EMLSAG00000000387, EMLSAG00000000387-683153 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000387
Unique NameEMLSAG00000000387-683153
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
Y F203 387 female
  1. PreAdult2
-Missing-
-Missing-
06.05.2015 - 12:21
08.06.2015 - 00:00
Homology
BLAST of EMLSAG00000000387 vs. C. finmarchicus
Match: gi|592864312|gb|GAXK01093250.1| (TSA: Calanus finmarchicus comp721368_c0_seq7 transcribed RNA sequence)

HSP 1 Score: 61.2326 bits (147), Expect = 1.195e-10
Identity = 39/140 (27.86%), Postives = 67/140 (47.86%), Query Frame = 0
Query:    1 MGSLMCIAGLSTLVIPFLVNFPTMGLFRFTQCFCIGAFMTADASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSS-------DSSGNMPHFEIDSLYG-VQSIAWPFLIGGIFTAFT 132
            +GS +  AG+   ++P++ +F  +        F    F   + +L +Y +GP +S P+  A++A  G+G   G+++ RPFLP   +D   +CG            +  GN+    +D L   + +I WPFLI      FT
Sbjct:  271 LGSFILCAGVFVGLVPWVSSFSILMPALLVAGFSSSCFNVGNCALTVYMLGPERSAPYMQALNAFVGLGFMFGSLIVRPFLPEQAED-SSICGNSKEQMMTNVTFNEEGNV---YVDELVETIPAIVWPFLIIASIHIFT 678          
BLAST of EMLSAG00000000387 vs. C. finmarchicus
Match: gi|592864317|gb|GAXK01093245.1| (TSA: Calanus finmarchicus comp721368_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 61.6178 bits (148), Expect = 1.558e-10
Identity = 39/140 (27.86%), Postives = 67/140 (47.86%), Query Frame = 0
Query:    1 MGSLMCIAGLSTLVIPFLVNFPTMGLFRFTQCFCIGAFMTADASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSS-------DSSGNMPHFEIDSLYG-VQSIAWPFLIGGIFTAFT 132
            +GS +  AG+   ++P++ +F  +        F    F   + +L +Y +GP +S P+  A++A  G+G   G+++ RPFLP   +D   +CG            +  GN+    +D L   + +I WPFLI      FT
Sbjct:  677 LGSFILCAGVFVGLVPWVSSFSILMPALLVAGFSSSCFNVGNCALTVYMLGPERSAPYMQALNAFVGLGFMFGSLIVRPFLPEQAED-SSICGNSKEQMMTNVTFNEEGNV---YVDELVETIPAIVWPFLIIASIHIFT 1084          

HSP 2 Score: 41.2022 bits (95), Expect = 1.167e-3
Identity = 35/123 (28.46%), Postives = 51/123 (41.46%), Query Frame = 0
Query:   61 AIHAICGVGCFLGTILARPFLPPSNDDME----DLCGKGNSSDSSGNMPHFEIDSLYGVQSIAWPFLIGGIFTA--FTFGICGPLALQPXXXXXXDSCYNGGFMCGRIVSVGLAGIIRPRNMI 177
            +IH   G+  F+  I   P LP   +  E    +LC K    +    + H  I                G F +  +TFGICGP  + P  A  + + Y   F+ GR+  V LA  ++P  MI
Sbjct:  332 SIHIFTGLAIFVLAISKCP-LPEYKEKEEKPDAELCNK-TEKEEKNILKHPYILLFLSFLFFTISSGTEGFFISQTYTFGICGPHKMMPTKAASLTTVYFSCFLVGRLSGVFLASRLQPHVMI 694          
BLAST of EMLSAG00000000387 vs. C. finmarchicus
Match: gi|592864318|gb|GAXK01093244.1| (TSA: Calanus finmarchicus comp721368_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 61.2326 bits (147), Expect = 1.704e-10
Identity = 41/144 (28.47%), Postives = 67/144 (46.53%), Query Frame = 0
Query:    1 MGSLMCIAGLSTLVIPFLVNFPTMGLFRFTQCFCIGAFMTADASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSS-----------DSSGNMPHFEIDSLY-GVQSIAWPFLIGGIFTAFT 132
            +GS +  AG+   ++P++ +F  +        F    F   + +L +Y +GP +S P+  A++A  GVG   G+++ RPFLP   +D   +CG                +  GN+    +D L   +  I WPFLI   F  FT
Sbjct:  677 LGSFILCAGVFVGLVPWVSSFSILMPALLVAGFSSSCFNVGNCALTVYMLGPERSAPYMQALNAFVGVGFMFGSLIVRPFLPEQEED-SSICGSIKEEMMTNFSFTGEVNEEGNV---YVDELVENIPDIVWPFLIILSFHIFT 1096          

HSP 2 Score: 38.1206 bits (87), Expect = 1.035e-2
Identity = 20/51 (39.22%), Postives = 28/51 (54.90%), Query Frame = 0
Query:  127 IFTAFTFGICGPLALQPXXXXXXDSCYNGGFMCGRIVSVGLAGIIRPRNMI 177
            I   +TFGICGP  + P  A  + + Y   F+ GR+  V LA  ++P  MI
Sbjct:  332 ISQTYTFGICGPHKMMPTKAASLTTVYFSCFLVGRLSGVFLASRLQPHVMI 484          
BLAST of EMLSAG00000000387 vs. C. finmarchicus
Match: gi|592864316|gb|GAXK01093246.1| (TSA: Calanus finmarchicus comp721368_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 60.4622 bits (145), Expect = 3.079e-10
Identity = 40/144 (27.78%), Postives = 67/144 (46.53%), Query Frame = 0
Query:    1 MGSLMCIAGLSTLVIPFLVNFPTMGLFRFTQCFCIGAFMTADASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSS-----------DSSGNMPHFEIDSL-YGVQSIAWPFLIGGIFTAFT 132
            +GS +  AG+   ++P++ +F  +        F    F   + +L +Y +GP +S P+  A++A  G+G   G+++ RPFLP   +D   +CG                +  GN+    +D L   +  I WPFLI   F  FT
Sbjct:  316 LGSFILCAGVFVGLVPWVSSFSILMPALLVAGFSSSCFNVGNCALTVYMLGPERSAPYMQALNAFVGLGFMFGSLIVRPFLPEQEED-SSICGSIKEEMMTNFSFTGEVNEEGNV---YVDELVENIPDIVWPFLIILSFHIFT 735          

