EMLSAG00000000696, EMLSAG00000000696-683462 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000696
Unique NameEMLSAG00000000696-683462
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:Rpap2 "RNA polymerase II associated protein 2" species:10090 "Mus musculus" [GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008420 "CTD phosphatase activity" evidence=ISO] [GO:0009301 "snRNA transcription" evidence=ISO] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0070940 "dephosphorylation of RNA polymerase II C-terminal domain" evidence=ISO] MGI:MGI:2141142 Pfam:PF04181 GO:GO:0005737 GO:GO:0046872 GO:GO:0016591 GO:GO:0009301 GO:GO:0008420 GO:GO:0070940 InterPro:IPR007308 PROSITE:PS51479 CTD:79871 GeneTree:ENSGT00390000017965 HOGENOM:HOG000253960 OMA:IIFRTSC OrthoDB:EOG7XWPQD TreeFam:TF331431 eggNOG:NOG241465 HOVERGEN:HBG080953 EMBL:AK034418 EMBL:AK049889 EMBL:AK145830 EMBL:AK161901 EMBL:AK166574 EMBL:BC021895 RefSeq:NP_001156933.1 RefSeq:NP_001156934.1 RefSeq:NP_659160.2 RefSeq:XP_006534963.1 UniGene:Mm.482420 ProteinModelPortal:Q8VC34 SMR:Q8VC34 PhosphoSite:Q8VC34 PaxDb:Q8VC34 PRIDE:Q8VC34 Ensembl:ENSMUST00000065422 Ensembl:ENSMUST00000112650 Ensembl:ENSMUST00000112651 Ensembl:ENSMUST00000112654 Ensembl:ENSMUST00000112655 GeneID:231571 KEGG:mmu:231571 UCSC:uc008ymn.2 UCSC:uc008ymq.2 InParanoid:Q8VC34 ChiTaRS:RPAP2 NextBio:380622 PRO:PR:Q8VC34 ArrayExpress:Q8VC34 Bgee:Q8VC34 CleanEx:MM_RPAP2 Genevestigator:Q8VC34 Uniprot:Q8VC34)

HSP 1 Score: 120.168 bits (300), Expect = 3.996e-28
Identity = 84/261 (32.18%), Postives = 136/261 (52.11%), Query Frame = 0
Query:   31 SSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPM-IKILGKDYGKYPGEEI-----PLSQAESPEIGDTKSFCDPK----THEEIEDELEKELETLPDVEELIHGVRQILLDI-----SKETILFGRTDMWMDNEKEKEDNSEL 274
            ++ + + +  K+    +R+ ++   + RK + E  A+ IVE+LL+  I  EFL   +E    +    Y DV+DERS++KLCGYPLC   L  +IP+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R++    ERP   ++L K      GE +      ++ A+    G  ++ CDP       E   DE E+       V  L+ G R   +D      +K +I+  +    +D+++ ++  SE+
Sbjct:   23 ATGTKQTRALKRGDASKRQAELEAAIQRKVEFERKAVRIVEQLLEENITEEFL---KECGMFITPAHYSDVVDERSIIKLCGYPLCQKKL-GVIPKQKYRISTKTNKVYDITERKSFCSNFCYRASKFFETQIPKTPVWVREE----ERPPDFQLLKKGQSGSSGEVVQFFRDAVTAADVDGSGALEAQCDPASSSSWSERASDEEEQGF-----VSSLLPGNRPKAVDTRPQPHTKSSIMRKKAAQNVDSKEGEQTVSEV 270          
BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:Rpap2 "RNA polymerase II subunit B1 CTD phosphatase Rpap2" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008420 "CTD phosphatase activity" evidence=ISS] [GO:0009301 "snRNA transcription" evidence=ISS] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0070940 "dephosphorylation of RNA polymerase II C-terminal domain" evidence=ISS] Pfam:PF04181 RGD:1309034 GO:GO:0005737 GO:GO:0046872 GO:GO:0016591 GO:GO:0009301 GO:GO:0008420 GO:GO:0070940 InterPro:IPR007308 PROSITE:PS51479 CTD:79871 GeneTree:ENSGT00390000017965 HOGENOM:HOG000253960 OMA:IIFRTSC OrthoDB:EOG7XWPQD TreeFam:TF331431 eggNOG:NOG241465 HOVERGEN:HBG080953 EMBL:BC088426 RefSeq:NP_001014009.1 RefSeq:XP_006250606.1 UniGene:Rn.49042 STRING:10116.ENSRNOP00000002815 PaxDb:Q5I0E6 PRIDE:Q5I0E6 Ensembl:ENSRNOT00000002815 GeneID:305120 KEGG:rno:305120 UCSC:RGD:1309034 InParanoid:Q5I0E6 NextBio:654102 PRO:PR:Q5I0E6 Genevestigator:Q5I0E6 Uniprot:Q5I0E6)

HSP 1 Score: 119.783 bits (299), Expect = 6.016e-28
Identity = 77/224 (34.38%), Postives = 118/224 (52.68%), Query Frame = 0
Query:   31 SSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPM-IKILGKDYGKYPGEEI-----PLSQAESPEIGDTKSFCDPKT----HEEIEDELEKELETLPDVEELIHGVR 242
            ++ + +    K+    +R+ ++   L RK +SE  A+ +VE+LL+  I  EFL   +E    +    Y DV+DER+++KLCGYPLC   L  +IP+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R++    ERP   ++L K      GE +      ++ A+    G   + C+P +     E   DE   + E    V  L+ G R
Sbjct:   23 ATGTKQTSALKRRDASKRQAELEAALQRKVESERRAVRLVEQLLEENITEEFL---KECGMFITPAHYSDVVDERAIIKLCGYPLCQKKL-GVIPKQKYRISTKTNKVYDITERKSFCSNFCYKASKFFEAQIPKTPVWVREE----ERPPEFQLLKKGQSGCSGEVVQFFRDAVTAADVDAYGAFDAQCEPASSSTWSERASDERASDEEGPGFVSSLLPGNR 238          

HSP 2 Score: 49.2914 bits (116), Expect = 4.808e-5
Identity = 23/63 (36.51%), Postives = 40/63 (63.49%), Query Frame = 0
Query:  285 RTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMI 347
            R ++V  +L  VLP +L    I M DI  +++ L++ F L++ NI+    EWTL+A+V+L ++
Sbjct:  502 RRRIVLEKLSKVLPGLLGPLQITMGDIYTELKNLVQTFRLSNRNIIHKPVEWTLIAVVLLSLL 564          
BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:Rpap2 "RNA polymerase II associated protein 2" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0008420 "CTD phosphatase activity" evidence=ISO;ISS] [GO:0009301 "snRNA transcription" evidence=ISO;ISS] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0070940 "dephosphorylation of RNA polymerase II C-terminal domain" evidence=ISO;ISS] Pfam:PF04181 RGD:1309034 GO:GO:0005737 GO:GO:0046872 GO:GO:0016591 GO:GO:0009301 GO:GO:0008420 GO:GO:0070940 InterPro:IPR007308 PROSITE:PS51479 CTD:79871 GeneTree:ENSGT00390000017965 HOGENOM:HOG000253960 OMA:IIFRTSC OrthoDB:EOG7XWPQD TreeFam:TF331431 eggNOG:NOG241465 HOVERGEN:HBG080953 EMBL:BC088426 RefSeq:NP_001014009.1 RefSeq:XP_006250606.1 UniGene:Rn.49042 STRING:10116.ENSRNOP00000002815 PaxDb:Q5I0E6 PRIDE:Q5I0E6 Ensembl:ENSRNOT00000002815 GeneID:305120 KEGG:rno:305120 UCSC:RGD:1309034 InParanoid:Q5I0E6 NextBio:654102 PRO:PR:Q5I0E6 Genevestigator:Q5I0E6 Uniprot:Q5I0E6)

HSP 1 Score: 119.783 bits (299), Expect = 6.016e-28
Identity = 77/224 (34.38%), Postives = 118/224 (52.68%), Query Frame = 0
Query:   31 SSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPM-IKILGKDYGKYPGEEI-----PLSQAESPEIGDTKSFCDPKT----HEEIEDELEKELETLPDVEELIHGVR 242
            ++ + +    K+    +R+ ++   L RK +SE  A+ +VE+LL+  I  EFL   +E    +    Y DV+DER+++KLCGYPLC   L  +IP+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R++    ERP   ++L K      GE +      ++ A+    G   + C+P +     E   DE   + E    V  L+ G R
Sbjct:   23 ATGTKQTSALKRRDASKRQAELEAALQRKVESERRAVRLVEQLLEENITEEFL---KECGMFITPAHYSDVVDERAIIKLCGYPLCQKKL-GVIPKQKYRISTKTNKVYDITERKSFCSNFCYKASKFFEAQIPKTPVWVREE----ERPPEFQLLKKGQSGCSGEVVQFFRDAVTAADVDAYGAFDAQCEPASSSTWSERASDERASDEEGPGFVSSLLPGNR 238          

