EMLSAG00000000442, EMLSAG00000000442-683208 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000000442
Unique Name	EMLSAG00000000442-683208
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000000442 vs. GO
Match: - (symbol:SSR2 "Translocon-associated protein subunit beta" species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR008856 Pfam:PF05753 GO:GO:0005783 GO:GO:0016021 EMBL:AL355388 PANTHER:PTHR12861 HGNC:HGNC:11324 ChiTaRS:SSR2 ProteinModelPortal:E9PQJ7 Ensembl:ENST00000496742 NextBio:35504416 ArrayExpress:E9PQJ7 Bgee:E9PQJ7 Uniprot:E9PQJ7)

HSP 1 Score: 45.4394 bits (106), Expect = 7.878e-6
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 0

Query:    5 LYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQV 70
            L S VVL LF   + + EG        A LL SK + N+Y VEG D+ ++Y IYN+G + A+ V +
Sbjct:    3 LLSFVVLALF-AVTQAEEG--------ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSRLALPVHL 59

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BLAST of EMLSAG00000000442 vs. GO
Match: - (symbol:SSR2 "Translocon-associated protein subunit beta" species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR008856 Pfam:PF05753 GO:GO:0005783 GO:GO:0016021 EMBL:AL355388 PANTHER:PTHR12861 HGNC:HGNC:11324 ChiTaRS:SSR2 Ensembl:ENST00000473699 NextBio:35503875 ArrayExpress:E9PNP2 Bgee:E9PNP2 Uniprot:E9PNP2)

HSP 1 Score: 42.743 bits (99), Expect = 5.914e-5
Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 0

Query:    5 LYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKE 72
            L S VVL LF   + + EG        A LL SK + N+Y VEG D+ ++Y IYN+G +   + ++++
Sbjct:    3 LLSFVVLALF-AVTQAEEG--------ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSRHVHEEKLRQ 61

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BLAST of EMLSAG00000000442 vs. C. finmarchicus
Match: gi|592778023|gb|GAXK01176545.1| (TSA: Calanus finmarchicus comp3365_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 158.688 bits (400), Expect = 8.435e-47
Identity = 75/134 (55.97%), Postives = 98/134 (73.13%), Query Frame = 0

Query:   32 AHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165
            A +LL+KQ+ NKYLVEGMDIVVKY ++N+G+  A +V+V + GF  + FDVVSG   +KL+R+ P SN++HT+VVRPKKFGYF F  AEV      E+   I TG SSDPG GVII+ ++YD+QFSAH+   A 
Sbjct:  361 ARILLAKQIHNKYLVEGMDIVVKYNLFNVGDTAATNVKVVDNGFRVEDFDVVSGQTKYKLERVAPGSNSSHTIVVRPKKFGYFNFTAAEVTYNA--ESSGAILTGLSSDPGQGVIIAARDYDRQFSAHLLDWAA 756

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BLAST of EMLSAG00000000442 vs. C. finmarchicus
Match: gi|592758943|gb|GAXK01195470.1| (TSA: Calanus finmarchicus comp8935159_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 145.976 bits (367), Expect = 1.115e-42
Identity = 75/156 (48.08%), Postives = 103/156 (66.03%), Query Frame = 0

Query:    5 LYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160
            L+ + VL L    S++   +DAS   PA LL SKQ+ NKYLVE MD+++KY+++NIG   A+DVQV +  F  D F+VV G   F +DRIPP ++ TH +V+RP KFGYF F  AEV    S++A +  Q G SS+PG G I+  K YD++FS H+
Sbjct:   50 LFKICVLVL--TVSTTLGSEDAS---PAKLLFSKQILNKYLVEDMDVLIKYSLFNIGGSSALDVQVSDSTFSPDDFEVVGGQMKFSVDRIPPGADATHVVVLRPTKFGYFNFTAAEVSYLPSEDATE-AQIGYSSEPGQGAIVPFKEYDRKFSPHL 499

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BLAST of EMLSAG00000000442 vs. L. salmonis peptides
Match: EMLSAP00000000442 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1068:97826:99509:1 gene:EMLSAG00000000442 transcript:EMLSAT00000000442 description:"augustus_masked-LSalAtl2s1068-processed-gene-1.2")

HSP 1 Score: 335.109 bits (858), Expect = 2.029e-118
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0

Query:    1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTACCF 167
            MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTACCF
Sbjct:    1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTACCF 167

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BLAST of EMLSAG00000000442 vs. L. salmonis peptides
Match: EMLSAP00000004472 (pep:novel supercontig:LSalAtl2s:LSalAtl2s232:350320:360099:1 gene:EMLSAG00000004472 transcript:EMLSAT00000004472 description:"snap_masked-LSalAtl2s232-processed-gene-3.2")

HSP 1 Score: 95.9005 bits (237), Expect = 6.739e-26
Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0

Query:   52 VVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXF 116
            +VKY IYNIGEQPAVD QVKE+  PEDS+D  SG+ SF L  IPP+S NTHTL+V+ KKFG+F F
Sbjct:    1 MVKYGIYNIGEQPAVDAQVKEICSPEDSYDAASGNTSFNLYHIPPYSYNTHTLIVKLKKFGFFSF 65

