EMLSAG00000000567, EMLSAG00000000567-683333 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000567
Unique NameEMLSAG00000000567-683333
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000000567 vs. GO
Match: - (symbol:TMPRSS2 "Transmembrane protease serine 2" species:9606 "Homo sapiens" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005044 "scavenger receptor activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] InterPro:IPR001190 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR002172 InterPro:IPR009003 InterPro:IPR017448 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50068 PROSITE:PS50240 PROSITE:PS50287 SMART:SM00020 SMART:SM00192 SMART:SM00202 GO:GO:0005886 GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 GO:GO:0005044 GO:GO:0006898 SUPFAM:SSF50494 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 SUPFAM:SSF56487 HOGENOM:HOG000251822 EMBL:AP001610 HGNC:HGNC:11876 ChiTaRS:TMPRSS2 ProteinModelPortal:C9JKZ3 SMR:C9JKZ3 Ensembl:ENST00000454499 NextBio:35486879 ArrayExpress:C9JKZ3 Bgee:C9JKZ3 Uniprot:C9JKZ3)

HSP 1 Score: 49.6766 bits (117), Expect = 3.778e-6
Identity = 25/76 (32.89%), Postives = 43/76 (56.58%), Query Frame = 0
Query:   42 PWHVYAGAGVF-----YYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQ 112
            PWH  A AG+      +Y +GYQ   V+  ++H  Y+ +T  N++A++ L+  L +ND V P+C  +  + +Q  Q
Sbjct:  305 PWHWTAFAGILRQSFMFYGAGYQ---VEKVISHPNYDSKTKNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQ 377          
BLAST of EMLSAG00000000567 vs. GO
Match: - (symbol:TMPRSS2 "Transmembrane protease serine 2" species:9606 "Homo sapiens" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005044 "scavenger receptor activity" evidence=IEA] [GO:0005887 "integral component of plasma membrane" evidence=TAS] [GO:0008236 "serine-type peptidase activity" evidence=TAS] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] InterPro:IPR001190 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR002172 InterPro:IPR009003 InterPro:IPR017448 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50068 PROSITE:PS50240 PROSITE:PS50287 SMART:SM00020 SMART:SM00192 SMART:SM00202 GO:GO:0005737 GO:GO:0070062 GO:GO:0005887 GO:GO:0006508 EMBL:CH471079 GO:GO:0004252 GO:GO:0008236 GO:GO:0005044 GO:GO:0006898 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304 OrthoDB:EOG75B84T Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 SUPFAM:SSF56487 TreeFam:TF351678 EMBL:AP001610 EMBL:U75329 EMBL:AF123453 EMBL:AF270487 EMBL:AK291813 EMBL:AK296860 EMBL:AK313338 EMBL:AK222784 EMBL:BC051839 RefSeq:NP_001128571.1 RefSeq:NP_005647.3 RefSeq:XP_005261098.1 UniGene:Hs.439309 ProteinModelPortal:O15393 SMR:O15393 STRING:9606.ENSP00000330330 BindingDB:O15393 ChEMBL:CHEMBL1795140 MEROPS:S01.247 PhosphoSite:O15393 PaxDb:O15393 PRIDE:O15393 DNASU:7113 Ensembl:ENST00000332149 Ensembl:ENST00000398585 Ensembl:ENST00000458356 GeneID:7113 KEGG:hsa:7113 UCSC:uc002yzj.3 CTD:7113 GeneCards:GC21M042836 HGNC:HGNC:11876 HPA:HPA013182 MIM:602060 neXtProt:NX_O15393 PharmGKB:PA36577 KO:K09633 OMA:KSWHPVC PhylomeDB:O15393 ChiTaRS:TMPRSS2 GeneWiki:TMPRSS2 GenomeRNAi:7113 NextBio:27847 PRO:PR:O15393 ArrayExpress:O15393 Bgee:O15393 CleanEx:HS_TMPRSS2 Genevestigator:O15393 Uniprot:O15393)

