EMLSAG00000000583, EMLSAG00000000583-683349 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000583 vs. GO
Match: - (symbol:NFE2 "Transcription factor NF-E2 45 kDa subunit" species:9913 "Bos taurus" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030502 "negative regulation of bone mineralization" evidence=IEA] [GO:0034242 "negative regulation of syncytium formation by plasma membrane fusion" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0050699 "WW domain binding" evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA] [GO:2000758 "positive regulation of peptidyl-lysine acetylation" evidence=IEA] InterPro:IPR004826 InterPro:IPR004827 InterPro:IPR008917 Pfam:PF03131 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 GO:GO:0005634 GO:GO:0005737 GO:GO:0015629 GO:GO:0043565 GO:GO:0007267 GO:GO:0003700 GO:GO:0006351 GO:GO:0060716 TreeFam:TF326681 Gene3D:1.10.880.10 SUPFAM:SSF47454 GeneTree:ENSGT00550000074399 GO:GO:0030502 OrthoDB:EOG715Q3N HOGENOM:HOG000234410 EMBL:BT020636 EMBL:BT021174 RefSeq:NP_001014923.1 RefSeq:XP_005206207.1 RefSeq:XP_005206208.1 RefSeq:XP_005206209.1 RefSeq:XP_005206210.1 RefSeq:XP_005206211.1 UniGene:Bt.24217 ProteinModelPortal:Q5EAD3 STRING:9913.ENSBTAP00000002043 PRIDE:Q5EAD3 Ensembl:ENSBTAT00000002043 Ensembl:ENSBTAT00000047424 GeneID:514006 KEGG:bta:514006 CTD:4778 eggNOG:NOG326795 HOVERGEN:HBG002901 InParanoid:Q5EAD3 KO:K09039 OMA:PTDKIVN NextBio:20871140 GO:GO:0034242 GO:GO:2000758 Uniprot:Q5EAD3) HSP 1 Score: 50.8322 bits (120), Expect = 9.151e-6 Identity = 53/199 (26.63%), Postives = 88/199 (44.22%), Query Frame = 0 Query: 168 PLLLLD-----ASSKSEAFPSSESSFVVTAANSSSIEYKKQSSSPSTSSSTNM--ISNPTSTSSNNPPLSITKKQKTPKSTPKAQQKVSSST--SPRKR-----KKEDNLLPKNSKFSKYEIVDTSIDTFNKLLEKMP--KEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEEC 350 PL LLD SK + P S+S + +++ S+E + + S M + P S N+ L+ P TP A + S P R + E L F +IV+ +D FN+LL + P + Q L++D RR+GKN+ AA+ R R+++ ++Q + + L ++ L+R E Sbjct: 124 PLALLDIGLSAGPSKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVEMYPVEYPYSLMPNS--LTHPNYALPPAETPLALEPSSGPVRAKPTARGEAGSRDERRALAMKIPFPTDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLET----IVQLERELERLGSERERLLRARGEA 316
BLAST of EMLSAG00000000583 vs. GO
Match: - (symbol:Nrl "neural retina leucine zipper gene" species:10090 "Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IMP] [GO:0007275 "multicellular organismal development" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression" evidence=IMP] [GO:0043522 "leucine zipper domain binding" evidence=ISO] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive regulation of rhodopsin gene expression" evidence=IGI;IDA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0046548 "retinal rod cell development" evidence=IMP] InterPro:IPR004826 InterPro:IPR004827 InterPro:IPR008917 InterPro:IPR024874 InterPro:IPR028575 Pfam:PF03131 PROSITE:PS50217 SMART:SM00338 MGI:MGI:102567 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0046548 Gene3D:1.10.880.10 SUPFAM:SSF47454 GO:GO:0045872 HOVERGEN:HBG000313 InterPro:IPR013592 PANTHER:PTHR10129 Pfam:PF08383 HOGENOM:HOG000261683 OrthoDB:EOG7BGHMQ TreeFam:TF325689 