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BLAST of EMLSAG00000000442 vs. L. salmonis peptides
Match: EMLSAP00000003648 (pep:novel supercontig:LSalAtl2s:LSalAtl2s199:123768:144571:-1 gene:EMLSAG00000003648 transcript:EMLSAT00000003648 description:"snap_masked-LSalAtl2s199-processed-gene-1.3")

HSP 1 Score: 67.0106 bits (162), Expect = 9.165e-15
Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0

Query:   86 HASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQT 135
              SFKLDRI PHS NT TL + PKKF Y  F   +V+ RVSDE DDIIQT
Sbjct:   60 QTSFKLDRILPHSENTLTLFLSPKKFEYLSFTSFKVKYRVSDEVDDIIQT 109

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BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|1174451|sp|P43308.1|SSRB_HUMAN (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor)

HSP 1 Score: 120.553 bits (301), Expect = 8.446e-34
Identity = 64/161 (39.75%), Postives = 94/161 (58.39%), Query Frame = 0

Query:    5 LYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165
            L S VVL LF   + + EG        A LL SK + N+Y VEG D+ ++Y IYN+G   A+DV++ +  FP + F +VSG  + K DRI P SN +HT+V+RP K GYF F  A +     ++   +I  G++S PG G I++ + +D++FS H    A 
Sbjct:    3 LLSFVVLALF-AVTQAEEG--------ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVVI--GSTSAPGQGGILAQREFDRRFSPHFLDWAA 152

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BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|83308967|sp|Q5E9E4.1|SSRB_BOVIN (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor)

HSP 1 Score: 117.472 bits (293), Expect = 1.394e-32
Identity = 64/165 (38.79%), Postives = 96/165 (58.18%), Query Frame = 0

Query:    1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165
            M+L+ ++  VL LF   + + EG        A LL SK + N+Y VEG D+ ++Y IYN+G   A+DV++ +  FP + F +VSG  + K DRI P SN +HT+V+RP K GYF F  A V     ++   +I  G +S PG G I++ + +D++FS H    A 
Sbjct:    1 MRLLAFA--VLALF-AVTQAEEG--------ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPVVI--GFTSAPGQGGILAQREFDRRFSPHFLDWAA 152

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BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|134931|sp|P23438.1|SSRB_CANFA (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Glycoprotein 25H; Short=gp25H; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor)

HSP 1 Score: 117.087 bits (292), Expect = 1.675e-32
Identity = 64/161 (39.75%), Postives = 93/161 (57.76%), Query Frame = 0

Query:    5 LYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165
            L + V+L LF   S + EG        A LL SK + N+Y VEG D+ ++Y IYN+G   A+DV++ +  FP + F +VSG  + K DRI P SN +HT+V+RP K GYF F  A V     ++   +I  G +S PG G I++ + +D++FS H    A 
Sbjct:    3 LLASVLLALF-AVSHAEEG--------ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPVVI--GFTSAPGQGGILAQREFDRRFSPHFLDWAA 152

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BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|71162391|sp|Q9CPW5.1|SSRB_MOUSE (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor)

HSP 1 Score: 116.316 bits (290), Expect = 3.004e-32
Identity = 55/134 (41.04%), Postives = 83/134 (61.94%), Query Frame = 0

Query:   32 AHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165
            A LL SK + N+Y VEG D+ ++Y IYN+G   A+DV++ +  FP + F +VSG  + K DRI P SN +HT+V+RP K GYF F  A +     ++   +I  G++S PG G I++ + +D++FS H    A 
Sbjct:   21 ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVVI--GSTSAPGQGGILAQREFDRRFSPHFLDWAA 152

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BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|74965890|sp|Q22169.1|SSRB_CAEEL (RecName: Full=Translocon-associated protein subunit beta; Flags: Precursor)

HSP 1 Score: 95.1301 bits (235), Expect = 5.710e-24
Identity = 47/132 (35.61%), Postives = 77/132 (58.33%), Query Frame = 0

Query:   27 SGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEV-GFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFS 157
            + ++ A +L  KQ  + Y VE MD V++Y +YN+G++PA  V + +   FP +SFD+V G      ++IP  SN TH++V+RP+ FG+F +  A+V     +E   +  T     PG G I   + YD++F+
Sbjct:   20 TQTRDAFILAHKQPLSTYAVENMDFVLEYGLYNVGDKPAQKVTIDDRHSFPTNSFDIVKGLLFVHFEQIPAGSNVTHSVVIRPRAFGFFNYTAAQVTYYTDNENHHVTLTNT---PGEGYIYRQREYDRRFA 148

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BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|182691581|sp|Q54VI6.2|SSRB_DICDI (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor)

HSP 1 Score: 55.8398 bits (133), Expect = 5.934e-9
Identity = 37/136 (27.21%), Postives = 66/136 (48.53%), Query Frame = 0