HSP 1 Score: 49.6766 bits (117), Expect = 4.117e-6
Identity = 25/76 (32.89%), Postives = 43/76 (56.58%), Query Frame = 0
Query:   42 PWHVYAGAGVF-----YYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQ 112
            PWH  A AG+      +Y +GYQ   V+  ++H  Y+ +T  N++A++ L+  L +ND V P+C  +  + +Q  Q
Sbjct:  305 PWHWTAFAGILRQSFMFYGAGYQ---VEKVISHPNYDSKTKNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQ 377          
BLAST of EMLSAG00000000567 vs. GO
Match: - (symbol:LOC100739292 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 OrthoDB:EOG75B84T TreeFam:TF351678 GeneTree:ENSGT00730000110467 EMBL:CU467746 Ensembl:ENSSSCT00000026685 OMA:VALRCID Uniprot:I3LBF8)

HSP 1 Score: 48.1358 bits (113), Expect = 8.668e-6
Identity = 22/74 (29.73%), Postives = 42/74 (56.76%), Query Frame = 0
Query:   43 WHVYAG---AGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQS 113
            W  +AG       +Y SGY+   V   ++H  Y+P+T  N++A++ L+  + +ND+V P+C  +  + ++  QS
Sbjct:   60 WTAFAGILRQSFMFYGSGYR---VAKVISHPNYDPKTKNNDIALMKLQTPMTFNDKVKPVCLPNPGMMLEPTQS 130          
BLAST of EMLSAG00000000567 vs. GO
Match: - (symbol:MASP2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0001867 "complement activation, lectin pathway" evidence=IEA] [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA] [GO:0048306 "calcium-dependent protein binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR001881 InterPro:IPR009003 InterPro:IPR018097 InterPro:IPR018114 InterPro:IPR024175 Pfam:PF00089 Pfam:PF07645 PIRSF:PIRSF001155 PRINTS:PR00722 PROSITE:PS00135 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50240 SMART:SM00020 SMART:SM00179 InterPro:IPR000152 GO:GO:0005576 GO:GO:0005509 GO:GO:0006508 GO:GO:0004252 InterPro:IPR013032 SUPFAM:SSF50494 PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR000436 Pfam:PF00084 SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 GeneTree:ENSGT00560000076882 TreeFam:TF330373 GO:GO:0001867 CTD:10747 KO:K03993 OMA:WTLTAPP EMBL:AAEX03001938 RefSeq:XP_544572.4 ProteinModelPortal:F6USM4 Ensembl:ENSCAFT00000026513 GeneID:487447 KEGG:cfa:487447 Uniprot:F6USM4)

HSP 1 Score: 46.2098 bits (108), Expect = 5.896e-5
Identity = 23/57 (40.35%), Postives = 34/57 (59.65%), Query Frame = 0
Query:   58 YQDGYVKSFVAHEGYNPRTG-ENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQS 113
            Y     ++   HEGY P  G +N++A+I L++R+V N  VLPIC     LP +E +S
Sbjct:  509 YTQARAEAIFIHEGYTPDAGFDNDIALIKLKNRVVINSNVLPIC-----LPRKEAES 560          
BLAST of EMLSAG00000000567 vs. GO
Match: - (symbol:TMPRSS2 "Transmembrane protease, serine 2" species:9913 "Bos taurus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005044 "scavenger receptor activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR001190 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR002172 InterPro:IPR009003 InterPro:IPR017448 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50068 PROSITE:PS50240 PROSITE:PS50287 SMART:SM00020 SMART:SM00192 SMART:SM00202 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 GO:GO:0005044 GO:GO:0006898 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304 OrthoDB:EOG75B84T Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 SUPFAM:SSF56487 TreeFam:TF351678 GeneTree:ENSGT00730000110467 HOGENOM:HOG000251822 MEROPS:S01.247 CTD:7113 KO:K09633 OMA:KSWHPVC EMBL:DAAA02003247 EMBL:DAAA02003248 EMBL:BC133425 RefSeq:NP_001075054.1 RefSeq:XP_005202057.1 UniGene:Bt.61016 STRING:9913.ENSBTAP00000012036 Ensembl:ENSBTAT00000012036 GeneID:511037 KEGG:bta:511037 InParanoid:A2VDV7 NextBio:20869739 Uniprot:A2VDV7)

