EMLSAG00000000637, EMLSAG00000000637-683403 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000000637
Unique Name	EMLSAG00000000637-683403
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:NSUN4 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005762 "mitochondrial large ribosomal subunit" evidence=IEA] Pfam:PF01189 GO:GO:0005762 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341 OrthoDB:EOG789CB3 TreeFam:TF321304 CTD:387338 OMA:ACSPNLR EMBL:CU694667 RefSeq:XP_003128070.1 UniGene:Ssc.37517 Ensembl:ENSSSCT00000004317 GeneID:100524686 KEGG:ssc:100524686 Uniprot:F1S3W1)

HSP 1 Score: 46.2098 bits (108), Expect = 8.939e-6
Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIK 58
            + LL  KPGG+VVYSTCSLS  QN+ VV  +++ L      ++S+ VQ++
Sbjct:  293 AGLLATKPGGHVVYSTCSLSHLQNEYVVQGTIELLAN----QYSIEVQVE 338

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BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:NSUN4 "5-methylcytosine rRNA methyltransferase NSUN4" species:9913 "Bos taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] Pfam:PF01189 GO:GO:0003723 GO:GO:0008168 GO:GO:0005762 GO:GO:0006364 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 PROSITE:PS51686 GeneTree:ENSGT00660000095341 HOGENOM:HOG000017426 HOVERGEN:HBG106892 OrthoDB:EOG789CB3 TreeFam:TF321304 EMBL:BT026151 EMBL:DY454541 RefSeq:NP_001178310.1 UniGene:Bt.36843 ProteinModelPortal:Q0V8R7 STRING:9913.ENSBTAP00000021120 PRIDE:Q0V8R7 Ensembl:ENSBTAT00000021120 GeneID:618779 KEGG:bta:618779 CTD:387338 InParanoid:Q0V8R7 OMA:ACSPNLR NextBio:20901346 Uniprot:Q0V8R7)

HSP 1 Score: 45.8246 bits (107), Expect = 1.164e-5
Identity = 23/50 (46.00%), Postives = 36/50 (72.00%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIK 58
            + LL  KPGG++VYSTCSLS  QN+ VV  ++ EL ++   ++S+ VQ++
Sbjct:  294 AGLLATKPGGHIVYSTCSLSHLQNEYVVQGAI-ELLDN---QYSIKVQVE 339

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BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:NSUN4 "5-methylcytosine rRNA methyltransferase NSUN4" species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] Pfam:PF01189 EMBL:CH471059 GO:GO:0003723 GO:GO:0008168 GO:GO:0005762 GO:GO:0006364 EMBL:AL122001 PDB:4FP9 PDB:4FZV PDBsum:4FP9 PDBsum:4FZV eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 PROSITE:PS51686 HOGENOM:HOG000017426 HOVERGEN:HBG106892 OrthoDB:EOG789CB3 TreeFam:TF321304 CTD:387338 OMA:ACSPNLR EMBL:AK021577 EMBL:AK057420 EMBL:AK291741 EMBL:AK295003 EMBL:BC014441 EMBL:BC016907 RefSeq:NP_001243056.1 RefSeq:NP_001243057.1 RefSeq:NP_950245.2 UniGene:Hs.163424 ProteinModelPortal:Q96CB9 SMR:Q96CB9 BioGrid:132288 DIP:DIP-58104N IntAct:Q96CB9 MINT:MINT-1474456 STRING:9606.ENSP00000419740 PhosphoSite:Q96CB9 DMDM:152125805 PaxDb:Q96CB9 PRIDE:Q96CB9 Ensembl:ENST00000474844 Ensembl:ENST00000536062 Ensembl:ENST00000537428 GeneID:387338 KEGG:hsa:387338 UCSC:uc001cpr.2 GeneCards:GC01P046805 HGNC:HGNC:31802 HPA:HPA027958 HPA:HPA028489 MIM:615394 neXtProt:NX_Q96CB9 PharmGKB:PA134953046 InParanoid:Q96CB9 PhylomeDB:Q96CB9 GenomeRNAi:387338 NextBio:101304 PRO:PR:Q96CB9 ArrayExpress:Q96CB9 Bgee:Q96CB9 CleanEx:HS_NSUN4 Genevestigator:Q96CB9 Uniprot:Q96CB9)

