EMLSAG00000000716, EMLSAG00000000716-683482 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000716
Unique NameEMLSAG00000000716-683482
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:cabp1a "calcium binding protein 1a" species:7955 "Danio rerio" [GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF00036 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 ZFIN:ZDB-GENE-041010-36 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 eggNOG:COG5126 GeneTree:ENSGT00740000114946 HOGENOM:HOG000233018 HOVERGEN:HBG012180 OMA:MRQEEKT OrthoDB:EOG7XM303 TreeFam:TF334804 InterPro:IPR015754 PANTHER:PTHR23050:SF21 EMBL:CR376731 EMBL:BC083305 RefSeq:NP_001005962.1 UniGene:Dr.36731 STRING:7955.ENSDARP00000016102 Ensembl:ENSDART00000012391 GeneID:449789 KEGG:dre:449789 CTD:449789 NextBio:20832861 Uniprot:Q5XJJ6)

HSP 1 Score: 45.8246 bits (107), Expect = 2.842e-5
Identity = 23/55 (41.82%), Postives = 33/55 (60.00%), Query Frame = 0 
Query:  106 SFKTIDRNSDGYLSKGEL-----KLANKDSRMVDIEEVMRDADLNMDKRIDYAEY 155
            +FK  D N DG +S GEL     KL  +     D+E+++RD DLN D R+D+ E+
Sbjct:  126 AFKEFDTNGDGEISTGELREAMRKLLGQQVGHRDLEDILRDIDLNGDGRVDFEEF 180
[Close]
BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:tnnc1a "troponin C type 1a (slow)" species:7955 "Danio rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0003231 "cardiac ventricle development" evidence=IMP] [GO:0060048 "cardiac muscle contraction" evidence=IMP] [GO:0014823 "response to activity" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499 PRINTS:PR00450 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 ZFIN:ZDB-GENE-030523-1 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0014823 GO:GO:0060048 HOVERGEN:HBG012180 GeneTree:ENSGT00690000101871 TreeFam:TF318191 GO:GO:0003231 OMA:MNDIYKA OrthoDB:EOG76X61W EMBL:CR354596 EMBL:AF434188 UniGene:Dr.87343 Ensembl:ENSDART00000023537 InParanoid:Q800V7 PRO:PR:Q800V7 Uniprot:Q800V7)

HSP 1 Score: 45.0542 bits (105), Expect = 3.002e-5
Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:  107 FKTIDRNSDGYLSKGELKLANKDSRMV----DIEEVMRDADLNMDKRIDYAEYQIYTSG 161
            F+  D+N+DGY+   ELKL  + +       DIEE+MRD D N D +IDY E+  +  G
Sbjct:  101 FRMFDKNADGYIDLDELKLMLEATGEAITEDDIEELMRDGDKNNDGKIDYDEFLEFMKG 159
[Close]
BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:Tnnc1 "Cardiac troponin C" species:10116 "Rattus norvegicus" [GO:0005861 "troponin complex" evidence=IEA] [GO:0031013 "troponin I binding" evidence=IEA] [GO:0031014 "troponin T binding" evidence=IEA] [GO:0032972 "regulation of muscle filament sliding speed" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0043462 "regulation of ATPase activity" evidence=IEA] [GO:0048306 "calcium-dependent protein binding" evidence=IEA] [GO:0051015 "actin filament binding" evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue morphogenesis" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499 PRINTS:PR00450 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 RGD:1309921 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0043292 GO:GO:0060048 GO:GO:0043462 GO:GO:0002086 GO:GO:0010038 GO:GO:0055010 eggNOG:COG5126 HOGENOM:HOG000233018 HOVERGEN:HBG012180 GeneTree:ENSGT00690000101871 TreeFam:TF318191 CTD:7134 KO:K05865 OMA:MNDIYKA OrthoDB:EOG76X61W GO:GO:0005861 GO:GO:0032972 EMBL:AABR06086374 EMBL:AABR06086375 EMBL:DQ062205 RefSeq:NP_001029277.1 UniGene:Rn.15460 STRING:10116.ENSRNOP00000025606 PaxDb:Q4PP99 Ensembl:ENSRNOT00000025606 GeneID:290561 KEGG:rno:290561 UCSC:RGD:1309921 InParanoid:Q4PP99 NextBio:631210 PRO:PR:Q4PP99 Genevestigator:Q4PP99 Uniprot:Q4PP99)