HSP 2 Score: 49.2914 bits (116), Expect = 4.808e-5
Identity = 23/63 (36.51%), Postives = 40/63 (63.49%), Query Frame = 0
Query:  285 RTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMI 347
            R ++V  +L  VLP +L    I M DI  +++ L++ F L++ NI+    EWTL+A+V+L ++
Sbjct:  502 RRRIVLEKLSKVLPGLLGPLQITMGDIYTELKNLVQTFRLSNRNIIHKPVEWTLIAVVLLSLL 564          
BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:RPAP2 "Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008420 "CTD phosphatase activity" evidence=IMP] [GO:0009301 "snRNA transcription" evidence=IMP] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0070940 "dephosphorylation of RNA polymerase II C-terminal domain" evidence=IMP] Pfam:PF04181 GO:GO:0005737 GO:GO:0046872 GO:GO:0016591 GO:GO:0009301 GO:GO:0008420 GO:GO:0070940 EMBL:AL451010 InterPro:IPR007308 PROSITE:PS51479 CTD:79871 HOGENOM:HOG000253960 OMA:IIFRTSC OrthoDB:EOG7XWPQD TreeFam:TF331431 eggNOG:NOG241465 EMBL:AK023212 EMBL:BC031070 EMBL:BC039014 RefSeq:NP_079089.2 UniGene:Hs.444421 ProteinModelPortal:Q8IXW5 SMR:Q8IXW5 BioGrid:122959 IntAct:Q8IXW5 STRING:9606.ENSP00000359368 PhosphoSite:Q8IXW5 DMDM:74750745 PaxDb:Q8IXW5 PRIDE:Q8IXW5 DNASU:79871 Ensembl:ENST00000610020 GeneID:79871 KEGG:hsa:79871 UCSC:uc001dot.2 GeneCards:GC01P092764 HGNC:HGNC:25791 HPA:HPA046443 MIM:611476 neXtProt:NX_Q8IXW5 PharmGKB:PA162401981 HOVERGEN:HBG080953 InParanoid:Q8IXW5 PhylomeDB:Q8IXW5 GeneWiki:RPAP2 GenomeRNAi:79871 NextBio:69637 PRO:PR:Q8IXW5 Bgee:Q8IXW5 CleanEx:HS_RPAP2 Genevestigator:Q8IXW5 Uniprot:Q8IXW5)

HSP 1 Score: 119.398 bits (298), Expect = 8.282e-28
Identity = 68/181 (37.57%), Postives = 105/181 (58.01%), Query Frame = 0
Query:   20 AREALKSKSSTSSSSSKK-KPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
             R+A   + S  ++ +K+    K+    +R+ ++   + +K + E  AL IVE+LL+  I  EFL    E    +    Y DV+DERS++KLCGYPLC   L  I+P+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R+++     P  ++L ++   + GEE+ L
Sbjct:   11 GRKAGAPRCSRKAAGTKQTSTLKQEDASKRKAELEAAVRKKIEFERKALHIVEQLLEENITEEFLM---ECGRFITPAHYSDVVDERSIVKLCGYPLCQKKL-GIVPKQKYKISTKTNKVYDITERKSFCSNFCYQASKFFEAQIPKTPVWVREEE---RHPDFQLLKEEQSGHSGEEVQL 184          

HSP 2 Score: 55.8398 bits (133), Expect = 3.786e-7
Identity = 38/126 (30.16%), Postives = 62/126 (49.21%), Query Frame = 0
Query:  228 LETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQ------VVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMI 347
            ++ LP  E L     ++ L I +    F R    +  E  K  +SE H    P + S +Q      +V  +L  VLP +L    I + DI   ++ L++ F LT+ NI+    EWTL+A+V+L ++
Sbjct:  443 IKPLPSYENLKKETEKLNLRIRE----FYRGRYVLGEETTKSQDSEEHDSTFPLIDSSSQNQIRKRIVLEKLSKVLPGLLVPLQITLGDIYTQLKNLVRTFRLTNRNIIHKPAEWTLIAMVLLSLL 564          
BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:RPAP2 "Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2" species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008420 "CTD phosphatase activity" evidence=ISS] [GO:0009301 "snRNA transcription" evidence=ISS] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=ISS] [GO:0070940 "dephosphorylation of RNA polymerase II C-terminal domain" evidence=ISS] Pfam:PF04181 GO:GO:0005737 GO:GO:0046872 GO:GO:0016591 GO:GO:0009301 GO:GO:0008420 GO:GO:0070940 InterPro:IPR007308 PROSITE:PS51479 CTD:79871 HOVERGEN:HBG080953 EMBL:CR859185 RefSeq:NP_001125811.1 UniGene:Pab.7496 PRIDE:Q5RA37 GeneID:100172739 KEGG:pon:100172739 InParanoid:Q5RA37 Uniprot:Q5RA37)

HSP 1 Score: 118.627 bits (296), Expect = 1.311e-27
Identity = 68/181 (37.57%), Postives = 104/181 (57.46%), Query Frame = 0
Query:   20 AREALKSKSSTSSSSSKK-KPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
             R+A   + S  ++ +K+    K+    +R+ ++   + +K + E  AL IVE+LL+  I  EFL    E    +    Y DV+DERS++KLCGYPLC   L  I+P+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R+++     P  ++L +    + GEE+ L
Sbjct:   11 GRKAGAPRRSRKAAGTKQTSTLKQEDASKRKAELEAAVRKKIEFERKALHIVEQLLEENITEEFLM---ECGKFITPAHYSDVVDERSIVKLCGYPLCQKKL-GIVPKQKYKISTKTNKVYDITERKSFCSNFCYQASKFFEAQIPKTPVWVREEE---RHPDFQLLKEQQSGHSGEEVQL 184          

HSP 2 Score: 58.5362 bits (140), Expect = 6.112e-8
Identity = 39/126 (30.95%), Postives = 63/126 (50.00%), Query Frame = 0
Query:  228 LETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQ------VVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMI 347
            ++ LP  E L     ++ L I +    F R    +D E  K  +SE H    P + S +Q      +V  +L  VLP +L    I + DI   ++ L++ F LT+ NI+    EWTL+A+V+L ++
Sbjct:  443 IKPLPSYENLKKETEKLNLRIRE----FYRGRYVLDEETTKSQDSEEHDSTFPLIDSSSQNQIRKRIVLEKLSKVLPGLLVPLQITLGDIYTQLKNLVRTFRLTNRNIIHKPAEWTLIAMVLLSLL 564          
BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:RPAP2 "Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2" species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008420 "CTD phosphatase activity" evidence=ISS] [GO:0009301 "snRNA transcription" evidence=ISS] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0070940 "dephosphorylation of RNA polymerase II C-terminal domain" evidence=ISS] Pfam:PF04181 GO:GO:0005737 GO:GO:0046872 GO:GO:0016591 GO:GO:0009301 GO:GO:0008420 GO:GO:0070940 InterPro:IPR007308 PROSITE:PS51479 EMBL:DAAA02007907 EMBL:BC123867 RefSeq:NP_001096736.1 RefSeq:XP_005204350.1 RefSeq:XP_005204351.1 RefSeq:XP_005204352.1 UniGene:Bt.29255 STRING:9913.ENSBTAP00000041791 Ensembl:ENSBTAT00000044283 GeneID:529184 KEGG:bta:529184 CTD:79871 GeneTree:ENSGT00390000017965 HOGENOM:HOG000253960 OMA:IIFRTSC OrthoDB:EOG7XWPQD TreeFam:TF331431 NextBio:20874979 Uniprot:F6RRD7)

HSP 1 Score: 116.316 bits (290), Expect = 7.846e-27
Identity = 64/153 (41.83%), Postives = 91/153 (59.48%), Query Frame = 0
Query:   47 ERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
            +R+ ++   + +K + E  AL IVE+LL+  I  EFL    E    +    Y DV+DERS++KLCGYPLC + L  I+P+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R+++     P  ++L        GEEI L
Sbjct:   39 QRKAELEAAVRKKIEFERKALHIVEQLLEENISEEFL---RECGKFITPAHYSDVVDERSIIKLCGYPLCQNKL-GIVPKQKYKISTKTNKVYDITERKCFCSNFCYKASKFFEAQIPKSPVWIREEE---RHPDFQLLQDGQSGPSGEEIQL 184          

HSP 2 Score: 55.0694 bits (131), Expect = 7.540e-7
Identity = 51/186 (27.42%), Postives = 81/186 (43.55%), Query Frame = 0
Query:  182 ILGKDYGKY--PGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDEL------------EKELETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQ------VVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMI 347
            + G++Y          PL + E  +  D  S  DP +H     EL            +  ++ LP  E L      + L I +    F R    ++ E  K  +SE H    P + S +Q      +V  +L+ VLP +L    I + DI   ++ L+  F LT+ NI+    EWTL+ALV+L ++
Sbjct:  384 LYGQNYASVCLKSSSTPLVKEEELDEDDMNS--DPDSHSPALQELNSLDESLPFRASDTAIKPLPSYENLKKETETLNLRIRE----FYRGRYVLNEETTKSQDSEEHDPTFPLIDSSSQNQIRKRIVLEKLNKVLPGLLGPLQITLGDIYTQLKNLVHTFRLTNRNIIHKPAEWTLIALVLLSIL 563          
BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:RPAP2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008420 "CTD phosphatase activity" evidence=IEA] [GO:0009301 "snRNA transcription" evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=IEA] [GO:0070940 "dephosphorylation of RNA polymerase II C-terminal domain" evidence=IEA] Pfam:PF04181 InterPro:IPR007308 PROSITE:PS51479 CTD:79871 GeneTree:ENSGT00390000017965 OrthoDB:EOG7XWPQD TreeFam:TF331431 EMBL:AADN03005651 RefSeq:XP_422341.3 UniGene:Gga.9632 Ensembl:ENSGALT00000009572 GeneID:424501 KEGG:gga:424501 Uniprot:F1NBW9)