HSP 1 Score: 44.669 bits (104), Expect = 1.869e-4
Identity = 22/74 (29.73%), Postives = 41/74 (55.41%), Query Frame = 0
Query:   43 WHVYAG---AGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQS 113
            W  +AG       +Y SGY+   V   ++H  Y+ +T  N++A++ L+  L +ND+V P+C  +  + ++  QS
Sbjct:  306 WVAFAGILKQSYMFYGSGYR---VAKVISHPNYDSKTKNNDIALMKLQTPLTFNDKVKPVCLPNPGMMLEPTQS 376          
BLAST of EMLSAG00000000567 vs. C. finmarchicus
Match: gi|592816175|gb|GAXK01138393.1| (TSA: Calanus finmarchicus comp102651_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.1282 bits (100), Expect = 2.089e-4
Identity = 24/93 (25.81%), Postives = 47/93 (50.54%), Query Frame = 0
Query:   58 YQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTD-------------DYLPIQEGQSATCKCIDSYLNQYEIDKIKRETVE 137
            ++D  ++S   H  YNP T +N++A+I L  ++V+ + ++P+C  D              +     GQS+T     + L + E++ I +ET +
Sbjct: 1203 HEDFDIESKTVHPDYNPATFQNDIALIRLSKKVVYKEHIIPVCLPDASAKFVGDKATVVGWGRTAHGQSST----PAKLQEVEVEVISQETCQ 1469          
BLAST of EMLSAG00000000567 vs. C. finmarchicus
Match: gi|592952766|gb|GAXK01005787.1| (TSA: Calanus finmarchicus comp5107068_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.5874 bits (96), Expect = 5.140e-4
Identity = 21/56 (37.50%), Postives = 34/56 (60.71%), Query Frame = 0
Query:   59 QDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQSA 114
            +D  VK+   HE YN +T EN++A++ L  +  +N  + PIC   D + + EG+SA
Sbjct:  183 RDFGVKTIYMHENYNRKTYENDIALLKLEKKTSFNKDIWPICLPPDNVAL-EGKSA 347          
BLAST of EMLSAG00000000567 vs. C. finmarchicus
Match: gi|592882465|gb|GAXK01075910.1| (TSA: Calanus finmarchicus comp1869302_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 9.527e-3
Identity = 17/70 (24.29%), Postives = 35/70 (50.00%), Query Frame = 0
Query:   32 SEGYFDNAVFPWHVYAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICF 101
            +  + +  +F + V+ G        G Q     ++++H GYN  T +N+ AII L   ++++  + P+C 
Sbjct:  303 TAAHCETIIFLFRVHLGDHDVTVSDGEQVVSPAAWISHPGYNGDTSDNDFAIIRLSRDVIFSTSITPVCL 512          
BLAST of EMLSAG00000000567 vs. C. finmarchicus
Match: gi|592825119|gb|GAXK01130042.1| (TSA: Calanus finmarchicus comp70669_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 1.663e-2
Identity = 14/47 (29.79%), Postives = 23/47 (48.94%), Query Frame = 0
Query:   59 QDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDY 105
            Q+  V+  + H  Y  R   NNLAI+  +   V+ D + P+C    +
Sbjct:  151 QESQVEKIIIHPEYEARRNWNNLAILQTKQNFVYQDHIGPVCLPKPF 291          
BLAST of EMLSAG00000000567 vs. C. finmarchicus
Match: gi|592949817|gb|GAXK01008736.1| (TSA: Calanus finmarchicus comp2504983_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.8834 bits (76), Expect = 8.991e-2
Identity = 18/45 (40.00%), Postives = 23/45 (51.11%), Query Frame = 0
Query:   69 HEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQS 113
            H  Y P T E++ AI+ L   L ++  V PIC     LP Q G S
Sbjct:   35 HPNYKPDTNEHDFAILTLCKPLAFSKNVSPIC-----LPGQSGDS 154          
BLAST of EMLSAG00000000567 vs. C. finmarchicus
Match: gi|592856970|gb|GAXK01100574.1| (TSA: Calanus finmarchicus comp6641_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 35.039 bits (79), Expect = 1.027e-1
Identity = 14/40 (35.00%), Postives = 24/40 (60.00%), Query Frame = 0
Query:   63 VKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFT 102
            VK  + H+G++  T  N++AI+ L D + +N  + PIC  
Sbjct:  916 VKRVIRHKGFSSSTLWNDVAILTLEDEVSYNSNIQPICLA 1035          
BLAST of EMLSAG00000000567 vs. C. finmarchicus
Match: gi|592752969|gb|GAXK01201444.1| (TSA: Calanus finmarchicus comp145820_c7_seq1 transcribed RNA sequence)