HSP 2 Score: 30.8018 bits (68), Expect = 2.439e+0
Identity = 30/113 (26.55%), Postives = 47/113 (41.59%), Query Frame = 0
Query:   61 AIHAICGVGCFLGTILARPFLPPSNDDME----DLCGKGNSSDSSGNMPHFEIDSLYGVQSIAWPFLIGGIF--TAFTFGICGPLALQPXXXXXXDSCYNGGFMCGRIVSVGL 167
            + H   G+  F+  ++  P LP   +  E    +LC K    + +  + H  I         A      G F   ++TFGICGP  + P  A  + + Y   F+ GR+  V L
Sbjct:    1 SFHIFTGLAFFVLAMVKCP-LPEHKEKTEKADEELCNKTEKKEMN-ILKHPYILLFLSFLYFAISSGTEGFFISQSYTFGICGPHKMIPTKAASLTTVYFSCFLAGRLSGVFL 333          
BLAST of EMLSAG00000000387 vs. C. finmarchicus
Match: gi|592864314|gb|GAXK01093248.1| (TSA: Calanus finmarchicus comp721368_c0_seq5 transcribed RNA sequence)

HSP 1 Score: 60.077 bits (144), Expect = 3.473e-10
Identity = 40/144 (27.78%), Postives = 67/144 (46.53%), Query Frame = 0
Query:    1 MGSLMCIAGLSTLVIPFLVNFPTMGLFRFTQCFCIGAFMTADASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSS-----------DSSGNMPHFEIDSL-YGVQSIAWPFLIGGIFTAFT 132
            +GS +  AG+   ++P++ +F  +        F    F   + +L +Y +GP +S P+  A++A  G+G   G+++ RPFLP   +D   +CG                +  GN+    +D L   +  I WPFLI   F  FT
Sbjct:  271 LGSFILCAGVFVGLVPWVSSFSILMPALLVAGFSSSCFNVGNCALTVYMLGPERSAPYMQALNAFVGLGFMFGSLIVRPFLPEQEED-SSICGSIKEEMMTNFSFTGEVNEEGNV---YVDELVENIPDIVWPFLIILSFHIFT 690          
BLAST of EMLSAG00000000387 vs. C. finmarchicus
Match: gi|592796981|gb|GAXK01157587.1| (TSA: Calanus finmarchicus comp3295217_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 60.077 bits (144), Expect = 4.036e-10
Identity = 37/115 (32.17%), Postives = 60/115 (52.17%), Query Frame = 0
Query:   36 GAFMTADASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDM---EDLCGKGNSSDSSGNMPHFEIDSLYGVQ-----------SIAWPFLIGGI---FTAFTF 133
            G+  TA  SL+++ +GP +S PFT ++HA   +G  LG+++ RPFLP   +++    +L  +G S+ S     +  +D    V+           +I WPFLI  +    TAF F
Sbjct:  394 GSLSTASNSLVLFMLGPDRSPPFTQSLHAFVALGFVLGSLIVRPFLPAKEENLSVCNELEPQGYSNVSQDK--NMVVDQELSVEDVSTIVDAHIPNIVWPFLIIAVVNFITAFGF 732          

HSP 2 Score: 44.2838 bits (103), Expect = 7.850e-5
Identity = 21/53 (39.62%), Postives = 30/53 (56.60%), Query Frame = 0
Query:  130 AFTFGICGPLALQPXXXXXXDSCYNGGFMCGRIVSVGLAGIIRPRNMIYICLL 182
             FTFGICGP  ++P  A  + + Y   F+ GR   V L+  +RP+ MI   L+
Sbjct:   46 TFTFGICGPHKMEPEMAASLTTVYFASFLAGRFSGVLLSTKLRPQTMILASLI 204          
BLAST of EMLSAG00000000387 vs. C. finmarchicus
Match: gi|592864309|gb|GAXK01093253.1| (TSA: Calanus finmarchicus comp721368_c0_seq10 transcribed RNA sequence)

HSP 1 Score: 53.5286 bits (127), Expect = 2.329e-8
Identity = 30/99 (30.30%), Postives = 50/99 (50.51%), Query Frame = 0
Query:   42 DASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSS-------DSSGNMPHFEIDSLYG-VQSIAWPFLIGGIFTAFT 132
            +++  ++ +GP +S P+  A++A  GVG   G+++ RPFLP   +D   +CG            +  GN+    +D L   + +I WPFLI      FT
Sbjct:  271 NSAFTVFMLGPERSAPYMQALNAFVGVGFMFGSLIVRPFLPEQAED-SSICGNSKEQMMTNVTFNEEGNV---YVDELVETIPAIVWPFLIIASIHIFT 555          
BLAST of EMLSAG00000000387 vs. C. finmarchicus
Match: gi|592864311|gb|GAXK01093251.1| (TSA: Calanus finmarchicus comp721368_c0_seq8 transcribed RNA sequence)