HSP 1 Score: 45.8246 bits (107), Expect = 1.220e-5
Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIK 58
            + LL  KPGG+VVYSTCSLS  QN+ VV  +++ L      ++S+ VQ++
Sbjct:  294 AGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN----QYSIQVQVE 339

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BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:NSUN4 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005762 "mitochondrial large ribosomal subunit" evidence=IEA] Pfam:PF01189 GO:GO:0005762 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341 OrthoDB:EOG789CB3 TreeFam:TF321304 OMA:ACSPNLR EMBL:AAEX03009775 Ensembl:ENSCAFT00000047805 Uniprot:J9P4A4)

HSP 1 Score: 45.4394 bits (106), Expect = 1.724e-5
Identity = 22/50 (44.00%), Postives = 34/50 (68.00%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIK 58
            + LL  KPGG++VYSTCSLS  QN+ VV  +++ L      ++S+ VQ++
Sbjct:  294 AGLLATKPGGHIVYSTCSLSHLQNEYVVQGTIEFLAN----QYSIKVQVE 339

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BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:orf19.518 species:5476 "Candida albicans" [GO:0016428 "tRNA (cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030488 "tRNA methylation" evidence=IEA] InterPro:IPR018314 InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS01153 PROSITE:PS51606 Pfam:PF01189 GO:GO:0003723 EMBL:AACQ01000054 GO:GO:0030488 KO:K15334 OrthoDB:EOG7T1RN4 GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 RefSeq:XP_717471.1 ProteinModelPortal:Q5A6Y3 GeneID:3640854 KEGG:cal:CaO19.8149 CGD:CAL0066137 Uniprot:Q5A6Y3)

HSP 1 Score: 43.8986 bits (102), Expect = 7.307e-5
Identity = 22/54 (40.74%), Postives = 35/54 (64.81%), Query Frame = 0

Query:   10 ALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLN 63
             L  +K GG +VYSTCSLSP +N+ +V ++L++ W D         QI+L+N++
Sbjct:  344 GLQLLKKGGRLVYSTCSLSPIENEAIVASALRK-WGD---------QIRLVNVD 387

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BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:Nsun4 "NOP2/Sun domain family, member 4" species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO] [GO:0008150 "biological_process" evidence=ND] Pfam:PF01189 RGD:1559652 EMBL:CH474008 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341 OrthoDB:EOG789CB3 TreeFam:TF321304 CTD:387338 OMA:ACSPNLR EMBL:AABR06039526 EMBL:AABR06039500 RefSeq:NP_001100148.1 UniGene:Rn.49080 Ensembl:ENSRNOT00000016013 Ensembl:ENSRNOT00000016714 GeneID:298426 KEGG:rno:298426 UCSC:RGD:1559652 NextBio:643659 PRO:PR:D4A099 Uniprot:D4A099)

HSP 1 Score: 43.1282 bits (100), Expect = 9.323e-5
Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQI-------KLINLNYCYI 67
            + LL  KPGG+VVYSTCSLS  QN+ VV  +++ L      ++++ VQ+       KL    +C++
Sbjct:  291 AGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN----QYNIKVQVEDLSHFRKLFMDTFCFL 352

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BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:Nsun4 "NOL1/NOP2/Sun domain family, member 4" species:10090 "Mus musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008150 "biological_process" evidence=ND] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA] Pfam:PF01189 MGI:MGI:1919431 GO:GO:0003723 GO:GO:0008168 GO:GO:0005762 GO:GO:0006364 EMBL:AL627105 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 PROSITE:PS51686 GeneTree:ENSGT00660000095341 HOGENOM:HOG000017426 HOVERGEN:HBG106892 OrthoDB:EOG789CB3 TreeFam:TF321304 CTD:387338 OMA:ACSPNLR EMBL:AK009285 EMBL:AK012994 EMBL:BC024628 RefSeq:NP_082418.1 UniGene:Mm.282560 ProteinModelPortal:Q9CZ57 SMR:Q9CZ57 STRING:10090.ENSMUSP00000030475 PhosphoSite:Q9CZ57 PaxDb:Q9CZ57 PRIDE:Q9CZ57 Ensembl:ENSMUST00000030474 Ensembl:ENSMUST00000030475 GeneID:72181 KEGG:mmu:72181 UCSC:uc008ufu.2 UCSC:uc012djh.1 InParanoid:Q9CZ57 NextBio:335641 PRO:PR:Q9CZ57 Bgee:Q9CZ57 CleanEx:MM_NSUN4 Genevestigator:Q9CZ57 Uniprot:Q9CZ57)