CTD:4901 eggNOG:NOG271139 KO:K09038 OMA:GDHAHFF ChiTaRS:NRL PANTHER:PTHR10129:SF5 EMBL:L14935 EMBL:BC031440 PIR:A48912 RefSeq:NP_001129546.1 RefSeq:NP_001258845.1 RefSeq:NP_001258846.1 RefSeq:NP_032762.1 UniGene:Mm.20422 ProteinModelPortal:P54846 SMR:P54846 STRING:10090.ENSMUSP00000054457 PhosphoSite:P54846 PRIDE:P54846 Ensembl:ENSMUST00000062232 Ensembl:ENSMUST00000111404 Ensembl:ENSMUST00000178694 GeneID:18185 KEGG:mmu:18185 UCSC:uc007tyu.2 InParanoid:P54846 NextBio:293502 PRO:PR:P54846 ArrayExpress:P54846 Bgee:P54846 CleanEx:MM_NRL Genevestigator:P54846 Uniprot:P54846) HSP 1 Score: 48.9062 bits (115), Expect = 2.805e-5 Identity = 31/110 (28.18%), Postives = 54/110 (49.09%), Query Frame = 0 Query: 251 STSPRKRKKEDNLLPKNSKFSKYEIVDTSIDTFNKLLEKMPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEECKVWANLVDAI 360 S SP + + LP+ +FS +V S+ N+ L +++ + LK RR KNRG A+ R +R++Q L ++ + +L A E+ RL E ++ D + Sbjct: 115 SGSPGETGAQHVQLPE--RFSDAALVSMSVRELNRQLRGCGRDEALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALRAEVARLARERDLYKARCDRL 222
BLAST of EMLSAG00000000583 vs. GO
Match: - (symbol:NFE2 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030502 "negative regulation of bone mineralization" evidence=IEA] [GO:0034242 "negative regulation of syncytium formation by plasma membrane fusion" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0050699 "WW domain binding" evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA] [GO:2000758 "positive regulation of peptidyl-lysine acetylation" evidence=IEA] InterPro:IPR004826 InterPro:IPR004827 InterPro:IPR008917 Pfam:PF03131 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 GO:GO:0005634 GO:GO:0015629 GO:GO:0043565 GO:GO:0007267 GO:GO:0003700 GO:GO:0060716 TreeFam:TF326681 Gene3D:1.10.880.10 SUPFAM:SSF47454 GeneTree:ENSGT00550000074399 GO:GO:0030502 OrthoDB:EOG715Q3N OMA:PTDKIVN GO:GO:0034242 GO:GO:2000758 EMBL:CU466514 Ensembl:ENSSSCT00000000310 Uniprot:F1SR55) HSP 1 Score: 49.2914 bits (116), Expect = 2.838e-5 Identity = 50/204 (24.51%), Postives = 89/204 (43.63%), Query Frame = 0 Query: 168 PLLLLD-----ASSKSEAFPSSESSFVVTAANSSSIEYKKQSSSPSTSSSTNM--ISNPTSTSSNN------------PPLSITKKQKTPKSTPKAQQKVSSSTSPRKRKKEDNLLPKNSKFSKYEIVDTSIDTFNKLLEKMP--KEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEEC 350 PL LLD SK + P S+S + +++ S+E + + S M + P S N+ P L++ ++ P A+ + S + E L F +IV+ +D FN+LL + P + Q L++D RR+GKN+ AA+ R R+++ ++Q + + L ++ L+R E Sbjct: 122 PLALLDIGLSAGPSKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVEMYPVEYPYSLMPNSLAHPNYALPPAEPSLALEPSSGPVRAKPTARGEAGS-------RDERRALAMKIPFPTDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLET----IVQLERELERLGSERERLLRARGEA 314
BLAST of EMLSAG00000000583 vs. GO
