EMLSAG00000000311, EMLSAG00000000311-683077 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000311
Unique NameEMLSAG00000000311-683077
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000000311 vs. C. finmarchicus
Match: gi|592953585|gb|GAXK01004968.1| (TSA: Calanus finmarchicus comp348412_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 75.0998 bits (183), Expect = 1.197e-16
Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 0
Query:   58 CNCQXISLTFRDSRGTIHGNCKSMIN-GAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPIC 127
            C CQ  SLTFRD  G +HGNCKS+ + GAQWCY+    +S C DL+ S +F    WS  ACATP  +S  C
Sbjct:  149 CGCQCSSLTFRDEYGKVHGNCKSVDDKGAQWCYISSTHYSSCEDLQLSAKFPNNPWSYTACATPDLSSYEC 361          
BLAST of EMLSAG00000000311 vs. C. finmarchicus
Match: gi|592932379|gb|GAXK01026174.1| (TSA: Calanus finmarchicus comp18158_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 72.7886 bits (177), Expect = 2.188e-15
Identity = 38/71 (53.52%), Postives = 44/71 (61.97%), Query Frame = 0
Query:   58 CNCQXISLTFRDSRGTIHGNCKSM-INGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPIC 127
            C CQ  SLTFRD+ GT+ GNCK++   GAQWCYV     S C DL  S+RF    WS  ACATP   S +C
Sbjct:  133 CGCQCSSLTFRDTSGTVQGNCKTVDGTGAQWCYVDSSSSS-CQDLVPSERFPHNPWSYEACATPDLGSALC 342          
BLAST of EMLSAG00000000311 vs. C. finmarchicus
Match: gi|592932381|gb|GAXK01026172.1| (TSA: Calanus finmarchicus comp18158_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 70.4774 bits (171), Expect = 3.955e-14
Identity = 40/71 (56.34%), Postives = 42/71 (59.15%), Query Frame = 0
Query:   58 CNCQXISLTFRDSRGTIHGNCKSM-INGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPIC 127
            C CQ  SLTFRDS   I GNCK++   GAQWCYV     S C DL  SQRF    WS  ACATP   S IC
Sbjct:  130 CGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVDSSHSS-CQDLVPSQRFPHNPWSYEACATPALGSHIC 339          
BLAST of EMLSAG00000000311 vs. C. finmarchicus
Match: gi|592932380|gb|GAXK01026173.1| (TSA: Calanus finmarchicus comp18158_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 67.781 bits (164), Expect = 1.602e-13
Identity = 35/71 (49.30%), Postives = 43/71 (60.56%), Query Frame = 0
Query:   58 CNCQXISLTFRDSRGTIHGNCKSM-INGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPIC 127
            C CQ  +L+FRD+ G + GNCK++   GAQWCYV     S C DL  S+RF    WS  ACATP   S +C
Sbjct:  196 CGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVDSSS-SSCQDLVPSERFPHNPWSYEACATPDLGSALC 405          
BLAST of EMLSAG00000000311 vs. C. finmarchicus
Match: gi|592932382|gb|GAXK01026171.1| (TSA: Calanus finmarchicus comp18158_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 67.781 bits (164), Expect = 3.923e-13
Identity = 36/71 (50.70%), Postives = 43/71 (60.56%), Query Frame = 0
Query:   58 CNCQXISLTFRDSRGTIHGNCKSM-INGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPIC 127
            C CQ  +L+FRD+ G + GNCK++   GAQWCYV     S C DL  S+RF    WS  ACATP   S IC
Sbjct:  196 CGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVDSSSSS-CQDLVPSERFPHNPWSYEACATPALGSHIC 405          
BLAST of EMLSAG00000000311 vs. C. finmarchicus
Match: gi|592932378|gb|GAXK01026175.1| (TSA: Calanus finmarchicus comp18158_c1_seq5 transcribed RNA sequence)

HSP 1 Score: 64.6994 bits (156), Expect = 5.171e-13
Identity = 36/63 (57.14%), Postives = 38/63 (60.32%), Query Frame = 0
Query:   58 CNCQXISLTFRDSRGTIHGNCKSM-INGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACAT 119
            C CQ  SLTFRDS   I GNCK++   GAQWCYV     S C DL  SQRF    WS  ACAT
Sbjct:  130 CGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVDSSH-SSCQDLVPSQRFPHNPWSYEACAT 315          
BLAST of EMLSAG00000000311 vs. C. finmarchicus
Match: gi|592932365|gb|GAXK01026188.1| (TSA: Calanus finmarchicus comp18158_c2_seq13 transcribed RNA sequence)