HSP 1 Score: 116.316 bits (290), Expect = 9.535e-27
Identity = 65/154 (42.21%), Postives = 93/154 (60.39%), Query Frame = 0
Query:   47 ERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEAL-PSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
            +R+  +     +K + E  AL IVE+LL+  I  EFL      + PS     YKD++DERS++KLCGYP+C + L  + P+QKY I +   +VYD+TERK FCSN CY AS Y   Q+   P+WMR+++  S+   I++L K      GEE+ L
Sbjct:   35 QRKAALEASTRKKIELEKKALHIVEQLLEENITEEFLLNSGRCITPS----HYKDIVDERSIIKLCGYPVCQNKLENV-PKQKYRISTRTNRVYDITERKCFCSNFCYRASKYFEAQISKSPVWMREEEIPSD---IELLKKGQSGQSGEEVKL 180          

HSP 2 Score: 55.4546 bits (132), Expect = 5.340e-7
Identity = 28/100 (28.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:  285 RTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSM 384
            R ++V  +L   LP +L    I + D+  +++ L+K F LT+ NI+  M EWTL+A+V+L ++       ++  +S    ++L  LL     + + + S+
Sbjct:  505 RKRIVLEKLRKALPAVLGPLQITLGDVYTELKNLVKTFRLTNRNIIHKMPEWTLIAIVLLSVLSQNIPVFKSSQRSPAYTQFLTTLLGELHFKNEDLESL 604          
BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:RPAP2 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008420 "CTD phosphatase activity" evidence=IEA] [GO:0009301 "snRNA transcription" evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=IEA] [GO:0070940 "dephosphorylation of RNA polymerase II C-terminal domain" evidence=IEA] Pfam:PF04181 GO:GO:0005737 GO:GO:0016591 GO:GO:0009301 GO:GO:0008420 GO:GO:0070940 InterPro:IPR007308 PROSITE:PS51479 GeneTree:ENSGT00390000017965 OMA:IIFRTSC OrthoDB:EOG7XWPQD TreeFam:TF331431 EMBL:CU855851 Ensembl:ENSSSCT00000007559 Uniprot:F1S4F9)

HSP 1 Score: 112.849 bits (281), Expect = 1.303e-25
Identity = 70/184 (38.04%), Postives = 107/184 (58.15%), Query Frame = 0
Query:   20 AREALKSKSSTSSSSSKK-KPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKIL--GKDYGKYPGEEIPLS 198
             R A   ++S + + +K+    ++    +R+ ++   + +K + E  AL IVE+LL+  I  EFL   +E    +    Y DV+DER+++KLCGYPLC   L  I+P+QKY I +   KVYD+TERK FCSN CY AS     Q+   P+W+R+++     P  ++L  G+  G + GEEI LS
Sbjct:   11 GRRARGPRASRNVAGTKRTSALQQEDASQRKAELEAAIRKKIEFERKALCIVEQLLEENITEEFL---KECGKFITPAHYSDVVDERAIIKLCGYPLCQKKL-GIVPKQKYKISTRTNKVYDITERKCFCSNFCYKASKLFQAQIPKTPVWVREEE---RHPDFQLLQEGQSSG-HSGEEIQLS 186          

HSP 2 Score: 46.2098 bits (108), Expect = 5.033e-4
Identity = 37/116 (31.90%), Postives = 54/116 (46.55%), Query Frame = 0
Query:  231 LPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVIS------RTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLA 340
            LP  E L      + L I +    F R    ++ E  K  +SE H    P + S      R ++V  +L  VLP +L    I + DI   +R L++ F LT+ NI+    EWTL+A
Sbjct:  449 LPSYENLKKETETLNLRIRE----FYRGRYVLNEETTKSQDSEEHDPTFPLIDSSSQNQIRKRIVLEKLSKVLPGLLGPLQITLGDIYPQLRNLVRTFRLTNRNIIHKPAEWTLIA 560          
BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:R08D7.2 species:6239 "Caenorhabditis elegans" [GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia development" evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis" evidence=IMP] Pfam:PF04181 GO:GO:0005634 GO:GO:0016311 GO:GO:0046872 GO:GO:0004721 EMBL:Z12017 InterPro:IPR007308 PROSITE:PS51479 OrthoDB:EOG7XWPQD PIR:S41037 RefSeq:NP_498983.1 UniGene:Cel.10207 ProteinModelPortal:P30641 STRING:6239.R08D7.2.2 PaxDb:P30641 EnsemblMetazoa:R08D7.2.1 EnsemblMetazoa:R08D7.2.2 GeneID:176267 KEGG:cel:CELE_R08D7.2 UCSC:R08D7.2.1 CTD:176267 WormBase:R08D7.2 eggNOG:NOG241465 HOGENOM:HOG000018107 InParanoid:P30641 OMA:LPNLDKY NextBio:891842 PRO:PR:P30641 Uniprot:P30641)

HSP 1 Score: 76.2554 bits (186), Expect = 1.019e-13
Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   85 EEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDL-TERKKFCSNSCYNASSYILEQLDNEPLWM 168
            +E LP L+ + + +V++ER + K CG+P C  + PKI   Q + I   + K+++   +R KFCS  CY  SS++ +QLD  PLW+
Sbjct:   35 QEHLPHLHCLGWDEVVEERYVNKQCGFPSCQKAPPKITRNQMFEIDRKEGKIFEFRKQRAKFCSEMCYQKSSFVRKQLDEHPLWI 119          
BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:R08D7.2 "Putative RNA polymerase II subunit B1 CTD phosphatase R08D7.2" species:6239 "Caenorhabditis elegans" [GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA] [GO:0016311 "dephosphorylation" evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF04181 GO:GO:0005634 GO:GO:0016311 GO:GO:0046872 GO:GO:0004721 EMBL:Z12017 InterPro:IPR007308 PROSITE:PS51479 OrthoDB:EOG7XWPQD PIR:S41037 RefSeq:NP_498983.1 UniGene:Cel.10207 ProteinModelPortal:P30641 STRING:6239.R08D7.2.2 PaxDb:P30641 EnsemblMetazoa:R08D7.2.1 EnsemblMetazoa:R08D7.2.2 GeneID:176267 KEGG:cel:CELE_R08D7.2 UCSC:R08D7.2.1 CTD:176267 WormBase:R08D7.2 eggNOG:NOG241465 HOGENOM:HOG000018107 InParanoid:P30641 OMA:LPNLDKY NextBio:891842 PRO:PR:P30641 Uniprot:P30641)

HSP 1 Score: 76.2554 bits (186), Expect = 1.019e-13
Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   85 EEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDL-TERKKFCSNSCYNASSYILEQLDNEPLWM 168
            +E LP L+ + + +V++ER + K CG+P C  + PKI   Q + I   + K+++   +R KFCS  CY  SS++ +QLD  PLW+
Sbjct:   35 QEHLPHLHCLGWDEVVEERYVNKQCGFPSCQKAPPKITRNQMFEIDRKEGKIFEFRKQRAKFCSEMCYQKSSFVRKQLDEHPLWI 119          
BLAST of EMLSAG00000000696 vs. C. finmarchicus
Match: gi|592899568|gb|GAXK01058807.1| (TSA: Calanus finmarchicus comp126072_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 120.168 bits (300), Expect = 1.104e-28
Identity = 60/130 (46.15%), Postives = 85/130 (65.38%), Query Frame = 0
Query:   45 EEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRD-DKP 173
            EEE+REKIR  LL+KK  E  A+++VE++++  +   W    A   LN+ +Y D ++ERSL  +CGYPLC +   K     K+HI    +KVYDL ER+ FCSN C+ AS+Y  EQL+  PLW+R+ +KP
Sbjct: 1277 EEEKREKIRVALLKKKSYEDKAIKLVEEMIEPGVSASWLVSSA-NFLNKNYYSDGVEERSLTGICGYPLCENKREKKKNLGKFHISLKDKKVYDLEERRLFCSNWCFKASNYFREQLETSPLWLREVEKP 1663          

