EMLSAG00000000819, EMLSAG00000000819-683585 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000819 vs. C. finmarchicus
Match: gi|592885959|gb|GAXK01072416.1| (TSA: Calanus finmarchicus comp922728_c0_seq1 transcribed RNA sequence) HSP 1 Score: 44.669 bits (104), Expect = 7.939e-5 Identity = 35/122 (28.69%), Postives = 57/122 (46.72%), Query Frame = 0 Query: 35 GVSYFMETSDCRFNLIPLYLIISN-SLFLATSIFRIICLHDAVRSLRDGDLIGLFIGVGNLVILCWGTFVLFGYGKFEKWNLE----KSDPY---YCDHAPVVIALANLIAAWVLIPLFVFV 148 G +YF+ + + L I+S S LA ++ C L G + + V +LV+L WG+ V+FG + W + DP +C++ P+V A LI W+LIPL + + Sbjct: 413 GAAYFLYVAGITILVTNLVNIVSKISKHLAEKDGKVTCGEKCGLGLLTG--VSSILMVVDLVMLIWGSVVVFG--AWSSWTYDYKNYAEDPEKYNFCEYQPMVTAFVILIIKWILIPLMIML 766
BLAST of EMLSAG00000000819 vs. C. finmarchicus
Match: gi|592932202|gb|GAXK01026351.1| (TSA: Calanus finmarchicus comp18486_c2_seq1 transcribed RNA sequence) HSP 1 Score: 43.5134 bits (101), Expect = 1.491e-4 Identity = 29/109 (26.61%), Postives = 53/109 (48.62%), Query Frame = 0 Query: 53 YLIISNSLFLATSIFRIICLHDAVRSLRDGDL-------IGLF------IGVGNLVILCWGTFVLFG-----YGKFEKWNLEKSDPYYCDHAPVVIALANLIAAWVLIP 143 YL ++ + L T++ I+ + RDG + +GL + + ++VIL WG+ V+FG ++++ + + YC + P++ A LI WVLIP Sbjct: 277 YLYVAGIVLLVTNLIHIMSRVSQYLAERDGKISCGEACGLGLLKFGSGIMTIADIVILIWGSVVVFGAWASWTDDYDEYVADTENKNYCAYEPMMYAFVILIIKWVLIP 603
BLAST of EMLSAG00000000819 vs. C. finmarchicus
Match: gi|592916430|gb|GAXK01041945.1| (TSA: Calanus finmarchicus comp755706_c0_seq1 transcribed RNA sequence) HSP 1 Score: 42.3578 bits (98), Expect = 2.080e-4 Identity = 37/157 (23.57%), Postives = 66/157 (42.04%), Query Frame = 0 Query: 14 WSIFGFPSVSTVLTNIALLYCGVSYFMETSDCRFNLIPLYLIISNSLFLATSIFRIICLHDAVRSLRDGDL-------------IGLFIGVGNLVILCWGTFVLFGYGKFEKWNLEKSD---PYYCDHAPVVIALANLIAAWVLIPLFVFVELYKLF 154 W + G ++ V I ++ SYF DC N YL I + L + ++ + + DG + + F+ + + + L WG+ V+F + +W E++ YC P++ A L+ WVL+P+F+ V K F Sbjct: 37 WLLIG-RALEQVTIGIVMVAIASSYF---DDCN-NGATTYLFIGGVIILVANFMALLLVGSKKIAEMDGKITCGEKCGLYFMASVAGFMTIVDFLTLIWGSIVVFS--AWSEWTNEEASHALDLYCAKTPMLFAFVTLVIRWVLVPVFITVACLKAF 486
BLAST of EMLSAG00000000819 vs. C. finmarchicus
Match: gi|592940382|gb|GAXK01018171.1| (TSA: Calanus finmarchicus comp33930_c4_seq1 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 3.125e-3 Identity = 30/112 (26.79%), Postives = 53/112 (47.32%), Query Frame = 0 Query: 53 YLIISNSLFLATSIFRIICLHDAVRSLRDGD----------LIGL---FIGVGNLVILCWGTFVLFG-----YGKFEKWNLEKSDPYYCDHAPVVIALANLIAAWVLIPLFV 146 YL ++ + L +++ R++ + SL DG LI L + + ++VIL WG+ V+F +E++ + YC + P++ A LIA W L+P V Sbjct: 375 YLYVAGIVLLVSNLIRLVFVVAQHLSLLDGKISNGEKWCLWLIKLCYSVVAIADVVILIWGSVVVFTAWATWTDNYEEYAADVKYYNYCAYEPMMYAFVILIAKWALVPCLV 710