Query:   32 AHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTACCF 167
            A LL  K++    +V G ++ +++ IYN+G +PA D+   +  F    F+ VSG +  K + + P+S     L V PKK G +      +  R +  + +   + A+S  G   + S  +Y+K+ S  I +    F
Sbjct:   24 AELLFHKKIVEGPVV-GKELPIQFIIYNVGSEPAYDISFIDNDFSNAEFEFVSGSSEGKWETLAPNSQVQTNLTVIPKKSGIYSLTSTVLNYRKTQTSSEFTVSSAASYSGM-YVESQADYEKRTSLLIKEWITFF 157

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BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: XP_623954.1 (PREDICTED: translocon-associated protein subunit beta [Apis mellifera])

HSP 1 Score: 150.214 bits (378), Expect = 1.292e-45
Identity = 73/162 (45.06%), Postives = 107/162 (66.05%), Query Frame = 0

Query:    4 ILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165
            I+++ +   +FT Y+   E         A LL+SKQ+ NKYLVE MDIV+KY +YNIG   A++V++ +  F  D F  VSG  + ++DR+PP++N +HT++VRP+KFGYF F  AEV  R  ++A   +Q  ASS+PG  VI+S ++YDKQFS+H+   A 
Sbjct:    5 IIFAALAAFVFTTYAEEEEET-------ARLLISKQLLNKYLVENMDIVIKYTVYNIGSAAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVIVRPRKFGYFNFTSAEVLYRRKEDAPS-LQFAASSEPGEAVIVSFRDYDKQFSSHVVDWAA 158

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BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: EFX79793.1 (hypothetical protein DAPPUDRAFT_230994 [Daphnia pulex])

HSP 1 Score: 142.124 bits (357), Expect = 1.603e-42
Identity = 70/148 (47.30%), Postives = 95/148 (64.19%), Query Frame = 0

Query:   13 LFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160
            L   ++ +T G + +   PA LL SKQ+ NKYLVEGMDIV+KY+++N+G   A+DVQV +  F    F+VV G     +DRI P SN TH +V+RP KFGYF F  AEV    S+ A + +  G SS+PG G I+  K YD++FS H+
Sbjct:    9 LLVVFAVATTGNEEA--TPAKLLFSKQILNKYLVEGMDIVIKYSLFNVGGTAALDVQVADNTFGPQDFEVVGGQLKVTIDRIAPGSNATHVVVIRPSKFGYFNFTAAEVTYLPSENAAEAL-VGLSSEPGQGAIVPFKEYDRKFSPHL 153

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BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: EEB15815.1 (translocon-associated protein subunit beta precursor, putative [Pediculus humanus corporis])

HSP 1 Score: 139.813 bits (351), Expect = 1.062e-41
Identity = 66/151 (43.71%), Postives = 100/151 (66.23%), Query Frame = 0

Query:   10 VLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160
            +L L  G SS  +      S  A LL+SKQ+ NKYLVE MDI++KY +YN+G+  A++V + +  F  +SF ++ G  S K+DRIPP +N TH  V+R  K+GY+ F  AEV  +VS+E    +Q   +S+PG G+I++ ++YDK+FS+H+
Sbjct:    4 ILLLILGISSIVKCSSEDDSSGARLLVSKQILNKYLVEDMDILLKYTLYNVGKNAAINVVLSDQSFHPESFVLMGGQLSVKIDRIPPGTNATHVAVIRSTKYGYYNFTAAEVSYKVSEEGA--LQYAVTSEPGEGLIVAFRDYDKKFSSHV 152

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BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: gb|EFA10929.1| (Translocon-associated protein subunit beta-like Protein [Tribolium castaneum])

HSP 1 Score: 134.806 bits (338), Expect = 1.113e-39
Identity = 63/129 (48.84%), Postives = 90/129 (69.77%), Query Frame = 0

Query:   33 HLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIY 161
             LL+SKQ+ N+YLVE  DI VKY +YN+G   AV VQ+ + GF  ++F+VV GH S K +RI P +N +H +VVRPK++GYF F  AE   + SD +  ++Q   SS+PG G II+ ++YDK+FS+H +
Sbjct:   26 RLLVSKQILNRYLVENKDIEVKYTLYNVGTSAAVGVQLVDNGFHPEAFEVVGGHLSAKFERILPQTNVSHVVVVRPKRYGYFNFTSAEATYKNSDAS--VVQVSLSSEPGEGGIIAFRDYDKKFSSHTW 152

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BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: AAF49532.2 (signal sequence receptor beta [Drosophila melanogaster])

HSP 1 Score: 132.494 bits (332), Expect = 1.019e-38
Identity = 62/130 (47.69%), Postives = 89/130 (68.46%), Query Frame = 0

Query:   32 AHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIY 161
            A LL+SKQ+ NKYLVE  D++V+Y I+N+G   A  V++ + GF  ++FDVV G  +  +DRI P +N TH LVVRPK FGYF F  AEV  +  +E++  +Q   SS+PG G I++L  Y+K+FS+H +
Sbjct:   26 ARLLVSKQILNKYLVEKSDLLVRYTIFNVGSGAATKVRLVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYFNFTAAEVSYKAVEESET-LQLAVSSEPGEGGIVNLNEYNKRFSSHFF 154