HSP 1 Score: 42.743 bits (99), Expect = 1.454e-4
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQI-------KLINLNYCYI 67
            + LL  KPGG+VVYSTCSLS  QN+ VV  +++ L      ++++ VQ+       KL    +C+ 
Sbjct:  291 AGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN----QYNIKVQVEDLSHFRKLFMDTFCFF 352

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BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:CPAR2_205180 species:5480 "Candida parapsilosis" [GO:0030488 "tRNA methylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016428 "tRNA (cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR018314 InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS01153 PROSITE:PS51606 Pfam:PF01189 GO:GO:0003723 GO:GO:0030488 OrthoDB:EOG7T1RN4 GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 EMBL:HE605206 Uniprot:G8BG91)

HSP 1 Score: 42.3578 bits (98), Expect = 2.066e-4
Identity = 23/54 (42.59%), Postives = 34/54 (62.96%), Query Frame = 0

Query:   10 ALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLN 63
             L  +K GG +VYSTCSLSP +N+ VV  +L+E W D         +IKL++++
Sbjct:  292 GLQLLKKGGRLVYSTCSLSPIENEAVVAEALRE-WGD---------KIKLVDVS 335

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BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:nsun3 "NOP2/Sun domain family, member 3" species:7955 "Danio rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0016740 "transferase activity" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] Pfam:PF01189 ZFIN:ZDB-GENE-050706-95 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341 OMA:GYLHCNE OrthoDB:EOG789CB3 TreeFam:TF321304 EMBL:CR762462 EMBL:CU915566 Ensembl:ENSDART00000131664 PRO:PR:F6NJM6 ArrayExpress:F6NJM6 Bgee:F6NJM6 Uniprot:F6NJM6)

HSP 1 Score: 40.4318 bits (93), Expect = 7.759e-4
Identity = 19/32 (59.38%), Postives = 23/32 (71.88%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASL 40
            SAL  V+PGG VVYSTC++S A+N  VV   L
Sbjct:  288 SALAAVRPGGIVVYSTCTMSRAENQSVVEEVL 319

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BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592781683|gb|GAXK01172885.1| (TSA: Calanus finmarchicus comp132139_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 64.3142 bits (155), Expect = 2.205e-12
Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0

Query:    7 FRSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
             ++ LL + PGG +VYSTC+LSP QNDGVVH  L ++WE+  L+F V
Sbjct:  185 LKAGLLNLAPGGSLVYSTCTLSPVQNDGVVHKVLGQIWEETNLDFEV 325

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BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592777904|gb|GAXK01176664.1| (TSA: Calanus finmarchicus comp3612_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 3.974e-3
Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = 0

Query:   15 KPGGYVVYSTCSLSPAQNDGVVHASLKE 42
            K GGY+VYSTCS+ P +N+ VV   L++
Sbjct: 1516 KTGGYLVYSTCSILPEENENVVDYVLRK 1599

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BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592941039|gb|GAXK01017514.1| (TSA: Calanus finmarchicus comp73214_c11_seq1 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 6.840e-3
Identity = 27/71 (38.03%), Postives = 37/71 (52.11%), Query Frame = 0

Query:    8 RSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLE 78
            R AL  +  GG +VYSTCS  P +N+ VV   L+++    QL     V++K        +L  LNSS  LE
Sbjct:  966 RRALEMLAVGGRMVYSTCSFHPLENEAVVARLLQDMEGRLQL-----VEVK-------DMLPGLNSSPGLE 1142

[Close]

BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592941040|gb|GAXK01017513.1| (TSA: Calanus finmarchicus comp73214_c3_seq2 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 7.783e-3
Identity = 27/71 (38.03%), Postives = 37/71 (52.11%), Query Frame = 0