HSP 2 Score: 67.781 bits (164), Expect = 2.132e-11
Identity = 40/116 (34.48%), Postives = 71/116 (61.21%), Query Frame = 0
Query:  283 ISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHK 398
            + R ++V ++L   LPE+L LF   + ++  D+R+L+  F   + N+VF   EWTL+ L+IL+++  KN KL+TVL  +++ KYL ++LL+  LE   +   + +   D+  L+ K
Sbjct:   71 LHRRRIVLDKLFKTLPELLKLFSFSLEEMMGDLRLLVNSFQFAADNVVFRPEEWTLMGLLILKLLALKNSKLKTVLDDENSVKYLKLILLSHQLEVVVLEQTVRDLTGDVMKLVAK 418          
BLAST of EMLSAG00000000696 vs. C. finmarchicus
Match: gi|592794329|gb|GAXK01160239.1| (TSA: Calanus finmarchicus comp142829_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 35.039 bits (79), Expect = 5.003e-1
Identity = 26/66 (39.39%), Postives = 31/66 (46.97%), Query Frame = 0
Query:   85 EEALPSLNQMFYKD-VIDER---------SLLKLCGYPLC----THSLPKIIPRQKYHIVSSQRKV 136
            E AL S   + YK  +ID +         S    CGYPLC    T  LPKII   KYH +   R+V
Sbjct:  569 EVALCSCKIVIYKTFLIDSKHIDCGSFVGSCCSCCGYPLCC*STTAMLPKII--GKYHFIPIHRRV 760          
BLAST of EMLSAG00000000696 vs. C. finmarchicus
Match: gi|592899642|gb|GAXK01058733.1| (TSA: Calanus finmarchicus comp6104055_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 6.064e+0
Identity = 19/51 (37.25%), Postives = 30/51 (58.82%), Query Frame = 0
Query:  286 TQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEW 336
            T V W QL+SVL E+ +L  + +P +S + +I     YL  S  ++S+H W
Sbjct:  172 TSVSWIQLESVLAEVNSLNSL-IPSVSLNWKI----SYLCLSMKLWSLHNW 309          
BLAST of EMLSAG00000000696 vs. L. salmonis peptides
Match: EMLSAP00000000696 (pep:novel supercontig:LSalAtl2s:LSalAtl2s110:434670:436202:-1 gene:EMLSAG00000000696 transcript:EMLSAT00000000696 description:"snap_masked-LSalAtl2s110-processed-gene-4.16")

HSP 1 Score: 822.002 bits (2122), Expect = 0.000e+0
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0
Query:    1 MIGNSQIDCEMTEEEIFEIAREALKSKSSTSSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDELEKELETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHKGAFKSNG 405
            MIGNSQIDCEMTEEEIFEIAREALKSKSSTSSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDELEKELETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHKGAFKSNG
Sbjct:    1 MIGNSQIDCEMTEEEIFEIAREALKSKSSTSSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDELEKELETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHKGAFKSNG 405          
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|380877128|sp|A8DYY5.1|RPAP2_DROME (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 112.464 bits (280), Expect = 9.328e-29
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 0
Query:   46 EERREKIRTGLLRKKQSEATALEIVEKLLDSEI---EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKD 186
            E+ R+++   +++K+ + A A EIV +LL+  I   EFL    E  P      Y D++DER + KLCGYPLC+  L + +P+QKY I +S+ KVYD+TERKKFCS  C+ AS YI  Q+   PLW+RD +    RP  ++L ++
Sbjct:    7 EQLRQQLIAAVVKKRAAIARAHEIVVRLLEPGIPEPEFLSLLCEIGPP----NYSDIVDEREINKLCGYPLCSTVL-ENVPKQKYSISASKNKVYDITERKKFCSGYCFKASEYIKSQVPTSPLWLRDRE---TRPSFQLLPRN 142          
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|115503693|sp|Q8VC34.2|RPAP2_MOUSE (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 120.168 bits (300), Expect = 2.546e-28
Identity = 84/261 (32.18%), Postives = 136/261 (52.11%), Query Frame = 0
Query:   31 SSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPM-IKILGKDYGKYPGEEI-----PLSQAESPEIGDTKSFCDPK----THEEIEDELEKELETLPDVEELIHGVRQILLDI-----SKETILFGRTDMWMDNEKEKEDNSEL 274
            ++ + + +  K+    +R+ ++   + RK + E  A+ IVE+LL+  I  EFL   +E    +    Y DV+DERS++KLCGYPLC   L  +IP+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R++    ERP   ++L K      GE +      ++ A+    G  ++ CDP       E   DE E+       V  L+ G R   +D      +K +I+  +    +D+++ ++  SE+
Sbjct:   23 ATGTKQTRALKRGDASKRQAELEAAIQRKVEFERKAVRIVEQLLEENITEEFL---KECGMFITPAHYSDVVDERSIIKLCGYPLCQKKL-GVIPKQKYRISTKTNKVYDITERKSFCSNFCYRASKFFETQIPKTPVWVREE----ERPPDFQLLKKGQSGSSGEVVQFFRDAVTAADVDGSGALEAQCDPASSSSWSERASDEEEQGF-----VSSLLPGNRPKAVDTRPQPHTKSSIMRKKAAQNVDSKEGEQTVSEV 270          
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|81882974|sp|Q5I0E6.1|RPAP2_RAT (RecName: Full=RNA polymerase II subunit B1 CTD phosphatase Rpap2; AltName: Full=Putative RNA polymerase II-associated protein 2)

HSP 1 Score: 119.783 bits (299), Expect = 3.896e-28
Identity = 77/224 (34.38%), Postives = 118/224 (52.68%), Query Frame = 0
Query:   31 SSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPM-IKILGKDYGKYPGEEI-----PLSQAESPEIGDTKSFCDPKT----HEEIEDELEKELETLPDVEELIHGVR 242
            ++ + +    K+    +R+ ++   L RK +SE  A+ +VE+LL+  I  EFL   +E    +    Y DV+DER+++KLCGYPLC   L  +IP+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R++    ERP   ++L K      GE +      ++ A+    G   + C+P +     E   DE   + E    V  L+ G R
Sbjct:   23 ATGTKQTSALKRRDASKRQAELEAALQRKVESERRAVRLVEQLLEENITEEFL---KECGMFITPAHYSDVVDERAIIKLCGYPLCQKKL-GVIPKQKYRISTKTNKVYDITERKSFCSNFCYKASKFFEAQIPKTPVWVREE----ERPPEFQLLKKGQSGCSGEVVQFFRDAVTAADVDAYGAFDAQCEPASSSTWSERASDERASDEEGPGFVSSLLPGNR 238          
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|74750745|sp|Q8IXW5.1|RPAP2_HUMAN (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 119.398 bits (298), Expect = 5.334e-28
Identity = 68/181 (37.57%), Postives = 105/181 (58.01%), Query Frame = 0
Query:   20 AREALKSKSSTSSSSSKK-KPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
             R+A   + S  ++ +K+    K+    +R+ ++   + +K + E  AL IVE+LL+  I  EFL    E    +    Y DV+DERS++KLCGYPLC   L  I+P+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R+++     P  ++L ++   + GEE+ L
Sbjct:   11 GRKAGAPRCSRKAAGTKQTSTLKQEDASKRKAELEAAVRKKIEFERKALHIVEQLLEENITEEFLM---ECGRFITPAHYSDVVDERSIVKLCGYPLCQKKL-GIVPKQKYKISTKTNKVYDITERKSFCSNFCYQASKFFEAQIPKTPVWVREEE---RHPDFQLLKEEQSGHSGEEVQL 184          

HSP 2 Score: 55.8398 bits (133), Expect = 2.955e-7
Identity = 38/126 (30.16%), Postives = 62/126 (49.21%), Query Frame = 0
Query:  228 LETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQ------VVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMI 347
            ++ LP  E L     ++ L I +    F R    +  E  K  +SE H    P + S +Q      +V  +L  VLP +L    I + DI   ++ L++ F LT+ NI+    EWTL+A+V+L ++
Sbjct:  443 IKPLPSYENLKKETEKLNLRIRE----FYRGRYVLGEETTKSQDSEEHDSTFPLIDSSSQNQIRKRIVLEKLSKVLPGLLVPLQITLGDIYTQLKNLVRTFRLTNRNIIHKPAEWTLIAMVLLSLL 564          
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|75041829|sp|Q5RA37.1|RPAP2_PONAB (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 118.627 bits (296), Expect = 8.476e-28
Identity = 68/181 (37.57%), Postives = 104/181 (57.46%), Query Frame = 0
Query:   20 AREALKSKSSTSSSSSKK-KPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
             R+A   + S  ++ +K+    K+    +R+ ++   + +K + E  AL IVE+LL+  I  EFL    E    +    Y DV+DERS++KLCGYPLC   L  I+P+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R+++     P  ++L +    + GEE+ L
Sbjct:   11 GRKAGAPRRSRKAAGTKQTSTLKQEDASKRKAELEAAVRKKIEFERKALHIVEQLLEENITEEFLM---ECGKFITPAHYSDVVDERSIVKLCGYPLCQKKL-GIVPKQKYKISTKTNKVYDITERKSFCSNFCYQASKFFEAQIPKTPVWVREEE---RHPDFQLLKEQQSGHSGEEVQL 184          

HSP 2 Score: 58.5362 bits (140), Expect = 4.750e-8
Identity = 39/126 (30.95%), Postives = 63/126 (50.00%), Query Frame = 0
Query:  228 LETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQ------VVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMI 347
            ++ LP  E L     ++ L I +    F R    +D E  K  +SE H    P + S +Q      +V  +L  VLP +L    I + DI   ++ L++ F LT+ NI+    EWTL+A+V+L ++
Sbjct:  443 IKPLPSYENLKKETEKLNLRIRE----FYRGRYVLDEETTKSQDSEEHDSTFPLIDSSSQNQIRKRIVLEKLSKVLPGLLVPLQITLGDIYTQLKNLVRTFRLTNRNIIHKPAEWTLIAMVLLSLL 564          
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|380877126|sp|F6RRD7.1|RPAP2_BOVIN (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 116.316 bits (290), Expect = 5.206e-27
Identity = 64/153 (41.83%), Postives = 91/153 (59.48%), Query Frame = 0
Query:   47 ERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
            +R+ ++   + +K + E  AL IVE+LL+  I  EFL    E    +    Y DV+DERS++KLCGYPLC + L  I+P+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R+++     P  ++L        GEEI L
Sbjct:   39 QRKAELEAAVRKKIEFERKALHIVEQLLEENISEEFL---RECGKFITPAHYSDVVDERSIIKLCGYPLCQNKL-GIVPKQKYKISTKTNKVYDITERKCFCSNFCYKASKFFEAQIPKSPVWIREEE---RHPDFQLLQDGQSGPSGEEIQL 184          