Match: - (symbol:Nfe2 "Transcription factor NF-E2 45 kDa subunit" species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0030502 "negative regulation of bone mineralization" evidence=IEA] [GO:0034242 "negative regulation of syncytium formation by plasma membrane fusion" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0050699 "WW domain binding" evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA] [GO:2000758 "positive regulation of peptidyl-lysine acetylation" evidence=IEA] InterPro:IPR004826 InterPro:IPR004827 InterPro:IPR008917 Pfam:PF03131 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 RGD:1306888 GO:GO:0005737 GO:GO:0015629 GO:GO:0016605 GO:GO:0043565 GO:GO:0007267 GO:GO:0003700 GO:GO:0006351 GO:GO:0060716 Gene3D:1.10.880.10 SUPFAM:SSF47454 GeneTree:ENSGT00550000074399 GO:GO:0030502 OrthoDB:EOG715Q3N HOGENOM:HOG000234410 CTD:4778 eggNOG:NOG326795 HOVERGEN:HBG002901 KO:K09039 OMA:PTDKIVN GO:GO:0034242 GO:GO:2000758 EMBL:BC078925 RefSeq:NP_001012224.1 RefSeq:XP_006242493.1 RefSeq:XP_006242494.1 RefSeq:XP_006242495.1 UniGene:Rn.137607 ProteinModelPortal:Q6AYT2 STRING:10116.ENSRNOP00000052156 PaxDb:Q6AYT2 PRIDE:Q6AYT2 Ensembl:ENSRNOT00000055281 GeneID:366998 KEGG:rno:366998 UCSC:RGD:1306888 InParanoid:Q6AYT2 NextBio:690433 PRO:PR:Q6AYT2 Genevestigator:Q6AYT2 Uniprot:Q6AYT2) HSP 1 Score: 49.2914 bits (116), Expect = 3.000e-5 Identity = 52/202 (25.74%), Postives = 89/202 (44.06%), Query Frame = 0 Query: 168 PLLLLD-----ASSKSEAFPSSESSFVVTAANSSSIEYKKQSSSPSTSSSTNM--ISNPTSTSSNNPPLSITKKQKTPKSTPKAQQKVSSSTSPRKRK----------KEDNLLPKNSKFSKYEIVDTSIDTFNKLLEKMP--KEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEEC 350 PL LLD K + P S+S + +++ S+E + + S +M + P S N+ L+ P TP + SS+ P + K E L F +IV+ +D FN+LL + P + Q L++D RR+GKN+ AA+ R R+++ ++Q + + L ++ L+R E Sbjct: 123 PLALLDIGLPVGQPKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVDMYPVEYPYSLMPNS--LAHPNYTLPPTETPLV---LESSSGPVRAKPAVRGEAGSRDERRALAMKIPFPTDKIVNLPVDDFNELLAQYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLET----IVQLERELERLGSERERLLRARGEA 315
BLAST of EMLSAG00000000583 vs. GO
Match: - (symbol:Nfe2 "nuclear factor, erythroid 2" species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA;ISO] [GO:0015629 "actin cytoskeleton" evidence=IEA;ISO] [GO:0016605 "PML body" evidence=IEA] [GO:0030502 "negative regulation of bone mineralization" evidence=IEA;ISO] [GO:0034242 "negative regulation of syncytium formation by plasma membrane fusion" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA;ISO] [GO:0050699 "WW domain binding" evidence=IEA;ISO] [GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA;ISO] [GO:2000758 "positive regulation of peptidyl-lysine acetylation" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR004826 InterPro:IPR004827 InterPro:IPR008917 Pfam:PF03131 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 RGD:1306888 GO:GO:0005737 GO:GO:0015629 GO:GO:0016605 GO:GO:0043565 GO:GO:0007267 GO:GO:0003700 GO:GO:0006351 GO:GO:0060716 Gene3D:1.10.880.10 SUPFAM:SSF47454 GeneTree:ENSGT00550000074399 GO:GO:0030502 OrthoDB:EOG715Q3N HOGENOM:HOG000234410 CTD:4778 eggNOG:NOG326795 HOVERGEN:HBG002901 KO:K09039 OMA:PTDKIVN GO:GO:0034242 GO:GO:2000758 EMBL:BC078925 RefSeq:NP_001012224.1 RefSeq:XP_006242493.1 RefSeq:XP_006242494.1 RefSeq:XP_006242495.1 UniGene:Rn.137607 ProteinModelPortal:Q6AYT2 STRING:10116.ENSRNOP00000052156 PaxDb:Q6AYT2 PRIDE:Q6AYT2 Ensembl:ENSRNOT00000055281 GeneID:366998 KEGG:rno:366998 UCSC:RGD:1306888 InParanoid:Q6AYT2 NextBio:690433 PRO:PR:Q6AYT2 Genevestigator:Q6AYT2 Uniprot:Q6AYT2) HSP 1 Score: 