HSP 1 Score: 53.5286 bits (127), Expect = 2.450e-8
Identity = 38/161 (23.60%), Postives = 67/161 (41.61%), Query Frame = 0
Query:   42 DASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSS-----------DSSGNMPHFEIDSL-YGVQSIAWPFLI---GGIFTAFTFGICG----PLALQPXXXXXXDSCYNGGFMCGRIVSVGLAGIIRPRNMIYICLLF 183
            +++  ++ +GP +S P+  A++A  GVG   G+++ RPFLP   +D   +CG                +  GN+    +D L   +  I WPFLI     IFT   F +      PL          D       +C +     +  +  P  ++++  L+
Sbjct:  157 NSAFTVFMLGPERSAPYMQALNAFVGVGFMFGSLIVRPFLPEQEED-SSICGSIKEEMMTNFSFTGEVNEEGNV---YVDELVENIPDIVWPFLIILSFHIFTGLAFFVLAMVKCPLPEHKEKTEKADEE-----LCNKTEKKEMNILKHPYILLFLSFLY 612          

HSP 2 Score: 31.187 bits (69), Expect = 1.863e+0
Identity = 30/115 (26.09%), Postives = 49/115 (42.61%), Query Frame = 0
Query:   61 AIHAICGVGCFLGTILARPFLPPSNDDME----DLCGKGNSSDSS-GNMPH---FEIDSLYGVQSIAWPFLIGGIFTAFTFGICGPLALQPXXXXXXDSCYNGGFMCGRIVSVGL 167
            + H   G+  F+  ++  P LP   +  E    +LC K    + +    P+   F     + + S    F I     ++TFGICGP  + P  A  + + Y   F+ GR+  V L
Sbjct:    1 SFHIFTGLAFFVLAMVKCP-LPEHKEKTEKADEELCNKTEKKEMNILKHPYILLFLSFLYFAISSGTEGFFIS---QSYTFGICGPHKMIPTKAASLTTVYFSCFLAGRLSGVFL 333          
BLAST of EMLSAG00000000387 vs. C. finmarchicus
Match: gi|592864313|gb|GAXK01093249.1| (TSA: Calanus finmarchicus comp721368_c0_seq6 transcribed RNA sequence)

HSP 1 Score: 54.299 bits (129), Expect = 3.198e-8
Identity = 30/99 (30.30%), Postives = 50/99 (50.51%), Query Frame = 0
Query:   42 DASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSS-------DSSGNMPHFEIDSLYG-VQSIAWPFLIGGIFTAFT 132
            +++  ++ +GP +S P+  A++A  GVG   G+++ RPFLP   +D   +CG            +  GN+    +D L   + +I WPFLI      FT
Sbjct:  677 NSAFTVFMLGPERSAPYMQALNAFVGVGFMFGSLIVRPFLPEQAED-SSICGNSKEQMMTNVTFNEEGNV---YVDELVETIPAIVWPFLIIASIHIFT 961          

HSP 2 Score: 41.2022 bits (95), Expect = 9.603e-4
Identity = 34/122 (27.87%), Postives = 54/122 (44.26%), Query Frame = 0
Query:   61 AIHAICGVGCFLGTILARPFLPPSNDDME----DLCGKGNSSDSS-GNMPHFEIDSLYGVQSIAWPFLIGGIFTAFTFGICGPLALQPXXXXXXDSCYNGGFMCGRIVSVGLAGIIRPRNMI 177
            +IH   G+  F+  I   P LP   +  E    +LC K    + +    P+  +   +   +I+       I   +TFGICGP  + P  A  + + Y   F+ GR+  V LA  ++P  MI
Sbjct:  332 SIHIFTGLAIFVLAISKCP-LPEYKEKEEKPDAELCNKTEKEEKNILKHPYILLFLSFLFFTISSGTEGFFISQTYTFGICGPHKMMPTKAASLTTVYFSCFLVGRLSGVFLASRLQPHVMI 694          
BLAST of EMLSAG00000000387 vs. C. finmarchicus
Match: gi|592864310|gb|GAXK01093252.1| (TSA: Calanus finmarchicus comp721368_c0_seq9 transcribed RNA sequence)

HSP 1 Score: 52.373 bits (124), Expect = 6.453e-8
Identity = 31/103 (30.10%), Postives = 50/103 (48.54%), Query Frame = 0
Query:   42 DASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSS-----------DSSGNMPHFEIDSL-YGVQSIAWPFLIGGIFTAFT 132
            +++  ++ +GP +S P+  A++A  GVG   G+++ RPFLP   +D   +CG                +  GN+    +D L   +  I WPFLI   F  FT
Sbjct:  271 NSAFTVFMLGPERSAPYMQALNAFVGVGFMFGSLIVRPFLPEQEED-SSICGSIKEEMMTNFSFTGEVNEEGNV---YVDELVENIPDIVWPFLIILSFHIFT 567          
BLAST of EMLSAG00000000387 vs. L. salmonis peptides
Match: EMLSAP00000000387 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1061:189630:200459:-1 gene:EMLSAG00000000387 transcript:EMLSAT00000000387 description:"maker-LSalAtl2s1061-augustus-gene-2.3")

