EMLSAG00000000886, EMLSAG00000000886-683652 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000886
Unique NameEMLSAG00000000886-683652
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000000886 vs. C. finmarchicus
Match: gi|592798899|gb|GAXK01155669.1| (TSA: Calanus finmarchicus comp104655_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 57.7658 bits (138), Expect = 3.928e-9
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   12 NQRRYPSVLLRPPSHTSGSETDVSTSNENLSTEERFLLRSSERQDPQGEE 61
            N + YPS+        SGSETDVSTS ENL+ EER++LR+ ERQ+PQGEE
Sbjct: 3853 NLKYYPSL--------SGSETDVSTSTENLTQEERYVLRNMERQEPQGEE 3978          

HSP 2 Score: 49.6766 bits (117), Expect = 2.007e-6
Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 0
Query:   79 KLNPSVYAH---KDPLLFN-KLLIRKPNMNM------TTSSGAYFDPKGVSNKENSSGHSDYTSSDIISQLTREMRLYSQAALSG 153
            +L PSVY+H   +DP+L + K   + P + M       +SSGAYFD   +S K+ S      T +DII+QLTREM++     LSG
Sbjct: 3265 RLAPSVYSHPNVQDPILKSPKSFYQDPQVIMPKRGFNISSSGAYFDTSAISAKQTSDLQ---TQNDIIAQLTREMKM--NGGLSG 3504          
BLAST of EMLSAG00000000886 vs. L. salmonis peptides
Match: EMLSAP00000000886 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1153:32248:32826:1 gene:EMLSAG00000000886 transcript:EMLSAT00000000886 description:"snap_masked-LSalAtl2s1153-processed-gene-0.28")

HSP 1 Score: 388.652 bits (997), Expect = 1.040e-138
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
Query:    1 MKSSEPNRGLVNQRRYPSVLLRPPSHTSGSETDVSTSNENLSTEERFLLRSSERQDPQGEEETGRFVTHHHLSSPHPDKLNPSVYAHKDPLLFNKLLIRKPNMNMTTSSGAYFDPKGVSNKENSSGHSDYTSSDIISQLTREMRLYSQAALSGLPVPPKMEPLAKKQLGPDKQLLILSRSQPDLQYDPPNDD 192
            MKSSEPNRGLVNQRRYPSVLLRPPSHTSGSETDVSTSNENLSTEERFLLRSSERQDPQGEEETGRFVTHHHLSSPHPDKLNPSVYAHKDPLLFNKLLIRKPNMNMTTSSGAYFDPKGVSNKENSSGHSDYTSSDIISQLTREMRLYSQAALSGLPVPPKMEPLAKKQLGPDKQLLILSRSQPDLQYDPPNDD
Sbjct:    1 MKSSEPNRGLVNQRRYPSVLLRPPSHTSGSETDVSTSNENLSTEERFLLRSSERQDPQGEEETGRFVTHHHLSSPHPDKLNPSVYAHKDPLLFNKLLIRKPNMNMTTSSGAYFDPKGVSNKENSSGHSDYTSSDIISQLTREMRLYSQAALSGLPVPPKMEPLAKKQLGPDKQLLILSRSQPDLQYDPPNDD 192          
BLAST of EMLSAG00000000886 vs. Select Arthropod Genomes
Match: gb|EEC02734.1| (angiomotin, putative [Ixodes scapularis])

HSP 1 Score: 58.9214 bits (141), Expect = 1.247e-9
Identity = 28/33 (84.85%), Postives = 28/33 (84.85%), Query Frame = 0
Query:   27 TSGSETDVSTSNENLSTEERFLLRSSERQDPQG 59
             SGSETDVSTSNENLSTEER  LR  ERQDPQG
Sbjct:   29 CSGSETDVSTSNENLSTEERLALRRGERQDPQG 61          
BLAST of EMLSAG00000000886 vs. Select Arthropod Genomes
Match: XP_016770712.1 (PREDICTED: angiomotin-like protein 1 isoform X1 [Apis mellifera])

HSP 1 Score: 55.0694 bits (131), Expect = 2.804e-8
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   13 QRRYPSVLLRPPSHTSGSETDVSTSNENLSTEERFLLRSSERQDPQGEE 61
            QR+  S+    P   SGSETDVSTSNENL+ E+R+++R + RQ+PQG+E
Sbjct:   19 QRKQLSMQGGLPQSLSGSETDVSTSNENLTNEDRYVIRHTARQEPQGQE 67          
BLAST of EMLSAG00000000886 vs. Select Arthropod Genomes
Match: XP_016770711.1 (PREDICTED: angiomotin-like protein 1 isoform X1 [Apis mellifera])