Query:    8 RSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLE 78
            R AL  +  GG +VYSTCS  P +N+ VV   L+++    QL     V++K        +L  LNSS  LE
Sbjct: 1021 RRALEMLAVGGRMVYSTCSFHPLENEAVVARLLQDMEGRLQL-----VEVK-------DMLPGLNSSPGLE 1197

[Close]

BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592941041|gb|GAXK01017512.1| (TSA: Calanus finmarchicus comp73214_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 7.848e-3
Identity = 27/71 (38.03%), Postives = 37/71 (52.11%), Query Frame = 0

Query:    8 RSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLE 78
            R AL  +  GG +VYSTCS  P +N+ VV   L+++    QL     V++K        +L  LNSS  LE
Sbjct: 1021 RRALEMLAVGGRMVYSTCSFHPLENEAVVARLLQDMEGRLQL-----VEVK-------DMLPGLNSSPGLE 1197

[Close]

BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592776073|gb|GAXK01178495.1| (TSA: Calanus finmarchicus comp15396_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 8.389e-3
Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 0

Query:   17 GGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNY 64
            GG +VYSTCS +P +++ V+   L+E  +  +L   V ++ KL  L Y
Sbjct:   12 GGRMVYSTCSFNPIEDEAVLARILQETGDSVRL---VEIKDKLPGLKY 146

[Close]

BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592776075|gb|GAXK01178493.1| (TSA: Calanus finmarchicus comp15396_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 9.063e-3
Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 0

Query:   17 GGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNY 64
            GG +VYSTCS +P +++ V+   L+E  +  +L   V ++ KL  L Y
Sbjct:   12 GGRMVYSTCSFNPIEDEAVLARILQETGDSVRL---VEIKDKLPGLKY 146

[Close]

BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592776074|gb|GAXK01178494.1| (TSA: Calanus finmarchicus comp15396_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 4.719e-2
Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 0

Query:   17 GGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNY 64
            GG +VYSTCS +P +++ V+   L+E  +  +L   V ++ KL  L Y
Sbjct:   70 GGRMVYSTCSFNPIEDEAVLARILQETGDSVRL---VEIKDKLPGLKY 204

[Close]

BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592776076|gb|GAXK01178492.1| (TSA: Calanus finmarchicus comp15396_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 4.972e-2
Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 0

Query:   17 GGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNY 64
            GG +VYSTCS +P +++ V+   L+E  +  +L   V ++ KL  L Y
Sbjct:   70 GGRMVYSTCSFNPIEDEAVLARILQETGDSVRL---VEIKDKLPGLKY 204

[Close]

BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592776063|gb|GAXK01178505.1| (TSA: Calanus finmarchicus comp15396_c5_seq2 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 5.150e-2
Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 0

Query:   17 GGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNY 64
            GG +VYSTCS +P +++ V+   L+E  +  +L   V ++ KL  L Y
Sbjct: 1436 GGRMVYSTCSFNPIEDEAVLARILQETGDSVRL---VEIKDKLPGLKY 1570

[Close]

BLAST of EMLSAG00000000637 vs. L. salmonis peptides
Match: EMLSAP00000000637 (pep:novel supercontig:LSalAtl2s:LSalAtl2s109:658751:659155:-1 gene:EMLSAG00000000637 transcript:EMLSAT00000000637 description:"snap-LSalAtl2s109-processed-gene-6.37")

HSP 1 Score: 171.785 bits (434), Expect = 8.058e-57
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query:    1 MSTNHSFRSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLEYKVYQ 83
            MSTNHSFRSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLEYKVYQ
Sbjct:    1 MSTNHSFRSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLEYKVYQ 83

[Close]

BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: gb|EEC16154.1| (conserved hypothetical protein [Ixodes scapularis])

HSP 1 Score: 65.855 bits (159), Expect = 6.582e-14
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0

Query:   13 CVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            C+ PGG +VYSTCSLSP QNDGVVH +L++LWE   LEF+V
Sbjct:  151 CLLPGGSLVYSTCSLSPIQNDGVVHMALQQLWETTPLEFAV 191

[Close]

BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: gb|EFA08513.1| (5-methylcytosine rRNA methyltransferase NSUN4-like Protein [Tribolium castaneum])

HSP 1 Score: 65.0846 bits (157), Expect = 3.103e-13
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            +AL  VK GG VVYSTCSLSP QNDGVVH +LK +WE+ ++E  V
Sbjct:  368 NALKLVKKGGVVVYSTCSLSPIQNDGVVHMTLKRIWEETKIEVVV 412

[Close]

BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: gb|KFM60440.1| (putative methyltransferase NSUN4, partial [Stegodyphus mimosarum])

HSP 1 Score: 52.7582 bits (125), Expect = 8.421e-10
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            +AL  +K  G +VYSTCSLSP QNDGVVH +L +L  ++  EF V
Sbjct:   13 AALKALKLNGSLVYSTCSLSPLQNDGVVHMALSKLLSESTFEFIV 57

[Close]

BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: EEB16854.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 54.299 bits (129), Expect = 2.371e-9
Identity = 24/48 (50.00%), Postives = 36/48 (75.00%), Query Frame = 0

Query:    6 SFRSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            +  +AL  VKPGG VVY+T ++SP QNDGVV A+++ + E++ + FSV
Sbjct:  417 TLANALKMVKPGGTVVYTTGTMSPVQNDGVVDAAIRMVMENSDMRFSV 464

[Close]

BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: XP_006568521.1 (PREDICTED: 5-methylcytosine rRNA methyltransferase NSUN4 [Apis mellifera])

HSP 1 Score: 52.7582 bits (125), Expect = 6.476e-9
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWED 46
            +AL  V  GG VVYSTCSLSP QNDGVV  +LK+ W++
Sbjct:  412 NALKLVSVGGTVVYSTCSLSPIQNDGVVQVALKKAWQE 449

[Close]

BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: gb|KPM11188.1| (methyltransferase sun-like protein [Sarcoptes scabiei])

HSP 1 Score: 52.7582 bits (125), Expect = 8.437e-9
Identity = 24/42 (57.14%), Postives = 34/42 (80.95%), Query Frame = 0

Query:   10 ALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEF 51
            A+  V+ GG +VYSTCSLSP QNDGVVH ++K+L ++A +E+
Sbjct:  411 AMKSVRVGGTIVYSTCSLSPIQNDGVVHMAIKQL-QNAPVEY 451

[Close]

BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: EAL39544.3 (AGAP008523-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 51.6026 bits (122), Expect = 1.722e-8
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINL 62
            + L  ++PGG +VYSTCSLSP QNDGVVH +L  ++     E  + V IK ++L
Sbjct:  419 NCLKLLRPGGTLVYSTCSLSPVQNDGVVHMALSNVFS----EIGMTVTIKDLSL 468

[Close]

BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: AAF51412.1 (lethal (2) 10685 [Drosophila melanogaster])

HSP 1 Score: 51.2174 bits (121), Expect = 2.750e-8
Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIK 58
            + L  ++PGG +VYSTCSLSP QNDGVVH +L++++     E+ +   IK
Sbjct:  411 NCLRLLRPGGSLVYSTCSLSPIQNDGVVHMALQKVFT----EYGITTTIK 456

[Close]

BLAST of EMLSAG00000000637 vs. nr
Match: gi|646714110|gb|KDR18203.1| (Putative methyltransferase NSUN4 [Zootermopsis nevadensis])

HSP 1 Score: 63.1586 bits (152), Expect = 7.691e-10
Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 0

Query:   10 ALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            AL  V+PGG VVYSTCSLSP QNDGVVH +L+++WE+  ++  V
Sbjct:  439 ALKLVQPGGTVVYSTCSLSPIQNDGVVHMALRKVWEETDIQVVV 482

[Close]

BLAST of EMLSAG00000000637 vs. nr
Match: gi|1059394130|ref|XP_017770916.1| (PREDICTED: 5-methylcytosine rRNA methyltransferase NSUN4 [Nicrophorus vespilloides])

HSP 1 Score: 63.1586 bits (152), Expect = 8.832e-10
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            +AL  V  GG VVYSTCSLSP QNDGVVH +LK LWE+ ++E  V
Sbjct:  385 NALQMVSVGGTVVYSTCSLSPIQNDGVVHMALKRLWEETKIEMVV 429