HSP 1 Score: 65.0846 bits (157), Expect = 6.322e-13
Identity = 36/65 (55.38%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   58 CNCQXISLTFRDSRGTIHGNCKSMIN-GAQWCYVKYDRFSPCPDLR-ASQRFRGRYWSNHACATP 120
            C CQ  +LTFRD  G  HGNCKS  + GA WCYV   + S C DL   S RF G+ WS  ACATP
Sbjct:    7 CGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATP 201          
BLAST of EMLSAG00000000311 vs. C. finmarchicus
Match: gi|592932366|gb|GAXK01026187.1| (TSA: Calanus finmarchicus comp18158_c2_seq12 transcribed RNA sequence)

HSP 1 Score: 65.0846 bits (157), Expect = 7.592e-13
Identity = 36/65 (55.38%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   58 CNCQXISLTFRDSRGTIHGNCKSMIN-GAQWCYVKYDRFSPCPDLR-ASQRFRGRYWSNHACATP 120
            C CQ  +LTFRD  G  HGNCKS  + GA WCYV   + S C DL   S RF G+ WS  ACATP
Sbjct:    7 CGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATP 201          
BLAST of EMLSAG00000000311 vs. C. finmarchicus
Match: gi|592906544|gb|GAXK01051831.1| (TSA: Calanus finmarchicus comp28981_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 64.3142 bits (155), Expect = 2.261e-12
Identity = 37/69 (53.62%), Postives = 41/69 (59.42%), Query Frame = 0
Query:   59 NCQXISLTFRDSRGTIHGNCKSMIN-GAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPI 126
             CQ  SLTF DS G I GNCKS+ + GAQWCYV +   S C DL  S RF    WS  ACATP    P+
Sbjct:  365 GCQCSSLTFIDSSGHIQGNCKSVDHTGAQWCYVDHLHSS-CQDLVHSARFPNNPWSYEACATPAVYQPV 568          
BLAST of EMLSAG00000000311 vs. C. finmarchicus
Match: gi|592932371|gb|GAXK01026182.1| (TSA: Calanus finmarchicus comp18158_c2_seq7 transcribed RNA sequence)

HSP 1 Score: 65.4698 bits (158), Expect = 2.544e-12
Identity = 36/66 (54.55%), Postives = 40/66 (60.61%), Query Frame = 0
Query:   58 CNCQXISLTFRDSRGTIHGNCKSMIN-GAQWCYVKYDRFSPCPDLR-ASQRFRGRYWSNHACATPP 121
            C CQ  +LTFRD  G  HGNCKS  + GA WCYV   + S C DL   S RF G+ WS  ACATP 
Sbjct:    7 CGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204          
BLAST of EMLSAG00000000311 vs. L. salmonis peptides
Match: EMLSAP00000000311 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:206967:207933:1 gene:EMLSAG00000000311 transcript:EMLSAT00000000311 description:"maker-LSalAtl2s1046-augustus-gene-1.15")

HSP 1 Score: 322.398 bits (825), Expect = 8.521e-114
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query:    1 MRDLDHFFPSTRNNFYLNQIMSLGIKFLLLSGVLVGFVHAQNKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPICSSELPPFIPFSASSSASSAPSKNVSDDVL 156
            MRDLDHFFPSTRNNFYLNQIMSLGIKFLLLSGVLVGFVHAQNKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPICSSELPPFIPFSASSSASSAPSKNVSDDVL
Sbjct:    1 MRDLDHFFPSTRNNFYLNQIMSLGIKFLLLSGVLVGFVHAQNKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPICSSELPPFIPFSASSSASSAPSKNVSDDVL 156          
BLAST of EMLSAG00000000311 vs. L. salmonis peptides
Match: EMLSAP00000001834 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:34086:34563:-1 gene:EMLSAG00000001834 transcript:EMLSAT00000001834 description:"maker-LSalAtl2s1318-augustus-gene-0.14")