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BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: gb|EEC17421.1| (signal sequence receptor beta [Ixodes scapularis])

HSP 1 Score: 130.954 bits (328), Expect = 3.688e-38
Identity = 64/129 (49.61%), Postives = 91/129 (70.54%), Query Frame = 0

Query:   32 AHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160
            A LL+ K++ N+YLVEG DI+V Y IYN+G   A+DV+V +  F E  F+VVSG   FKLDR+PP SN THT VVR  K+G F F  AEV  R S+++ + +Q   +++PG G II++K++D++FS H+
Sbjct:   26 ARLLVQKRILNRYLVEGRDIIVDYNIYNVGGSAALDVKVVDNSFGEGDFEVVSGLLKFKLDRLPPGSNVTHTAVVRAIKYGRFNFTSAEVTYRSSEDSKE-LQFAHTAEPGEGGIIAVKDFDRKFSPHV 153

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BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: EDO63746.1 (AGAP005861-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 127.872 bits (320), Expect = 6.020e-37
Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = 0

Query:   26 ASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAH 159
            A+    A LL+SK + NKYLVE  DIVVKY +YN+G  PAV+V++ + GF  + F+VV G  +  +DRI P +N TH +VVRPK++GY  F  AEV    +++A +  Q   SS+PG G I++   ++KQFS+H
Sbjct:   20 ANEENTARLLVSKHILNKYLVEARDIVVKYTLYNVGSGPAVNVRLVDNGFHPEVFEVVGGQLTASIDRIAPQTNVTHIVVVRPKQYGYLNFTAAEVNYLATEDATE-PQFSISSEPGEGAIVAEAQFNKQFSSH 152

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BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: EAL39950.2 (AGAP005861-PB [Anopheles gambiae str. PEST])

HSP 1 Score: 127.872 bits (320), Expect = 6.020e-37
Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = 0

Query:   26 ASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAH 159
            A+    A LL+SK + NKYLVE  DIVVKY +YN+G  PAV+V++ + GF  + F+VV G  +  +DRI P +N TH +VVRPK++GY  F  AEV    +++A +  Q   SS+PG G I++   ++KQFS+H
Sbjct:   20 ANEENTARLLVSKHILNKYLVEARDIVVKYTLYNVGSGPAVNVRLVDNGFHPEVFEVVGGQLTASIDRIAPQTNVTHIVVVRPKQYGYLNFTAAEVNYLATEDATE-PQFSISSEPGEGAIVAEAQFNKQFSSH 152

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BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: gb|KPM06334.1| (translocon-associated protein subunit beta-like protein [Sarcoptes scabiei])

HSP 1 Score: 127.487 bits (319), Expect = 1.025e-36
Identity = 61/139 (43.88%), Postives = 89/139 (64.03%), Query Frame = 0

Query:   29 SKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKK--FGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165
            S  A +L  KQV NKYLVE  DIV+ Y ++N+G   A++VQ+ +  F    FDV+SG A F + RI PH+N T+T+V+RPK+  +G F F   E+     D  ++ +++G +S+PG G I+SLK +DK+FS H Y  A 
Sbjct:   29 SSKARILAEKQVLNKYLVESKDIVINYNLFNVGSSSAINVQISDATFSLAHFDVISGSAKFTIPRIAPHTNTTNTVVIRPKEGVWGRFNFTAGELTYYSED--NNELKSGFTSEPGEGFIVSLKEFDKRFSPHYYDWAT 165

[Close]

BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: gb|KFM56656.1| (Translocon-associated protein subunit beta, partial [Stegodyphus mimosarum])

HSP 1 Score: 65.0846 bits (157), Expect = 1.788e-13
Identity = 30/76 (39.47%), Postives = 50/76 (65.79%), Query Frame = 0

Query:   90 KLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165
            KLDR+ P +N +HT+V+RPK+ G + F  AEV    S+++ + +Q   S++PG  V+I  K++D++FS H+   A 
Sbjct:    2 KLDRLGPGANISHTVVLRPKQTGIYNFTAAEVTYYPSEDSKE-VQVSFSTEPGEAVVIQAKDFDRKFSPHMTDWAA 76

[Close]

BLAST of EMLSAG00000000442 vs. nr
Match: gi|290562754|gb|ADD38772.1| (Translocon-associated protein subunit beta [Lepeophtheirus salmonis])

HSP 1 Score: 318.546 bits (815), Expect = 2.467e-109
Identity = 156/160 (97.50%), Postives = 156/160 (97.50%), Query Frame = 0

Query:    1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160
            MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYF F  AEVQ RVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI
Sbjct:    1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFNFTSAEVQYRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160

[Close]

BLAST of EMLSAG00000000442 vs. nr
Match: gi|225712622|gb|ACO12157.1| (Translocon-associated protein subunit beta precursor [Lepeophtheirus salmonis] >gi|225714650|gb|ACO13171.1| Translocon-associated protein subunit beta precursor [Lepeophtheirus salmonis])

