EMLSAG00000000713, EMLSAG00000000713-683479 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000713
Unique NameEMLSAG00000000713-683479
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000000713 vs. L. salmonis peptides
Match: EMLSAP00000000713 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1110:46956:52499:-1 gene:EMLSAG00000000713 transcript:EMLSAT00000000713 description:"maker-LSalAtl2s1110-augustus-gene-0.29")

HSP 1 Score: 904.82 bits (2337), Expect = 0.000e+0
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0
Query:    1 MQSIEVRDSRKEDMEEDAVGQKFTAMMMKIHILLSLFLFLQSPYLSSSTGTPTHSFYTPVNTGTNHQAGNQVIWSPIEPKKEDGLSIIQHNPHHQSLIQPFSGNAPTSTADNSYVLSEPKSQSNLYVTSGSGRAGGGDNIFKSYSGPSGGGDHVETEALVQFYQRPIGYEITSEKGVPQYGGDQRGGIDPSFTGGETFPPSSHGDLRAKPVNEDNSFHDGYSHFQAQKQNQEASSNDPNKNFEDFEGFGIDEDDGDFRQDFSEDYNDGSKDYNHNHHHQTREHENNLHANPEHNTNNNQRNHGTHSEHHENEYTEPSNSFYDYASQDYREEVSENSGPSAKSPVKFNPYGGFQVYGSPSDSSFEHEDYNKSPSSRENYNDHPNQHDFYNGPEGTPSNGQTRDVIPTLSERMYDDNPSGMKYKHISTRDASNPLRAYNSFINP 442
            MQSIEVRDSRKEDMEEDAVGQKFTAMMMKIHILLSLFLFLQSPYLSSSTGTPTHSFYTPVNTGTNHQAGNQVIWSPIEPKKEDGLSIIQHNPHHQSLIQPFSGNAPTSTADNSYVLSEPKSQSNLYVTSGSGRAGGGDNIFKSYSGPSGGGDHVETEALVQFYQRPIGYEITSEKGVPQYGGDQRGGIDPSFTGGETFPPSSHGDLRAKPVNEDNSFHDGYSHFQAQKQNQEASSNDPNKNFEDFEGFGIDEDDGDFRQDFSEDYNDGSKDYNHNHHHQTREHENNLHANPEHNTNNNQRNHGTHSEHHENEYTEPSNSFYDYASQDYREEVSENSGPSAKSPVKFNPYGGFQVYGSPSDSSFEHEDYNKSPSSRENYNDHPNQHDFYNGPEGTPSNGQTRDVIPTLSERMYDDNPSGMKYKHISTRDASNPLRAYNSFINP
Sbjct:    1 MQSIEVRDSRKEDMEEDAVGQKFTAMMMKIHILLSLFLFLQSPYLSSSTGTPTHSFYTPVNTGTNHQAGNQVIWSPIEPKKEDGLSIIQHNPHHQSLIQPFSGNAPTSTADNSYVLSEPKSQSNLYVTSGSGRAGGGDNIFKSYSGPSGGGDHVETEALVQFYQRPIGYEITSEKGVPQYGGDQRGGIDPSFTGGETFPPSSHGDLRAKPVNEDNSFHDGYSHFQAQKQNQEASSNDPNKNFEDFEGFGIDEDDGDFRQDFSEDYNDGSKDYNHNHHHQTREHENNLHANPEHNTNNNQRNHGTHSEHHENEYTEPSNSFYDYASQDYREEVSENSGPSAKSPVKFNPYGGFQVYGSPSDSSFEHEDYNKSPSSRENYNDHPNQHDFYNGPEGTPSNGQTRDVIPTLSERMYDDNPSGMKYKHISTRDASNPLRAYNSFINP 442          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000713 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000713 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000713 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000007130.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1110:4695... [more]