HSP 1 Score: 370.933 bits (951), Expect = 5.855e-132
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
Query:    1 MGSLMCIAGLSTLVIPFLVNFPTMGLFRFTQCFCIGAFMTADASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSSDSSGNMPHFEIDSLYGVQSIAWPFLIGGIFTAFTFGICGPLALQPAAAIIIDSCYNGGFMCGRIVSVGLAGIIRPRNMIYICLLFAFVG 187
            MGSLMCIAGLSTLVIPFLVNFPTMGLFRFTQCFCIGAFMTADASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSSDSSGNMPHFEIDSLYGVQSIAWPFLIGGIFTAFTFGICGPLALQPAAAIIIDSCYNGGFMCGRIVSVGLAGIIRPRNMIYICLLFAFVG
Sbjct:    1 MGSLMCIAGLSTLVIPFLVNFPTMGLFRFTQCFCIGAFMTADASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGKGNSSDSSGNMPHFEIDSLYGVQSIAWPFLIGGIFTAFTFGICGPLALQPAAAIIIDSCYNGGFMCGRIVSVGLAGIIRPRNMIYICLLFAFVG 187          
BLAST of EMLSAG00000000387 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold948_size77650-snap-gene-0.12 (protein:Tk08296 transcript:maker-scaffold948_size77650-snap-gene-0.12-mRNA-1 annotation:"sodium-dependent glucose transporter 1")

HSP 1 Score: 106.686 bits (265), Expect = 5.311e-29
Identity = 52/129 (40.31%), Postives = 79/129 (61.24%), Query Frame = 0
Query:    5 MCIAGLSTLVIPFLVNFPTMGLFRFTQCFCIGAFMTADASLIIYXMGPIKSRPFTNAIHAICGVGCFLGTILARPFLPPSNDDMEDLCGK--GNSSDSSG---NMPHFEIDSLYGVQSIAWPFLIGGIF 128
            M + G+  +++PF   F  +   R  Q   +GA++T D+SL++Y MGPIKSRPFTNA+HA  G+G    T L RPFLP   + +++      GN++  SG   + P  +I+ L+G+Q IAWPF+  G +
Sbjct:   90 MSLTGVGMIILPFTATFAFLVTIRALQYTLLGAYITGDSSLLVYTMGPIKSRPFTNALHACVGIGFLAATFLVRPFLPSEANALKNQAEVCFGNTTAPSGGASDEPRNDIEYLWGLQKIAWPFVFSGAW 218          
BLAST of EMLSAG00000000387 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold17_size721972-snap-gene-6.22 (protein:Tk09984 transcript:maker-scaffold17_size721972-snap-gene-6.22-mRNA-1 annotation:"sodium-dependent glucose transporter 1")

HSP 1 Score: 57.7658 bits (138), Expect = 2.311e-10
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0
Query:  130 AFTFGICGPLALQPAAAIIIDSCYNGGFMCGRIVSVGLAGIIRP----RNMIYICLLFAFV 186
             FTFG+CGPL L P+ A++ID  +NGGFM GR   + +A I+ P    ++ I +CL+ + V
Sbjct:  284 EFTFGLCGPLHLNPSEAVVIDKSFNGGFMVGRFFGMFVAHIVPPKLLLKSSIVMCLMLSAV 344          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000387 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000387 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592864312|gb|GAXK01093250.1|1.195e-1027.86TSA: Calanus finmarchicus comp721368_c0_seq7 trans... [more]
gi|592864317|gb|GAXK01093245.1|1.558e-1027.86TSA: Calanus finmarchicus comp721368_c0_seq2 trans... [more]
gi|592864318|gb|GAXK01093244.1|1.704e-1028.47TSA: Calanus finmarchicus comp721368_c0_seq1 trans... [more]
gi|592864316|gb|GAXK01093246.1|3.079e-1027.78TSA: Calanus finmarchicus comp721368_c0_seq3 trans... [more]
gi|592864314|gb|GAXK01093248.1|3.473e-1027.78TSA: Calanus finmarchicus comp721368_c0_seq5 trans... [more]
gi|592796981|gb|GAXK01157587.1|4.036e-1032.17TSA: Calanus finmarchicus comp3295217_c0_seq1 tran... [more]
gi|592864309|gb|GAXK01093253.1|2.329e-830.30TSA: Calanus finmarchicus comp721368_c0_seq10 tran... [more]
gi|592864311|gb|GAXK01093251.1|2.450e-823.60TSA: Calanus finmarchicus comp721368_c0_seq8 trans... [more]
gi|592864313|gb|GAXK01093249.1|3.198e-830.30TSA: Calanus finmarchicus comp721368_c0_seq6 trans... [more]
gi|592864310|gb|GAXK01093252.1|6.453e-830.10TSA: Calanus finmarchicus comp721368_c0_seq9 trans... [more]