BLAST of EMLSAG00000000819 vs. C. finmarchicus
Match: gi|592940376|gb|GAXK01018177.1| (TSA: Calanus finmarchicus comp33930_c4_seq7 transcribed RNA sequence) HSP 1 Score: 38.1206 bits (87), Expect = 1.056e-2 Identity = 31/106 (29.25%), Postives = 52/106 (49.06%), Query Frame = 0 Query: 54 LIISNSLFLATSIFRIICLHDAVRSLRDGD-----LIGLFIGV---GNLVILCWGTFVLFGYGK-----FEKWNLEKSDPYYCDHAPVVIALANLIAAWVLIPLFV 146 L++SN + + ++ + I D +R G+ LI L GV ++VIL WG+ V+F +E++ + YC + P++ A LIA W L+P V Sbjct: 295 LLVSNLIRVVFAVAKQIAELDG--KIRRGEHCCLRLINLSQGVVSIADVVILIWGSVVVFSAWATWTYNYEEYTEDVKYKNYCAYEPMMYAFVILIAKWALVPCLV 606
BLAST of EMLSAG00000000819 vs. C. finmarchicus
Match: gi|592951065|gb|GAXK01007488.1| (TSA: Calanus finmarchicus comp658162_c0_seq2 transcribed RNA sequence) HSP 1 Score: 38.1206 bits (87), Expect = 1.218e-2 Identity = 18/59 (30.51%), Postives = 33/59 (55.93%), Query Frame = 0 Query: 89 IGVGNLVILCWGTFVLFGYGKFEKW-NLEKSDPYYCDHAPVVIALANLIAAWVLIPLFV 146 +G+ LV L WG+ V+FG + W + + + ++C P++ A L+ WV+ PL + Sbjct: 373 LGIAALVTLIWGSVVVFG--SWADWTSTDLTSQHFCKETPMMFAFVLLLINWVMFPLMI 543
BLAST of EMLSAG00000000819 vs. C. finmarchicus
Match: gi|592825275|gb|GAXK01129914.1| (TSA: Calanus finmarchicus comp70264_c2_seq1 transcribed RNA sequence) HSP 1 Score: 37.7354 bits (86), Expect = 1.261e-2 Identity = 33/115 (28.70%), Postives = 52/115 (45.22%), Query Frame = 0 Query: 53 YLIISNSLFLATSIFRIICLHDAVRSLRDGDL-----IGLFI--------GVGNLVILCWGTFVLFG--------YGKFEKWNLEKSDPY-YCDHAPVVIALANLIAAWVLIPLF 145 YL I L ++ ++ + RDG++ GL++ V ++V+L WG+ V+FG Y KF L D Y YC + P++ A L+ WV+IPL Sbjct: 290 YLYIGGICILVANLVNVVSKVSQFMAERDGNVSCCERCGLWLLGAASGLMAVVDVVMLIWGSIVVFGAWATWTDDYDKF----LADPDIYNYCAYEPMMWAFGILVTKWVMIPLM 622
BLAST of EMLSAG00000000819 vs. C. finmarchicus
Match: gi|592825278|gb|GAXK01129911.1| (TSA: Calanus finmarchicus comp70264_c1_seq2 transcribed RNA sequence) HSP 1 Score: 37.7354 bits (86), Expect = 1.261e-2 Identity = 33/115 (28.70%), Postives = 52/115 (45.22%), Query Frame = 0 Query: 53 YLIISNSLFLATSIFRIICLHDAVRSLRDGDL-----IGLFI--------GVGNLVILCWGTFVLFG--------YGKFEKWNLEKSDPY-YCDHAPVVIALANLIAAWVLIPLF 145 YL I L ++ ++ + RDG++ GL++ V ++V+L WG+ V+FG Y KF L D Y YC + P++ A L+ WV+IPL Sbjct: 143 YLYIGGICILVANLVNVVSKVSQFMAERDGNVSCCERCGLWLLGAASGLMAVVDVVMLIWGSIVVFGAWATWTDDYDKF----LADPDIYNYCAYEPMMWAFGILVTKWVMIPLM 475
BLAST of EMLSAG00000000819 vs. C. finmarchicus