[Close]

BLAST of EMLSAG00000000637 vs. nr
Match: gi|478263312|gb|ENN81691.1| (hypothetical protein YQE_01897, partial [Dendroctonus ponderosae])

HSP 1 Score: 62.7734 bits (151), Expect = 1.202e-9
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            SAL  VK GG VVYSTCSLSP QNDGVV  +LK++WE++++E  V
Sbjct:  366 SALTLVKKGGIVVYSTCSLSPIQNDGVVGMALKKIWENSKIEIIV 410

[Close]

BLAST of EMLSAG00000000637 vs. nr
Match: gi|1130204457|ref|XP_019773100.1| (PREDICTED: 5-methylcytosine rRNA methyltransferase NSUN4 [Dendroctonus ponderosae] >gi|546681339|gb|ERL91453.1| hypothetical protein D910_08783 [Dendroctonus ponderosae])

HSP 1 Score: 62.7734 bits (151), Expect = 1.208e-9
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            SAL  VK GG VVYSTCSLSP QNDGVV  +LK++WE++++E  V
Sbjct:  391 SALTLVKKGGIVVYSTCSLSPIQNDGVVGMALKKIWENSKIEIIV 435

[Close]

BLAST of EMLSAG00000000637 vs. nr
Match: gi|332373062|gb|AEE61672.1| (unknown [Dendroctonus ponderosae])

HSP 1 Score: 62.7734 bits (151), Expect = 1.208e-9
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            SAL  VK GG VVYSTCSLSP QNDGVV  +LK++WE++++E  V
Sbjct:  391 SALTLVKKGGIVVYSTCSLSPIQNDGVVGMALKKIWENSKIEIIV 435

[Close]

BLAST of EMLSAG00000000637 vs. nr
Match: gi|1133414029|ref|XP_019876396.1| (PREDICTED: 5-methylcytosine rRNA methyltransferase NSUN4 [Aethina tumida])

HSP 1 Score: 62.3882 bits (150), Expect = 1.541e-9
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            +AL  +  GG VVYSTCSLSP QNDGVVH +LK++WE+ + E  V
Sbjct:  388 NALKIINKGGIVVYSTCSLSPIQNDGVVHMALKKIWEETKFEIVV 432

[Close]

BLAST of EMLSAG00000000637 vs. nr
Match: gi|936690474|ref|XP_014223220.1| (PREDICTED: 5-methylcytosine rRNA methyltransferase NSUN4 [Trichogramma pretiosum])

HSP 1 Score: 62.003 bits (149), Expect = 2.283e-9
Identity = 34/62 (54.84%), Postives = 40/62 (64.52%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIK-LINLNYCYILG 69
            +AL  V PGG VVYSTCSLSP QNDGVV  SLK  +E+  + F V  Q + L+ L Y Y  G
Sbjct:  406 NALKIVVPGGTVVYSTCSLSPVQNDGVVQMSLKRAYEEHNVVFVVKDQTRALLPLKYLYNFG 467

[Close]

BLAST of EMLSAG00000000637 vs. nr
Match: gi|405964794|gb|EKC30240.1| (Putative methyltransferase NSUN4 [Crassostrea gigas])

HSP 1 Score: 61.6178 bits (148), Expect = 2.347e-9
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0

Query:   15 KPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            KPGG VVYSTC+LSPAQNDGVVHA++  LW++  ++  V
Sbjct:  284 KPGGTVVYSTCTLSPAQNDGVVHAAMDHLWKETDIDTVV 322

[Close]

BLAST of EMLSAG00000000637 vs. nr
Match: gi|1058020356|gb|JAS13840.1| (hypothetical protein g.19354, partial [Clastoptera arizonana])

HSP 1 Score: 61.2326 bits (147), Expect = 3.430e-9
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53
            SAL  VK GG VVYSTCSLSP QNDGVVH +LK++WE+  ++  V
Sbjct:  225 SALQLVKIGGTVVYSTCSLSPIQNDGVVHMALKKIWEETSVKVIV 269

[Close]