49.2914 bits (116), Expect = 3.000e-5 Identity = 52/202 (25.74%), Postives = 89/202 (44.06%), Query Frame = 0 Query: 168 PLLLLD-----ASSKSEAFPSSESSFVVTAANSSSIEYKKQSSSPSTSSSTNM--ISNPTSTSSNNPPLSITKKQKTPKSTPKAQQKVSSSTSPRKRK----------KEDNLLPKNSKFSKYEIVDTSIDTFNKLLEKMP--KEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEEC 350 PL LLD K + P S+S + +++ S+E + + S +M + P S N+ L+ P TP + SS+ P + K E L F +IV+ +D FN+LL + P + Q L++D RR+GKN+ AA+ R R+++ ++Q + + L ++ L+R E Sbjct: 123 PLALLDIGLPVGQPKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVDMYPVEYPYSLMPNS--LAHPNYTLPPTETPLV---LESSSGPVRAKPAVRGEAGSRDERRALAMKIPFPTDKIVNLPVDDFNELLAQYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLET----IVQLERELERLGSERERLLRARGEA 315
BLAST of EMLSAG00000000583 vs. GO
Match: - (symbol:MAFB "Transcription factor MafB" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription factor complex" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0007379 "segment specification" evidence=IEA] [GO:0007423 "sensory organ development" evidence=TAS] [GO:0007585 "respiratory gaseous exchange" evidence=IEA] [GO:0008134 "transcription factor binding" evidence=IDA] [GO:0021571 "rhombomere 5 development" evidence=IEA] [GO:0021572 "rhombomere 6 development" evidence=IEA] [GO:0033077 "T cell differentiation in thymus" evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045647 "negative regulation of erythrocyte differentiation" evidence=IDA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0048538 "thymus development" evidence=IEA] InterPro:IPR004826 InterPro:IPR004827 InterPro:IPR008917 InterPro:IPR024874 InterPro:IPR028571 Pfam:PF03131 PROSITE:PS50217 SMART:SM00338 GO:GO:0005634 EMBL:CH471077 GO:GO:0007423 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0042472 GO:GO:0007585 GO:GO:0033077 GO:GO:0048538 GO:GO:0007379 GO:GO:0008134 Gene3D:1.10.880.10 SUPFAM:SSF47454 GO:GO:0035284 GO:GO:0021571 GO:GO:0021572 GO:GO:0045647 HOVERGEN:HBG000313 InterPro:IPR013592 PANTHER:PTHR10129 Pfam:PF08383 eggNOG:NOG241084 HOGENOM:HOG000261683 OrthoDB:EOG7BGHMQ TreeFam:TF325689 CTD:9935 KO:K09036 PANTHER:PTHR10129:SF10 OMA:HPHHGYP EMBL:AF134157 EMBL:AK027324 EMBL:AL035665 EMBL:BC028098 EMBL:BC036689 RefSeq:NP_005452.2 UniGene:Hs.169487 ProteinModelPortal:Q9Y5Q3 SMR:Q9Y5Q3 BioGrid:115261 IntAct:Q9Y5Q3 STRING:9606.ENSP00000362410 PhosphoSite:Q9Y5Q3 DMDM:21759268 PaxDb:Q9Y5Q3 PRIDE:Q9Y5Q3 Ensembl:ENST00000373313 Ensembl:ENST00000396967 GeneID:9935 KEGG:hsa:9935 UCSC:uc002xji.3 GeneCards:GC20M039314 HGNC:HGNC:6408 HPA:HPA005653 MIM:166300 MIM:608968 neXtProt:NX_Q9Y5Q3 Orphanet:2774 PharmGKB:PA30535 InParanoid:Q9Y5Q3 PhylomeDB:Q9Y5Q3 ChiTaRS:MAFB GeneWiki:MAFB_(gene) GenomeRNAi:9935 NextBio:37480 PRO:PR:Q9Y5Q3 Bgee:Q9Y5Q3 CleanEx:HS_MAFB Genevestigator:Q9Y5Q3 Uniprot:Q9Y5Q3) HSP 1 Score: 48.9062 bits (115), Expect = 3.313e-5 Identity = 29/94 (30.85%), Postives = 51/94 (54.26%), Query Frame = 0 Query: 269 KFSKYEIVDTSIDTFNKLLEKMPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEE-------CKVWAN 355 +FS ++V S+ N+ L K++ + LK RR KNRG A+ R +R++Q +HL +K ++ +++ + E+ RL E C+ AN Sbjct: 210 RFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLAN 303