HSP 2 Score: 55.0694 bits (131), Expect = 5.893e-7
Identity = 51/186 (27.42%), Postives = 81/186 (43.55%), Query Frame = 0
Query:  182 ILGKDYGKY--PGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDEL------------EKELETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQ------VVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMI 347
            + G++Y          PL + E  +  D  S  DP +H     EL            +  ++ LP  E L      + L I +    F R    ++ E  K  +SE H    P + S +Q      +V  +L+ VLP +L    I + DI   ++ L+  F LT+ NI+    EWTL+ALV+L ++
Sbjct:  384 LYGQNYASVCLKSSSTPLVKEEELDEDDMNS--DPDSHSPALQELNSLDESLPFRASDTAIKPLPSYENLKKETETLNLRIRE----FYRGRYVLNEETTKSQDSEEHDPTFPLIDSSSQNQIRKRIVLEKLNKVLPGLLGPLQITLGDIYTQLKNLVHTFRLTNRNIIHKPAEWTLIALVLLSIL 563          
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|380877127|sp|B0UYH6.1|RPAP2_DANRE (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase rpap2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 108.997 bits (271), Expect = 1.358e-24
Identity = 62/155 (40.00%), Postives = 91/155 (58.71%), Query Frame = 0
Query:   45 EEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
            E +RRE ++  L +K + E  A ++VE+LL+  +  EFL    +    +    YKD ++ERS+ KLCGYP+C + L  + P Q+Y I +   KVYD+TERK FCSN CY AS     Q+   PLW+R ++     P IK++ +  G   G+EI L
Sbjct:   31 EAKRREAVKEQLRQKLELERKARQVVERLLEDSVTEEFLM---DCAWHITPANYKDTVEERSIAKLCGYPMCPNKLTNV-PTQQYKISTKTNKVYDITERKCFCSNFCYKASKSFELQISKIPLWLRKEE---SPPEIKLMKQGDGGSSGQEIKL 178          

HSP 2 Score: 56.225 bits (134), Expect = 2.706e-7
Identity = 59/227 (25.99%), Postives = 103/227 (45.37%), Query Frame = 0
Query:  179 MIKILGKDY---------GKYPGEEIPLSQAESPEIGDTKSFCDP-KTHEEIED--ELEKELETLP-DVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQ------VVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMII 386
            MI + G DY         G +  E++     +  E+G   +   P +T   + D   L KE E L   V E   GV   +L    ET     T+   D+ K+           +P V S  Q      +V  +L   L +I+    + M D+ +DV  L++ F  T++NI+    EWTL+A+V+L ++ + +  LR  L S  + +Y++  +    LE+K + ++++
Sbjct:  376 MIFLYGPDYASGMQLSTAGAWEEEQLDEDDLDEAEVGVRSAEGGPSRTSAPVPDVETLRKETEMLELRVREFYKGV--CVLPEEVETAAVKETEHTQDSGKDPP---------LPLVDSHAQHQIQKRIVVEKLSHSLRDIVGPLRLTMSDVINDVNNLVRTFRFTNTNIIHKSPEWTLIAVVLLSVLTEVSPLLRESLASVSSLEYISCFMKELKLEDKDLHNLVL 591          
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|267548|sp|P30641.1|RPAP2_CAEEL (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase R08D7.2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 76.2554 bits (186), Expect = 7.043e-14
Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   85 EEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDL-TERKKFCSNSCYNASSYILEQLDNEPLWM 168
            +E LP L+ + + +V++ER + K CG+P C  + PKI   Q + I   + K+++   +R KFCS  CY  SS++ +QLD  PLW+
Sbjct:   35 QEHLPHLHCLGWDEVVEERYVNKQCGFPSCQKAPPKITRNQMFEIDRKEGKIFEFRKQRAKFCSEMCYQKSSFVRKQLDEHPLWI 119          
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|74582120|sp|O42853.1|RPAP2_SCHPO (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase rtr1; AltName: Full=RNA polymerase II-associated protein 2 homolog rtr1)

HSP 1 Score: 64.6994 bits (156), Expect = 6.506e-11
Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 0
Query:   61 QSEATALEIVEKLLDS-EIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQ--KYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDD 171
            Q +  ALE +EKL+D   +E L   EEA   L +  Y  V+ ER L+ LCGYP+C +      P+Q  +Y +  S  KVY       +CS  C+  S   + +L +EPLW+R+D
Sbjct:   37 QYDFFALEWIEKLVDPVSLETL---EEARKYLRKSDYDQVVKERKLVNLCGYPVCPYE-----PKQQTRYKLEDSGMKVYGGLNY--YCSKDCFLKSCQYMVELSDEPLWIRED 140          
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|380877125|sp|F4K1B1.1|RPAP2_ARATH (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog; AltName: Full=RNA polymerase II-associated protein 2 homolog)

HSP 1 Score: 63.929 bits (154), Expect = 1.020e-9
Identity = 32/70 (45.71%), Postives = 39/70 (55.71%), Query Frame = 0
Query:   92 NQMF----------YKDVIDERSLLKLCGYPLCTHSLPKIIPRQ-KYHIVSSQRKVYDLTERKKFCSNSC 150
            NQ+F          Y+DV+ ER++ KLCGY LC   LP  + R+ KY I     KVYDL E  KFCS  C
Sbjct:   29 NQLFAARKLMSRSDYEDVVTERAIAKLCGYTLCQRFLPSDVSRRGKYRISLKDHKVYDLQETSKFCSAGC 98          
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: XP_016768443.1 (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase Rpap2 [Apis mellifera])

HSP 1 Score: 122.479 bits (306), Expect = 9.928e-30
Identity = 62/144 (43.06%), Postives = 95/144 (65.97%), Query Frame = 0
Query:   52 IRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEI 195
            ++  +++KK+ +A AL IVE+LL+S+I+  W     L  +N+   +DVI+ER+++KLCGY LC ++L K I  Q+YHI + + KVYD+T RK FCS+ CY AS+Y+LEQ+   PLW+RD +   E  ++    K      G+EI
Sbjct:   24 MQLAIIKKKKCDAKALTIVEQLLESKIDSQWLLSN-LKYINKNHMEDVIEERAIIKLCGYVLCNNAL-KTITDQRYHISTKKNKVYDITRRKNFCSSHCYGASNYLLEQMLTSPLWLRDKEEIPEFQILLTKDKFIKNVVGDEI 165          

HSP 2 Score: 57.7658 bits (138), Expect = 3.092e-8
Identity = 29/114 (25.44%), Postives = 67/114 (58.77%), Query Frame = 0
Query:  285 RTQVVWNQLDSVLPEILTLFG-------IQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIAD 391
            R ++  ++L+ +LP++            +   + S  +++LI  F L++SN++F   EWTL+ L+I++M+   + +L+ +L +K A  Y++M+L+++ L+   +  +I+  I +
Sbjct:  402 RRRIFLDKLNKILPDLFNALTKNKLSQYVYNSEKSTLIKVLINTFSLSASNVIFKTAEWTLVGLIIIKMLSMIDPELKCLLSTKQALMYISMILMSYKLDSNYLERLIMELINN 515          
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: ABV53661.1 (uncharacterized protein Dmel_CG34183 [Drosophila melanogaster])

HSP 1 Score: 112.464 bits (280), Expect = 4.521e-29
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 0
Query:   46 EERREKIRTGLLRKKQSEATALEIVEKLLDSEI---EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKD 186
            E+ R+++   +++K+ + A A EIV +LL+  I   EFL    E  P      Y D++DER + KLCGYPLC+  L + +P+QKY I +S+ KVYD+TERKKFCS  C+ AS YI  Q+   PLW+RD +    RP  ++L ++
Sbjct:    7 EQLRQQLIAAVVKKRAAIARAHEIVVRLLEPGIPEPEFLSLLCEIGPP----NYSDIVDEREINKLCGYPLCSTVL-ENVPKQKYSISASKNKVYDITERKKFCSGYCFKASEYIKSQVPTSPLWLRDRE---TRPSFQLLPRN 142          
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: EDO63560.1 (AGAP008431-PA, partial [Anopheles gambiae str. PEST])

HSP 1 Score: 108.997 bits (271), Expect = 1.030e-26
Identity = 54/125 (43.20%), Postives = 82/125 (65.60%), Query Frame = 0
Query:   49 REKIRTGLLRKKQSEATALEIVEKLLD---SEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRD 170
            +E+++  L +KK+    A  +VE L++   +E E L      L  +NQ   +D++ ER+++K+CGYPLC + L K IP+Q+Y I  +Q KV+D+TERK FCS  CY AS+YI +Q+   PLW+RD
Sbjct:   36 KEQLQKALRKKKECNDKAQRVVETLIEPGRTEDELLTL----LKDINQCHMEDIVQERAIVKICGYPLCDNEL-KNIPKQQYVISVTQNKVFDITERKNFCSGDCYKASNYIKQQMLTSPLWLRD 155          
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: gb|EFA00145.2| (hypothetical protein TcasGA2_TC002966 [Tribolium castaneum])