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BLAST of EMLSAG00000000387 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000003875.855e-132100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1061:1896... [more]
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BLAST of EMLSAG00000000387 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000387 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000387 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000387 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 2
Match NameE-valueIdentityDescription
maker-scaffold948_size77650-snap-gene-0.125.311e-2940.31protein:Tk08296 transcript:maker-scaffold948_size7... [more]
maker-scaffold17_size721972-snap-gene-6.222.311e-1044.26protein:Tk09984 transcript:maker-scaffold17_size72... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1061supercontigLSalAtl2s1061:189630..200459 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1061-augustus-gene-2.3
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000387 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000387EMLSAT00000000387-696234Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1061:189630..200459-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000387-683153 ID=EMLSAG00000000387-683153|Name=EMLSAG00000000387|organism=Lepeophtheirus salmonis|type=gene|length=10830bp|location=Sequence derived from alignment at LSalAtl2s1061:189630..200459- (Lepeophtheirus salmonis)
ACTTACGGAATTCAAAGGCCAAACTCGTATACATGGGATCCCTTATGTGC ATTGCCGGCCTTTCTACATTGGTGATACCCTTCCTTGTCAATTTCCCCAC TATGGGATTATTCCGATTCACTCAATGCTTTTGCATTGGGGCATTTATGA CTGCAGATGCATCCCTCATTATCTATKCCATGGGTCCCATTAAGTCCCGT CCATTCACAAATGCTATTCATGCCATTTGTGGCGTTGGTTGCTTCCTTGG AACGATTCTGGGTAAGGAGTATTTATTAATACTTTAATTTATAGGAATAA AGATTTGTTTCTACGTCTTTTTTTTTAGCACGTCCATTCCTACCACCAAG TAATGATGATATGGAAGATCTTTGTGGCAAAGGAAATTCCTCGGATAGTA GTGGAAATATGCCTCATTTTGAGATTGATTCACTTTATGGAGTTCAGAGT ATTGCATGGCCGTTCCTCATTGGTGGAATATTTACAGTTGCTGCCTCAAT GGGATATATTATTCTTGGTAAGGATTTATTTTCATTTATAAAAGAATAAA TAAAACTTCYTCCTTATAGATATAAGTAAAAGTGGGCATTTTGTAAAGTA CAGAGAGAAAGTGGGAGGAAAATTTATAATAGTACGTAATTAAGACCCTT GCATACTTCAGCTGCCTTTAATATAATTTTGAAGGAAATAATAGATTGCT GTTATTAAGAGAGGAGAGCCTTTAAAATTTACACAAACATTATTCTTGAA AAAAAATTGTATTCAAACATATACAAGCTATTAATCCTGTGGAAAGGACT TTTTTTTTCGAAACGCAATTTTATCTCCAACCAGATGTCAGATTTTAAAA AAGAAAACCAAATTTTGAAAGCTTGATAGACTCTGATTTATTTATTCAAT AAAATCACCGTTAGCCTCAATTAAAATCTCTGTATGAGGCCCAAAAGAAC GAGTGGGCCTTTACCACTTAGTCTCTTGTAAAAAAATCCTTGAAGTTTGT CTTTGGTGTTGCAGGTGGTTCGTTTGATTTTTCGTTCGATTGCGTCGTTC GTTTTCGAGGTGTGGTAGGGAGGCAAGTCCCGTTACTACATGTAAGACAT GTGATCAGTAATTAACTTAGTTTAAAAACAAAATCTGCCAAATAACACTA TTTAAGTTACCTATCCGACATATCTATTAAATGAAGAATACATAATTAAT TATCCCAATATCATTATAAATTGAATTAATATAAGCAATAGCCTATATAA ATTGATTAAATATAATTTTTCGACCAAATGTCTGTTTGGCAAAATGTGCA TTCGGTGAATATTCCGCTCGTGCTATAAAATGTGTCTTGTTGGTAAGTAA AGGAGTTATTTCTGAAAATTTGAAGATTCTTGGGAGATAAACAGCTTAGC TGTCCTGACATTGTATTTGATTAGGAAATGAAAATTKCTCCCCTCCATAT CCCACAAGGATATACTCAGGAATAACTCAAATTTCGATCCTCAAGTCAAC TCCAACCATTGATACTCTTCATCTAAGTTCTAGTTATAACTTTGTACATA CATGCAGAATTATTTACCGATTTTTGTTCAGAACATATTGCGGACAATAA TGACATTTCGAATGACTTGACTTGTGATCAAATTTAATCAATGTAGCCAC