID=EMLSAG00000000275-683041|Name=EMLSAG00000000275|organism=Lepeophtheirus salmonis|type=gene|length=468bp|location=Sequence derived from alignment at LSalAtl2s1041:87486..87953+ (Lepeophtheirus salmonis)
ATGACGACATTCATTTGTTCCATAAGTAATGAGAGCCCTGAGGTGCCCGT
CATCAGCCCCAAGTCTGGACTGGTCTACGACAAGCGGCTGATTGAGAAGG
TGTTGGAAAGCAATGGTGGAGTGGATCCCGTGTCCARGGATCCTCKGAGT
GTGGAGGAGCTGATTGCCATTAAAGCGAGTCCGCTTGTGAAGCCCAAACC
TCCCTCGGGCACGTCCATTCCCGCAATTTTGAAGTCTCTGCAGGACGAGT
GGGACGCCGTGATGCTGCNCTCCTTCMCCCTCCGGCAGCAGCTTCAAACG
GCGCGCCAAGAGCTGAGTCATGCCCTCTATCAGCACGATGCGGCTTGTCG
GGTCATCGCTCGCCTCACGAAGGAAGTCACTGCGGCTAGAGAAGCTTTGG
CCACACTGAAGCCTCAAGCTGCAATCCCCTCCGCTCCTGCTACACCTGCC
ACMCCCTCTGCCCCCTGA
back to top
Add to Basket