HSP 1 Score: 317.39 bits (812), Expect = 8.334e-109
Identity = 155/160 (96.88%), Postives = 156/160 (97.50%), Query Frame = 0

Query:    1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160
            MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYF F  AEV+ RVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI
Sbjct:    1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFNFTSAEVKYRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160

[Close]

BLAST of EMLSAG00000000442 vs. nr
Match: gi|225712054|gb|ACO11873.1| (Translocon-associated protein subunit beta precursor [Lepeophtheirus salmonis])

HSP 1 Score: 313.538 bits (802), Expect = 2.312e-107
Identity = 154/160 (96.25%), Postives = 155/160 (96.88%), Query Frame = 0

Query:    1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160
            MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYF F  AEV+ RVSDEADDIIQTGASSD GHGVIISLKNYDKQFSAHI
Sbjct:    1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFNFTSAEVKYRVSDEADDIIQTGASSDLGHGVIISLKNYDKQFSAHI 160

[Close]

BLAST of EMLSAG00000000442 vs. nr
Match: gi|225719752|gb|ACO15722.1| (Translocon-associated protein subunit beta precursor [Caligus clemensi])

HSP 1 Score: 261.922 bits (668), Expect = 7.293e-87
Identity = 127/161 (78.88%), Postives = 143/161 (88.82%), Query Frame = 0

Query:    1 MKLILYSMVVLGLFTGYSSSTEGKD-ASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160
            M+++L S+VVLGLFT  S   EG D +S SK AHLLLSKQVQNKYLVEGMDIV+KY IYN+G+ PAVDV VKEVGFPEDSFD+VSGHASFKLDR+PPHSNNTHTLVVRPKKFGYF F  AE++ RVS+EADD++Q G+SSDPGHGVIISLKNYDKQFSAHI
Sbjct:    1 MQVLLCSLVVLGLFTCTSVYGEGSDPSSSSKVAHLLLSKQVQNKYLVEGMDIVIKYGIYNVGDLPAVDVSVKEVGFPEDSFDLVSGHASFKLDRVPPHSNNTHTLVVRPKKFGYFNFTSAEIKYRVSEEADDVVQIGSSSDPGHGVIISLKNYDKQFSAHI 161

[Close]

BLAST of EMLSAG00000000442 vs. nr
Match: gi|225708928|gb|ACO10310.1| (Translocon-associated protein subunit beta precursor [Caligus rogercresseyi])

HSP 1 Score: 243.817 bits (621), Expect = 1.050e-79
Identity = 125/161 (77.64%), Postives = 134/161 (83.23%), Query Frame = 0

Query:    1 MKLILYSMVVLGLFTGYSSSTEGKDAS-GSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160
            M+ +L S+ VLGLF   SSS    D S  SK A LLLSKQVQNKYLVEGMDIVVKY IYNIG+ PAVDV V E+GFP+DSFDVVSG  SFKLDRIPPHSNNTHTLVVRPKKFGYF F  AEV+ RVS+EADDI+Q G SSDPGHGVIISLKNYDKQFSAHI
Sbjct:    1 MQFLLCSLAVLGLFVSSSSSEGSVDPSPNSKVAQLLLSKQVQNKYLVEGMDIVVKYGIYNIGDLPAVDVSVSEMGFPDDSFDVVSGQTSFKLDRIPPHSNNTHTLVVRPKKFGYFSFTSAEVKYRVSEEADDIVQVGLSSDPGHGVIISLKNYDKQFSAHI 161

[Close]

BLAST of EMLSAG00000000442 vs. nr
Match: gi|225710348|gb|ACO11020.1| (Translocon-associated protein subunit beta precursor [Caligus rogercresseyi])

HSP 1 Score: 241.506 bits (615), Expect = 6.756e-79
Identity = 124/161 (77.02%), Postives = 133/161 (82.61%), Query Frame = 0

Query:    1 MKLILYSMVVLGLFTGYSSSTEGKDAS-GSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160
            M+L+L S+ VLGLF   SSS    D S  SK A LLLSKQVQNKYLVEGMDIVVKY IYNIG+ PAVDV V E+GFP+DSFDV SG  SFKLDRIPPHSNNTH LVVRPKKFGYF F  AEV+ RVS+EADDI+Q G SSDPGHGVIISLKNYDKQFSAHI
Sbjct:    1 MQLLLCSLAVLGLFVSSSSSEGSVDPSPNSKVAQLLLSKQVQNKYLVEGMDIVVKYGIYNIGDLPAVDVSVSEMGFPDDSFDVASGQTSFKLDRIPPHSNNTHALVVRPKKFGYFNFTSAEVKYRVSEEADDIVQVGLSSDPGHGVIISLKNYDKQFSAHI 161

[Close]

BLAST of EMLSAG00000000442 vs. nr
Match: gi|225711116|gb|ACO11404.1| (Translocon-associated protein subunit beta precursor [Caligus rogercresseyi])