CATTTGACTCAATGACACMGGRCAGKCCKCGTCTGAASCTGCCACAGACT TGCTGGATGTAATCAGCGTCCATGGAGGCCCAGCCCTTGTTGACAGCAGC CCTTTAGGCATTTATGTTCTTGTGTCGTTTTTTGCAGGCCTTGGTCTCCA CGTGTGCCTAGATAGGGAAGTCTAGTGGGTTCAGATCTGGGCTCTGAGGG GGCTAGTACTCGTTGGCCAAAAGTTCATGTTGTCCTTGAGCCACTCCTGA GCTTTCTTGGAAGTGTGGGTGGGTGCTCCATCTTGTTGAAAAACCCAAGG AGAGTTGCCGACTATGGATTTGATCCACGGAAGGACCTTGGACGCCAGAA TCTTCACATAAGCCTCCGCTGTTAATCTGAGCCAGTGGGGAACCATACCG GCTTCATGGCCTTCCTGTTGGATCTCCAAACATCTCCAAAGCTCACAACA CGGTCATTTTGCCTGTTGAAAACAGGATCGACCGTAAAAGTTTTCTCATC TGAGAAAATGATGATGCGTCCAGATGAGCTTTTGATATCATTCAAGATTT TCTTGGCACGCTCAAGTCTGACTTTTTGCTGATGTTAAGTTAGCAGAGGG CGTTCAGTACGCCTCAGGGACTGTCCTCCATCCCTTTTCAATGCCCTTGA AACAGTTGATCTCGACGTTCCCATCTTTCTGGCTATGTCGGCAATGGACT TGTTGGGAGTCCTCTTGAATACTGCCTTTACTTGCCTTGTTGAGACAGTG GGATTCCTTCCAGCCCCAGGGGAATGTTTGAGATCACCCTCAGTCTCCAA GCACTTGGAAACGTTGTAAATTGTCTTCAATGAGACCCCAACCTGTTCCT TAATGTTGTTATGAGGCACTCCTGCTCGGAGGAGGGCTGCAATTTCGATC CTCTTTGTTTCCTGATTGGACATGGTCTTNGGACATGGTCTTACGTGTGG AAGTTGTTACGCTCTCACAGGAAGGACTTTTGTTTATTTTAACAGTAAAA ATACGAAACAATCAGATTGGTTGCCACAAAACCTCTTAAAAAGTATTTTT ACATCATCGGTAAATAATTTTGCACGGGCCGGTATATGTTCGTTTCTCAT AAATTAAAAAATAACTTTAGAAAATTTTAAAGCCTGTTCAGATTGCCAAC CAAGAAATTCGCTCCCCCTTTCTACGACATATTTTGTACACCTTTAACAA TAGCTCGCAGTACTTTACTTTATTAATGTCTAAATAATTTTTTCTAGCTA CTCTTCCGTTGAAAATGCCGATTTTCAGCTATGGAGACTACTCTTCTTCT TCTCCGGACCAAAATGAGGCACCTGTCCAAGGAAAGCGTGTACTCACTCA TTGGAAGACAATGCTCGTTTTTGTATTTATATTTTATGTTCTATCCTGTG GAATTGAACGGATTTTTCAACCCATGGTAAGTTGACATCATTAATATTTT GGTATATGTGTGGTTGAAAATCGTTAGGATTTTCGGTATGTAAAAGAAAA AGCCTTAAATTAGGAAGGTAACTTGACAACTTGAATAATGCTTTAGAGGA AAATAGGAGGTGACTTTAATTTTGTGTTGACCTTTTATTTGGAAAAATGT ATTCACATTCAAATACAGTGCATTTAAAAAAAAAACCGTTAAAACAAACC TGTTTATGAAAATAAATTTGCAATTTCTTGAAACCCCTAAGACATGTACA TACTTCATTTCGAATAGCTAAATAGAATAGCTAAACATGCTCCCCGGCGT CTGATCCCCACAACGCTAGTACCAAAACGTTGAAAATGCAAATTATGGCA TAGGGACTTATTGTTTTCCCTTTTGATCCGGATAAATTTAATTTTGGTTT ATTAACTTATTCAAAATGGAATTATATGTTCTGACCAAATAGTATTTAGC TGAAATTTTAGTCGACACGAGAAAGCAGTCTGTAAGATAGTAATAATTGC ACCATTCTTGGCACATTGGGTCTTATCCTGAAAACATAAGGACCCAAAAT GTATTTTTTTCTAATACGTTTCAATTGTAATTCCTTTCCCTAACTCCACA TGTTCCTTCAACTTCCACAAAAGGGCCTTACCCACGTCTTCAACCTTACA TAATGTCCTTAAATTTATGTTCATTGTACAATAGAACTGCAACACATTTT CATTTTAATTTTTGATCGTAACTTAGCTGAGAAAATCTGATTTCAACGTC GAGCACCTCCATAAGACCTCTTCAAATTTAAATTTTTTTTCAAACCTTTT AATATTTAACTTTTCCCCGTTCTCCAAGGTCCAAAATCAAAATGTCTAGT ATATTTAGTTTCTATGGACCTTGGAAAACGGTAAAAAGTTAAATATTAAA AGGTTTGAAAAAAAAGTTAACATTTGAACAGGTGTAACCTCCATAGAAGT CGTTGTTATTTTTTTTATTTTTTTATCAAACGAGACATTAACATTTTATT CAACATAACCTATCATAAATTTATTTTAAACGTACAAAGAAAAAAATACA TTTAAGGGCCTACTGTTCATTCCCGATCCCATGAATGTGAAATTTGTAGC ATCTGACAGCTTTTACTACGATTAAAGTTTCAGCTGGATAGATTCTAGTA TATGGTGAGAGAATACAATTAAATTTTGAATAGCCTCATATACAAAATCC ACTTTAACATTATCTGAAGGATCCTAACTAATTAATATCATTGGAAATAT CTATTTAATGAAAAGAAAAGTGCCTTGAGCAAATATTTTTTCCGTAGGTC CAATTACGGTACAACCTCCTAAAAACAAACACTGCTCTTGAACTATTGGA AAATTCATTACTTAATAGTAAACAATATGTTTACAGCTAAACATGGCCTA ATTTTACCCTACCGATCATCGTTCAGAGTACTAATTATAAGATGACTTTT GGTAAATATGTCCTGCAACACATACGACATTTTTTCAATTTTGCAATCTG AGCGGTGTTTTATATTTTCCAGTCATTATTCCTTTATTCTTGAGGAGGGA ACATCTAACTATAAAGTATTCAGAAGTGCATTAAAGTCGAAGAGTAAGAA