BLAST of EMLSAG00000000583 vs. GO
Match: - (symbol:Mafb "v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)" species:10090 "Mus musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription factor complex" evidence=IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA] [GO:0007379 "segment specification" evidence=IMP] [GO:0007585 "respiratory gaseous exchange" evidence=IMP] [GO:0008134 "transcription factor binding" evidence=ISO] [GO:0021571 "rhombomere 5 development" evidence=IMP] [GO:0021572 "rhombomere 6 development" evidence=IMP] [GO:0033077 "T cell differentiation in thymus" evidence=IMP] [GO:0035284 "brain segmentation" evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045647 "negative regulation of erythrocyte differentiation" evidence=ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA] [GO:0048538 "thymus development" evidence=IMP] InterPro:IPR004826 InterPro:IPR004827 InterPro:IPR008917 InterPro:IPR024874 InterPro:IPR028571 Pfam:PF03131 PROSITE:PS50217 SMART:SM00338 MGI:MGI:104555 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 EMBL:CH466551 GO:GO:0005667 GO:GO:0042472 GO:GO:0007585 GO:GO:0033077 GO:GO:0048538 GO:GO:0007379 Gene3D:1.10.880.10 SUPFAM:SSF47454 GO:GO:0035284 GO:GO:0021571 GO:GO:0021572 PDB:2WT7 PDBsum:2WT7 GO:GO:0045647 CleanEx:MM_MAF1 HOVERGEN:HBG000313 InterPro:IPR013592 PANTHER:PTHR10129 Pfam:PF08383 eggNOG:NOG241084 HOGENOM:HOG000261683 OrthoDB:EOG7BGHMQ TreeFam:TF325689 GeneTree:ENSGT00550000074549 CTD:9935 KO:K09036 PANTHER:PTHR10129:SF10 OMA:HPHHGYP ChiTaRS:MAFB EMBL:L36435 EMBL:AF180338 EMBL:AK132425 EMBL:AK143209 EMBL:AK154830 EMBL:AL591665 EMBL:BC016434 EMBL:BC038256 PIR:I49529 RefSeq:NP_034788.1 UniGene:Mm.330745 PDB:2WTY PDB:4AUW PDBsum:2WTY PDBsum:4AUW ProteinModelPortal:P54841 SMR:P54841 BioGrid:201014 PhosphoSite:P54841 PRIDE:P54841 Ensembl:ENSMUST00000099126 GeneID:16658 KEGG:mmu:16658 UCSC:uc008nqw.2 InParanoid:Q3U3C8 NextBio:290353 PRO:PR:P54841 ArrayExpress:P54841 Bgee:P54841 Genevestigator:P54841 Uniprot:P54841) HSP 1 Score: 48.9062 bits (115), Expect = 3.403e-5 Identity = 29/94 (30.85%), Postives = 51/94 (54.26%), Query Frame = 0 Query: 269 KFSKYEIVDTSIDTFNKLLEKMPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEE-------CKVWAN 355 +FS ++V S+ N+ L K++ + LK RR KNRG A+ R +R++Q +HL +K ++ +++ + E+ RL E C+ AN Sbjct: 210 RFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLAN 303
BLAST of EMLSAG00000000583 vs. GO
Match: - (symbol:Nrl "Neural retina leucine zipper gene (Predicted)" species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043522 "leucine zipper domain binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive regulation of rhodopsin gene expression" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046548 "retinal rod cell development" evidence=IEA] InterPro:IPR004826 InterPro:IPR004827 InterPro:IPR008917 InterPro:IPR024874 InterPro:IPR028575 Pfam:PF03131 PROSITE:PS50217 SMART:SM00338 RGD:1305197 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0046548 Gene3D:1.10.880.10 SUPFAM:SSF47454 EMBL:CH474049 GO:GO:0045872 InterPro:IPR013592 PANTHER:PTHR10129 Pfam:PF08383 