HSP 1 Score: 191.815 bits (486), Expect = 9.500e-63
Identity = 104/136 (76.47%), Postives = 111/136 (81.62%), Query Frame = 0
Query:   21 MSLGIKFLLLSGVLVGFVHAQNKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPICSSELPPFIPFSASSSASSAPSKNVSDDVL 156
            MSLGIKFL+LS VLVGF H+QN ++AAAAAP PGGDDCNCQ ISL FRDSRG  +GNC+S  NGAQWCYVKYD FSPCPDLR SQRFRGRYWSNHA ATP ENSPI  S  PPFIP  A   ASS PSKNV+DDV 
Sbjct:    1 MSLGIKFLILSXVLVGFSHSQNIQEAAAAAPAPGGDDCNCQCISLQFRDSRGRTYGNCRSTTNGAQWCYVKYDGFSPCPDLRVSQRFRGRYWSNHAXATPAENSPIXRSVFPPFIPLXAXXPASSVPSKNVADDVF 136          
BLAST of EMLSAG00000000311 vs. L. salmonis peptides
Match: EMLSAP00000000858 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1146:143094:143555:-1 gene:EMLSAG00000000858 transcript:EMLSAT00000000858 description:"maker-LSalAtl2s1146-augustus-gene-0.4")

HSP 1 Score: 188.348 bits (477), Expect = 2.177e-61
Identity = 94/136 (69.12%), Postives = 110/136 (80.88%), Query Frame = 0
Query:   21 MSLGIKFLLLSGVLVGFVHAQNKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPICSSELPPFIPFSASSSASSAPSKNVSDDVL 156
            MSLGIKFLL    L+ F HAQN+++AAAAAP PGG+DCNCQ ISL FRDS+G IHGNCKS +NGAQWCYVKYD++SPCPDL  SQRF GRYWSNHACATP E+SP+C    PPF+    ++ ASSA SKNV+D V+
Sbjct:    1 MSLGIKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFV--RETAFASSASSKNVADGVV 134          
BLAST of EMLSAG00000000311 vs. L. salmonis peptides
Match: EMLSAP00000001837 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:72145:72812:1 gene:EMLSAG00000001837 transcript:EMLSAT00000001837 description:"maker-LSalAtl2s1318-augustus-gene-0.12")

HSP 1 Score: 186.037 bits (471), Expect = 1.621e-60
Identity = 94/136 (69.12%), Postives = 109/136 (80.15%), Query Frame = 0
Query:   21 MSLGIKFLLLSGVLVGFVHAQNKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPICSSELPPFIPFSASSSASSAPSKNVSDDVL 156
            M LG+ F+LLS VLVGF H+Q+ +QA AAAP PGG+DCNCQ +SL FRDSRGT +GNC+S INGAQWCYVKYDRFSPCPDL++S+RF GRYWSNHACATP ENSP C     P +PF ASS ASS  +  V+DDV 
Sbjct:    1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPF-ASSPASSVANSGVADDVF 135          
BLAST of EMLSAG00000000311 vs. L. salmonis peptides
Match: EMLSAP00000000366 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1053:57010:58418:-1 gene:EMLSAG00000000366 transcript:EMLSAT00000000366 description:"snap-LSalAtl2s1053-processed-gene-0.45")

HSP 1 Score: 98.2117 bits (243), Expect = 2.190e-26
Identity = 49/102 (48.04%), Postives = 61/102 (59.80%), Query Frame = 0
Query:   30 LSGVLVGFVHAQ----NKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPIC 127
            + G+ +G V A     +  Q  A AP     DC CQ I+L+F D  G   GNC+S  NGAQWCYV+ D  S CP L+ S R+RG+Y+SNHAC T P  SP C
Sbjct:    1 MRGIYIGIVLATCVYWSNAQQFAPAPINSQADCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGXSSCPXLKRSTRYRGKYYSNHACITLPAYSPEC 102          
BLAST of EMLSAG00000000311 vs. L. salmonis peptides
Match: EMLSAP00000002406 (pep:novel supercontig:LSalAtl2s:LSalAtl2s145:1581187:1602244:-1 gene:EMLSAG00000002406 transcript:EMLSAT00000002406 description:"maker-LSalAtl2s145-augustus-gene-16.13")