BLAST of EMLSAG00000000637 vs. nr
Match: gi|1016164857|gb|KZC12019.1| (Putative methyltransferase NSUN4 [Dufourea novaeangliae])

HSP 1 Score: 61.2326 bits (147), Expect = 3.833e-9
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0

Query:    9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWE 45
            +AL  V+PGG VVY+TCSLSP QNDGVVH +LK+ WE
Sbjct:  412 NALKLVRPGGTVVYATCSLSPIQNDGVVHVALKKAWE 448

The following BLAST results are available for this feature:

BLAST of EMLSAG00000000637 vs. GO
BLAST of EMLSAG00000000637 vs. C. finmarchicus
BLAST of EMLSAG00000000637 vs. L. salmonis peptides
BLAST of EMLSAG00000000637 vs. SwissProt
BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
BLAST of EMLSAG00000000637 vs. nr
BLAST of EMLSAG00000000637 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000000637 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 9


Match Name	E-value	Identity	Description
-	8.939e-6	46.00	symbol:NSUN4 "Uncharacterized protein" species:982...	[more]
-	1.164e-5	46.00	symbol:NSUN4 "5-methylcytosine rRNA methyltransfer...	[more]
-	1.220e-5	46.00	symbol:NSUN4 "5-methylcytosine rRNA methyltransfer...	[more]
-	1.724e-5	44.00	symbol:NSUN4 "Uncharacterized protein" species:961...	[more]
-	7.307e-5	40.74	symbol:orf19.518 species:5476 "Candida albicans" [...	[more]
-	9.323e-5	37.88	symbol:Nsun4 "NOP2/Sun domain family, member 4" sp...	[more]
-	1.454e-4	37.88	symbol:Nsun4 "NOL1/NOP2/Sun domain family, member ...	[more]
-	2.066e-4	42.59	symbol:CPAR2_205180 species:5480 "Candida parapsil...	[more]
-	7.759e-4	59.38	symbol:nsun3 "NOP2/Sun domain family, member 3" sp...	[more]

BLAST of EMLSAG00000000637 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 18


Match Name	E-value	Identity	Description
gi\|592781683\|gb\|GAXK01172885.1\|	2.205e-12	55.32	TSA: Calanus finmarchicus comp132139_c1_seq1 trans...	[more]
gi\|592777904\|gb\|GAXK01176664.1\|	3.974e-3	53.57	TSA: Calanus finmarchicus comp3612_c0_seq1 transcr...	[more]
gi\|592941039\|gb\|GAXK01017514.1\|	6.840e-3	38.03	TSA: Calanus finmarchicus comp73214_c11_seq1 trans...	[more]
gi\|592941040\|gb\|GAXK01017513.1\|	7.783e-3	38.03	TSA: Calanus finmarchicus comp73214_c3_seq2 transc...	[more]
gi\|592941041\|gb\|GAXK01017512.1\|	7.848e-3	38.03	TSA: Calanus finmarchicus comp73214_c3_seq1 transc...	[more]
gi\|592776073\|gb\|GAXK01178495.1\|	8.389e-3	37.50	TSA: Calanus finmarchicus comp15396_c0_seq4 transc...	[more]
gi\|592776075\|gb\|GAXK01178493.1\|	9.063e-3	37.50	TSA: Calanus finmarchicus comp15396_c0_seq2 transc...	[more]
gi\|592776074\|gb\|GAXK01178494.1\|	4.719e-2	37.50	TSA: Calanus finmarchicus comp15396_c0_seq3 transc...	[more]
gi\|592776076\|gb\|GAXK01178492.1\|	4.972e-2	37.50	TSA: Calanus finmarchicus comp15396_c0_seq1 transc...	[more]
gi\|592776063\|gb\|GAXK01178505.1\|	5.150e-2	37.50	TSA: Calanus finmarchicus comp15396_c5_seq2 transc...	[more]

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BLAST of EMLSAG00000000637 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000000637	8.058e-57	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s109:65875...	[more]

BLAST of EMLSAG00000000637 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 8