HSP 1 Score: 174.096 bits (440), Expect = 2.160e-52
Identity = 90/117 (76.92%), Postives = 96/117 (82.05%), Query Frame = 0

Query:    1 MKLILYSMVVLGLFTGYSSSTEGKDAS-GSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXF 116
            M+L+L S+ VLGLF   SSS    D S  SK A LLLSKQVQNKYLVEGMDIVVKY IYNIG+ PAVDV V E+GFP+DSFDVVSG  SFKLDRIPPHSNNTHTLVVRPKKFGYF F
Sbjct:    1 MQLLLCSLAVLGLFVSSSSSEGSVDPSPNSKVAQLLLSKQVQNKYLVEGMDIVVKYGIYNIGDLPAVDVSVSEMGFPDDSFDVVSGQTSFKLDRIPPHSNNTHTLVVRPKKFGYFNF 117

[Close]

BLAST of EMLSAG00000000442 vs. nr
Match: gi|820854569|ref|XP_012344584.1| (PREDICTED: translocon-associated protein subunit beta [Apis florea] >gi|820854571|ref|XP_012344585.1| PREDICTED: translocon-associated protein subunit beta [Apis florea])

HSP 1 Score: 150.984 bits (380), Expect = 3.254e-43
Identity = 74/163 (45.40%), Postives = 107/163 (65.64%), Query Frame = 0

Query:    3 LILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165
             I+++ +   +FT Y+   E         A LL+SKQ+ NKYLVE MDIV+KY +YNIG   A++V++ +  F  D F  VSG  + ++DR+PP++N +HT+VVRP+KFGYF F  AEV  R  ++A   +Q  ASS+PG  VI+S ++YDKQFS+H+   A 
Sbjct:    4 FIIFAALAAFVFTTYAEEEEET-------ARLLISKQLLNKYLVENMDIVIKYTVYNIGSAAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVVVRPRKFGYFNFTSAEVLYRRKEDAPS-LQFAASSEPGEAVIVSFRDYDKQFSSHVVDWAA 158

[Close]

BLAST of EMLSAG00000000442 vs. nr
Match: gi|1059236859|ref|XP_017763274.1| (PREDICTED: translocon-associated protein subunit beta [Eufriesea mexicana] >gi|1026557342|gb|OAD53089.1| Translocon-associated protein subunit beta [Eufriesea mexicana])

HSP 1 Score: 150.599 bits (379), Expect = 3.749e-43
Identity = 75/162 (46.30%), Postives = 107/162 (66.05%), Query Frame = 0

Query:    4 ILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165
            I+++ +   LFT Y+   E         A LL+SKQ+ NKYLVE MDIV+KY +YNIG   A++V++ +  F  D F  VSG  + ++DR+PP++N +HT+VVRP+KFGYF F  AEV  R  ++A   +Q  ASS+PG  VI+S ++YDKQFS+H+   A 
Sbjct:    5 IIFAAIAAFLFTAYAEEEEEV-------ARLLVSKQLLNKYLVENMDIVIKYTVYNIGSAAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVVVRPRKFGYFNFTSAEVLYRHKEDAPS-LQFAASSEPGETVIVSFRDYDKQFSSHVIDWAA 158

[Close]

BLAST of EMLSAG00000000442 vs. nr
Match: gi|1035621792|ref|XP_016918833.1| (PREDICTED: translocon-associated protein subunit beta [Apis cerana])

HSP 1 Score: 150.599 bits (379), Expect = 4.180e-43
Identity = 74/162 (45.68%), Postives = 107/162 (66.05%), Query Frame = 0

Query:    4 ILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165
            I+++ +   +FT Y+   E         A LL+SKQ+ NKYLVE MDIV+KY +YNIG   A++V++ +  F  D F  VSG  + ++DR+PP++N +HT+VVRP+KFGYF F  AEV  R  ++A   +Q  ASS+PG  VI+S ++YDKQFS+H+   A 
Sbjct:    5 IIFAALAAFVFTTYAEEEEET-------ARLLISKQLLNKYLVENMDIVIKYTVYNIGSAAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVVVRPRKFGYFNFTSAEVLYRRKEDAPS-LQFAASSEPGEAVIVSFRDYDKQFSSHVVDWAA 158

[Close]

BLAST of EMLSAG00000000442 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold91_size383040-snap-gene-1.29 (protein:Tk03177 transcript:maker-scaffold91_size383040-snap-gene-1.29-mRNA-1 annotation:"translocon-associated protein subunit beta precursor")

HSP 1 Score: 153.295 bits (386), Expect = 8.089e-48
Identity = 70/128 (54.69%), Postives = 96/128 (75.00%), Query Frame = 0

Query:   33 HLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160
             LL+ KQ+QN++LVEG DIVVKY++YN+G+  A++V + E GF    FD+V G  S +LDR+   +N++H LVVRPK+FGYF F  AEVQ R S+E +  IQ G SSDPG  +II+L++YDKQFS+H+
Sbjct:   40 RLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQ-IQIGHSSDPGQALIIALRDYDKQFSSHM 166