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BLAST of EMLSAG00000000713 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000713 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000713 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000713 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1110supercontigLSalAtl2s1110:46956..52499 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1110-augustus-gene-0.29
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000713 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000713EMLSAT00000000713-696560Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1110:46956..52499-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000713-683479 ID=EMLSAG00000000713-683479|Name=EMLSAG00000000713|organism=Lepeophtheirus salmonis|type=gene|length=5544bp|location=Sequence derived from alignment at LSalAtl2s1110:46956..52499- (Lepeophtheirus salmonis)
ATGCAATCGATTGAGGTTCGTGATTCAAGGAAAGAGGATATGGAAGAGGA TGCGGTTGGTCAAAAATTTACTGGTGAGACACAGACACGTAACGACATTA ATTATGTCTCATCCAGTCTCTTCCTTTCCATTAAGACACTAACCAATGAT TCAGATGTTTTTTGAATCTCACCGTTTGCATTAATGACTAATTTTATGTA ATATTTATTGCTTTCTTCATCTCAACTGTCACGATCCCTGTTAAGAAGAT CGTAGAGTTGAATGGGGTTAAGGTCTTTTGAAGCTTAAGGCTTCAATTGT TCTTCCATTTTTCCTTCTTTGACCTTTTTCAAGAGATCGTTTTTCAGTAT GGGAATTTGTATCATGAGCTTTCCCTAAAGAGGACATATTGCTCAATTTG GCCTTTGTAAATTATTAGAAATTCACTAACAGTCATGAATATACTAAAAA TAGGCATGGATCCACAGCAGGCACTGGAGAACAAACTGAAATTACAGTTT CTATAGAAAGATTCCATTAAATTTACAAGCTCATGTTTTCGGCCTGAAGT ACGAGCACTTCGACTCTTTAATTCAGAGCGCTGGTCCTTAAGTGTCCAGT TATTGTAGTCTTCCAATGTTTTTCTTTGGTTTATAAGGAAAAATTAGTAG AAACAAGGTCAATACGACTGTCAAACCAGAGTAAAGATTCACAAGTTGGA AATTTATTAAGTGGAATATATGTTTTAATATTTTTGTTTACCTCTAACCA TAACATCTGGTCGGGAAATCTTGCAACTTGGTTAACATCCTCATTGTAGG AGACGGTCTTAGTGTTTTTCCTCCCCTCCCCCCAAATCATTTTANNNNNN NTCTGGGCAAGTACTCCCATCCTTTTATCCCCTAGAGTTTTACTCCCCGA ACCATCTATCCCCCAGTATTTTACCACCAATTCAATAAGTAGCAACTAAA CATTCAATCTTTTCCCAACCATAGAACGTACTTGTTAATATAACTTAATG ATGTAGGTAGTAGTGATGTATCGGACTTCTTTTGACTTAATCTTTCCTAT TTACCAATCAATAGAAAGGATGTTTTATATCGAAAGGGTATTGAAACTAT GCTTTTCTTCCATTCGTTAGGATCCAAAATCCTAATGAGTAGAAGATAGT TAATTGTCACGTAGAATCCCAAAATATGCATAGGATATAAACACATAGAA CTACGATATATATATTACTCCCGAGGCACTAGGAGGGAAGCACAAGTAAA