HSP 1 Score: 44.669 bits (104), Expect = 4.854e-5
Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:  107 FKTIDRNSDGYLSKGELKLANKDSRMV----DIEEVMRDADLNMDKRIDYAEYQIYTSG 161
            F+  D+N+DGY+   ELK+  + +       DIEE+M+D D N D RIDY E+  +  G
Sbjct:  101 FRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
[Close]
BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:Tnnc1 "troponin C type 1 (slow)" species:10116 "Rattus norvegicus" [GO:0002086 "diaphragm contraction" evidence=IDA] [GO:0005509 "calcium ion binding" evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005861 "troponin complex" evidence=IEA;ISO] [GO:0006937 "regulation of muscle contraction" evidence=ISO] [GO:0010038 "response to metal ion" evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=ISO] [GO:0031013 "troponin I binding" evidence=IEA;ISO] [GO:0031014 "troponin T binding" evidence=IEA;ISO] [GO:0032972 "regulation of muscle filament sliding speed" evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity" evidence=IEA;ISO] [GO:0043292 "contractile fiber" evidence=IDA] [GO:0043462 "regulation of ATPase activity" evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding" evidence=IEA;ISO] [GO:0051015 "actin filament binding" evidence=IEA;ISO] [GO:0055010 "ventricular cardiac muscle tissue morphogenesis" evidence=IEA;ISO] [GO:0060048 "cardiac muscle contraction" evidence=ISO;IMP] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001125 InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499 PRINTS:PR00450 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 RGD:1309921 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0043292 GO:GO:0060048 GO:GO:0043462 GO:GO:0002086 GO:GO:0010038 GO:GO:0055010 eggNOG:COG5126 HOGENOM:HOG000233018 HOVERGEN:HBG012180 GeneTree:ENSGT00690000101871 TreeFam:TF318191 CTD:7134 KO:K05865 OMA:MNDIYKA OrthoDB:EOG76X61W GO:GO:0005861 GO:GO:0032972 EMBL:AABR06086374 EMBL:AABR06086375 EMBL:DQ062205 RefSeq:NP_001029277.1 UniGene:Rn.15460 STRING:10116.ENSRNOP00000025606 PaxDb:Q4PP99 Ensembl:ENSRNOT00000025606 GeneID:290561 KEGG:rno:290561 UCSC:RGD:1309921 InParanoid:Q4PP99 NextBio:631210 PRO:PR:Q4PP99 Genevestigator:Q4PP99 Uniprot:Q4PP99)

HSP 1 Score: 44.669 bits (104), Expect = 4.854e-5
Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:  107 FKTIDRNSDGYLSKGELKLANKDSRMV----DIEEVMRDADLNMDKRIDYAEYQIYTSG 161
            F+  D+N+DGY+   ELK+  + +       DIEE+M+D D N D RIDY E+  +  G
Sbjct:  101 FRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
[Close]
BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:Tnnc1 "troponin C, cardiac/slow skeletal" species:10090 "Mus musculus" [GO:0002086 "diaphragm contraction" evidence=ISO] [GO:0005509 "calcium ion binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005861 "troponin complex" evidence=ISO] [GO:0006937 "regulation of muscle contraction" evidence=ISO] [GO:0010038 "response to metal ion" evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO] [GO:0031013 "troponin I binding" evidence=ISO] [GO:0031014 "troponin T binding" evidence=ISO] [GO:0032972 "regulation of muscle filament sliding speed" evidence=IMP] [GO:0042803 "protein homodimerization activity" evidence=ISO] [GO:0043292 "contractile fiber" evidence=ISO] [GO:0043462 "regulation of ATPase activity" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0048306 "calcium-dependent protein binding" evidence=ISO] [GO:0051015 "actin filament binding" evidence=IDA] [GO:0055010 "ventricular cardiac muscle tissue morphogenesis" evidence=ISO] [GO:0060048 "cardiac muscle contraction" evidence=ISO] InterPro:IPR001125 InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499 PRINTS:PR00450 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 MGI:MGI:98779 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0051015 GO:GO:0060048 GO:GO:0043462 GO:GO:0002086 GO:GO:0010038 GO:GO:0055010 eggNOG:COG5126 HOGENOM:HOG000233018 HOVERGEN:HBG012180 GeneTree:ENSGT00690000101871 TreeFam:TF318191 CTD:7134 KO:K05865 OMA:MNDIYKA OrthoDB:EOG76X61W GO:GO:0005861 GO:GO:0032972 EMBL:J04971 EMBL:M29793 EMBL:BC061172 PIR:A32620 RefSeq:NP_033419.1 UniGene:Mm.439921 ProteinModelPortal:P19123 SMR:P19123 IntAct:P19123 MINT:MINT-4138131 STRING:10090.ENSMUSP00000022468 PhosphoSite:P19123 PaxDb:P19123 PRIDE:P19123 Ensembl:ENSMUST00000169169 GeneID:21924 KEGG:mmu:21924 UCSC:uc007sxd.1 InParanoid:P19123 NextBio:301500 PRO:PR:P19123 ArrayExpress:P19123 Bgee:P19123 CleanEx:MM_TNNC1 Genevestigator:P19123 Uniprot:P19123)