AGAGTATTTGTTGTGAAGTAATATGTGTAAGTCCTTGTTGGGCTCGGAGT AGAAAAGAGGATTACACATCAGAGAATTCCTACTTATGTGTCTATATATA ATACCGAGTCGATTTTTTTTCTGTAGCTACATTTAATTAAACTAATAAAA AAGGATGAATATGTCTACTTTTCAATGAAGGAATTATTATTTTTATTTTC ATGGGGGTTATAAGGGTATGTTCTTGTTGGACTCAGTCTATAATTGAGGA TTGACTTTGGAATAATACCTGTATATTTCCTTGCTAGATATGGAAAAGGA TCTATACAAATTTATTTCCATTCATTACATACTGGTAGTCAATATTCCTT ATAACAAGGGAACTTTCACCTTTCTTAATTAAAAGCTTATTTGTAAATAA TATCTATAATGAAGAAGGAGAATTTAATGTAGCCATGTCCTGGATATTGA ACAAAATATTTGTCAGAAAAGTTCCAGTAATCTGATTCAGCTCTTTCATC TTAAAACTTCATTTACCAGTCTTACAAATCAATAATCCAATTATCTAAAT TTATCTATCAGAGTGTTATGGAGTAGTATTTTCCATTTTTTTACACCGAT TACATCGATTCCATAATTTTGTGACCCTGTCCTGTCCTCTTACTTTAATA TTTGGTACTTTTTCAAAGACCGATAACTTGAGGCATGTTAAGCTCCATAT TAAGTCTCCGTCATTTCTTAAATTGTCAGGTTTCATTAGCAAACCGACAA GTTATCCTTTCTACAACTCTATTAATAGGGAGAGGGGTTGTGAGCACATG AAAATGATCAAATTACATTTTAGGCAAACTTTTTAGATGTCAAATGATAT TTTAAGAACAAATGATAAAAATTAACACCTAACTTCTATCCCCAAAATTA CTTTTTGACCCATGAATGCGTATTTTTTAATCTATTTTCTAAGTAATAAG TAGAATCTCGGAAATGACGTGATTATTAAAGACTTTTTATGCATACAACA ATATTTATATAACCATTTTAAGTTTTTAAAGTAGAGTGTTGAGGTAATAT AAAAGGTCAACTTCCTCCAAATTTTTATTTTAGCGTTTTTACTAGGGTGT AAAATTTATAGAATGACCTGTTAATTCGATCTTTTGTTGCATTTTAAAGA AAAATATATGTTTGTAAAGTTCTAGTCTTCAAAGGATGTTTTTTAACCTT TATAGCCATTTGAAAATGATATTTTTTAACGACATTCTCTATTTGTAAAG GGATTGAGAAGTCTAAATTTTAAAGTTATGCTGCTTAATTTCAAGACTTT CAATTTTAAAGTTATGTTGTTGAGTTTCAAAAGAGTTTGAATAAAGTTCC TTTTCTCAAGTGGTACATACTAATATAATCTTTATTTTTCATTTTGAAGA AAAACAAATTATAGCCCAACAAAATACTTAGGATAATCAAAGGATTCGAA CCACTGTACCTTGAGTGGACAGAAATATAAAAACTATTTTTTCATGATTG CTTAAAATATGCTCTAGCATCTGAAAAGTTGGGCTAAAATTGAATTTGAT TGTCACAGAGCCCCCCCCCCCCCTCCACAAATAAGAGGAAKGAGTTCTAG AAAAATCGACAGCTGATATTAAAATACATTTTAAATTTTAATGTCAGAGG GATAAATAATATATTAAAGGTCGAGTAATACATTAAGGCTGTTCAATGTT TATAACTACCAATGGTATAAAACTTTTAGAGTAAAGTTTGTTTTCCTCTC TAAATTAATTTTCTTGCCATCGGGATACTGTTATTATTACCATATAGGTA ACTACTTATATGGTTTGGATGCATAAATTTATATATTTTACATACCAATA CGTACCTCAAATGAGAAAACTATGCAAATTTTCAAGAAACTGTACAATAC ATCCTATATATTGAATATCCACCTGGTTATTAGTTTTGAGACTTAGTCCA ACTGAATTTATATCTGGTTCAGTCTTAATCCTTCTTTTCAACACCGTTAT TTCAGTTCAACTCGGGATCTTGGACTAAAATGTAATCGTTTTCTAATCGT GCCCCGTTTTTTTTTCTCAATACACAAAGTGGGAACTTCAAACATAGAGT AGGACGACACCATTTTGAAAAATGTGATTTTGATATAATCTAGAAAATAC AACTTTAAGCCAATTTGTGATATATGTAAATACTACATATATTCAGTTAT TTTATTAATTAAATATATCTTCCTTTAGTAGCAATAAAAGCATAGACAAG CCGGTAAACACAATGACAGCTCTTGATGATGAAAGAAGTGCTCTTAGCGG ACACTGCTGTCATTATGGCAACTTGAAGCGAATCCAAGTTTAGATTTGAT GTGTGACAGACGTTCTTCTATAATGTACTTTAGACTGAACAGTCTAGAAG GTTAAGGTCGGGGTTAAAAAAAGGAAAGTGGAGGTAGTCTAGAAGTTATC AGCCATAATGTTCCTACTAGAGTTTTGATTCTTCTTCACTGAATGGGGCT GTAATTGACTTATTGATATTGTAGGGAGTCCAAACTGAGATGCATACGGT CTTTGTAGCCTTTTCGGCACTAACATGGAAGATCAGATCATAAGAGTTTG CACACATGTTCCAGTTTTTTACATTGAGGCATGCAATAAAAACAATACTT GTTTATTTTTGTTTCAACCCTGGATTGATAGCGTAACAAAAACTCATAAT TAAAAATAACATGTATAAAAGTTTTATCAAATGCTGTTACAGCTTTGGGT CCCACTCTGTATAGACCGATCTTTACGGATCTTAATCTATGAACTGATAT TTTCCCTTATCCTCATAAATGAGTTGTACAAATATGATTTATGCTAGACT TGTAACTTTGTATGACTTTATTTTTGCCTGAATACCAACTTTAAAATACA AATAATCATATTAAAAATTCTTATAAATGTTTTAAAATCGAATCGGGGCA TTTTTCAAAAATATTTAAATTGTCACTGAGAACACATTTTTCGGCGGATT ACCTTGAAAATTAGCTTTAATTGTACATATCAATGTTGAAAAAGAGCTTA TTTAATGTATCCACCTCCATCATCAATCACAACCTGGATCTGGACCGAGT