EMLSAG00000000858, EMLSAG00000000858-683624 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000858
Unique NameEMLSAG00000000858-683624
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592953585|gb|GAXK01004968.1| (TSA: Calanus finmarchicus comp348412_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 79.337 bits (194), Expect = 1.840e-18
Identity = 40/78 (51.28%), Postives = 47/78 (60.26%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKSTLN-GAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPP 113
            +C CQC SL FRD  GK+HGNCKS  + GAQWCY+    YS C DL  S +F    WS  ACATP   S  C+ +  P
Sbjct:  146 NCGCQCSSLTFRDEYGKVHGNCKSVDDKGAQWCYISSTHYSSCEDLQLSAKFPNNPWSYTACATPDLSSYECQALSIP 379
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932379|gb|GAXK01026174.1| (TSA: Calanus finmarchicus comp18158_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 75.485 bits (184), Expect = 1.404e-16
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:   36 NDCNCQCISLQFRDSKGKIHGNCKSTL-NGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFV 115
             +C CQC SL FRD+ G + GNCK+    GAQWCYV     S C DL  S+RF    WS  ACATP   S +C  V+PP V
Sbjct:  127 TNCGCQCSSLTFRDTSGTVQGNCKTVDGTGAQWCYVDSSSSS-CQDLVPSERFPHNPWSYEACATPDLGSALCP-VYPPVV 363
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932380|gb|GAXK01026173.1| (TSA: Calanus finmarchicus comp18158_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 73.559 bits (179), Expect = 7.522e-16
Identity = 40/81 (49.38%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:   36 NDCNCQCISLQFRDSKGKIHGNCKSTL-NGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFV 115
             +C CQC +L FRD+ G + GNCK+    GAQWCYV     S C DL  S+RF    WS  ACATP   S +C  V+PP V
Sbjct:  190 TNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVD-SSSSSCQDLVPSERFPHNPWSYEACATPDLGSALCP-VYPPVV 426
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932381|gb|GAXK01026172.1| (TSA: Calanus finmarchicus comp18158_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 73.9442 bits (180), Expect = 1.346e-15
Identity = 42/95 (44.21%), Postives = 52/95 (54.74%), Query Frame = 0 
Query:   36 NDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVRETAFASSASSKNV 129
             +C CQC SL FRDS   I GNCK+    GAQWCYV    +S C DL  SQRF    WS  ACATP+  S +C   +P +     +   A+  +V
Sbjct:  124 TNCGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVD-SSHSSCQDLVPSQRFPHNPWSYEACATPALGSHICPN-YPAYPSHPTYPHPAAPTDV 402
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932382|gb|GAXK01026171.1| (TSA: Calanus finmarchicus comp18158_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 71.2478 bits (173), Expect = 1.305e-14
Identity = 39/95 (41.05%), Postives = 52/95 (54.74%), Query Frame = 0 
Query:   36 NDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVRETAFASSASSKNV 129
             +C CQC +L FRD+ G + GNCK+    GAQWCYV     S C DL  S+RF    WS  ACATP+  S +C   +P +     +   A+  +V
Sbjct:  190 TNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVDSSSSS-CQDLVPSERFPHNPWSYEACATPALGSHICPN-YPAYPSHPTYPHPAAPTDV 468
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932365|gb|GAXK01026188.1| (TSA: Calanus finmarchicus comp18158_c2_seq13 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 2.648e-14
Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLG-RSQRFSGRYWSNHACATPS 101
            +C CQC +L FRD  GK HGNCKS+   GA WCYV   + S C DL   S RF G+ WS  ACATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932366|gb|GAXK01026187.1| (TSA: Calanus finmarchicus comp18158_c2_seq12 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 3.260e-14
Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLG-RSQRFSGRYWSNHACATPS 101
            +C CQC +L FRD  GK HGNCKS+   GA WCYV   + S C DL   S RF G+ WS  ACATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592906544|gb|GAXK01051831.1| (TSA: Calanus finmarchicus comp28981_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 68.5514 bits (166), Expect = 4.485e-14
Identity = 38/71 (53.52%), Postives = 42/71 (59.15%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPV 106
            +  CQC SL F DS G I GNCKS    GAQWCYV +  +S C DL  S RF    WS  ACATP+   PV
Sbjct:  365 NIGCQCSSLTFIDSSGHIQGNCKSVDHTGAQWCYVDH-LHSSCQDLVHSARFPNNPWSYEACATPAVYQPV 574
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592772445|gb|GAXK01182123.1| (TSA: Calanus finmarchicus comp899023_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 7.674e-14
Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKSTLN-GAQWCYVKYDKY----SPCPDLGRSQRFSGRYWSNHACATPSEDSPVCK 108
            +C CQC + +  D  G++ GNC S  N GA WCYV+  ++    S C DL RSQRF  ++WS  AC+TPS  S  C+
Sbjct:  104 NCGCQCSNYRVMDRYGELQGNCDSVDNTGAAWCYVEQGEFVKTQSTCQDLKRSQRFPAKFWSYEACSTPSIYSTQCQ 334
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592848675|gb|GAXK01108869.1| (TSA: Calanus finmarchicus comp296545_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 67.781 bits (164), Expect = 7.875e-14
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATP 100
            +C+CQC SL F+D  G+I GNC S    GA+WCYV    +S C DL  S RF    WS  ACATP
Sbjct:  217 NCDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLHHSARFPQNPWSYEACATP 411
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000000858 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1146:143094:143555:-1 gene:EMLSAG00000000858 transcript:EMLSAT00000000858 description:"maker-LSalAtl2s1146-augustus-gene-0.4")