OrthoDB:EOG7BGHMQ TreeFam:TF325689 GeneTree:ENSGT00550000074549 CTD:4901 KO:K09038 OMA:GDHAHFF PANTHER:PTHR10129:SF5 EMBL:AABR06083265 RefSeq:NP_001099506.1 RefSeq:XP_006251997.1 RefSeq:XP_006251998.1 RefSeq:XP_006251999.1 UniGene:Rn.231129 Ensembl:ENSRNOT00000024991 GeneID:290221 KEGG:rno:290221 UCSC:RGD:1305197 NextBio:630751 PRO:PR:D4ACF4 Uniprot:D4ACF4) HSP 1 Score: 48.521 bits (114), Expect = 3.433e-5 Identity = 31/110 (28.18%), Postives = 54/110 (49.09%), Query Frame = 0 Query: 251 STSPRKRKKEDNLLPKNSKFSKYEIVDTSIDTFNKLLEKMPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEECKVWANLVDAI 360 S SP + + LP+ +FS +V S+ N+ L +++ + LK RR KNRG A+ R +R++Q L ++ + +L A E+ RL E ++ D + Sbjct: 116 SGSPGETGAPNVQLPE--RFSDAALVSMSVRELNRQLRGCGRDEALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALRAEVARLARERDLYKARCDRL 223
BLAST of EMLSAG00000000583 vs. GO
Match: - (symbol:Nrl "neural retina leucine zipper" species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISO] [GO:0007468 "regulation of rhodopsin gene expression" evidence=ISO] [GO:0043522 "leucine zipper domain binding" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive regulation of rhodopsin gene expression" evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046548 "retinal rod cell development" evidence=IEA;ISO] InterPro:IPR004826 InterPro:IPR004827 InterPro:IPR008917 InterPro:IPR024874 InterPro:IPR028575 Pfam:PF03131 PROSITE:PS50217 SMART:SM00338 RGD:1305197 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0046548 Gene3D:1.10.880.10 SUPFAM:SSF47454 EMBL:CH474049 GO:GO:0045872 InterPro:IPR013592 PANTHER:PTHR10129 Pfam:PF08383 OrthoDB:EOG7BGHMQ TreeFam:TF325689 GeneTree:ENSGT00550000074549 CTD:4901 KO:K09038 OMA:GDHAHFF PANTHER:PTHR10129:SF5 EMBL:AABR06083265 RefSeq:NP_001099506.1 RefSeq:XP_006251997.1 RefSeq:XP_006251998.1 RefSeq:XP_006251999.1 UniGene:Rn.231129 Ensembl:ENSRNOT00000024991 GeneID:290221 KEGG:rno:290221 UCSC:RGD:1305197 NextBio:630751 PRO:PR:D4ACF4 Uniprot:D4ACF4) HSP 1 Score: 48.521 bits (114), Expect = 3.433e-5 Identity = 31/110 (28.18%), Postives = 54/110 (49.09%), Query Frame = 0 Query: 251 STSPRKRKKEDNLLPKNSKFSKYEIVDTSIDTFNKLLEKMPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEECKVWANLVDAI 360 S SP + + LP+ +FS +V S+ N+ L +++ + LK RR KNRG A+ R +R++Q L ++ + +L A E+ RL E ++ D + Sbjct: 116 SGSPGETGAPNVQLPE--RFSDAALVSMSVRELNRQLRGCGRDEALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALRAEVARLARERDLYKARCDRL 223
BLAST of EMLSAG00000000583 vs. GO
Match: - (symbol:Mafb "Transcription factor MafB" species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription factor complex" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0007379 "segment specification" evidence=IEA] [GO:0007585 "respiratory gaseous exchange" evidence=IEA] [GO:0008134 "transcription factor binding" evidence=IEA] [GO:0021571 "rhombomere 5 development" evidence=IEA] [GO:0021572 "rhombomere 6 development" evidence=IEA] [GO:0033077 "T cell differentiation in thymus" evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045647 "negative regulation of erythrocyte differentiation" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0048538 "thymus development" evidence=IEA] InterPro:IPR004826 InterPro:IPR004827 InterPro:IPR008917 InterPro:IPR024874 InterPro:IPR028571 Pfam:PF03131 PROSITE:PS50217 SMART:SM00338 RGD:2982 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0042472 GO:GO:0007585 GO:GO:0033077 GO:GO:0048538 GO:GO:0007379 Gene3D:1.10.880.10 SUPFAM:SSF47454 GO:GO:0035284 GO:GO:0021571 GO:GO:0021572 GO:GO:0045647 HOVERGEN:HBG000313 InterPro:IPR013592 PANTHER:PTHR10129 Pfam:PF08383 eggNOG:NOG241084 HOGENOM:HOG000261683 OrthoDB:EOG7BGHMQ TreeFam:TF325689 GeneTree:ENSGT00550000074549 CTD:9935 KO:K09036 PANTHER:PTHR10129:SF10 OMA:HPHHGYP EMBL:U56241 RefSeq:NP_062189.1 UniGene:Rn.10725 ProteinModelPortal:P54842 SMR:P54842 STRING:10116.ENSRNOP00000021452 Ensembl:ENSRNOT00000021452 GeneID:54264 KEGG:rno:54264 UCSC:RGD:2982 InParanoid:P54842 NextBio:610798 PRO:PR:P54842 Genevestigator:P54842 Uniprot:P54842) HSP 1 Score: 48.9062 bits (115), Expect = 3.589e-5 Identity = 29/94 (30.85%), Postives = 51/94 (54.26%), Query Frame = 0 Query: 269 KFSKYEIVDTSIDTFNKLLEKMPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEE-------CKVWAN 355 +FS ++V S+ N+ L K++ + LK RR KNRG A+ R +R++Q +HL +K ++ +++ + E+ RL E C+ AN Sbjct: 210 RFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLAN 303
BLAST of EMLSAG00000000583 vs. C. finmarchicus
Match: gi|592916286|gb|GAXK01042089.1| (TSA: Calanus finmarchicus comp4857730_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 7.648e+0 Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 0 Query: 329 KKEVCKELRAKETELMRLEEECKVWAN 355 K ++CK+L+A E E+ RLEEE V N Sbjct: 162 KNDICKKLKASENEVSRLEEEIHVLKN 242
BLAST of EMLSAG00000000583 vs. L. salmonis peptides
Match: EMLSAP00000000583 (pep:novel supercontig:LSalAtl2s:LSalAtl2s109:1047061:1051341:1 gene:EMLSAG00000000583 transcript:EMLSAT00000000583 description:"snap_masked-LSalAtl2s109-processed-gene-10.5") HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0 Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0 Query: 1 MIATNLRMIINNSYFFTLLECKDCRLVNNSVRINSYKYGPSFGKSDFTEESAQWEXKPFEPSKTSQAGPYILRSDLSGTHPNIYPRVALVKNPTTVEPAAVPVPHSPSFQLQTKQLTSSVIQNPDEKISVHLIAATAVTTNVSGSVGLYSLSHDDCAIQGHYNQEETPLLLLDASSKSEAFPSSESSFVVTAANSSSIEYKKQSSSPSTSSSTNMISNPTSTSSNNPPLSITKKQKTPKSTPKAQQKVSSSTSPRKRKKEDNLLPKNSKFSKYEIVDTSIDTFNKLLEKMPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEECKVWANLVDAINYHVDRIKSKL 371 MIATNLRMIINNSYFFTLLECKDCRLVNNSVRINSYKYGPSFGKSDFTEESAQWEXKPFEPSKTSQAGPYILRSDLSGTHPNIYPRVALVKNPTTVEPAAVPVPHSPSFQLQTKQLTSSVIQNPDEKISVHLIAATAVTTNVSGSVGLYSLSHDDCAIQGHYNQEETPLLLLDASSKSEAFPSSESSFVVTAANSSSIEYKKQSSSPSTSSSTNMISNPTSTSSNNPPLSITKKQKTPKSTPKAQQKVSSSTSPRKRKKEDNLLPKNSKFSKYEIVDTSIDTFNKLLEKMPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEECKVWANLVDAINYHVDRIKSKL Sbjct: 1 MIATNLRMIINNSYFFTLLECKDCRLVNNSVRINSYKYGPSFGKSDFTEESAQWEXKPFEPSKTSQAGPYILRSDLSGTHPNIYPRVALVKNPTTVEPAAVPVPHSPSFQLQTKQLTSSVIQNPDEKISVHLIAATAVTTNVSGSVGLYSLSHDDCAIQGHYNQEETPLLLLDASSKSEAFPSSESSFVVTAANSSSIEYKKQSSSPSTSSSTNMISNPTSTSSNNPPLSITKKQKTPKSTPKAQQKVSSSTSPRKRKKEDNLLPKNSKFSKYEIVDTSIDTFNKLLEKMPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEECKVWANLVDAINYHVDRIKSKL 371