GGATGGATGCGAGCACAGCAAAATTTATGATTATGATAACTGATAAGTTT ATGAAGTACATATGTTGATACATAATACAAATTTATCATATTCATGTAGA CTGACATGGACCCCATCTTGATCTATAACTCTAGTACAATCGTTGATGGA GTTAGAGATTTCAACATTTCTTTATGACATTTTGATGAAAAAATGGATGG ATATGCTAATGGTTCTTTGCAACGGAACGTAGCTGTAGCTTTCCGTGATT CCCTCCCAATGCTTTGAAATCTACGTATTATATATAATTAATGTTTGAAG AATTGTAATTGTCTACCTTGTTTACATTTTTGTTTCTAATATCTCAAAGC TGGAGTATAGCGGTAAAAATTCAAAACAAATATATAACTAAGAAGAATTA GTATTCCTTCTCTTATTATCCAAGGCAAAACAGTACAAGAGGAAAACACT TCAAGGCGAAAGTGGTACAAGGCGAATACGTTACAATGCAAAAACGTAGA AGGCAAAAATGTTCCAGATGAGCCCTCCTAGAACCGTACAGATTGCCTTA TCAGTCTTTTTTTCCTCACCCCTTCAGCCTTTAGGACTGATGCATCGATC TTTCAGACCGACGGTCCTATCTATATTTTTTTTTCTTCACTCATAGCTAG GATTGAAGAATGTAAGAACTAAAAAGATAATGAATGATATAAAGAAGGTA TAATAATATCTACTATCATATGTAAATCCTGTAAATTTCTTTGCTGGCCC GTTTTTTGGAATTGGTAATTTGAAGAATGAACTTTAATTCCCTTAGTTGT AATTATTATTTAATTCCTGAGTAGGGAACATCCTTTCCTAAATAGATGGG ATTATATCCCAAACCTTATTGAAAATTCGTTTGTACTCATAAAGAGCCTG ATAATTTGTTGGAGAGTTGTAATAGCCTTGTTGGACTCAGAGTAGAATTG GGGATCGACATCGAAGTAATTCTAGCAAATTCCCTTGTGTTATCTATTGA TACGTCATTACAACATTTTTTGTTGTTTTCTGTCCATTTGATGTAAATAT ACTCAAACTTGGACCCCCTTTTGAAACATATGATTTACCATGTGAAAATA CTGATTTCGGAAAATATACAGTATTTTTTTCAAATTTTTAACATTGTGAT TTAATTATTGATATTGTCATTGCAAACTTAATTGGGAACTGTTTTCTTAT AATTGAAAATTGAATCGTACTTGTGATTTTTCTAATAAATACAATTATTA CATTAGATGTCAGGAATCTCGTCTGATCAGTATGAAACATAGTCTGAAGT ACATAACTCTGAATTCTGAACAACTTTTACTATTTCATAACTAAAGTATG TATTTGTCTCTCTTTTTGAAATAATTTAATAATTATCATTGTTTTTTTTA AGCAGGGCGTACATTAAACACATACATAAATTATTTTAATACTATGAAGG TACTGTATATGTATATGTATGTTTCATAATATTCAAATTATGCTAATAAA GTATTTTTCGCAGGCCATATGAAATTCATTCACATTTGTTCCACAGGCCT CTTATTGAGAATTCCTGGCCTATGTATTCAAAAAACCAAAGAGTATTCGT AACTGTTTTTTCTATAAGAAGCTGAATTTCTTTAAAGGACTGAATTAGTT TGTTAAAGCCGTAAGGATCTCAGATCGGTCTAGAATTTTCAGACCAAACT GCAACACTAGTGTCTGATCTCTCCTACAATTTGCGCTTAATCCTTATATA TAAATTAAAATATTTCACGTTAAGATTTTAATATTAATTACCCTATAAAC GTATTTTCAGCTTCATCATTGTATGACCCTTGAGAACGTCTTATGATATT ACATTTACGTATAAATATTTTATGATAATGTCAATATTTAGACATATGTA CTTTGTGATGGGATTAGAAGTATGATTATTTATTCCATTCTTTGGGAAGA AAATGTACGTTCCGAACTTTGAACAAGAACATTTAATATTTGATTTTTTT TAAATAATATATTGATTTTTTTTTTAAATTAAATATTTGATTTTTTTTCC AACGACTTTATACTCGAAATTTTTAACAAAAAATTTCATTTCTTTCTAAC CAGCTCTAGATTTTTGATTTTTAAAGTTTATTTTTGGAGTAGGTATTTTA