HSP 1 Score: 55.0694 bits (131), Expect = 2.804e-8
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   13 QRRYPSVLLRPPSHTSGSETDVSTSNENLSTEERFLLRSSERQDPQGEE 61
            QR+  S+    P   SGSETDVSTSNENL+ E+R+++R + RQ+PQG+E
Sbjct:   19 QRKQLSMQGGLPQSLSGSETDVSTSNENLTNEDRYVIRHTARQEPQGQE 67          
BLAST of EMLSAG00000000886 vs. Select Arthropod Genomes
Match: XP_016770713.1 (PREDICTED: angiomotin-like protein 1 isoform X2 [Apis mellifera])

HSP 1 Score: 55.0694 bits (131), Expect = 2.884e-8
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   13 QRRYPSVLLRPPSHTSGSETDVSTSNENLSTEERFLLRSSERQDPQGEE 61
            QR+  S+    P   SGSETDVSTSNENL+ E+R+++R + RQ+PQG+E
Sbjct:   19 QRKQLSMQGGLPQSLSGSETDVSTSNENLTNEDRYVIRHTARQEPQGQE 67          
BLAST of EMLSAG00000000886 vs. Select Arthropod Genomes
Match: gb|KYB25057.1| (hypothetical protein TcasGA2_TC011305 [Tribolium castaneum])

HSP 1 Score: 54.6842 bits (130), Expect = 3.551e-8
Identity = 24/38 (63.16%), Postives = 32/38 (84.21%), Query Frame = 0
Query:   24 PSHTSGSETDVSTSNENLSTEERFLLRSSERQDPQGEE 61
            P   SGSETD+STSNENLS EE++++R + RQ+PQG+E
Sbjct:   22 PQSLSGSETDISTSNENLSNEEKYVIRHTARQEPQGQE 59          
BLAST of EMLSAG00000000886 vs. Select Arthropod Genomes
Match: gb|EEZ97473.2| (hypothetical protein TcasGA2_TC011305 [Tribolium castaneum])

HSP 1 Score: 54.6842 bits (130), Expect = 3.627e-8
Identity = 24/38 (63.16%), Postives = 32/38 (84.21%), Query Frame = 0
Query:   24 PSHTSGSETDVSTSNENLSTEERFLLRSSERQDPQGEE 61
            P   SGSETD+STSNENLS EE++++R + RQ+PQG+E
Sbjct:   22 PQSLSGSETDISTSNENLSNEEKYVIRHTARQEPQGQE 59          
BLAST of EMLSAG00000000886 vs. Select Arthropod Genomes
Match: EEB16166.1 (angiomotin, putative [Pediculus humanus corporis])

HSP 1 Score: 54.299 bits (129), Expect = 4.751e-8
Identity = 25/34 (73.53%), Postives = 31/34 (91.18%), Query Frame = 0
Query:   28 SGSETDVSTSNENLSTEERFLLRSSERQDPQGEE 61
            SGSETDVSTSNENLS EER+++R + RQ+PQG+E
Sbjct:   42 SGSETDVSTSNENLSHEERYVIRHTARQEPQGQE 75          
BLAST of EMLSAG00000000886 vs. nr
Match: gi|1058040645|gb|JAS23984.1| (hypothetical protein g.32540 [Clastoptera arizonana])

HSP 1 Score: 59.6918 bits (143), Expect = 3.738e-7
Identity = 59/189 (31.22%), Postives = 95/189 (50.26%), Query Frame = 0
Query:   28 SGSETDVSTSNENLSTEERFLLRSSERQDPQGEEETGRFVTHHHLSSPHPDKLNPSVYAHKDPLLFNKLLIRKPNMNMTTSSGAYFDPKGVSN----------KENSSGHSDYTS-SDIISQLTREMRL--------YSQAALSGLPVP------PKMEPLAKKQLGPDKQLLILSRSQPDL-QYDPPN 190
            SGSETD+STSNENLS EER+++R +ERQ+PQG+E      + +       + L   ++ H D +  N+L   + ++   T  GA    K  S           +E +    DY S S ++  L +E+++         +++ L  LP P      P  +P++K      K+ + LS+SQPDL +  PP+
Sbjct:   29 SGSETDISTSNENLSHEERYVIRHTERQEPQGQENRSLQESRNVQDCSSYNTL--IIHGHGDEMWTNRLSSDQSSVQYKT--GAPMACKDSSQSMRHVYTPSVREITDIPDDYLSQSQVLKHLAKEVKVVPLDNDCDVNESTLRRLPPPQYPCWSPPPQPMSKAASIKTKR-VALSKSQPDLSRLSPPD 212          
BLAST of EMLSAG00000000886 vs. nr
Match: gi|1058012636|gb|JAS10002.1| (hypothetical protein g.32542 [Clastoptera arizonana])