Match Name	E-value	Identity	Description
gb\|EEC16154.1\|	6.582e-14	68.29	conserved hypothetical protein [Ixodes scapularis]	[more]
gb\|EFA08513.1\|	3.103e-13	64.44	5-methylcytosine rRNA methyltransferase NSUN4-like...	[more]
gb\|KFM60440.1\|	8.421e-10	55.56	putative methyltransferase NSUN4, partial [Stegody...	[more]
EEB16854.1	2.371e-9	50.00	conserved hypothetical protein [Pediculus humanus ...	[more]
XP_006568521.1	6.476e-9	63.16	PREDICTED: 5-methylcytosine rRNA methyltransferase...	[more]
gb\|KPM11188.1\|	8.437e-9	57.14	methyltransferase sun-like protein [Sarcoptes scab...	[more]
EAL39544.3	1.722e-8	48.15	AGAP008523-PA [Anopheles gambiae str. PEST]	[more]
AAF51412.1	2.750e-8	48.00	lethal (2) 10685 [Drosophila melanogaster]	[more]

BLAST of EMLSAG00000000637 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|646714110\|gb\|KDR18203.1\|	7.691e-10	61.36	Putative methyltransferase NSUN4 [Zootermopsis nev...	[more]
gi\|1059394130\|ref\|XP_017770916.1\|	8.832e-10	64.44	PREDICTED: 5-methylcytosine rRNA methyltransferase...	[more]
gi\|478263312\|gb\|ENN81691.1\|	1.202e-9	64.44	hypothetical protein YQE_01897, partial [Dendrocto...	[more]
gi\|1130204457\|ref\|XP_019773100.1\|	1.208e-9	64.44	PREDICTED: 5-methylcytosine rRNA methyltransferase...	[more]
gi\|332373062\|gb\|AEE61672.1\|	1.208e-9	64.44	unknown [Dendroctonus ponderosae]	[more]
gi\|1133414029\|ref\|XP_019876396.1\|	1.541e-9	60.00	PREDICTED: 5-methylcytosine rRNA methyltransferase...	[more]
gi\|936690474\|ref\|XP_014223220.1\|	2.283e-9	54.84	PREDICTED: 5-methylcytosine rRNA methyltransferase...	[more]
gi\|405964794\|gb\|EKC30240.1\|	2.347e-9	64.10	Putative methyltransferase NSUN4 [Crassostrea giga...	[more]
gi\|1058020356\|gb\|JAS13840.1\|	3.430e-9	64.44	hypothetical protein g.19354, partial [Clastoptera...	[more]
gi\|1016164857\|gb\|KZC12019.1\|	3.833e-9	70.27	Putative methyltransferase NSUN4 [Dufourea novaean...	[more]

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BLAST of EMLSAG00000000637 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s109	supercontig	LSalAtl2s109:658751..659155 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap-LSalAtl2s109-processed-gene-6.37
Biotype	protein_coding
Evidence	IEA
Note	PREDICTED: 5-methylcytosine rRNA methyltransferase NSUN4 [Agrilus planipennis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000000637 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000000637	EMLSAT00000000637-696484	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s109:658751..659155-

gene from alignment at LSalAtl2s109:658751..659155-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000000637-683403 ID=EMLSAG00000000637-683403|Name=EMLSAG00000000637|organism=Lepeophtheirus salmonis|type=gene|length=405bp|location=Sequence derived from alignment at LSalAtl2s109:658751..659155- (Lepeophtheirus salmonis)
ATGTCCACTAATCATTCCTTTAGGTCAGCGCTCTTGTGTGTAAAACCTGG
AGGATATGTTGTTTACTCTACGTGCTCACTATCTCCGGCCCAGAATGATG
GAGTCGTTCACGCTTCTCTGAAAGAACTCTGGGAAGATGCACAATTGGAA
TTCTCTGTCTGGTAATTTGAGAAATATATTTGACCCGTCAATACAAAATC
AAACTAGAGGATGATTATTAATTTTTTGGAGTCTCCACTTATAGTAGCAA
AAATTCATCGTTGCATTTAAAGAACTAGAAATAGATAGATATTTCTATTT
AAAAATCCATATAGGGTCCAAATTAAGCTCATAAATCTAAACTATTGCTA
CATTCTTGGTTATCTCAACTCATCTCAGCAATTAGAATACAAAGTCTACC
AATGA

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