HSP 1 Score: 280.411 bits (716), Expect = 6.733e-98
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 
Query:    1 MSLGIKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVRETAFASSASSKNVADGVV 134
            MSLGIKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVRETAFASSASSKNVADGVV
Sbjct:    1 MSLGIKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVRETAFASSASSKNVADGVV 134
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000001834 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:34086:34563:-1 gene:EMLSAG00000001834 transcript:EMLSAT00000001834 description:"maker-LSalAtl2s1318-augustus-gene-0.14")

HSP 1 Score: 176.022 bits (445), Expect = 6.069e-57
Identity = 95/135 (70.37%), Postives = 111/135 (82.22%), Query Frame = 0 
Query:    1 MSLGIKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVRETAF--ASSASSKNVADGV 133
            MSLGIKFL+    L+ F+H+QN Q+AAAAAPAPGG+DCNCQCISLQFRDS+G+ +GNC+ST NGAQWCYVKYD +SPCPDL  SQRF GRYWSNHA ATP+E+SP+ + VFPPF+   A   ASS  SKNVAD V
Sbjct:    1 MSLGIKFLILSXVLVGFSHSQNIQEAAAAAPAPGGDDCNCQCISLQFRDSRGRTYGNCRSTTNGAQWCYVKYDGFSPCPDLRVSQRFRGRYWSNHAXATPAENSPIXRSVFPPFIPLXAXXPASSVPSKNVADDV 135
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000000311 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:206967:207933:1 gene:EMLSAG00000000311 transcript:EMLSAT00000000311 description:"maker-LSalAtl2s1046-augustus-gene-1.15")

HSP 1 Score: 170.244 bits (430), Expect = 2.606e-54
Identity = 94/136 (69.12%), Postives = 110/136 (80.88%), Query Frame = 0 
Query:    1 MSLGIKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFV--RETAFASSASSKNVADGVV 134
            MSLGIKFLL    L+ F HAQN+++AAAAAP PGG+DCNCQ ISL FRDS+G IHGNCKS +NGAQWCYVKYD++SPCPDL  SQRF GRYWSNHACATP E+SP+C    PPF+    ++ ASSA SKNV+D V+
Sbjct:   21 MSLGIKFLLLSGVLVGFVHAQNKKQAAAAAPDPGGDDCNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYDRFSPCPDLRASQRFRGRYWSNHACATPPENSPICSSELPPFIPFSASSSASSAPSKNVSDDVL 156
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000001837 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:72145:72812:1 gene:EMLSAG00000001837 transcript:EMLSAT00000001837 description:"maker-LSalAtl2s1318-augustus-gene-0.12")

HSP 1 Score: 168.318 bits (425), Expect = 7.602e-54
Identity = 83/134 (61.94%), Postives = 108/134 (80.60%), Query Frame = 0 
Query:    1 MSLGIKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVR-ETAFASSASSKNVADGV 133
            M LG+ F+L  A L+ F+H+Q+ Q+A AAAPAPGG DCNCQC+SL+FRDS+G  +GNC+ST+NGAQWCYVKYD++SPCPDL  S+RF+GRYWSNHACATP+E+SP C++   P V   ++ ASS ++  VAD V
Sbjct:    1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECRFSTRPSVPFASSPASSVANSGVADDV 134
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000002406 (pep:novel supercontig:LSalAtl2s:LSalAtl2s145:1581187:1602244:-1 gene:EMLSAG00000002406 transcript:EMLSAT00000002406 description:"maker-LSalAtl2s145-augustus-gene-16.13")