HSP 1 Score: 34.6538 bits (78), Expect = 1.124e-1
Identity = 14/39 (35.90%), Postives = 24/39 (61.54%), Query Frame = 0
Query:   63 VKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICF 101
            V + + HE YN R+ +N++AII L + + +   + PIC 
Sbjct:  517 VANVIKHEEYNSRSYDNDIAIIELEEEVTFKKGISPICL 633          
BLAST of EMLSAG00000000567 vs. C. finmarchicus
Match: gi|592856752|gb|GAXK01100792.1| (TSA: Calanus finmarchicus comp6903_c10_seq13 transcribed RNA sequence)

HSP 1 Score: 34.6538 bits (78), Expect = 1.227e-1
Identity = 12/47 (25.53%), Postives = 28/47 (59.57%), Query Frame = 0
Query:   58 YQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDD 104
            +QD  V+   +H  ++P+T E +LA++   + + +   ++P+C  +D
Sbjct:  295 FQDRKVQIVASHPKFDPKTFEYDLALLRFYEPVTFQPNIIPVCIPED 435          
BLAST of EMLSAG00000000567 vs. C. finmarchicus
Match: gi|592778605|gb|GAXK01175963.1| (TSA: Calanus finmarchicus comp2611_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 34.6538 bits (78), Expect = 1.235e-1
Identity = 21/73 (28.77%), Postives = 38/73 (52.05%), Query Frame = 0
Query:   43 WHVYAGAGVFYYDSGYQDGYVKSF--VAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQS 113
            +++ AGA     DS      + S+    H  ++P T EN++A++ L +++ +ND + P C     LP  E +S
Sbjct:  404 FNILAGAHDVRADSEPHRVEITSYEGFTHPDWDPNTLENDIALVRLPEKIEFNDYIRPAC-----LPPAEDES 607          
BLAST of EMLSAG00000000567 vs. C. finmarchicus
Match: gi|592841497|gb|GAXK01116047.1| (TSA: Calanus finmarchicus comp169960_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.8834 bits (76), Expect = 1.371e-1
Identity = 19/75 (25.33%), Postives = 34/75 (45.33%), Query Frame = 0
Query:   32 SEGYFDNAVFPWHVYAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWND---RVLPICFTD 103
            +  +   AV  + V  G        G Q      +++HE Y+  + +N+ AII L   + ++D    V+P+C  D
Sbjct:  197 TAAHCKTAVSQFRVVVGEHDVTRSDGEQRITPSQWISHENYSSNSQDNDFAIIRLSQDVTFSDTVITVMPVCMPD 421          
BLAST of EMLSAG00000000567 vs. L. salmonis peptides
Match: EMLSAP00000000567 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1094:105139:108358:-1 gene:EMLSAG00000000567 transcript:EMLSAT00000000567 description:"snap-LSalAtl2s1094-processed-gene-1.25")

HSP 1 Score: 373.244 bits (957), Expect = 4.244e-133
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
Query:    1 MWVEVSLLVKYFKNCGVSNDLGNSCKMQKAGSEGYFDNAVFPWHVYAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQSATCKCIDSYLNQYEIDKIKRETVEYLGKMNWKQKGKILDGILKSVDENKKDDPIMRMMMILIEEQK 179
            MWVEVSLLVKYFKNCGVSNDLGNSCKMQKAGSEGYFDNAVFPWHVYAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQSATCKCIDSYLNQYEIDKIKRETVEYLGKMNWKQKGKILDGILKSVDENKKDDPIMRMMMILIEEQK
Sbjct:    1 MWVEVSLLVKYFKNCGVSNDLGNSCKMQKAGSEGYFDNAVFPWHVYAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQSATCKCIDSYLNQYEIDKIKRETVEYLGKMNWKQKGKILDGILKSVDENKKDDPIMRMMMILIEEQK 179          
BLAST of EMLSAG00000000567 vs. L. salmonis peptides
Match: EMLSAP00000000568 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1094:119279:122247:-1 gene:EMLSAG00000000568 transcript:EMLSAT00000000568 description:"snap-LSalAtl2s1094-processed-gene-1.29")