HSP 1 Score: 110.923 bits (276), Expect = 2.633e-25
Identity = 62/171 (36.26%), Postives = 99/171 (57.89%), Query Frame = 0
Query:   59 KKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIP---LSQAESPEIGDTKSFCDPKTHEEIEDEL 224
            KK+ +A AL+I++  ++ ++  + L+   + LP +NQ  Y+D+++ER++ KLCGYPLC+  +P + P+++++I +   KVYD+T+RK +CSN CY AS +I  Q+D  PLW+R      E+    +L K     PGE I    +  A  P      SF      E  E EL
Sbjct:   33 KKECDAKALQILQFAIEGKMRSDALF---KCLPYINQSHYQDIVEERAISKLCGYPLCSKKIPDM-PKKQFYISTKNNKVYDITDRKNYCSNFCYRASLHIKGQIDTSPLWLR---KYQEKAHYTLLNKSEKGLPGEMIDQGVIKPAVEPYFTSVSSFTQMSLDEAEELEL 196          
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: gb|KFM57894.1| (putative RNA polymerase II subunit B1 CTD phosphatase rpap2, partial [Stegodyphus mimosarum])

HSP 1 Score: 105.531 bits (262), Expect = 7.902e-24
Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 0
Query:   53 RTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGK-DYGKYPGEEI 195
            R  +L+ K+S    L+IVE LL+ ++   WF +     L Q  Y DVI ERS+  +CGYPLC+  + ++ P+QKYHI     KVYDLTERK FCSN+CY AS+++  QL   PL+MR +    E  +I +L   D     GEEI
Sbjct:   28 REKVLKIKRS---ILKIVEALLEEDVSKEWFLDNCT-KLCQNDYDDVIQERSIEHMCGYPLCSKIITQV-PKQKYHISRLSNKVYDLTERKCFCSNACYKASNFVKAQLSPVPLYMRKE----ETIIINLLSDCDNKGSAGEEI 162          
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: EFX69879.1 (hypothetical protein DAPPUDRAFT_300664 [Daphnia pulex])

HSP 1 Score: 101.679 bits (252), Expect = 1.097e-22
Identity = 49/124 (39.52%), Postives = 82/124 (66.13%), Query Frame = 0
Query:   47 ERREKIRTGLLRKKQSEATALEIVEKLL-DSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMR 169
            E+R  +     +KK+SE  AL +VE ++ +S ++  W  ++A   +N  +Y+D I+ER++ K CG+P+C H+L +   +QKY I    +KV+D+T+RK FCS+ C++AS++  +QL   PLWMR
Sbjct:   19 EKRAAVEAAFRKKKESERRALGLVEHMVENSAVDTQWLADKA-KFINPQYYQDTIEERAIAKQCGFPVC-HNLIEKELKQKYRIDLKTKKVFDVTQRKNFCSDVCFSASNHFKDQLLTSPLWMR 140          
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: EEB17600.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 97.0561 bits (240), Expect = 7.403e-21
Identity = 55/139 (39.57%), Postives = 88/139 (63.31%), Query Frame = 0
Query:   32 SSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRD 170
            +S SKKK   K  ++  +E+++  L +KK+  A A +IVE L + +I+  WF +  +   NQ  ++DV  ERS+ K+CGYPLC + L  I+ +Q +HI +   +V+D+T+RK FCS+ CY ++ ++  QL   PLW RD
Sbjct:    2 ASKSKKKNIPKSIKDMSKEELQETLEKKKKQNAKAQKIVEMLCELKIDEQWFLDNHI---NQSHFEDVTIERSISKICGYPLCDNELKNILTQQ-FHISTKYNRVFDITQRKNFCSSLCYKSAMFVKNQLFTSPLWFRD 136          
BLAST of EMLSAG00000000696 vs. nr
Match: gi|63102016|gb|AAH95735.1| (RNA polymerase II associated protein 2 [Danio rerio])

HSP 1 Score: 135.191 bits (339), Expect = 8.713e-33
Identity = 100/346 (28.90%), Postives = 167/346 (48.27%), Query Frame = 0
Query:   45 EEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDELEKELE--TLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMII 386
            E +RRE ++  L +K + E  A ++VE+LL+  +  EFL    +    +    YKD ++ERS+ KLCGYP+C + L  + P Q+Y I +   KVYD+TERK FCSN CY AS     Q+   PLW+R ++     P IK++ +  G   G+EI L                P T  +I++ +E   +   LP V+   H   QI                                        + ++V  +L   L +I+    + M D+ +DV  L++ F  T++NI+    EWTL+A+V+L ++ + +  LR  L S  + +Y++  +    LE+K + ++++
Sbjct:   31 EAKRREAVKEQLRQKLELERKARQVVERLLEDSVTEEFLM---DCAWHITPANYKDTVEERSIAKLCGYPMCPNKLTNV-PTQQYEISTKTNKVYDITERKCFCSNFCYKASKSFELQISKIPLWLRKEE---SPPEIKLMKQGDGGSSGQEIKLIDK-------------PITEADIDNPIEDSGKDPPLPLVDS--HAQHQI----------------------------------------QKRIVVEKLSHSLRDIVGPLRLTMSDVINDVNNLVRTFRFTNTNIIHKSPEWTLIAVVLLSVLTEVSPLLRESLASVSSLEYISCFMKELKLEDKDLHNLVL 314          
BLAST of EMLSAG00000000696 vs. nr
Match: gi|485050345|ref|NP_001019603.2| (putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform 2 [Danio rerio])

HSP 1 Score: 135.191 bits (339), Expect = 8.894e-33
Identity = 100/346 (28.90%), Postives = 167/346 (48.27%), Query Frame = 0
Query:   45 EEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDELEKELE--TLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMII 386
            E +RRE ++  L +K + E  A ++VE+LL+  +  EFL    +    +    YKD ++ERS+ KLCGYP+C + L  + P Q+Y I +   KVYD+TERK FCSN CY AS     Q+   PLW+R ++     P IK++ +  G   G+EI L                P T  +I++ +E   +   LP V+   H   QI                                        + ++V  +L   L +I+    + M D+ +DV  L++ F  T++NI+    EWTL+A+V+L ++ + +  LR  L S  + +Y++  +    LE+K + ++++
Sbjct:   31 EAKRREAVKEQLRQKLELERKARQVVERLLEDSVTEEFLM---DCAWHITPANYKDTVEERSIAKLCGYPMCPNKLTNV-PTQQYKISTKTNKVYDITERKCFCSNFCYKASKSFELQISKIPLWLRKEE---SPPEIKLMKQGDGGSSGQEIKLIDK-------------PITEADIDNPIEDSGKDPPLPLVDS--HAQHQI----------------------------------------QKRIVVEKLSHSLRDIVGPLRLTMSDVINDVNNLVRTFRFTNTNIIHKSPEWTLIAVVLLSVLTEVSPLLRESLASVSSLEYISCFMKELKLEDKDLHNLVL 314          
BLAST of EMLSAG00000000696 vs. nr
Match: gi|998508367|ref|XP_015514552.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Neodiprion lecontei])

HSP 1 Score: 130.568 bits (327), Expect = 1.105e-29
Identity = 80/232 (34.48%), Postives = 128/232 (55.17%), Query Frame = 0
Query:   31 SSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKIL---GKDYGKYPGEEIPLSQ----AESPEIGDTKS--FCDPKTHEEIEDELEKELETLPDVEELIHGVRQILLDISKETI 253
            +S+S K+    +   +  +E+++  L +K+Q +A AL IVE+L+D  ++  W  E  L  +N+    DV++ER++L+ CGY LC + L K+   QKYHI +   KVYD++ RK FCSN+CY A++YILEQ+   PLW+R+ K   E+P  ++L   G      PG+E+ L +     +S EI  T      D     E  + +E  +  +PD      G   +  D+S + I
Sbjct:    2 TSTSRKRNDGSRTKMKMSKEQLQLALTKKRQCDARALAIVERLIDDAVDQTWLLEN-LEHINRCHMDDVVEERAILRRCGYALCDNPL-KLNINQKYHISTRNNKVYDVSRRKNFCSNNCYGATNYILEQMLTSPLWLRNPK---EKPCFQLLPPTGLIKKSTPGDEVYLGRENVSVDSCEIQKTDKAIVSDKLPSTESNNAIENTINNVPDNSINKSGTEIVEGDVSAKEI 228          