HSP 1 Score: 95.5153 bits (236), Expect = 3.140e-25
Identity = 52/133 (39.10%), Postives = 71/133 (53.38%), Query Frame = 0
Query:   16 YLNQIMSLGIKFLL-------LSGVLVGFVHAQNKKQAAAAAPDPGGD--DCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPICSSELPPFIPFSA 139
            Y+ + +S G+  L        L G+ +G    + K+++     D  G   +C CQ I L + D +G +HGNC S  +GA WCYVKY + SPC DL  S  F+ RYWS HAC TP E+S IC   + P     A
Sbjct:    7 YVKKNVSEGLTVLAEDTQTKELVGIAIG---TECKRKSKLYHKDSRGSHRNCLCQCIPLQYVDRKGIMHGNCTSTNDGALWCYVKYQKSSPCGDLVKSDIFQDRYWSYHACTTPVEDSSICKDTVIPLFFLGA 136          
BLAST of EMLSAG00000000311 vs. L. salmonis peptides
Match: EMLSAP00000005911 (pep:novel supercontig:LSalAtl2s:LSalAtl2s31:1336906:1338922:-1 gene:EMLSAG00000005911 transcript:EMLSAT00000005911 description:"maker-LSalAtl2s31-augustus-gene-12.7")

HSP 1 Score: 78.5666 bits (192), Expect = 7.464e-19
Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 0
Query:   17 LNQIMSLGIKFLLLSGVLVGFVHAQNKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYD--RFSPCPDLRASQRFRGRYWSNHACATP 120
            +N ++ L   FLL+ GVL+    AQ   +AAA A     +DC CQ  SLTFRD    ++GNC++   GAQWCY+  +  R   CPD + S+R  G+ WS  +CATP
Sbjct:    1 MNSLIVLS-SFLLI-GVLLSKSEAQTVLKAAAPA-STSINDCFCQCSSLTFRDRNNRVNGNCRTTFQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATP 103          
BLAST of EMLSAG00000000311 vs. L. salmonis peptides
Match: EMLSAP00000001327 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:219743:221280:1 gene:EMLSAG00000001327 transcript:EMLSAT00000001327 description:"maker-LSalAtl2s1223-augustus-gene-2.67")

HSP 1 Score: 73.559 bits (179), Expect = 4.325e-17
Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   48 AAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYD--RFSPCPDLRASQRFRGRYWSNHACATP 120
            AAAP     DC CQ  SL+FRD    ++GNC++  NG QWCY+  +  R   CPD   S RF G+ WS  +CATP
Sbjct:   11 AAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP 85          
BLAST of EMLSAG00000000311 vs. L. salmonis peptides
Match: EMLSAP00000004889 (pep:novel supercontig:LSalAtl2s:LSalAtl2s257:179358:180381:1 gene:EMLSAG00000004889 transcript:EMLSAT00000004889 description:"maker-LSalAtl2s257-augustus-gene-1.12")

HSP 1 Score: 60.8474 bits (146), Expect = 7.491e-13
Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 0
Query:   56 DDCNCQXISLTFRDSRGTIHGNCKSM-INGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATP 120
             +C CQ  SLTF DS G I GNC+S    GA+WCY+ +     C D + S RFR + WS  ACATP
Sbjct:   20 QNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSH--TCNDAQYSSRFRNQ-WSYEACATP 82          
BLAST of EMLSAG00000000311 vs. L. salmonis peptides
Match: EMLSAP00000007123 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241:84844:-1 gene:EMLSAG00000007123 transcript:EMLSAT00000007123 description:"maker-LSalAtl2s401-augustus-gene-0.14")