HSP 1 Score: 168.318 bits (425), Expect = 2.437e-51
Identity = 83/143 (58.04%), Postives = 94/143 (65.73%), Query Frame = 0
Query:   14 NCGVSNDLGNSCKMQKAGSEGYFDNAVFPWHV---------------------------------------YAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQSATCK 117
            +CGVSNDLG+SC+ Q  GSEGYFDNAVFPWHV                                        AG+G F+Y  G+QDG +KSFVAHEGYNP+TGENN+AIIGL DRLVWNDRVLPIC TD+YLPIQ+GQSATCK
Sbjct:   65 DCGVSNDLGHSCQQQAEGSEGYFDNAVFPWHVRIINRRNKQILCNGVILTNDRVITTANCKGYYHKYGINVIAGSGTFFYIDGFQDGIIKSFVAHEGYNPQTGENNIAIIGLHDRLVWNDRVLPICLTDNYLPIQDGQSATCK 207          
BLAST of EMLSAG00000000567 vs. L. salmonis peptides
Match: EMLSAP00000005345 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2882:48158:49259:1 gene:EMLSAG00000005345 transcript:EMLSAT00000005345 description:"augustus-LSalAtl2s2882-processed-gene-0.0")

HSP 1 Score: 159.844 bits (403), Expect = 2.339e-48
Identity = 78/141 (55.32%), Postives = 92/141 (65.25%), Query Frame = 0
Query:   14 NCGVSNDLGNSCKMQKAGSEGYFDNAVFPWH---------------------------------------VYAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQSAT 115
            +CGVSNDLGNSC  QK GS+G+FDNAVFPWH                                       +YAG+G +Y + GYQDG VKSFVAHEGYN +TGENN+A+IGL +RLVWNDRVLPICF++DY PI+EGQSAT
Sbjct:   70 DCGVSNDLGNSCNQQKEGSQGFFDNAVFPWHAHIVNRENQQVLCNGVIVSNDRVLTTANCKGYYHKHGINIYAGSGTYYNNDGYQDGRVKSFVAHEGYNMKTGENNIAVIGLHNRLVWNDRVLPICFSNDYFPIKEGQSAT 210          
BLAST of EMLSAG00000000567 vs. L. salmonis peptides
Match: EMLSAP00000004014 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2151:16886:18993:-1 gene:EMLSAG00000004014 transcript:EMLSAT00000004014 description:"snap-LSalAtl2s2151-processed-gene-0.9")

HSP 1 Score: 156.377 bits (394), Expect = 1.775e-46
Identity = 88/191 (46.07%), Postives = 105/191 (54.97%), Query Frame = 0
Query:   14 NCGVSNDLGNSCKMQKAGSEGYFDNAVFPWH---------------------------------------VYAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQSATCKCIDSYLNQYEIDKIKRETVEYLGKMNWKQKGKILDGILKSVDENKKDD 165
            +CGVSNDLGNSC  QK GSEG FD AVFPWH                                       VYAG G   Y +G+QDG +KSFV HEGYN  T ENN+AII L +RLVWNDRVLPICF++DY PI++GQSATCK    YLN+YE+  +    + Y     W     +   I+K + EN   D
Sbjct:   64 DCGVSNDLGNSCNQQKEGSEGRFDCAVFPWHARIVHRYKQEVLCNGVILTNDRVLTTANCQGHYHRYGINVYAGGGTNNYANGFQDGIIKSFVPHEGYNMTTCENNIAIIALHERLVWNDRVLPICFSNDYFPIKDGQSATCKYTYIYLNKYEV--VSGSDIVY----TWSYVPLVHFSIVKKLGENIHKD 248          
BLAST of EMLSAG00000000567 vs. L. salmonis peptides
Match: EMLSAP00000004811 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2544:4253:5591:-1 gene:EMLSAG00000004811 transcript:EMLSAT00000004811 description:"snap-LSalAtl2s2544-processed-gene-0.4")

HSP 1 Score: 150.984 bits (380), Expect = 8.728e-46
Identity = 77/153 (50.33%), Postives = 93/153 (60.78%), Query Frame = 0
Query:   14 NCGVSNDLGNSCKMQKAGSEGYFDNAVFPWH---------------------------------------VYAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQSATCKCIDSYLNQYE 127
            +CGVSNDLGNSC+ QK  SEGYFDNAVFPWH                                       VYAGAG  Y + GYQ+G+VK FVAHE Y   T ENN+AII L+++LVWND+VLPICF+++Y PI++GQ ATCK    Y N+YE
Sbjct:   19 DCGVSNDLGNSCQRQKEASEGYFDNAVFPWHARIVNIQNAEVLCNGVILSDTRVLTTANCKGYYHRYPVIVYAGAGTHYTEDGYQNGWVKGFVAHESYKMETRENNIAIIYLKNKLVWNDKVLPICFSNNYFPIRDGQLATCKWTKIYSNKYE 171          
BLAST of EMLSAG00000000567 vs. L. salmonis peptides
Match: EMLSAP00000007986 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4743:658:1503:-1 gene:EMLSAG00000007986 transcript:EMLSAT00000007986 description:"augustus-LSalAtl2s4743-processed-gene-0.0")