HSP 2 Score: 66.6254 bits (161), Expect = 2.753e-8
Identity = 50/196 (25.51%), Postives = 100/196 (51.02%), Query Frame = 0
Query:  221 EDELEKELETLPDVEELIHGVRQILLDI----SKETILFGRTDMWMDNEKEKEDNSELHLRMV----PKVISRTQVVWNQLDSVLPEIL-TLFG--------IQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHKG 399
            E++ +++L+ LPD   L     QI + +      +T++        +    +ED+S   + M+    P+ + R +++  +LD VLPE++ TL G        I        V+ L+  F L++SN++    EW LL L+ + ++     +LR +L +  A KY+ M+L++++LE   + +++  +  DI L+ +K 
Sbjct:  355 EEDSKRDLKPLPDYSVLKEASAQIEVKVRAFYQGQTLIDATKPPSGNAVANEEDDSSTFMPMLGEREPRTLRR-RIILEKLDKVLPEMVRTLAGGEFAVDGCISTNGCGKTVKALVNTFSLSASNVIPKPAEWNLLGLIFIRLLSTSEPRLRFLLGTDRASKYITMILMSYNLEPSDLDTLVAVA-TDIQLVSNKN 548          
BLAST of EMLSAG00000000696 vs. nr
Match: gi|914554034|gb|KOB64773.1| (putative RNA polymerase II associated protein 2 [Operophtera brumata])

HSP 1 Score: 129.413 bits (324), Expect = 3.083e-29
Identity = 75/178 (42.13%), Postives = 105/178 (58.99%), Query Frame = 0
Query:   31 SSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLP-KIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEI 205
            +++  KKKP K   EE  +++IR  LLRKK+  A A +IVE LL+  I  E L    + LP +NQ  + DV +ER++L LCGYP+C HS+  K IP+QKY I     KVYD+T RK FCSN CY ++ Y+ +Q+   PLW R+ +     P   +L  D     G+E+ L   E  +I
Sbjct:    3 TNNKHKKKPMK--FEEMSKDQIRQALLRKKECNAKAQKIVESLLEEGISEEHLL---QCLPDINQAHFDDVFEERAILHLCGYPICQHSISYKDIPKQKYRISLKTNKVYDITARKNFCSNRCYKSAMYVKQQMLTSPLWFREHEVI---PSFHLLPGDTAGSMGQEVDLGVIERVKI 172          

HSP 2 Score: 65.855 bits (159), Expect = 4.832e-8
Identity = 47/182 (25.82%), Postives = 102/182 (56.04%), Query Frame = 0
Query:  222 DELEKELETLPDVEELIHGVRQILLDISKETILFGRTDM----WMDNEKEKEDNSELHLRMV---PKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLM 396
            ++ +K+++ LPD   L    ++I L +     + G T++      + EK+ ED +   L +V    +   R ++V+  L+ VLP++L   G+       DVR+L+  F L ++NI++   +WTL+AL+ ++++  ++ +L  +L+   A +++ +LLL++ L+   +  + I+ + DI+ L+
Sbjct:  388 NKFQKQMQPLPDYSILQEESKRIQLKV--RAYMAGETNIPKPEECEKEKQIEDGTVTQLPLVDTNSQNALRRRIVYQHLNKVLPDLLQSLGLLTLTTRSDVRLLVNTFKLKANNIMYKPMQWTLIALIFIKLLSIRDKRLEYLLEHATAYQHMQLLLLSYKLDGGYLERL-ISWLTDIDRLL 566          
BLAST of EMLSAG00000000696 vs. nr
Match: gi|340716286|ref|XP_003396630.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1 [Bombus terrestris])

HSP 1 Score: 129.798 bits (325), Expect = 3.437e-29
Identity = 64/133 (48.12%), Postives = 94/133 (70.68%), Query Frame = 0
Query:   51 KIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKIL 183
            +++  +++KKQ +A AL IVE LL+ +I+F W     L  +N+   +DVI+ER+++KLCGY LC+++L KII  Q+YHI + + KVYD+T RK FCS+ CY AS+Y+LEQ+   PLW+RD +   E P  KIL
Sbjct:   24 QMQLAIIKKKQCDAKALRIVEHLLEPKIDFQWLLTN-LRYINKSHMEDVIEERAIIKLCGYVLCSNTLTKIID-QRYHISTIKNKVYDITRRKNFCSSHCYGASNYLLEQMPTSPLWLRDKE---EIPEFKIL 151          
BLAST of EMLSAG00000000696 vs. nr
Match: gi|808125139|ref|XP_012165680.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X2 [Bombus terrestris])

HSP 1 Score: 129.413 bits (324), Expect = 4.326e-29
Identity = 64/132 (48.48%), Postives = 93/132 (70.45%), Query Frame = 0
Query:   52 IRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKIL 183
            ++  +++KKQ +A AL IVE LL+ +I+F W     L  +N+   +DVI+ER+++KLCGY LC+++L KII  Q+YHI + + KVYD+T RK FCS+ CY AS+Y+LEQ+   PLW+RD +   E P  KIL
Sbjct:    1 MQLAIIKKKQCDAKALRIVEHLLEPKIDFQWLLTN-LRYINKSHMEDVIEERAIIKLCGYVLCSNTLTKIID-QRYHISTIKNKVYDITRRKNFCSSHCYGASNYLLEQMPTSPLWLRDKE---EIPEFKIL 127          
BLAST of EMLSAG00000000696 vs. nr
Match: gi|1101334675|ref|XP_018902571.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Bemisia tabaci] >gi|1101334679|ref|XP_018902586.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Bemisia tabaci])

HSP 1 Score: 129.413 bits (324), Expect = 6.262e-29
Identity = 69/165 (41.82%), Postives = 103/165 (62.42%), Query Frame = 0
Query:   36 KKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQA 200
            KK P K LS    +E +R    +KK++   A+ I+EK++DS++E  W  + ++ S+ Q  Y+DV +ER++ +LCGYPLC + L K +P + YHI + Q KVYD+T+RK FCS+ CY AS ++ +QL + PLW+RD      RP  KIL  D G   G E+    +
Sbjct:    8 KKVPKKALS----KEALRVTAQKKKETTIKAMAIIEKMIDSKVEEKWLLD-SVHSITQDQYQDVTEERAITELCGYPLCCNIL-KNVPSKIYHISTRQNKVYDITDRKNFCSSGCYKASIFLKDQLLSSPLWLRD---AEGRPDYKILHIDKGGSLGAEVDFGHS 163          

HSP 2 Score: 64.3142 bits (155), Expect = 1.688e-7
Identity = 48/183 (26.23%), Postives = 98/183 (53.55%), Query Frame = 0
Query:  223 ELEKELETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEK----EKEDNSELHLRMV---PKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHK 398
            E   +L+ LPD   L    +Q  L+I   +   G T + ++        KED+  + L +V    +   R ++V ++L+ +LP++     +   +++  VR L + F  +SSNI F   EW  +A+V+++++  ++  +  +L+S  ++KYL +LL+N+ L+   +  +I+  + DI+ L+ K
Sbjct:  557 EKNADLKPLPDYSLLQREAKQ--LEIKVRSFYEGSTRIEIEEATPQNCNKEDDEGVVLPLVDLHAQKALRRRIVLDRLNVILPDLGRTLNLSTFNLTSAVRSLSQTFNFSSSNITFKPPEWYFIAMVLVKLLSLQDKNMHILLESGSSEKYLTLLLMNWGLDAGYLDRLIL-WLMDIDYLLQK 736          
BLAST of EMLSAG00000000696 vs. nr
Match: gi|815904971|ref|XP_012238380.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X2 [Bombus impatiens])

HSP 1 Score: 128.642 bits (322), Expect = 6.803e-29
Identity = 63/128 (49.22%), Postives = 92/128 (71.88%), Query Frame = 0
Query:   56 LLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKIL 183
            +++KKQ +A AL IVE LL+ +I+F W     +  +N+   +DVI+ER+++KLCGY LC+++L KII  Q+YHI +++ KVYD+T RK FCS+ CY AS+Y+LEQ+   PLW+RD +   E P  KIL
Sbjct:    5 IIKKKQCDAKALRIVEHLLEPKIDFQWLLTN-VRYINKSHMEDVIEERAIIKLCGYVLCSNALTKIID-QRYHISTTKNKVYDITRRKNFCSSHCYGASNYLLEQMPTSPLWLRDKE---EIPEFKIL 127          
BLAST of EMLSAG00000000696 vs. nr
Match: gi|815904969|ref|XP_012238379.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1 [Bombus impatiens])

HSP 1 Score: 128.642 bits (322), Expect = 6.920e-29
Identity = 63/128 (49.22%), Postives = 92/128 (71.88%), Query Frame = 0
Query:   56 LLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKIL 183
            +++KKQ +A AL IVE LL+ +I+F W     +  +N+   +DVI+ER+++KLCGY LC+++L KII  Q+YHI +++ KVYD+T RK FCS+ CY AS+Y+LEQ+   PLW+RD +   E P  KIL
Sbjct:   29 IIKKKQCDAKALRIVEHLLEPKIDFQWLLTN-VRYINKSHMEDVIEERAIIKLCGYVLCSNALTKIID-QRYHISTTKNKVYDITRRKNFCSSHCYGASNYLLEQMPTSPLWLRDKE---EIPEFKIL 151          
BLAST of EMLSAG00000000696 vs. nr
Match: gi|936573356|ref|XP_014218895.1| (PREDICTED: RNA polymerase II subunit B1 CTD phosphatase Rpap2 [Copidosoma floridanum])