HSP 1 Score: 103.99 bits (258), Expect = 1.037e-28
Identity = 50/95 (52.63%), Postives = 57/95 (60.00%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVRETAFASSASSKNVAD 131
            +C CQCI LQ+ D KG +HGNC ST +GA WCYVKY K SPC DL +S  F  RYWS HAC TP EDS +CK    P     A+  S       D
Sbjct:   54 NCLCQCIPLQYVDRKGIMHGNCTSTNDGALWCYVKYQKSSPCGDLVKSDIFQDRYWSYHACTTPVEDSSICKDTVIPLFFLGAYGGSRRDSQPKD 148
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000000366 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1053:57010:58418:-1 gene:EMLSAG00000000366 transcript:EMLSAT00000000366 description:"snap-LSalAtl2s1053-processed-gene-0.45")

HSP 1 Score: 97.8265 bits (242), Expect = 1.643e-26
Identity = 49/103 (47.57%), Postives = 61/103 (59.22%), Query Frame = 0 
Query:    5 IKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVC 107
            ++ +  G  L    +  N Q+ A A P     DC CQCI+L F D  G+  GNC+ST NGAQWCYV+ D  S CP L RS R+ G+Y+SNHAC T    SP C
Sbjct:    1 MRGIYIGIVLATCVYWSNAQQFAPA-PINSQADCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGXSSCPXLKRSTRYRGKYYSNHACITLPAYSPEC 102
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000005911 (pep:novel supercontig:LSalAtl2s:LSalAtl2s31:1336906:1338922:-1 gene:EMLSAG00000005911 transcript:EMLSAT00000005911 description:"maker-LSalAtl2s31-augustus-gene-12.7")

HSP 1 Score: 85.1149 bits (209), Expect = 1.523e-21
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 0 
Query:    7 FLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYD--KYSPCPDLGRSQRFSGRYWSNHACATPS 101
            FLL G  L++ + AQ   KAAA A +   NDC CQC SL FRD   +++GNC++T  GAQWCY+  +  +   CPD   S+R  G+ WS  +CATP+
Sbjct:   10 FLLIGV-LLSKSEAQTVLKAAAPA-STSINDCFCQCSSLTFRDRNNRVNGNCRTTFQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPT 104
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000001327 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:219743:221280:1 gene:EMLSAG00000001327 transcript:EMLSAT00000001327 description:"maker-LSalAtl2s1223-augustus-gene-2.67")

HSP 1 Score: 83.1889 bits (204), Expect = 6.512e-21
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 0 
Query:   16 AFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYD--KYSPCPDLGRSQRFSGRYWSNHACATPS 101
            + + AQ   KAAA  PA    DC CQC SL FRD   +++GNC++T NG QWCY+  +  +   CPD   S RF G+ WS  +CATPS
Sbjct:    1 SLSEAQTVLKAAA--PANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPS 86
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000004889 (pep:novel supercontig:LSalAtl2s:LSalAtl2s257:179358:180381:1 gene:EMLSAG00000004889 transcript:EMLSAT00000004889 description:"maker-LSalAtl2s257-augustus-gene-1.12")

HSP 1 Score: 59.6918 bits (143), Expect = 1.555e-12
Identity = 38/88 (43.18%), Postives = 48/88 (54.55%), Query Frame = 0 
Query:   14 LMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATP 100
            ++  + AQN       AP+   N C CQC SL F DS G+I GNC+S    GA+WCY+ +     C D   S RF  + WS  ACATP
Sbjct:    1 MLTLSSAQN--GIILKAPSLVQN-CGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSH--TCNDAQYSSRFRNQ-WSYEACATP 82
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000012322 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290:1311781:1 gene:EMLSAG00000012322 transcript:EMLSAT00000012322 description:"augustus_masked-LSalAtl2s8-processed-gene-15.4")