HSP 1 Score: 105.145 bits (261), Expect = 6.163e-28
Identity = 59/164 (35.98%), Postives = 80/164 (48.78%), Query Frame = 0
Query:   15 CGVSNDLGNSCKMQKAGSEGYFDNAVFPWHV---------------------------------------YAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQSATCKCIDSYLNQYEIDKIKRETVEYL 139
            CGVSN++  SC  Q  G EG  +N  FPWHV                                       YAG+G  +  +GYQ   ++ ++ HE YN  T ENN+AII L + LVWND+VLPICF+ D  P++EG+ AT    +   N Y+I +I    V+ L
Sbjct:   18 CGVSNNITISCNKQXQGEEGDLENDAFPWHVFIVGRAEQEKLCNGIILTHNRLLTTANCAQYYHSKVIDVYAGSGGRFPSNGYQAVSIQKYIQHENYNMTTRENNIAIIFLNNNLVWNDKVLPICFSSDNFPVEEGKKATFTGSNIVQNDYKISRIHYSIVKTL 181          
BLAST of EMLSAG00000000567 vs. L. salmonis peptides
Match: EMLSAP00000009325 (pep:novel supercontig:LSalAtl2s:LSalAtl2s595:738044:740181:-1 gene:EMLSAG00000009325 transcript:EMLSAT00000009325 description:"maker-LSalAtl2s595-augustus-gene-7.5")

HSP 1 Score: 60.4622 bits (145), Expect = 3.597e-12
Identity = 35/102 (34.31%), Postives = 49/102 (48.04%), Query Frame = 0
Query:   14 NCGVSNDLGNSCKMQKAGSEGYFDNAVFPWHVYAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQSAT 115
             CG+S  +  SC         Y  N  FPWHV  G+      S  Q   V+  V HEG++  TG N++A+I    +  + D VLP+C   D   IQ+G + T
Sbjct:   76 TCGLSASISRSCNDDVLR---YASNPDFPWHVQVGSSKMIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCMNIDRSIIQQGANGT 174          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000567 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 5
Match NameE-valueIdentityDescription
-3.778e-632.89symbol:TMPRSS2 "Transmembrane protease serine 2" s... [more]
-4.117e-632.89symbol:TMPRSS2 "Transmembrane protease serine 2" s... [more]
-8.668e-629.73symbol:LOC100739292 "Uncharacterized protein" spec... [more]
-5.896e-540.35symbol:MASP2 "Uncharacterized protein" species:961... [more]
-1.869e-429.73symbol:TMPRSS2 "Transmembrane protease, serine 2" ... [more]
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BLAST of EMLSAG00000000567 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592816175|gb|GAXK01138393.1|2.089e-425.81TSA: Calanus finmarchicus comp102651_c0_seq1 trans... [more]
gi|592952766|gb|GAXK01005787.1|5.140e-437.50TSA: Calanus finmarchicus comp5107068_c0_seq1 tran... [more]
gi|592882465|gb|GAXK01075910.1|9.527e-324.29TSA: Calanus finmarchicus comp1869302_c0_seq1 tran... [more]
gi|592825119|gb|GAXK01130042.1|1.663e-229.79TSA: Calanus finmarchicus comp70669_c2_seq1 transc... [more]
gi|592949817|gb|GAXK01008736.1|8.991e-240.00TSA: Calanus finmarchicus comp2504983_c0_seq1 tran... [more]
gi|592856970|gb|GAXK01100574.1|1.027e-135.00TSA: Calanus finmarchicus comp6641_c0_seq1 transcr... [more]
gi|592752969|gb|GAXK01201444.1|1.124e-135.90TSA: Calanus finmarchicus comp145820_c7_seq1 trans... [more]
gi|592856752|gb|GAXK01100792.1|1.227e-125.53TSA: Calanus finmarchicus comp6903_c10_seq13 trans... [more]
gi|592778605|gb|GAXK01175963.1|1.235e-128.77TSA: Calanus finmarchicus comp2611_c0_seq4 transcr... [more]
gi|592841497|gb|GAXK01116047.1|1.371e-125.33TSA: Calanus finmarchicus comp169960_c0_seq1 trans... [more]