HSP 1 Score: 129.028 bits (323), Expect = 8.105e-29
Identity = 72/179 (40.22%), Postives = 115/179 (64.25%), Query Frame = 0
Query:   25 KSKSSTSSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDY-GK--YPGEEIPLSQA 200
            ++K S  ++S+ KK          RE+I+  +++KK+ +A AL+IVE+LL+ E++  W  E+ L  +N+   +DVI+ER++ ++CGY LC   L  ++ +Q+YHI    ++VYD+++RK FCS+SC+ AS+Y+LEQL   PLWMRD +   E P  KI  KD  GK  + G  + L+Q 
Sbjct:    3 RTKRSPKATSNVKKKMT-------REQIQEAIIKKKECDARALKIVEQLLEPEVDPSWLVEK-LQHINRCHMEDVIEERAITRICGYVLCQKPLT-VVYKQQYHISLKDKQVYDVSKRKNFCSSSCFGASNYLLEQLLTSPLWMRDKE---EIPTFKIFKKDVLGKNNHHGATLDLNQG 169          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000696 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 18
Match NameE-valueIdentityDescription
-3.996e-2832.18symbol:Rpap2 "RNA polymerase II associated protein... [more]
-6.016e-2834.38symbol:Rpap2 "RNA polymerase II subunit B1 CTD pho... [more]
-6.016e-2834.38symbol:Rpap2 "RNA polymerase II associated protein... [more]
-8.282e-2837.57symbol:RPAP2 "Putative RNA polymerase II subunit B... [more]
-1.311e-2737.57symbol:RPAP2 "Putative RNA polymerase II subunit B... [more]
-7.846e-2741.83symbol:RPAP2 "Putative RNA polymerase II subunit B... [more]
-9.535e-2742.21symbol:RPAP2 "Uncharacterized protein" species:903... [more]
-1.303e-2538.04symbol:RPAP2 "Uncharacterized protein" species:982... [more]
-1.019e-1338.82symbol:R08D7.2 species:6239 "Caenorhabditis elegan... [more]
-1.019e-1338.82symbol:R08D7.2 "Putative RNA polymerase II subunit... [more]

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BLAST of EMLSAG00000000696 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 3
Match NameE-valueIdentityDescription
gi|592899568|gb|GAXK01058807.1|1.104e-2846.15TSA: Calanus finmarchicus comp126072_c0_seq1 trans... [more]
gi|592794329|gb|GAXK01160239.1|5.003e-139.39TSA: Calanus finmarchicus comp142829_c2_seq1 trans... [more]
gi|592899642|gb|GAXK01058733.1|6.064e+037.25TSA: Calanus finmarchicus comp6104055_c0_seq1 tran... [more]
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BLAST of EMLSAG00000000696 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000006960.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s110:43467... [more]
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BLAST of EMLSAG00000000696 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
gi|380877128|sp|A8DYY5.1|RPAP2_DROME9.328e-2943.06RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|115503693|sp|Q8VC34.2|RPAP2_MOUSE2.546e-2832.18RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|81882974|sp|Q5I0E6.1|RPAP2_RAT3.896e-2834.38RecName: Full=RNA polymerase II subunit B1 CTD pho... [more]
gi|74750745|sp|Q8IXW5.1|RPAP2_HUMAN5.334e-2837.57RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|75041829|sp|Q5RA37.1|RPAP2_PONAB8.476e-2837.57RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|380877126|sp|F6RRD7.1|RPAP2_BOVIN5.206e-2741.83RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|380877127|sp|B0UYH6.1|RPAP2_DANRE1.358e-2440.00RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|267548|sp|P30641.1|RPAP2_CAEEL7.043e-1438.82RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|74582120|sp|O42853.1|RPAP2_SCHPO6.506e-1137.72RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|380877125|sp|F4K1B1.1|RPAP2_ARATH1.020e-945.71RecName: Full=Putative RNA polymerase II subunit B... [more]

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BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 7
Match NameE-valueIdentityDescription
XP_016768443.19.928e-3043.06PREDICTED: putative RNA polymerase II subunit B1 C... [more]
ABV53661.14.521e-2943.06uncharacterized protein Dmel_CG34183 [Drosophila m... [more]
EDO63560.11.030e-2643.20AGAP008431-PA, partial [Anopheles gambiae str. PES... [more]
gb|EFA00145.2|2.633e-2536.26hypothetical protein TcasGA2_TC002966 [Tribolium c... [more]
gb|KFM57894.1|7.902e-2444.44putative RNA polymerase II subunit B1 CTD phosphat... [more]
EFX69879.11.097e-2239.52hypothetical protein DAPPUDRAFT_300664 [Daphnia pu... [more]
EEB17600.17.403e-2139.57conserved hypothetical protein [Pediculus humanus ... [more]
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BLAST of EMLSAG00000000696 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|63102016|gb|AAH95735.1|8.713e-3328.90RNA polymerase II associated protein 2 [Danio reri... [more]
gi|485050345|ref|NP_001019603.2|8.894e-3328.90putative RNA polymerase II subunit B1 CTD phosphat... [more]
gi|998508367|ref|XP_015514552.1|1.105e-2934.48PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|914554034|gb|KOB64773.1|3.083e-2942.13putative RNA polymerase II associated protein 2 [O... [more]
gi|340716286|ref|XP_003396630.1|3.437e-2948.12PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|808125139|ref|XP_012165680.1|4.326e-2948.48PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|1101334675|ref|XP_018902571.1|6.262e-2941.82PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|815904971|ref|XP_012238380.1|6.803e-2949.22PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|815904969|ref|XP_012238379.1|6.920e-2949.22PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|936573356|ref|XP_014218895.1|8.105e-2940.22PREDICTED: RNA polymerase II subunit B1 CTD phosph... [more]

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BLAST of EMLSAG00000000696 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s110supercontigLSalAtl2s110:434670..436202 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s110-processed-gene-4.16
Biotypeprotein_coding
EvidenceIEA
NotePutative RNA polymerase II subunit B1 CTD phosphatase Rpap2
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000696 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000696EMLSAT00000000696-696543Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s110:434670..436202-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000696-683462 ID=EMLSAG00000000696-683462|Name=EMLSAG00000000696|organism=Lepeophtheirus salmonis|type=gene|length=1533bp|location=Sequence derived from alignment at LSalAtl2s110:434670..436202- (Lepeophtheirus salmonis)
ATGATTGGAAATTCGCAAATTGACTGCGAAATGACGGAGGAAGAAATTTT TGAAATTGCCCGTGAGGCTTTGAAGAGTAAGTCCTCTACAAGCTCCTCCT CTTCGAAGAAAAAACCCTTTAAAAAGTTATCTGAAGAGGAACGTCGTGAA AAAATTCGTACAGGTCTTCTTAGAAAGAAGCAATCGGAGGCTACTGCTTT AGAGATTGTTGAAAAATTATTAGATTCTGAGATTGAATTTCTCTGGTTTG AAGAAGAAGCTCTTCCAAGCTTGAACCAAATGTTTTATAAGGACGTTATA GATGAAAGGAGTTTGCTCAAATTGTGTGGATATCCACTTTGCACTCATTC ACTACCCAAAATCATTCCCCGTCAAAAATATCACATTGTGTCCTCACAAC GAAAAGTCTATGACCTGACGGAACGGAAAAAATTCTGCTCCAATTCCTGC TATAATGCATCCTCTTATATTTTAGAGCAACTTGACAATGAGCCCCTCTG GATGAGAGATGATAAACCAGGGTCAGAGAGGCCAATGATTAAAATCCTTG GAAAAGACTATGGGAAATATCCAGGTGAAGAAATTCCTCTATCACAGGCA GAATCTCCTGAAATTGGGGATACAAAGAGCTTTTGCGATCCAAAAACGCA TGAAGAGATTGAGGATGAATTAGAAAAAGAATTAGAGACTCTACCTGACG TTGAAGAACTCATACAGTCATTAAATATTAATTCAGATGCTCCTATTAGG AATCAAACCCTAATCTCATTGCCTCCTAAGCCCAAAAAGACAAACTCATC TCCGATTGAATTAATTAAATTACGACTCAAAGAGTGGTGTACGACAGATA CTCTTAGATATCTCAAAGGAGACGATTTTGTTTGGTATTCTCTTGTAGAA AATAACTATGGACCCGAGAAGATATTTCAAGTTCTTGGAGAAAATCCGAA TTTATCCCCTGGCATTGCTACTGCCTTCAATGAAATGATTACGGCTGYTA TAATCAATAATAAAGTTACCGAATCTCTGAAGTTCTCATTGGATCCTATG GATAATTTGAAACTAATGACTTTTCTTAAAGGTAGAACAGATATGTGGAT GGACAACGAAAAAGAGAAGGAGGATAATAGTGAATTGCACTTGAGAATGG TTCCAAAAGTAATTAGTCGTACTCAAGTTGTATGGAATCAATTGGACTCT GTGCTACCAGAAATATTGACTTTATTTGGGATTCAAATGCCTGACATATC GGATGATGTTCGAATCCTAATTAAAGGATTTTATTTAACGTCTTCAAATA TTGTTTTTTCAATGCATGAGTGGACATTATTAGCCCTTGTTATTTTAGAG ATGATTCGTGATAAAAATGTTAAACTCAGAACTGTTTTAAAGTCTAAGGA CGCTAAGAAATATTTGAATATGTTATTGTTAAATTTTGATCTGGAAGAAA AGGCAATTTCGAGTATGATCATCAACTCCATTGCTGATATTAACTTACTT ATGCATAAGGGTGCCTTTAAATCAAATGGATAA
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