HSP 1 Score: 59.3066 bits (142), Expect = 4.228e-7
Identity = 59/193 (30.57%), Postives = 95/193 (49.22%), Query Frame = 0
Query:   28 SGSETDVSTSNENLSTEERFLLRSSERQDPQGEEETGRFVTHHHLSSPHPDKLNPSVYAHKDPLLFNKLLIRKPNMNMTTSSGAYFDPKGVSNKENSSGH-------------SDYTS-SDIISQLTREMRL--------YSQAALSGLPVPPKM-------EPLAKKQLGPDKQLLILSRSQPDL-QYDPPN 190
            SGSETD+STSNENLS EER+++R +ERQ+PQG+E      + +       + L   ++ H D +  N+L   + ++   T  GA   P    +   S  H              DY S S ++  L +E+++         +++ L  LP PP+        +P++K      K+ + LS+SQPDL +  PP+
Sbjct:   29 SGSETDISTSNENLSHEERYVIRHTERQEPQGQENRSLQESRNVQDCSSYNTL--IIHGHGDEMWTNRLSSDQSSVQYKT--GA---PMACKDSSQSMRHVYTPSVREITDIPDDYLSQSQVLKHLAKEVKVVPLDNDCDVNESTLRRLP-PPQYPCWSPPPQPMSKAASIKTKR-VALSKSQPDLSRLSPPD 212          
BLAST of EMLSAG00000000886 vs. nr
Match: gi|1058023494|gb|JAS15409.1| (hypothetical protein g.32543 [Clastoptera arizonana])

HSP 1 Score: 58.9214 bits (141), Expect = 5.786e-7
Identity = 59/193 (30.57%), Postives = 95/193 (49.22%), Query Frame = 0
Query:   28 SGSETDVSTSNENLSTEERFLLRSSERQDPQGEEETGRFVTHHHLSSPHPDKLNPSVYAHKDPLLFNKLLIRKPNMNMTTSSGAYFDPKGVSNKENSSGH-------------SDYTS-SDIISQLTREMRL--------YSQAALSGLPVPPKM-------EPLAKKQLGPDKQLLILSRSQPDL-QYDPPN 190
            SGSETD+STSNENLS EER+++R +ERQ+PQG+E      + +       + L   ++ H D +  N+L   + ++   T  GA   P    +   S  H              DY S S ++  L +E+++         +++ L  LP PP+        +P++K      K+ + LS+SQPDL +  PP+
Sbjct:   29 SGSETDISTSNENLSHEERYVIRHTERQEPQGQENRSLQESRNVQDCSSYNTL--IIHGHGDEMWTNRLSSDQSSVQYKT--GA---PMACKDSSQSMRHVYTPSVREITDIPDDYLSQSQVLKHLAKEVKVVPLDNDCDVNESTLRRLP-PPQYPCWSPPPQPMSKAASIKTKR-VALSKSQPDLSRLSPPD 212          
BLAST of EMLSAG00000000886 vs. nr
Match: gi|241114907|ref|XP_002400496.1| (angiomotin, putative [Ixodes scapularis] >gi|215493093|gb|EEC02734.1| angiomotin, putative [Ixodes scapularis])

HSP 1 Score: 58.9214 bits (141), Expect = 6.103e-7
Identity = 28/33 (84.85%), Postives = 28/33 (84.85%), Query Frame = 0
Query:   27 TSGSETDVSTSNENLSTEERFLLRSSERQDPQG 59
             SGSETDVSTSNENLSTEER  LR  ERQDPQG
Sbjct:   29 CSGSETDVSTSNENLSTEERLALRRGERQDPQG 61          
BLAST of EMLSAG00000000886 vs. nr
Match: gi|815808497|ref|XP_012225084.1| (PREDICTED: uncharacterized protein LOC105673785 [Linepithema humile])