HSP 1 Score: 44.669 bits (104), Expect = 4.854e-5
Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:  107 FKTIDRNSDGYLSKGELKLANKDSRMV----DIEEVMRDADLNMDKRIDYAEYQIYTSG 161
            F+  D+N+DGY+   ELK+  + +       DIEE+M+D D N D RIDY E+  +  G
Sbjct:  101 FRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
[Close]
BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:TNNC1 "Troponin C, slow skeletal and cardiac muscles" species:9606 "Homo sapiens" [GO:0002086 "diaphragm contraction" evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0005861 "troponin complex" evidence=IDA] [GO:0006937 "regulation of muscle contraction" evidence=IDA;TAS] [GO:0010038 "response to metal ion" evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0030049 "muscle filament sliding" evidence=TAS] [GO:0031013 "troponin I binding" evidence=IDA;IPI] [GO:0031014 "troponin T binding" evidence=IPI] [GO:0032972 "regulation of muscle filament sliding speed" evidence=ISS] [GO:0042803 "protein homodimerization activity" evidence=IDA] [GO:0043462 "regulation of ATPase activity" evidence=ISS] [GO:0048306 "calcium-dependent protein binding" evidence=IPI] [GO:0051015 "actin filament binding" evidence=ISS] [GO:0055010 "ventricular cardiac muscle tissue morphogenesis" evidence=IMP] [GO:0060048 "cardiac muscle contraction" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001125 InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499 PRINTS:PR00450 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 GO:GO:0005829 GO:GO:0042803 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0051015 Orphanet:155 Orphanet:154 Reactome:REACT_17044 GO:GO:0060048 GO:GO:0030049 GO:GO:0043462 GO:GO:0002086 GO:GO:0010038 DrugBank:DB01244 GO:GO:0055010 eggNOG:COG5126 HOGENOM:HOG000233018 HOVERGEN:HBG012180 GO:GO:0031013 TreeFam:TF318191 DrugBank:DB00922 CTD:7134 KO:K05865 OMA:MNDIYKA OrthoDB:EOG76X61W GO:GO:0005861 GO:GO:0032972 EMBL:X07897 EMBL:M37984 EMBL:AF020769 EMBL:BC030244 RefSeq:NP_003271.1 UniGene:Hs.118845 PDB:1AP4 PDB:1IH0 PDB:1J1D PDB:1J1E PDB:1LXF PDB:1MXL PDB:1OZS PDB:1SPY PDB:1WRK PDB:1WRL PDB:2JT0 PDB:2JT3 PDB:2JT8 PDB:2JTZ PDB:2JXL PDB:2KDH PDB:2KFX PDB:2KGB PDB:2KRD PDB:2L1R PDB:2L98 PDB:3RV5 PDB:3SD6 PDB:3SWB PDB:4GJE PDB:4GJF PDB:4GJG PDBsum:1AP4 PDBsum:1IH0 PDBsum:1J1D PDBsum:1J1E PDBsum:1LXF PDBsum:1MXL PDBsum:1OZS PDBsum:1SPY PDBsum:1WRK PDBsum:1WRL PDBsum:2JT0 PDBsum:2JT3 PDBsum:2JT8 PDBsum:2JTZ PDBsum:2JXL PDBsum:2KDH PDBsum:2KFX PDBsum:2KGB PDBsum:2KRD PDBsum:2L1R PDBsum:2L98 PDBsum:3RV5 PDBsum:3SD6 PDBsum:3SWB PDBsum:4GJE PDBsum:4GJF PDBsum:4GJG ProteinModelPortal:P63316 SMR:P63316 BioGrid:112988 IntAct:P63316 STRING:9606.ENSP00000232975 ChEMBL:CHEMBL2095202 DrugBank:DB01375 PhosphoSite:P63316 DMDM:54042075 PaxDb:P63316 PRIDE:P63316 DNASU:7134 Ensembl:ENST00000232975 GeneID:7134 KEGG:hsa:7134 UCSC:uc003deb.3 GeneCards:GC03M052485 HGNC:HGNC:11943 HPA:CAB002450 HPA:HPA044848 MIM:191040 MIM:611879 MIM:613243 neXtProt:NX_P63316 PharmGKB:PA36632 InParanoid:P63316 PhylomeDB:P63316 ChiTaRS:TNNC1 EvolutionaryTrace:P63316 GeneWiki:Troponin_C_type_1 GenomeRNAi:7134 NextBio:27913 PRO:PR:P63316 ArrayExpress:P63316 Bgee:P63316 CleanEx:HS_TNNC1 Genevestigator:P63316 Uniprot:P63316)