TATTTGATATTTAATTCAAGAATTATTTTTCCAAAAAATTCAGTTTTTTC TGAACACCACTGGATTTTTTGAGAATAGCTTTGGATTTTTAAAATTTTTC GCTGCAATATTTAATATGTGATTTTCCTTACATAAAAATTATATTTGAAA TTTGATTTTAGAAATTTTTTTCCGTAAAATTTCTTATTTTGTAAAAAACT CTGGATTTTTGAAATCCATCTCCAAAAATTGTAATATTTAAATTCTTTTT TTGAAAGATTTTATATTTTAGAATTTCTTTTAGAAATTTTTTTCCAAAAA ATTTATGTTTTATCTCAAACACGTCTGAATTTTTGAATTTTTTTTCAAAC AATTCCTTTTATTCTAATAATTATGGATTTTTAAATCTTTTATACAGAAC ATTTAACATTTGGGATTTTTTTTTTCTAAATTTTATATTTGAAATTTAAT TTTAGAAATTTTTTCATCAAATTTGATTTTCAGATTATTATTTTTCCATT TTTTTGTTTTTTTTTCAAAAAAATCCAAAATCCCCCCCCTCCCCCCAAAA AAATATATATATAATTTTACGGACGCCCCTGAACTTGATTACTACTTTGT TCATCAAGTATATATGCATGTTTTTTTTTCAGCGATAATTTCTATTCCTC CGTTTTACATCCAGTTTTTGAAGGATTTTTGTTATTTTTATTCTCTGTGA TTCTTCTACTGGAGAATGACTTTCCAAAGGAGAAAATGTTATTTCAACAT TTCTATAAAAGATCCACTTCCTGAGCGTCAAGGCATCAGTATTGATATTC ATGATTACAGGAACAGATCTGAGAATTAGGTAAGTCTTTCACCTTTGTTA TTCCTTCATTACATAACTCAGTATCTCACTATTATTAGCTATGATGATGA AGATCCATATCCTCCTATCTCTTTTTCTATTTCTTCAAAGTCCTTATCTT TCAAGCTCCACAGGGACTCCAACCCATAGCTTTTATACACCAGTAAATAC AGGAACGAATCATCAGGCCGGGAATCAAGTGATATGGAGTCCAATCGAAC CTAAAAAAGAAGATGGCCTAAGTATTATACAACACAATCCTCATCATCAA TCCCTGATTCAGCCTTTCAGTGGAAATGCACCCACATCCACAGCAGATAA CTCCTATGTCCTATCCGAACCCAAATCTCAGTCCAATTTATACGTAACTA GCGGAAGTGGAAGAGCAGGTGGTGGAGATAACATATTTAAAAGTTATTCC GGTCCTTCTGGAGGGGGAGATCATGTAGAGACTGAGGCTCTCGTTCAATT TTATCAACGGCCTATAGGATATGAAATAACGAGTGAAAAAGGAGTTCCAC AGTATGGAGGGGATCAGAGAGGAGGGATTGATCCTTCATTCACTGGAGGT GAGACCTTTCCACCTTCAAGTCATGGAGATTTGAGAGCAAAGCCCGTTAA CGAAGACAATAGCTTCCACGATGGATATTCACATTTTCAAGCACAGAAAC AAAACCAAGAAGCGAGTAGCAACGATCCGAACAAGAATTTTGAGGATTTT GAAGGATTTGGAATTGACGAGGATGATGGGGATTTCCGTCAGGATTTTTC GGAAGATTATAACGATGGATCCAAGGATTACAATCACAATCATCATCATC AAACACGTGAGCATGAGAATAACTTGCACGCCAATCCTGAACACAACACT AACAACAATCAGCGCAATCATGGAACCCATAGTGAACATCACGAAAATGA ATACACAGAGCCCTCCAATTCTTTTTACGACTATGCTTCTCAGGATTATA GAGAAGAAGTAAGTGAAAATTCGGGTCCTTCGGCTAAATCGCCAGTTAAA TTTAACCCCTATGGAGGCTTTCAAGTATATGGTAGTCCTTCAGACTCTTC ATTTGAGCATGAAGATTACAATAAGTCTCCTTCTAGCCGAGAGAACTATA ATGATCATCCCAATCAACATGATTTCTATAATGGACCTGAAGGAACTCCA AGTAATGGACAAACAAGGGATGTGATTCCAACGCTCTCTGAGAGGATGTA TGATGATAATCCTTCAGGCATGAAATATAAGCATATTTCTACAAGAGATG CATCAAATCCTCTGAGAGCTTATAATTCATTCATCAATCCTTAA
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