HSP 1 Score: 58.5362 bits (140), Expect = 1.250e-11
Identity = 42/100 (42.00%), Postives = 50/100 (50.00%), Query Frame = 0
Query:   26 KFLLLSGVLVGFVHAQNKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSM-INGAQWCYVKYDRFSPCPDLRASQR----FRGRYWSNHACATP 120
            KFL++S V+V    AQ+    A +       +C CQ  +  FRD RG   GNC S    GA+WCYV  DR   C D R S R     R R  S  ACATP
Sbjct:    4 KFLIIS-VVVALTSAQDITLKAPSLAV----NCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYV--DRGHTCQDTRGSGRNDQFGRRRQISYEACATP 96          
BLAST of EMLSAG00000000311 vs. nr
Match: gi|155966304|gb|ABU41105.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 103.219 bits (256), Expect = 2.005e-25
Identity = 50/102 (49.02%), Postives = 63/102 (61.76%), Query Frame = 0
Query:   30 LSGVLVGFVHAQ----NKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPIC 127
            + G+ +G V A     +  Q  A AP     DC CQ I+L+F D  G   GNC+S  NGAQWCYV+ D +S CPDL+ S R+RG+Y+SNHAC T P  SP C
Sbjct:    1 MRGIYIGIVLATCVYWSNAQQFAPAPINSQADCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGYSSCPDLKRSTRYRGKYYSNHACITLPAYSPEC 102          
BLAST of EMLSAG00000000311 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 62.3882 bits (150), Expect = 7.401e-13
Identity = 32/77 (41.56%), Postives = 42/77 (54.55%), Query Frame = 0
Query:   57 DCNCQXISLTFRDSRGTIHGNCKSM-INGAQWCYVKYDRFSPCPDLRASQRF-----RGRYWSNHACATPPENSPIC 127
            +C CQ    T+RD+ G + GNC+S     A WCY+    F+ C D+R S+       R R WS  AC+TP   SPIC
Sbjct:   47 NCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTPALTSPIC 123          
BLAST of EMLSAG00000000311 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold82_size396747-snap-gene-2.41 (protein:Tk06844 transcript:maker-scaffold82_size396747-snap-gene-2.41-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 58.151 bits (139), Expect = 6.157e-11
Identity = 37/93 (39.78%), Postives = 45/93 (48.39%), Query Frame = 0
Query:   29 LLSGVLVGFVHAQNKKQA-AAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATP 120
             L  V+VG      K  + A A  +   D C+CQ  + TF+    T+HGNC     GA WCYVK    S C D   S R  G +WS  AC TP
Sbjct:  219 FLGEVVVGRCAILVKNASLAKAQSEITQDVCDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGTP 310          
BLAST of EMLSAG00000000311 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 51.2174 bits (121), Expect = 9.259e-9
Identity = 31/77 (40.26%), Postives = 41/77 (53.25%), Query Frame = 0
Query:   58 CNCQXISLTFRDSRGTIHGNCKSM-INGAQWCYVKYDRFS-PCPDLRASQRFRG-----RYWSNHACATPPENSPIC 127
            CNCQ  + T++     IHGNC S     A+WCYV  D++S  C D++ S+  R      R WS  AC+TP   S  C
Sbjct:   45 CNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYV--DQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTPERASHQC 119          
BLAST of EMLSAG00000000311 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 47.7506 bits (112), Expect = 1.730e-7
Identity = 28/77 (36.36%), Postives = 42/77 (54.55%), Query Frame = 0
Query:   58 CNCQXISLTFRDSRGTIHGNCKSMING-AQWCYVKYDRF-SPCPDLRASQRFRG-----RYWSNHACATPPENSPIC 127
            CNCQ  + T++     IHGNC +  +   +WCY+  D++ + C D++ S+  R      R WS  AC+TP   SP C
Sbjct:   47 CNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYL--DQYNNDCDDIQYSKNRRDSFGNLREWSYQACSTPQLGSPQC 121          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000311 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000311 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592953585|gb|GAXK01004968.1|1.197e-1652.11TSA: Calanus finmarchicus comp348412_c0_seq1 trans... [more]
gi|592932379|gb|GAXK01026174.1|2.188e-1553.52TSA: Calanus finmarchicus comp18158_c1_seq4 transc... [more]
gi|592932381|gb|GAXK01026172.1|3.955e-1456.34TSA: Calanus finmarchicus comp18158_c1_seq2 transc... [more]
gi|592932380|gb|GAXK01026173.1|1.602e-1349.30TSA: Calanus finmarchicus comp18158_c1_seq3 transc... [more]
gi|592932382|gb|GAXK01026171.1|3.923e-1350.70TSA: Calanus finmarchicus comp18158_c1_seq1 transc... [more]
gi|592932378|gb|GAXK01026175.1|5.171e-1357.14TSA: Calanus finmarchicus comp18158_c1_seq5 transc... [more]
gi|592932365|gb|GAXK01026188.1|6.322e-1355.38TSA: Calanus finmarchicus comp18158_c2_seq13 trans... [more]
gi|592932366|gb|GAXK01026187.1|7.592e-1355.38TSA: Calanus finmarchicus comp18158_c2_seq12 trans... [more]
gi|592906544|gb|GAXK01051831.1|2.261e-1253.62TSA: Calanus finmarchicus comp28981_c1_seq1 transc... [more]
gi|592932371|gb|GAXK01026182.1|2.544e-1254.55TSA: Calanus finmarchicus comp18158_c2_seq7 transc... [more]