HSP 1 Score: 44.669 bits (104), Expect = 5.559e-5
Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:  107 FKTIDRNSDGYLSKGELKLANKDSRMV----DIEEVMRDADLNMDKRIDYAEYQIYTSG 161
            F+  D+N+DGY+   ELK+  + +       DIEE+M+D D N D RIDY E+  +  G
Sbjct:  101 FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
[Close]
BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:TNNC1 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005861 "troponin complex" evidence=IEA] [GO:0031013 "troponin I binding" evidence=IEA] [GO:0031014 "troponin T binding" evidence=IEA] [GO:0032972 "regulation of muscle filament sliding speed" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0043462 "regulation of ATPase activity" evidence=IEA] [GO:0048306 "calcium-dependent protein binding" evidence=IEA] [GO:0051015 "actin filament binding" evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue morphogenesis" evidence=IEA] [GO:0060048 "cardiac muscle contraction" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499 PRINTS:PR00450 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0060048 GO:GO:0043462 GO:GO:0055010 GeneTree:ENSGT00690000101871 TreeFam:TF318191 KO:K05865 OMA:MNDIYKA OrthoDB:EOG76X61W GO:GO:0005861 GO:GO:0032972 EMBL:AAEX03012197 RefSeq:XP_005632514.1 ProteinModelPortal:E2R9U4 Ensembl:ENSCAFT00000014964 GeneID:476595 NextBio:20852224 Uniprot:E2R9U4)

HSP 1 Score: 44.2838 bits (103), Expect = 6.638e-5
Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:  107 FKTIDRNSDGYLSKGELKLANKDSRMV----DIEEVMRDADLNMDKRIDYAEYQIYTSG 161
            F+  D+N+DGY+   ELK+  + +       DIEE+M+D D N D RIDY E+  +  G
Sbjct:  101 FRMFDKNADGYIDLDELKVMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
[Close]
BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:TNNC1 "Troponin C, slow skeletal and cardiac muscles" species:9031 "Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005861 "troponin complex" evidence=IEA] [GO:0031013 "troponin I binding" evidence=IEA] [GO:0031014 "troponin T binding" evidence=IEA] [GO:0032972 "regulation of muscle filament sliding speed" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0043462 "regulation of ATPase activity" evidence=IEA] [GO:0048306 "calcium-dependent protein binding" evidence=IEA] [GO:0051015 "actin filament binding" evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue morphogenesis" evidence=IEA] [GO:0060048 "cardiac muscle contraction" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499 PRINTS:PR00450 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0060048 GO:GO:0043462 GO:GO:0055010 eggNOG:COG5126 HOGENOM:HOG000233018 HOVERGEN:HBG012180 GeneTree:ENSGT00690000101871 TreeFam:TF318191 CTD:7134 KO:K05865 OMA:MNDIYKA OrthoDB:EOG76X61W GO:GO:0005861 GO:GO:0032972 EMBL:M16024 EMBL:D13037 PIR:A27204 RefSeq:NP_990464.1 UniGene:Gga.3041 PDB:1AJ4 PDB:1DTL PDB:1FI5 PDB:1LA0 PDB:1SBJ PDB:1SCV PDB:2CTN PDB:3CTN PDBsum:1AJ4 PDBsum:1DTL PDBsum:1FI5 PDBsum:1LA0 PDBsum:1SBJ PDBsum:1SCV PDBsum:2CTN PDBsum:3CTN ProteinModelPortal:P09860 SMR:P09860 STRING:9031.ENSGALP00000002212 PaxDb:P09860 PRIDE:P09860 Ensembl:ENSGALT00000002214 GeneID:396032 KEGG:gga:396032 InParanoid:P09860 EvolutionaryTrace:P09860 NextBio:20816094 PRO:PR:P09860 Uniprot:P09860)

HSP 1 Score: 44.2838 bits (103), Expect = 6.638e-5
Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:  107 FKTIDRNSDGYLSKGELKLANKDSRMV----DIEEVMRDADLNMDKRIDYAEYQIYTSG 161
            F+  D+N+DGY+   ELK+  + +       DIEE+M+D D N D RIDY E+  +  G
Sbjct:  101 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
[Close]
BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:TNNC1 "Troponin C, slow skeletal and cardiac muscles" species:9823 "Sus scrofa" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005861 "troponin complex" evidence=IEA] [GO:0031013 "troponin I binding" evidence=IEA] [GO:0031014 "troponin T binding" evidence=IEA] [GO:0032972 "regulation of muscle filament sliding speed" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0043462 "regulation of ATPase activity" evidence=IEA] [GO:0048306 "calcium-dependent protein binding" evidence=IEA] [GO:0051015 "actin filament binding" evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue morphogenesis" evidence=IEA] [GO:0060048 "cardiac muscle contraction" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499 PRINTS:PR00450 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0060048 GO:GO:0043462 GO:GO:0055010 eggNOG:COG5126 HOGENOM:HOG000233018 HOVERGEN:HBG012180 GeneTree:ENSGT00690000101871 TreeFam:TF318191 CTD:7134 KO:K05865 OMA:MNDIYKA OrthoDB:EOG76X61W GO:GO:0005861 GO:GO:0032972 EMBL:AY958072 PIR:JU0035 RefSeq:NP_001123715.1 UniGene:Ssc.3085 PDB:1LJ6 PDBsum:1LJ6 ProteinModelPortal:P63317 SMR:P63317 PaxDb:P63317 Ensembl:ENSSSCT00000012521 GeneID:100156435 KEGG:ssc:100156435 Uniprot:P63317)