AGTAGGCTTCTACAAGGTAGTTCCTTTGTTGGGCATTGTCTCTTGGATGG ACACATTCCTTTGATGGCATGAAATGTTCGATTTGCTGTAGATTATACGA AGCTCCGGCAAAATTATTGTTCAGATTAAAATCTATAATTCTGCCGGGCA ATATTTCCGTCCCAAAAAAAGGCATAGCATTGTTCACTCAGCCACTTCAG GGACCTGTCTGAAAAATGACAATTTATTGAGTCTTGTTGCCAGAACCCAA CGTCAAACTCCCGGGTCATATTTGAGACTTCCCTATTTGAATTTTCCGAA TTATTGTGAACAAAAACATCGTCACCCTGCTACACCGTTCTTCCTATATA AATTCAATCTAGGGCAGCTGTTCCCATGATGCCCAAAACTTCACAACAGC TTTTGACAACAAAGTATAACTGTTTTTTGTTTTTTTTAAAGAGCGGTCCA GATCTATTTTTTAATAGTTTGGTACACTAAAAGTATAACGATCTCAGACA AATCCAGGATTTTCAGACCCARGCAACACACTGATACTTTTTTKGGTATG TACCTACACATAAATTGTATATTGGCAGAAATTGTTCAAACTGTMTAAAT GAACATTATTCACAATATATACCNAACAAAAATTTGTTGACAAAAAAAGA TTATTTAAAAAATATTAGAGATATGCAGAATTGTGTAAAAAACCATTATG CTCATTTTTATGAGTTTTGTTTATTCGTATCTAAATTTGTATTGTATTTG ATAAAACTAACTTTCAAAGACAATGAGAATACTTTCCAAATGTTTAAGTG GCTGMCTTTTCACCAATCTTATGGATTTTCTATTGGAAATCATTCAGAAT AAAAATATAAAAGGGAGATTGAATATGCTCGTACTTTGTAAATATATTAG TATTTATTCAAAAGAGGAAGTTGGGAAAATGGTACTCTTGACATTTTGAA CGTAGTGGAACGACATTTTTACTAATTTTTAGACATACTTTTCTCTTTAA TGTGTCTTCAATTGTTCAGAGAGAGCTACACTCATAAGGTATAAGTTAAC ATTATGCTATTACATTTGACATAGGAATCCTCTTTCAATGTCAATATACA CACACTAAGGAATTTTCTTCTCGGGGAACGACCGAGACGAAAATTTATAG ACAATCAGTTTTCTCAAGGACGTTGTCAATTTACTTTTTACATTTACTTT TTTTTAAACGATATATTTTACAAATAACAAGGGGATATTTGCTCAAATTT TGAGACTTTGTTAATTTATTTTTATTTAAAAAATATCATTTTGATATAAG GGAGGCTTAACCAATATTTTCTTGTGTGAACAATAATTAATAAGTATCTT TTGATCAATTTTTTCAGCCTACTTTTTTTTTTACATTAATAATTAATTAT CACGTAATAGTAACATAATTTTCAAATTTAATTTACCTTTCACCAATAAT TCGATTTTCATGTTTTTTGATTATTTTTTGGGTACACATGTCCCCAACTT TTTCATTGTTGGTTTGTTCTTGAGGGGTAAAAATATTATGTTCCAATTTT GAGACATTTAAATACATTTTCCTTTTAAGTTATCAATTCAATAGAAGGAG GTGTTCAAATTTGTAAAAAAATTTAAACTTTCGCTCTTAATGGGTTAAGA ATAAACTGTAATAAATAATTCCGTCTTGAACCAAGTCACAAGGTTAGTCC AATCACTAAAAGTACATGAATTTAAAAATATGAATTCCTCTAAGTGAAGG TTTCACCTAGAGATGCCTTACCTTTGTATATATTGGGCTGCATTGACACT TGAAATATTTCAATGGGACAATATTTACTTTTTCTATAAACTATTTTGCC TCAGGGCATTCTGTCATTAACGTCATCTAGTCTCAATGACATTTCTTCTT CATATATGAATAAATGATATTGATACGTTGTTATTTTTTGGGTAAAACGG ATATTCTTTTTGAAAATTTGAATCAAAATATGTGTCTAAAATGCGCATTA AATGTAATAATTATTAATTGTAATAATTATGGAATCAAGCCCTCAAACTC CAATGCATGCATACATTTAAAATTTCACTATGTAATGAGTTCGAAACAAA TACAAAATAGGTTACAAAATTAATATAATCTTAAAAATAAACAAACACGT CAACGGTTCGAGTAGAAGAATTGAATTACTTCTCTGTTATCCATTAATAT AAGTCTCATGGATTGACAAACAGACAAAATATGAGGCAGGAGTATAATTC CATCTATATTCCAACAGAAAACAAACATTTAATGAGATTTATAGCAATAA ACATTACATTTTTGATTAGAAAATTCAAAGGGAACATTAATTTAGACCAA AATTAATGTCTAACGACGTATATACCAAATTATTTATATTTTAAGGCAAA AGAACCAAGCAACAGATTATACGTGCCTAAAAAGAAATAAATTAGATTAT CTAATATCAAATCAATGATGTATTTGACTTTGTTTTCAAGCCATGATGTT ATCTAGATTTTTATTTCAGAATGTTGTCTTGATTTTGAGAATATTTGCTA AATCTCTGTCGGTCAACCAATTTCTTTCTGCAGTTTTAATGTTCTTAATA CATGAGATGAACAGCTCGGACCAATATGTATTGCCCCATCCCATGCATTA TAATTTTCAAGATAAATTTACATTAACATAACTATTTAAAATCAAAGAAG GGGGTTCCCTCTATGAAAGGTTTTCAAACCTTCACCACTTTTCAGCTCAA TCTGTTTAAGTTATTAATCGCCTTGGCTTTATCACCCACATATCAAAATT TAAATTTTAATCACATTTATAAATAAAATTTGCCTCATGTCATATTTATG TTATAGGCCTTTACATTCGGCATCTGTGGTCCTTTGGCACTCCAACCCGC AGCTGCTATCATCATTGACTCATGTTATAATGGAGGATTCATGTGTGGAC GAATTGTGAGCGTTGGATTAGCGGGAATTATTCGACCACGGAATATGATC TACATTTGCCTATTGTTTGCGTTTGTTGGA
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