BLAST of EMLSAG00000000583 vs. L. salmonis peptides
Match: EMLSAP00000002525 (pep:novel supercontig:LSalAtl2s:LSalAtl2s149:735162:736316:-1 gene:EMLSAG00000002525 transcript:EMLSAT00000002525 description:"maker-LSalAtl2s149-augustus-gene-6.19") HSP 1 Score: 80.1073 bits (196), Expect = 5.819e-17 Identity = 48/140 (34.29%), Postives = 75/140 (53.57%), Query Frame = 0 Query: 230 SITKKQKTPKSTPKAQQKVSSSTSPRKRKKEDNLLPKNSKFSKYEIVDTSIDTFNKLLEK--MPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELMRLEEECKVWANLVDAINYHVDRI 367 S+ K+ + S ++ SS + ++ K+E +LP + +K +I+ ID FN L + +E+ LKD+RRKGKNR AARR+RD R+++ L +K V KE + E E+CK W + D YH+ R Sbjct: 177 SLGDKRFSSSSIDPSRTXASSPPAMKRYKRERLVLPTSCTLTKDQIIHMPIDQFNDYLARSNFTEEELSRLKDARRKGKNRVAARRSRDHRLREVQLLKSRKIRVVKEKSQVDEEYENSIEDCKSWERIYDLFQYHIKRF 316
BLAST of EMLSAG00000000583 vs. L. salmonis peptides
Match: EMLSAP00000007677 (pep:novel supercontig:LSalAtl2s:LSalAtl2s447:299081:307910:-1 gene:EMLSAG00000007677 transcript:EMLSAT00000007677 description:"maker-LSalAtl2s447-snap-gene-3.23") HSP 1 Score: 51.6026 bits (122), Expect = 1.747e-7 Identity = 32/96 (33.33%), Postives = 54/96 (56.25%), Query Frame = 0 Query: 275 IVDTSIDTFNKLLEK--MPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELRAKETELM----RLEEECKVWANLVDAINYHV 364 I++ +D FN LL K + +EQ L +D RR+GKN+ AAR R R+I Q + Q ++ +R ++TEL+ +L W ++V ++ +V Sbjct: 331 IINLPMDEFNDLLSKHELTEEQLTLCRDIRRRGKNKVAARNCRKRKIDQ----IKQLEDDVTRIRCRKTELVQEHXKLSSXRSHWTDMVKRLHDYV 422
BLAST of EMLSAG00000000583 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold45_size475391-snap-gene-3.20 (protein:Tk10522 transcript:maker-scaffold45_size475391-snap-gene-3.20-mRNA-1 annotation:"neuroglian isoform x1") HSP 1 Score: 66.2402 bits (160), Expect = 5.480e-12 Identity = 52/157 (33.12%), Postives = 79/157 (50.32%), Query Frame = 0 Query: 200 YKKQSSSPSTSS-STNMISNPTST---SSNNPPLSITKKQKTPKSTPKAQQKVSSSTSPRKRKKEDN-------------LLPKNSKFSKYEIVDTSIDTFNKLLEK--MPKEQRMLLKDSRRKGKNRGAARRARDRRIKQHNHLMIQKKEVCKELR 337 Y S SPS S S+ SNP S S +NP ++ +T + P + S ++ P K + L+P + ++ +IVD +D+FN L+ K +E+ KD RRKGKNR AA+R+R +I+Q N L +Q +E +ELR Sbjct: 763 YTDSSCSPSDSGCSSGRTSNPISPQVDSPHNPIPGPSQGFETRRKQPSGSRTSSINSGPSGSKNGERRGGRPSTRSCLNKLIPADCPLNEEQIVDLDMDSFNDLMGKHHFTEEKISYFKDLRRKGKNRQAAKRSRKNKIEQLNGLRVQTQEQEQELR 919 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000583 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000583 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000000583 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000000583 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000583 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000583 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000583 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s109:1047061..1051341+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000583-683349 ID=EMLSAG00000000583-683349|Name=EMLSAG00000000583|organism=Lepeophtheirus salmonis|type=gene|length=4281bp|location=Sequence derived from alignment at LSalAtl2s109:1047061..1051341+ (Lepeophtheirus salmonis)back to top Add to Basket
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