HSP 1 Score: 44.2838 bits (103), Expect = 7.368e-5
Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:  107 FKTIDRNSDGYLSKGELKLANKDSRMV----DIEEVMRDADLNMDKRIDYAEYQIYTSG 161
            F+  D+N+DGY+   ELK+  + +       DIEE+M+D D N D RIDY E+  +  G
Sbjct:  101 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
[Close]
BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:TNNC1 "Troponin C, slow skeletal and cardiac muscles" species:9913 "Bos taurus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005861 "troponin complex" evidence=IEA] [GO:0031013 "troponin I binding" evidence=IEA] [GO:0031014 "troponin T binding" evidence=IEA] [GO:0032972 "regulation of muscle filament sliding speed" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0043462 "regulation of ATPase activity" evidence=IEA] [GO:0048306 "calcium-dependent protein binding" evidence=IEA] [GO:0051015 "actin filament binding" evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue morphogenesis" evidence=IEA] [GO:0060048 "cardiac muscle contraction" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499 PRINTS:PR00450 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0060048 GO:GO:0043462 GO:GO:0055010 HOVERGEN:HBG012180 GeneTree:ENSGT00690000101871 TreeFam:TF318191 EMBL:BC102995 PIR:A03018 RefSeq:NP_001029523.1 UniGene:Bt.49083 DisProt:DP00249 ProteinModelPortal:P63315 SMR:P63315 Ensembl:ENSBTAT00000062950 GeneID:509486 KEGG:bta:509486 CTD:7134 KO:K05865 OMA:MNDIYKA OrthoDB:EOG76X61W NextBio:20868986 GO:GO:0005861 GO:GO:0032972 Uniprot:P63315)