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BLAST of EMLSAG00000000567 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 7
Match NameE-valueIdentityDescription
EMLSAP000000005674.244e-133100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1094:1051... [more]
EMLSAP000000005682.437e-5158.04pep:novel supercontig:LSalAtl2s:LSalAtl2s1094:1192... [more]
EMLSAP000000053452.339e-4855.32pep:novel supercontig:LSalAtl2s:LSalAtl2s2882:4815... [more]
EMLSAP000000040141.775e-4646.07pep:novel supercontig:LSalAtl2s:LSalAtl2s2151:1688... [more]
EMLSAP000000048118.728e-4650.33pep:novel supercontig:LSalAtl2s:LSalAtl2s2544:4253... [more]
EMLSAP000000079866.163e-2835.98pep:novel supercontig:LSalAtl2s:LSalAtl2s4743:658:... [more]
EMLSAP000000093253.597e-1234.31pep:novel supercontig:LSalAtl2s:LSalAtl2s595:73804... [more]
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BLAST of EMLSAG00000000567 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000567 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000567 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000567 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1094supercontigLSalAtl2s1094:105139..108358 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap-LSalAtl2s1094-processed-gene-1.25
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000567 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000567EMLSAT00000000567-696414Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1094:105139..108358-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000567-683333 ID=EMLSAG00000000567-683333|Name=EMLSAG00000000567|organism=Lepeophtheirus salmonis|type=gene|length=3220bp|location=Sequence derived from alignment at LSalAtl2s1094:105139..108358- (Lepeophtheirus salmonis)
ATGTGGGGTAAAAAAGTTTTTTTGGGTGCCTAGAAACGCGACAATAGTAC AGGTTAAACTCTATTTTTTGTTCCATTTATACTCTTGTTCAATCTGAGGT TGTGGCGGTTACGATACTGCAATTTGGGCGTCTAACCCAGTATAAAGAAA CTACTTCCTCATCGAATGAAAGAAGAGTACCTTTATAATAGTATATTCAT TCACATGAAGCCAAAATGAGAATTATTCTTAAAGTAGTTATTTATTACCT ATTAATTAAATAGACGAGTTCTTATTTATATTAGAGTCCTTTATCTCCTC GGTAAGCCTAATCTAGTATAAATTATATTGATAATTATAGTTGAGTTACT ATTCTCATGAATTATTCACATCTATTGTAGTTGGCAAAATTAATTAATTG TTAATATATGACCACTTAATCATTGATTGACGAGTCAAATAATTAAATAT GCCGTCATTAAAAATTAGTTTAATGAGAATCATAATTATGCAGTATTGGA GCATAATTCATCATCAAGTATATTTAATATTTTTTTGGCAAAGTGTCTTA ACCTGACTATTTCCTTTGGGTTATAAATGGTTTTAAGGTTTGATGGGAAC ATAAGGGAGGCTTAAGTATTAATCAAGAGCCTTATAACATTTCTAAAAGC AAAATAAGGTTCAAGACGTGAGATTAGAGATACACCAATTAACATTCTCT AACGATCCAAGCTATAACAATAAAACAATAGTGCATATATTAGAAATAAG