The following BLAST results are available for this feature:

BLAST of EMLSAG00000000442 vs. GO
BLAST of EMLSAG00000000442 vs. C. finmarchicus
BLAST of EMLSAG00000000442 vs. L. salmonis peptides
BLAST of EMLSAG00000000442 vs. SwissProt
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
BLAST of EMLSAG00000000442 vs. nr
BLAST of EMLSAG00000000442 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000000442 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 22


Match Name	E-value	Identity	Description
-	7.878e-6	40.91	symbol:SSR2 "Translocon-associated protein subunit...	[more]
-	5.914e-5	36.76	symbol:SSR2 "Translocon-associated protein subunit...	[more]

Pages

BLAST of EMLSAG00000000442 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 2


Match Name	E-value	Identity	Description
gi\|592778023\|gb\|GAXK01176545.1\|	8.435e-47	55.97	TSA: Calanus finmarchicus comp3365_c2_seq1 transcr...	[more]
gi\|592758943\|gb\|GAXK01195470.1\|	1.115e-42	48.08	TSA: Calanus finmarchicus comp8935159_c0_seq1 tran...	[more]

BLAST of EMLSAG00000000442 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3


Match Name	E-value	Identity	Description
EMLSAP00000000442	2.029e-118	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1068:9782...	[more]
EMLSAP00000004472	6.739e-26	67.69	pep:novel supercontig:LSalAtl2s:LSalAtl2s232:35032...	[more]
EMLSAP00000003648	9.165e-15	64.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s199:12376...	[more]

BLAST of EMLSAG00000000442 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 6


Match Name	E-value	Identity	Description
gi\|1174451\|sp\|P43308.1\|SSRB_HUMAN	8.446e-34	39.75	RecName: Full=Translocon-associated protein subuni...	[more]
gi\|83308967\|sp\|Q5E9E4.1\|SSRB_BOVIN	1.394e-32	38.79	RecName: Full=Translocon-associated protein subuni...	[more]
gi\|134931\|sp\|P23438.1\|SSRB_CANFA	1.675e-32	39.75	RecName: Full=Translocon-associated protein subuni...	[more]
gi\|71162391\|sp\|Q9CPW5.1\|SSRB_MOUSE	3.004e-32	41.04	RecName: Full=Translocon-associated protein subuni...	[more]
gi\|74965890\|sp\|Q22169.1\|SSRB_CAEEL	5.710e-24	35.61	RecName: Full=Translocon-associated protein subuni...	[more]
gi\|182691581\|sp\|Q54VI6.2\|SSRB_DICDI	5.934e-9	27.21	RecName: Full=Translocon-associated protein subuni...	[more]

BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 10


Match Name	E-value	Identity	Description
XP_623954.1	1.292e-45	45.06	PREDICTED: translocon-associated protein subunit b...	[more]
EFX79793.1	1.603e-42	47.30	hypothetical protein DAPPUDRAFT_230994 [Daphnia pu...	[more]
EEB15815.1	1.062e-41	43.71	translocon-associated protein subunit beta precurs...	[more]
gb\|EFA10929.1\|	1.113e-39	48.84	Translocon-associated protein subunit beta-like Pr...	[more]
AAF49532.2	1.019e-38	47.69	signal sequence receptor beta [Drosophila melanoga...	[more]
gb\|EEC17421.1\|	3.688e-38	49.61	signal sequence receptor beta [Ixodes scapularis]	[more]
EDO63746.1	6.020e-37	46.27	AGAP005861-PA [Anopheles gambiae str. PEST]	[more]
EAL39950.2	6.020e-37	46.27	AGAP005861-PB [Anopheles gambiae str. PEST]	[more]
gb\|KPM06334.1\|	1.025e-36	43.88	translocon-associated protein subunit beta-like pr...	[more]
gb\|KFM56656.1\|	1.788e-13	39.47	Translocon-associated protein subunit beta, partia...	[more]

BLAST of EMLSAG00000000442 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|290562754\|gb\|ADD38772.1\|	2.467e-109	97.50	Translocon-associated protein subunit beta [Lepeop...	[more]
gi\|225712622\|gb\|ACO12157.1\|	8.334e-109	96.88	Translocon-associated protein subunit beta precurs...	[more]
gi\|225712054\|gb\|ACO11873.1\|	2.312e-107	96.25	Translocon-associated protein subunit beta precurs...	[more]
gi\|225719752\|gb\|ACO15722.1\|	7.293e-87	78.88	Translocon-associated protein subunit beta precurs...	[more]
gi\|225708928\|gb\|ACO10310.1\|	1.050e-79	77.64	Translocon-associated protein subunit beta precurs...	[more]
gi\|225710348\|gb\|ACO11020.1\|	6.756e-79	77.02	Translocon-associated protein subunit beta precurs...	[more]
gi\|225711116\|gb\|ACO11404.1\|	2.160e-52	76.92	Translocon-associated protein subunit beta precurs...	[more]
gi\|820854569\|ref\|XP_012344584.1\|	3.254e-43	45.40	PREDICTED: translocon-associated protein subunit b...	[more]
gi\|1059236859\|ref\|XP_017763274.1\|	3.749e-43	46.30	PREDICTED: translocon-associated protein subunit b...	[more]
gi\|1035621792\|ref\|XP_016918833.1\|	4.180e-43	45.68	PREDICTED: translocon-associated protein subunit b...	[more]