Match: gi|592825279|gb|GAXK01129910.1| (TSA: Calanus finmarchicus comp70264_c1_seq1 transcribed RNA sequence) HSP 1 Score: 37.7354 bits (86), Expect = 1.333e-2 Identity = 33/115 (28.70%), Postives = 52/115 (45.22%), Query Frame = 0 Query: 53 YLIISNSLFLATSIFRIICLHDAVRSLRDGDL-----IGLFI--------GVGNLVILCWGTFVLFG--------YGKFEKWNLEKSDPY-YCDHAPVVIALANLIAAWVLIPLF 145 YL I L ++ ++ + RDG++ GL++ V ++V+L WG+ V+FG Y KF L D Y YC + P++ A L+ WV+IPL Sbjct: 250 YLYIGGICILVANLVNVVSKVSQFMAERDGNVSCCERCGLWLLGAASGLMAVVDVVMLIWGSIVVFGAWATWTDDYDKF----LADPDIYNYCAYEPMMWAFGILVTKWVMIPLM 582
BLAST of EMLSAG00000000819 vs. C. finmarchicus
Match: gi|592940378|gb|GAXK01018175.1| (TSA: Calanus finmarchicus comp33930_c4_seq5 transcribed RNA sequence) HSP 1 Score: 37.7354 bits (86), Expect = 1.566e-2 Identity = 20/63 (31.75%), Postives = 33/63 (52.38%), Query Frame = 0 Query: 89 IGVGNLVILCWGTFVLFG-----YGKFEKWNLEKSDPYYCDHAPVVIALANLIAAWVLIPLFV 146 + + +LVIL WG+ V+F +E++ + YC + P++ A LIA W L+P V Sbjct: 446 VAIADLVILIWGSVVVFTAWATWTDNYEEYAADVKYYNYCAYEPMMYAFVILIAKWALVPCLV 634
BLAST of EMLSAG00000000819 vs. L. salmonis peptides
Match: EMLSAP00000000819 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1136:40099:40823:-1 gene:EMLSAG00000000819 transcript:EMLSAT00000000819 description:"maker-LSalAtl2s1136-augustus-gene-1.61") HSP 1 Score: 393.66 bits (1010), Expect = 8.646e-141 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 Query: 1 PTKVYQYNKPSLLWSIFGFPSVSTVLTNIALLYCGVSYFMETSDCRFNLIPLYLIISNSLFLATSIFRIICLHDAVRSLRDGDLIGLFIGVGNLVILCWGTFVLFGYGKFEKWNLEKSDPYYCDHAPVVIALANLIAAWVLIPLFVFVELYKLFRACTMRMSKSNNNPVQKRQSRIQPNGFHNASLKLNGIV 192 PTKVYQYNKPSLLWSIFGFPSVSTVLTNIALLYCGVSYFMETSDCRFNLIPLYLIISNSLFLATSIFRIICLHDAVRSLRDGDLIGLFIGVGNLVILCWGTFVLFGYGKFEKWNLEKSDPYYCDHAPVVIALANLIAAWVLIPLFVFVELYKLFRACTMRMSKSNNNPVQKRQSRIQPNGFHNASLKLNGIV Sbjct: 1 PTKVYQYNKPSLLWSIFGFPSVSTVLTNIALLYCGVSYFMETSDCRFNLIPLYLIISNSLFLATSIFRIICLHDAVRSLRDGDLIGLFIGVGNLVILCWGTFVLFGYGKFEKWNLEKSDPYYCDHAPVVIALANLIAAWVLIPLFVFVELYKLFRACTMRMSKSNNNPVQKRQSRIQPNGFHNASLKLNGIV 192 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000819 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000819 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000819 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000819 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000819 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000819 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000819 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1136:40099..40823- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000819-683585 ID=EMLSAG00000000819-683585|Name=EMLSAG00000000819|organism=Lepeophtheirus salmonis|type=gene|length=725bp|location=Sequence derived from alignment at LSalAtl2s1136:40099..40823- (Lepeophtheirus salmonis)back to top Add to Basket
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