CTGTAATTATGTTTTCCCAGTAATATTTATTATAGAACAGATGTGAACAA ATATTGATCTGACAATTGGGAATTCATAGGTATTATTACTTGAGTCACAG GCCATTTCAGCCATGTAAATATTGAAGCAGTTGTCATTTATTTTTTGAAA CACAAATATAAACATATAAATCACATTTTTTTTTCTTCAGTTGAAGTCAG TTTACTCGTCAAATATTTCAAAAGTAAATATACAAACTTGATTCCGTAAC TTAGCCATGAAGATTATCACAATATGTTTATTTCTACAGTCATTAATTTC CACTAATGGCAAAGGTTTGTAAATTTAGTTTTCATTAAATTTAACCCCAA ATATACATGTGAATATTATTAGAATGTACTACTCCGTCTGGAGATTGTTT ATTTCCCTTCACATACCGTGGGACGCATAAAATTTGCACTTTTGTGGATA CAGATATCTATCCTAAGCCTTGGTGCTATGTAAAAAATGGTGGGTGGGAC TATTGCTCAGATGACTGTTTTGGTAAGCATCATAAATTCATTGCAACAGT ATAAAAGAAGATTAATTATATTTTATAAAGACTGTGGAGTATCCAACGAT TTAGGAAACTCATGTAAAATGCAAAAAGCGGGCTCAGAGGGATATTTTGA TAATGCCGTATTCCCTTGGCATGTACGTATAGTAAACATCAATAACCAAC AAGTATTGTGTAATGGAGTTATCTTAAACAATGATCATGTGCTAACTACA GCTAGTTGTAAAGGATTTTATCACCAATACGGAATTATTGTAGGTGTAAT ATTAGAGTTGAACTTACCTCCAATGATGATATAATATTTTGTTTCAATAA TATGGTAATTATTACATATAAGACTTTCCTTTTCGTCTAAGGTATATGCT GGAGCAGGTGTATTCTACTATGACAGTGGTTATCAAGACGGATATGTTAA AAGTTTTGTTGCACATGAAGGTTACAACCCTCGAACAGGTGAGAACAACC TTGCCATAATTGGCCTACGCGACAGATTAGTTTGGAATGATAGAGTCCTT CCCATTTGCTTTACTGACGATTATTTACCAATTCAGGAAGGACAATCAGC AACTTGTAAGTGTATTGATAGTTATTTAAATCAATATGAAATAGGTAACA CATAGACTTAAACTTTTCAGTTAGTGGATCTTATATTTATAATACTGGGA GCTTTATACCATATGTTCACTTTTCCGTTGTAAAAAAATTGCCAGAACAT ACGGACAGAGATTGCCAAAAAAATGATCTTTTTTGTACAACAAAAAACTC AGTAAGTTATCTTGTCAATCAAGGAGGACCATTAACCATATGTCAAGATT CGAAAAGATGTATTTTGGTTGGCATTCTATCAGGCATCAACGAAAATAAA AAATTCCTTGTTTTTACAAATATTTCGGGGCATGTAAACTGGATCTATAA TCATATTTAAATGATATCTGTCAGATTGATAATAAAAATTTTGAAGCATA TTTGTGCATGCACTTAAATTTAAGATATTTAATTAATCAACAAACTACTC TCTGATCAAACAACATAAATGTAATATGCTGAAAGGAACATATTGATATC AAGAGATAAACAACAATAGTAAGATTTCGGAGTTGAAACACAGAAGTTTA AAGCTAGTTTGAAAGGCTATAAATATACAAATAATAAATTTTGGAGAATA AGGTCTTCAGAGTTCTTAAGACTACTTTATAAATAAAAGTTCAAAACAGA TCCTTCCTTGAAGTATATTTTTCCCCAAAAATGATATATACAAATAGGTA CTGATATAGGCAATGGCATATTGTAATTCAAAGAAAAATGTTATTTATAA AAAGTTTATTGTTTATGTGTGTTAAAAATAAGTAAATGAGTGCTTTTTTG CATAATAATGTTTGGATTTGTTTGCACGTCCGGTTCGGGAGAAATTGCAC AACTTATACACCTTCATTGCTCGGAAATAAAACGGATTATTCCATTGTAA TCCGGAAATGAATAAATTATAAATCTAAGGGAGAGAAGGGGGGGGGGGCA TTTTATAAAGAAAATAGTTTCCTGGAGGAGGGGCGTTAATTTTCTCAAGA ATGGAGCATGGGTACTTCTCACTATTATTTATGTCAAAAAATTAAGACAA CAAAGTATCGTCCAGAACCTAGTTTAAAATATAAATCATAGGAAATGAAT TATACAGCGTTTTGGTAACTCAAAGTTTTAAAATGCCAAAATTGAATCTT GAATTACCATGAAAATAGACTTGTTGACTCTTTTAATTTAAATGTTTCTA CGTTCTGTTTTGAAGATAAAATTAAGAGAGAGACTGTAGAATACCTGGGA AAGATGAATTGGAAGCAGAAGGGTAAAATTTTAGATGGAATTCTAAAATC GGTCGATGAAAATAAGAAGGATGATCCAATTATGAGAATGATGATGATTT TGATTGAAGAGCAAAAGTGA
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