Pages

BLAST of EMLSAG00000000442 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1


Match Name	E-value	Identity	Description
maker-scaffold91_size383040-snap-gene-1.29	8.089e-48	54.69	protein:Tk03177 transcript:maker-scaffold91_size38...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1068	supercontig	LSalAtl2s1068:97826..99509 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	augustus_masked-LSalAtl2s1068-processed-gene-1.2
Biotype	protein_coding
Evidence	IEA
Note	Translocon-associated protein subunit beta [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000000442 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000000442	EMLSAT00000000442-696289	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1068:97826..99509+

gene from alignment at LSalAtl2s1068:97826..99509+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000000442-683208 ID=EMLSAG00000000442-683208|Name=EMLSAG00000000442|organism=Lepeophtheirus salmonis|type=gene|length=1684bp|location=Sequence derived from alignment at LSalAtl2s1068:97826..99509+ (Lepeophtheirus salmonis)
AGCGCGTAGAGCCTTCCCTCATCATTACCAACTACTTATATAAGACTAAG
GAAACTTTTTTATAAAATATATATGTGAGTTTTAACCACAAAGTCTTATG
TTTATAAGATGAGCCTGTGTAAATAGTTTTATACTCCTAGATGAGGCCCC
TTGTTGAAGATATGCCTATTTTAAAGAATGCGGAAGGATCTTAGCAAGTG
GTACCCTTGAGTGTATGTTTGATGGATCATGGATAGAAAGGAAGATCCGG
GGAAGTACACGTCACATGAAATSAAACGGCAGAGKTGTGRCGTCATTGCC
GGAGTGAAGGAAGTGCTCAAAGTTAAGGAGTCGCGTCTGAGTTAGATTTA
GTTACTTGTTAGTTTATTCCAAGTTTTGATCTCAAGTCCATCAACATGAA
ACTCATCTTGTATTCCATGGTCGTCTTAGGACTCTTTACAGGCTATTCGT
CTTCCACGGAAGGAAAGGATGCCTCTGGAAGCAAGCCTGCGCATTTACTC
CTCTCCAAACAGGTAAGACTCCTGGATATTGTCCTTGAGAAGCTCTAATG
ATCCCATTCCCGTATTATTTGATTGCGCCGACTAGGTCCAAAACAAGTAT
CTTGTGGAAGGAATGGACATTGTGGTGAAATACGCGATCTACAACATTGG
KGAGCAGCCTGCCGTGGACGTGCAGGTGAAGGAAGTGGGCTTCCCCGAGG
ACTCGTTTGATGTAGTGAGTGGACACGCGTCCTTCAAATTGGATCGCATT
CCTCCTCACTCCAACAACACACATACTCTTGTCGTGAGACCCAAGAAGTT
CGGATACTTTAMCTTCMCTYCCGCCGAAGTTCAATMCCGCGTCTCGGACG
AGGCTGACGATATTATTCAAACGGGGGCCTCTTCGGATCCAGGACACGGA
GTTATTATCTCCCTTAAGAACTATGACAAACAGTTCTCTGCTCACATTGT
AATTTACATTCTTTTTTTCTTTGACAACTCACTTCCCCTTCATTTTCTAT
ACTTGAGATAGTATTGTGTTATTGTGTTGGTCCATAAAGAAAGTCAAATC
CATCCCTCGGGGTGTGATTCAAGGTCCGTTTTTTTAATTAGTCAATTAAA
TAATGGAGTAATCATTTAATATGCTCGCATTATGTTGAAAACAAGCATAC
TTTTGCAAGATATATGCAATAATGCTCTTAATACTTGCATCTTATTTGCC
ATAATAAACCACCACCCCATCATATTTAGGAAAATTAAAGAACGGACAGT
CCAAAGACGGGGCTGAATAATTTGGGATCGACACAACGCTAACTTCTGAC
GAATATTTAAGCCATTAGTTAAGAGTCAAAGATGATAATATGTGGAGGAC
CATCTTTCAGATCATGACTAAAAAATCGCGATGAGTGTAGAAAACTCCTT
GCTCACTAATACTACGTTCAAATTTCTAAATGGGTGGGGAATAATTCATA
AGAAATATCTTACAGGCTTCAATATATACCCCTTTTGCTCAATGTATTCT
CATGAGGATTTTGACAATTTCCACATCTATACTCAAGTTTTATTTCAAGG
TTAACTTAATGATAAAATATCTTCCGTTGCCAAGTTAATGCAATTTGAGA
CAAGGTGATCAAAATAGGATTGTTTTCCTTATATTATATCTTGAATTTGA
TTTTTTTTAGTACCAGACTGCGTGCTGTTTTTAA

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