HSP 1 Score: 44.2838 bits (103), Expect = 7.368e-5
Identity = 24/59 (40.68%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:  107 FKTIDRNSDGYLSKGELKLANKDSRMV----DIEEVMRDADLNMDKRIDYAEYQIYTSG 161
            F+  D+N+DGY+   ELK+  + +       DIEE+M+D D N D RIDY E+  +  G
Sbjct:  101 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
[Close]
BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592834918|gb|GAXK01122626.1| (TSA: Calanus finmarchicus comp2415630_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 83.1889 bits (204), Expect = 3.966e-19
Identity = 41/100 (41.00%), Postives = 68/100 (68.00%), Query Frame = 0 
Query:   57 EYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQ 156
            E+ NVI  + G+  S E++    ++LP K  + +I ++DF+ + ++S   FKTIDRN DG++S GELKLANK   M DI++ ++  DL++D++++  EYQ
Sbjct:  151 EWFNVIKLQNGVECSREQISKACEHLP-KSKSGKIKIEDFIHLPILSEEVFKTIDRNKDGFISIGELKLANKQYSMRDIDKTIKAHDLDLDRKLNLEEYQ 447
[Close]
BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592916722|gb|GAXK01041653.1| (TSA: Calanus finmarchicus comp325900_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 77.7962 bits (190), Expect = 3.600e-17
Identity = 37/103 (35.92%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:   53 LLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEY 155
            L P E+ NV+  + G+  + EE+  +   LP   D + I ++DF+ + + S  +F+ +DRN DGY++KGELKLA K   M ++++V+++ D++ D ++DY E+
Sbjct:  145 LTPDEFFNVLKLQNGVECTKEEVKTVCGPLPCTKDGK-IKIRDFLYLDIHSESAFRAMDRNKDGYITKGELKLAKKKMTMKEVDQVIKEYDIDQDGKLDYNEF 450
[Close]
BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592907183|gb|GAXK01051192.1| (TSA: Calanus finmarchicus comp2942403_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 73.559 bits (179), Expect = 1.403e-15
Identity = 49/152 (32.24%), Postives = 86/152 (56.58%), Query Frame = 0 
Query:    7 LSTTALIQILARVHGSQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIY 158
            LS +A+ QIL     S+K +K        K I  ++ +   S +  L   E  NV+  +  +    E++  I  +LPR   T ++ + +F+ + +IS  +F  IDRN DG+L+KGE+KL NK++ M ++ EV+ D DL+ D +++ +EY+ +
Sbjct:   74 LSLSAVRQILT---ASRKSLKPEEEEELIKRIEESAKKFDPSGKGELSDKEMFNVLKIQNKVECKQEQVFSICSHLPR-GRTGKMRIAEFINLPIISEETFTAIDRNKDGFLTKGEIKLTNKNASMSEVLEVINDHDLDKDGKLNLSEYRDF 517
[Close]
BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592955360|gb|GAXK01003196.1| (TSA: Calanus finmarchicus comp186710_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 55.8398 bits (133), Expect = 5.106e-9
Identity = 41/140 (29.29%), Postives = 72/140 (51.43%), Query Frame = 0 
Query:    6 LLSTTALIQILARVHG--SQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDAD 143
            LL   AL+Q++ +     ++K  K L    E +C  ++        +  L   +Y +V+  +  + L+  ++  ++  LP  D   +I ++DF    ++S   FK +D+N+DG +SKGELKLA KD  M  I+ +M   D
Sbjct:  271 LLGQPALVQLVDKADNGKNEKEKKELLRKIETQCKSFDG-------KGKLTVDDYYSVLKVQCKVDLTKNDIRKVVADLPM-DKNYKISVQDFCRTPILSDEVFKAMDKNNDGQISKGELKLARKDLTMKQIQSIMSKLD 666
[Close]
BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592955359|gb|GAXK01003197.1| (TSA: Calanus finmarchicus comp186710_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 52.7582 bits (125), Expect = 3.727e-8
Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 0 
Query:   57 EYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDAD 143
            +Y +V+  +  + L+  ++  ++  LP  D   +I ++DF    ++S   FK +D+N+DG +SKGELKLA KD  M  I+ +M   D
Sbjct:  279 DYYSVLKVQCKVDLTKNDIRKVVADLPM-DKNYKISVQDFCRTPILSDEVFKAMDKNNDGQISKGELKLARKDLTMKQIQSIMSKLD 536
[Close]
BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592955361|gb|GAXK01003195.1| (TSA: Calanus finmarchicus comp186710_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 48.521 bits (114), Expect = 2.254e-6
Identity = 31/91 (34.07%), Postives = 54/91 (59.34%), Query Frame = 0 
Query:   57 EYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMR--DADLN 145
            +Y +V+  +  + L+  ++  ++  LP  D   +I ++DF    ++S   FK +D+N+DG +SKGELKLA K+  +  IE ++   DAD N
Sbjct:  279 DYYSVLKVQCKVDLTKNDIRKVVADLPM-DKNYKISVQDFCRTPILSDEVFKAMDKNNDGQISKGELKLARKNLTLKQIEMLISKLDADGN 548
[Close]
BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592814518|gb|GAXK01140050.1| (TSA: Calanus finmarchicus comp687402_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 47.7506 bits (112), Expect = 2.788e-6
Identity = 31/105 (29.52%), Postives = 58/105 (55.24%), Query Frame = 0 
Query:   57 EYLNVINNELGIRLSMEELDGILQYLPRKDDTREILL--KDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDS----RMVDIEEVMRDADLNMDKRIDYAEY 155
            EY+ V   E G+ ++ EE   +  Y   KD  R+ L+  ++F   K ++  +F+ +D NSDGY+SK E+  A++ +       ++E   ++ D N D ++ Y+E+
Sbjct:  125 EYVRVFR-EHGVNITKEE---VSIYFSSKDKDRDGLISYQEFCGRKTVTEKAFEALDINSDGYISKPEMIAASQRTGRRLSKTEVEATFKEYDQNKDNKLSYSEF 427
[Close]
BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592813090|gb|GAXK01141478.1| (TSA: Calanus finmarchicus comp190429_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.4394 bits (106), Expect = 7.935e-6
Identity = 29/109 (26.61%), Postives = 52/109 (47.71%), Query Frame = 0 
Query:   50 RDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIY 158
            +D  L  E    +  + G+  + E++D     + R  D R + L++FM  +      FK +D+N DG+++K E +   K      ++      D N D R+DY E+ I+
Sbjct:  113 KDGKLTTEEWREVLEQSGVNTTQEQVDKFFATMDRDFDGR-LTLEEFMGEETPIEKLFKLMDKNGDGFVTKKEFQTICKKLSKEQVKIAFSQFDTNGDDRLDYREFCIF 436
[Close]
BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592810563|gb|GAXK01144005.1| (TSA: Calanus finmarchicus comp1988307_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 1.609e-5
Identity = 33/107 (30.84%), Postives = 53/107 (49.53%), Query Frame = 0 
Query:   53 LLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTR----EILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEY 155
            L P E+ N++ +  G+  + EE+D     + R  D R    EI+ +D    KL     FK +D+N DGY++K E K   K      ++   +  D N D R++Y E+
Sbjct:   54 LSPEEWKNLLTS-AGLTGTSEEVDHFFATIDRDFDGRLSFAEIMGEDTSVEKL-----FKIMDKNGDGYVTKNEFKTICKKLTKEQVQIAFKKFDTNGDNRLNYREF 356
[Close]
BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592762147|gb|GAXK01192266.1| (TSA: Calanus finmarchicus comp910522_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.8986 bits (102), Expect = 7.022e-5
Identity = 25/103 (24.27%), Postives = 51/103 (49.51%), Query Frame = 0 
Query:   53 LLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEY 155
            +   E+  V+N   G+  +M E+DG  + L +  D + +   +F+  +      F+T+D+N+DG++SK E      +     ++      D N D +++Y E+
Sbjct:  130 ITKAEWFKVLNT-AGVPTTMREVDGFFKILDKDLDGK-LSFSEFLGEESHIERIFRTMDKNNDGFVSKEEFHSVCPNLTAAQVDTAFSTFDTNNDGQLNYREF 432
[Close]
BLAST of EMLSAG00000000716 vs. L. salmonis peptides
Match: EMLSAP00000000716 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1110:72574:73323:1 gene:EMLSAG00000000716 transcript:EMLSAT00000000716 description:"maker-LSalAtl2s1110-augustus-gene-0.27")