HSP 1 Score: 59.6918 bits (143), Expect = 3.452e-12
Identity = 40/101 (39.60%), Postives = 50/101 (49.50%), Query Frame = 0 
Query:   13 FLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFP 112
             L A       Q     AP+   N C CQC S  FRD  G+  GNC+ST  +GA+WC+V+    + C D   +  F GR  SN ACATP      C  +FP
Sbjct:    7 LLSALVAYVTSQGITLKAPSLAIN-CGCQCDSFIFRDRFGQTQGNCRSTDRSGARWCFVRPG--NTCTD---TSFFRGRTISNEACATPR-----CGNIFP 96
[Close]
BLAST of EMLSAG00000000858 vs. nr
Match: gi|155966304|gb|ABU41105.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 103.99 bits (258), Expect = 4.796e-26
Identity = 51/103 (49.51%), Postives = 63/103 (61.17%), Query Frame = 0 
Query:    5 IKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVC 107
            ++ +  G  L    +  N Q+ A A P     DC CQCI+L F D  G+  GNC+ST NGAQWCYV+ D YS CPDL RS R+ G+Y+SNHAC T    SP C
Sbjct:    1 MRGIYIGIVLATCVYWSNAQQFAPA-PINSQADCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGYSSCPDLKRSTRYRGKYYSNHACITLPAYSPEC 102
[Close]
BLAST of EMLSAG00000000858 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 60.077 bits (144), Expect = 2.852e-12
Identity = 29/77 (37.66%), Postives = 44/77 (57.14%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQ-RFSG----RYWSNHACATPSEDSPVC 107
            +C CQC    +RD+ G++ GNC+S     A WCY+    ++ C D+ +S+ R       R WS  AC+TP+  SP+C
Sbjct:   47 NCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTPALTSPIC 123
[Close]
BLAST of EMLSAG00000000858 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold82_size396747-snap-gene-2.41 (protein:Tk06844 transcript:maker-scaffold82_size396747-snap-gene-2.41-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 58.5362 bits (140), Expect = 2.792e-11
Identity = 29/63 (46.03%), Postives = 34/63 (53.97%), Query Frame = 0 
Query:   38 CNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATP 100
            C+CQC +  F+     +HGNC     GA WCYVK    S C D   S R SG +WS  AC TP
Sbjct:  249 CDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGTP 310
[Close]
BLAST of EMLSAG00000000858 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 51.6026 bits (122), Expect = 3.333e-9
Identity = 37/110 (33.64%), Postives = 50/110 (45.45%), Query Frame = 0 
Query:   14 LMAFAHAQNEQKAAAAAP-------APGGN-DCNCQCISLQFRDSKGKIHGNC-KSTLNGAQWCYVKYDKYS-PCPDLG-----RSQRFSGRYWSNHACATPSEDSPVCK 108
            L A   AQ+E +             AP     CNCQC +  ++    +IHGNC  +    A+WCYV  D+YS  C D+      R    + R WS  AC+TP   S  C+
Sbjct:   13 LTALTQAQDEAEDGVDTKSVEILQKAPSNQVSCNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYV--DQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTPERASHQCR 120
[Close]
BLAST of EMLSAG00000000858 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 48.521 bits (114), Expect = 5.327e-8
Identity = 29/77 (37.66%), Postives = 40/77 (51.95%), Query Frame = 0 
Query:   38 CNCQCISLQFRDSKGKIHGNC-KSTLNGAQWCYVKYDKY-SPCPDL----GRSQRFSG-RYWSNHACATPSEDSPVC 107
            CNCQC +  ++    +IHGNC  +     +WCY+  D+Y + C D+     R   F   R WS  AC+TP   SP C
Sbjct:   47 CNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYL--DQYNNDCDDIQYSKNRRDSFGNLREWSYQACSTPQLGSPQC 121
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000858 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592953585|gb|GAXK01004968.1|1.840e-1851.28TSA: Calanus finmarchicus comp348412_c0_seq1 trans... [more]
gi|592932379|gb|GAXK01026174.1|1.404e-1650.62TSA: Calanus finmarchicus comp18158_c1_seq4 transc... [more]
gi|592932380|gb|GAXK01026173.1|7.522e-1649.38TSA: Calanus finmarchicus comp18158_c1_seq3 transc... [more]
gi|592932381|gb|GAXK01026172.1|1.346e-1544.21TSA: Calanus finmarchicus comp18158_c1_seq2 transc... [more]
gi|592932382|gb|GAXK01026171.1|1.305e-1441.05TSA: Calanus finmarchicus comp18158_c1_seq1 transc... [more]
gi|592932365|gb|GAXK01026188.1|2.648e-1455.22TSA: Calanus finmarchicus comp18158_c2_seq13 trans... [more]
gi|592932366|gb|GAXK01026187.1|3.260e-1455.22TSA: Calanus finmarchicus comp18158_c2_seq12 trans... [more]
gi|592906544|gb|GAXK01051831.1|4.485e-1453.52TSA: Calanus finmarchicus comp28981_c1_seq1 transc... [more]
gi|592772445|gb|GAXK01182123.1|7.674e-1445.45TSA: Calanus finmarchicus comp899023_c0_seq1 trans... [more]
gi|592848675|gb|GAXK01108869.1|7.875e-1452.31TSA: Calanus finmarchicus comp296545_c0_seq2 trans... [more]