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BLAST of EMLSAG00000000311 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 18
Match NameE-valueIdentityDescription
EMLSAP000000003118.521e-114100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:2069... [more]
EMLSAP000000018349.500e-6376.47pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:3408... [more]
EMLSAP000000008582.177e-6169.12pep:novel supercontig:LSalAtl2s:LSalAtl2s1146:1430... [more]
EMLSAP000000018371.621e-6069.12pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:7214... [more]
EMLSAP000000003662.190e-2648.04pep:novel supercontig:LSalAtl2s:LSalAtl2s1053:5701... [more]
EMLSAP000000024063.140e-2539.10pep:novel supercontig:LSalAtl2s:LSalAtl2s145:15811... [more]
EMLSAP000000059117.464e-1943.40pep:novel supercontig:LSalAtl2s:LSalAtl2s31:133690... [more]
EMLSAP000000013274.325e-1748.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:2197... [more]
EMLSAP000000048897.491e-1350.00pep:novel supercontig:LSalAtl2s:LSalAtl2s257:17935... [more]
EMLSAP000000071231.250e-1142.00pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241... [more]

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BLAST of EMLSAG00000000311 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000311 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000311 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|155966304|gb|ABU41105.1|2.005e-2549.02hypothetical protein [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000000311 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4
Match NameE-valueIdentityDescription
maker-scaffold381_size190066-snap-gene-0.317.401e-1341.56protein:Tk01605 transcript:maker-scaffold381_size1... [more]
maker-scaffold82_size396747-snap-gene-2.416.157e-1139.78protein:Tk06844 transcript:maker-scaffold82_size39... [more]
maker-scaffold381_size190066-snap-gene-0.309.259e-940.26protein:Tk01607 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.321.730e-736.36protein:Tk01608 transcript:maker-scaffold381_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1046supercontigLSalAtl2s1046:206967..207933 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1046-augustus-gene-1.15
Biotypeprotein_coding
EvidenceIEA
Notehypothetical protein [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000311 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000311EMLSAT00000000311-696158Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1046:206967..207933+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000311-683077 ID=EMLSAG00000000311-683077|Name=EMLSAG00000000311|organism=Lepeophtheirus salmonis|type=gene|length=967bp|location=Sequence derived from alignment at LSalAtl2s1046:206967..207933+ (Lepeophtheirus salmonis)
CTTTTTATTAACTAATTTTTCCTTTTAAGAAGATATACCGTGTCTGGAGT AAAAAAAGTAGAAATTGAAAACGAATTATCTTGTGTTTAATCCGTTAAGG GGTTGTGGATTAATATAAAAGTAAAAGTTATATGAAATGAGAGACTTAGA TCATTTTTTCCCTTCTACTCGAAACAACTTCTATTTAAACCAAATCATGA GTCTTGGAATCAAGTTTCTTCTCTTGAGTGGAGTCCTTGTTGGATTTGTT CATGCACAAAATAAAAAACAAGCAGCAGCTGCAGCTCCAGACCCTGGAGG AGACGACTGTAATTGCCAATGKATTTCTTTAACGTTCAGAGATTCAAGAG GAACAATACACGGAAACTGCAAGAGGTAAGGCAACTGTATAGAGATCGGT AGATATACGTATAATCTATCATTCTTTCTTCTTACTTTATAGTATGATCA ATGGAGCGCAGTGGTGTTATGTCAAATATGATAGATTTAGCCCATGTCCT GATCTTCGGGCATCCCAACGTTTCAGAGGACGTTACTGGTCCAACCATGC CTGTGCCACTCCACCTGAAAACTCTCCTATCTGTAGTTCTGAATTACCCC CATTTATTCCATTCTCAGCTTCCTCTTCTGCCTCTTCCGCTCCATCCAAG AATGTCTCCGATGACGTCCTTTAATCTCATTTATCTGTTTAGTTAGTTTT TATTGTCAAAGAACTCTGATTTTATAAGTATCATCAATAATGAATATTGA ATGCGTTTCTTAAAAAAAGTACTTGTGATCATTAAATGTAATAAAGTGTT TCAACATATTTTCCTTGGCTATTAATTGTATATATACATAGGTACTTCAT TTATTCTATTGATTTAGGTTCAAAATGATGAATGTAAATGGCAAGGTGAA TAAATACATCGGGTAGGTTACCCATCTTCAAAGTATAACTAACACTCATC TACAAAAAGAAAAAAAA
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