HSP 1 Score: 327.791 bits (839), Expect = 1.087e-115
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 
Query:    1 MNNKELLSTTALIQILARVHGSQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIYTSGD 162
            MNNKELLSTTALIQILARVHGSQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIYTSGD
Sbjct:    1 MNNKELLSTTALIQILARVHGSQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIYTSGD 162
[Close]
BLAST of EMLSAG00000000716 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold373_size192110-snap-gene-0.37 (protein:Tk03500 transcript:maker-scaffold373_size192110-snap-gene-0.37-mRNA-1 annotation:"hypothetical protein PRUPE_ppa012426mg")

HSP 1 Score: 72.0182 bits (175), Expect = 1.541e-16
Identity = 45/158 (28.48%), Postives = 94/158 (59.49%), Query Frame = 0 
Query:    6 LLSTTALIQILARVH-GSQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIYTSGD 162
            LL   A+ Q++++++  SQ  ++ +  ++++ C+ ++    + +L +S    ++ NV+  +  + +  +EL  I+  LPR D   +I + DF  + + S  +F+ +D+N DG+++KGE+KLA K   + DI++ ++D DL+ D  ++  E+Q   SGD
Sbjct:   28 LLGIPAVKQVVSKLNKSSQDEVELVQKLYKN-CVQFDHA-GSGTLSES----DFFNVLKIQNKVPIEKDELKAIMAPLPR-DKGGKIKIDDFFTLDIHSSTAFEAMDKNKDGFITKGEMKLAKKSVPLKDIDKCIKDHDLDDDGMLNLDEFQ--KSGD 176
[Close]
BLAST of EMLSAG00000000716 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold373_size192110-snap-gene-0.36 (protein:Tk03503 transcript:maker-scaffold373_size192110-snap-gene-0.36-mRNA-1 annotation:"PREDICTED: calmodulin-4-like")

HSP 1 Score: 51.6026 bits (122), Expect = 8.195e-9
Identity = 31/97 (31.96%), Postives = 56/97 (57.73%), Query Frame = 0 
Query:   60 NVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQ 156
            NV+  +  I  S +++  + + L  KD    + ++DF+ M +IS   F  +D+N DG++SKGELK+A K   M +++ ++   D N D ++ Y E +
Sbjct:   70 NVVKLQNKIDTSKDDIQEVTRDLD-KDADGNVAIEDFVYMPIISESVFAAMDKNKDGFVSKGELKMAQKSLSMSELKSIIDSIDKNSDGQLTYDEVK 165
[Close]
BLAST of EMLSAG00000000716 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold144_size312663-snap-gene-0.7 (protein:Tk07265 transcript:maker-scaffold144_size312663-snap-gene-0.7-mRNA-1 annotation:"Calmodulin")

HSP 1 Score: 51.2174 bits (121), Expect = 9.954e-9
Identity = 33/105 (31.43%), Postives = 62/105 (59.05%), Query Frame = 0 
Query:   57 EYLNVINNELGIRLSMEELDGILQYLPRKDDTRE--ILLKDFMEMKLISPLSFKTIDRNSDGYLSKGE-LKLANKDSRMV---DIEEVMRDADLNMDKRIDYAEY 155
            EY+ V  +  GI ++ +E   ++ +   KD  R+  I  ++F + + ++  +FK +D N+DG++SK E LK +N+ +R +   DIE   R+ D + DK++ Y E+
Sbjct:   43 EYVGVFQDH-GIAITQDE---VMMFFNSKDRDRDGRISYEEFCDKETVNERAFKAMDINNDGFVSKAEMLKASNRSTRRLSADDIEACFREFDKDRDKKLSYEEF 143
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000716 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 24
Match NameE-valueIdentityDescription
-2.842e-541.82symbol:cabp1a "calcium binding protein 1a" species... [more]
-3.002e-542.37symbol:tnnc1a "troponin C type 1a (slow)" species:... [more]
-4.854e-540.68symbol:Tnnc1 "Cardiac troponin C" species:10116 "R... [more]
-4.854e-540.68symbol:Tnnc1 "troponin C type 1 (slow)" species:10... [more]
-4.854e-540.68symbol:Tnnc1 "troponin C, cardiac/slow skeletal" s... [more]
-5.559e-540.68symbol:TNNC1 "Troponin C, slow skeletal and cardia... [more]
-6.638e-540.68symbol:TNNC1 "Uncharacterized protein" species:961... [more]
-6.638e-540.68symbol:TNNC1 "Troponin C, slow skeletal and cardia... [more]
-7.368e-540.68symbol:TNNC1 "Troponin C, slow skeletal and cardia... [more]
-7.368e-540.68symbol:TNNC1 "Troponin C, slow skeletal and cardia... [more]