HSP 1 Score: 58.5362 bits (140), Expect = 8.726e-7
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 0
Query:   13 QRRYPSVLLRPPSHTSGSETDVSTSNENLSTEERFLLRSSERQDPQGEE 61
            QR+  S+    P   SGS+TDVSTSNENLS EER+++R +ERQ+PQG+E
Sbjct:   19 QRKQLSMQGGLPQSLSGSDTDVSTSNENLSNEERYVIRHTERQEPQGQE 67          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000886 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000886 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 1
Match NameE-valueIdentityDescription
gi|592798899|gb|GAXK01155669.1|3.928e-960.00TSA: Calanus finmarchicus comp104655_c0_seq1 trans... [more]
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BLAST of EMLSAG00000000886 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000008861.040e-138100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1153:3224... [more]
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BLAST of EMLSAG00000000886 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000886 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 7
Match NameE-valueIdentityDescription
gb|EEC02734.1|1.247e-984.85angiomotin, putative [Ixodes scapularis][more]
XP_016770712.12.804e-855.10PREDICTED: angiomotin-like protein 1 isoform X1 [A... [more]
XP_016770711.12.804e-855.10PREDICTED: angiomotin-like protein 1 isoform X1 [A... [more]
XP_016770713.12.884e-855.10PREDICTED: angiomotin-like protein 1 isoform X2 [A... [more]
gb|KYB25057.1|3.551e-863.16hypothetical protein TcasGA2_TC011305 [Tribolium c... [more]
gb|EEZ97473.2|3.627e-863.16hypothetical protein TcasGA2_TC011305 [Tribolium c... [more]
EEB16166.14.751e-873.53angiomotin, putative [Pediculus humanus corporis][more]
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BLAST of EMLSAG00000000886 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 5
Match NameE-valueIdentityDescription
gi|1058040645|gb|JAS23984.1|3.738e-731.22hypothetical protein g.32540 [Clastoptera arizonan... [more]
gi|1058012636|gb|JAS10002.1|4.228e-730.57hypothetical protein g.32542 [Clastoptera arizonan... [more]
gi|1058023494|gb|JAS15409.1|5.786e-730.57hypothetical protein g.32543 [Clastoptera arizonan... [more]
gi|241114907|ref|XP_002400496.1|6.103e-784.85angiomotin, putative [Ixodes scapularis] >gi|21549... [more]
gi|815808497|ref|XP_012225084.1|8.726e-759.18PREDICTED: uncharacterized protein LOC105673785 [L... [more]
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BLAST of EMLSAG00000000886 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1153supercontigLSalAtl2s1153:32248..32826 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s1153-processed-gene-0.28
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000886 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000886EMLSAT00000000886-696733Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1153:32248..32826+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000886-683652 ID=EMLSAG00000000886-683652|Name=EMLSAG00000000886|organism=Lepeophtheirus salmonis|type=gene|length=579bp|location=Sequence derived from alignment at LSalAtl2s1153:32248..32826+ (Lepeophtheirus salmonis)
ATGAAATCCTCGGAGCCCAATCGGGGCTTAGTGAATCAGCGACGTTACCC TAGTGTTTTACTCCGGCCCCCTTCTCATACTAGTGGAAGTGAAACGGATG TTTCGACCTCGAACGAAAACCTAAGTACAGAAGAGAGATTCCTTCTTCGG AGCAGTGAACGGCAAGATCCTCAAGGAGAAGAAGAAACGGGTCGTTTTGT GACCCATCACCACCTCTCTTCTCCTCACCCAGACAAATTGAACCCCTCTG TCTACGCTCACAAGGACCCACTCCTCTTCAACAAACTCCTCATTCGMAAG CCAAACATGAACATGACCACCTCTTCCGGGGCCTATTTTGATCCCAAGGG GGTGTCCAATAAAGAGAACTCCTCTGGACATAGTGATTACACCTCTTCAG ACATTATTTCCCAGCTTACTCGGGAAATGAGACTTTATTCACAAGCAGCT TTGTCAGGTCTTCCCGTTCCTCCAAAAATGGAGCCACTCGCTAAGAAGCA ACTAGGTCCTGATAAGCAGCTCCTTATCTTATCACGCTCTCAACCAGATC TGCAGTACGACCCACCAAATGATGACTAG
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