Pages

back to top
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 19
Match NameE-valueIdentityDescription
EMLSAP000000008586.733e-98100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1146:1430... [more]
EMLSAP000000018346.069e-5770.37pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:3408... [more]
EMLSAP000000003112.606e-5469.12pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:2069... [more]
EMLSAP000000018377.602e-5461.94pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:7214... [more]
EMLSAP000000024061.037e-2852.63pep:novel supercontig:LSalAtl2s:LSalAtl2s145:15811... [more]
EMLSAP000000003661.643e-2647.57pep:novel supercontig:LSalAtl2s:LSalAtl2s1053:5701... [more]
EMLSAP000000059111.523e-2146.39pep:novel supercontig:LSalAtl2s:LSalAtl2s31:133690... [more]
EMLSAP000000013276.512e-2147.73pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:2197... [more]
EMLSAP000000048891.555e-1243.18pep:novel supercontig:LSalAtl2s:LSalAtl2s257:17935... [more]
EMLSAP000000123223.452e-1239.60pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290... [more]

Pages

back to top
BLAST of EMLSAG00000000858 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000858 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000858 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|155966304|gb|ABU41105.1|4.796e-2649.51hypothetical protein [Lepeophtheirus salmonis][more]
back to top
BLAST of EMLSAG00000000858 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4
Match NameE-valueIdentityDescription
maker-scaffold381_size190066-snap-gene-0.312.852e-1237.66protein:Tk01605 transcript:maker-scaffold381_size1... [more]
maker-scaffold82_size396747-snap-gene-2.412.792e-1146.03protein:Tk06844 transcript:maker-scaffold82_size39... [more]
maker-scaffold381_size190066-snap-gene-0.303.333e-933.64protein:Tk01607 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.325.327e-837.66protein:Tk01608 transcript:maker-scaffold381_size1... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1146supercontigLSalAtl2s1146:143094..143555 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1146-augustus-gene-0.4
Biotypeprotein_coding
EvidenceIEA
Notehypothetical protein [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000858 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000858EMLSAT00000000858-696705Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1146:143094..143555-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000858-683624 ID=EMLSAG00000000858-683624|Name=EMLSAG00000000858|organism=Lepeophtheirus salmonis|type=gene|length=462bp|location=Sequence derived from alignment at LSalAtl2s1146:143094..143555- (Lepeophtheirus salmonis)
ATGAGTCTTGGAATAAAGTTTCTTCTCTTTGGTGCATTCCTTATGGCATT
TGCCCATGCACAAAATGAACAAAAAGCTGCTGCTGCGGCTCCKGCCCCTG
GAGGAAATGATTGTAATTGCCAATGTATCTCCCTACAGTTCCGGGATTCC
AAAGGGAAAATACATGGAAACTGCAAGAGGTAAGCTAGTTACTAAATAGA
GATCTTTATCATTTTTTAACAATCTTCACTTTACAGCACATTGAATGGAG
CTCAGTGGTGCTATGTCAAATATGATAAATATAGTCCCTGTCCTGATCTT
GGACGTTCCCAACGTTTCAGTGGACGCTATTGGTCCAATCATGCATGTGC
TACTCCATCTGAGGATTCCCCTGTCTGCAAATATGTTTTCCCACCATTTG
TTCGAGAAACAGCATTTGCCTCTTCTGCATCTTCTAAGAATGTTGCTGAC
GGCGTTGTTTAA
back to top
Add to Basket