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592834918|gb|GAXK01122626.1|3.966e-1941.00TSA: Calanus finmarchicus comp2415630_c0_seq1 tran... [more]
gi|592916722|gb|GAXK01041653.1|3.600e-1735.92TSA: Calanus finmarchicus comp325900_c0_seq1 trans... [more]
gi|592907183|gb|GAXK01051192.1|1.403e-1532.24TSA: Calanus finmarchicus comp2942403_c0_seq1 tran... [more]
gi|592955360|gb|GAXK01003196.1|5.106e-929.29TSA: Calanus finmarchicus comp186710_c0_seq2 trans... [more]
gi|592955359|gb|GAXK01003197.1|3.727e-834.48TSA: Calanus finmarchicus comp186710_c0_seq3 trans... [more]
gi|592955361|gb|GAXK01003195.1|2.254e-634.07TSA: Calanus finmarchicus comp186710_c0_seq1 trans... [more]
gi|592814518|gb|GAXK01140050.1|2.788e-629.52TSA: Calanus finmarchicus comp687402_c0_seq1 trans... [more]
gi|592813090|gb|GAXK01141478.1|7.935e-626.61TSA: Calanus finmarchicus comp190429_c0_seq1 trans... [more]
gi|592810563|gb|GAXK01144005.1|1.609e-530.84TSA: Calanus finmarchicus comp1988307_c0_seq1 tran... [more]
gi|592762147|gb|GAXK01192266.1|7.022e-524.27TSA: Calanus finmarchicus comp910522_c0_seq1 trans... [more]

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BLAST of EMLSAG00000000716 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000007161.087e-115100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1110:7257... [more]
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BLAST of EMLSAG00000000716 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000716 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000716 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000716 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
maker-scaffold373_size192110-snap-gene-0.371.541e-1628.48protein:Tk03500 transcript:maker-scaffold373_size1... [more]
maker-scaffold373_size192110-snap-gene-0.368.195e-931.96protein:Tk03503 transcript:maker-scaffold373_size1... [more]
maker-scaffold144_size312663-snap-gene-0.79.954e-931.43protein:Tk07265 transcript:maker-scaffold144_size3... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1110supercontigLSalAtl2s1110:72574..73323 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1110-augustus-gene-0.27
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000716 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000716EMLSAT00000000716-696563Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1110:72574..73323+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000716-683482 ID=EMLSAG00000000716-683482|Name=EMLSAG00000000716|organism=Lepeophtheirus salmonis|type=gene|length=750bp|location=Sequence derived from alignment at LSalAtl2s1110:72574..73323+ (Lepeophtheirus salmonis)
ATAAAGTCTAGTAAGAAAATATGAACAACAAAGAACTCCTAAGCACAACA
GCTTTAATCCAAATCCTTGCACGAGTCCATGGCTCTCAAAAGTGTATAAA
ATCCCTCTCAAGTATTTTTGAAGATAAATGCATACACTACAATAGTGTTG
AAGATACTGCGAGTCTCAGAGACTCCTTACTACCTTGTGAGTATTTAAAC
GTGATTAACAATGAACTAGGGATTCGTTTGAGTATGGAAGAGCTAGATGG
GATTCTACAATATCTTCCACGGAAGGATGATACGCGAGAAATACTCTTAA
AGGATTTCATGGAAATGAAGTTGATTTCCCCCCTTAGTTTTAAAGTAAGG
AAACCTCAAGTATTTTTCCATTTATATTGAACCTATTTTTACAAATTAAC
GTTATAATAATTTACACCATATAGACGATAGATCGTAATAGTGATGGATA
CCTTTCAAAAGGTGAGCTCAAATTAGCGAATAAGGATAGTAGAATGGTGG
ATATAGAAGAAGTCATGAGGGACGCAGATCTCAACATGGATAAAAGGATT
GACTATGCAGAGTATCAAATTTATACAAGTGGTGATTAAAGAACTAATAC
ACAAAAATCTTGGTTTATTTTTTGCATACAAAACATCAATGGACCAGGAC
CAAGGTTTATGATGATGTCATCGAATTGAAATAAATAACGCCTCATGTAT
GAAGGCGTATGATTATTTACTGTTTAGTATTATAAAAAATATATTGCGAA
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