EMLSAG00000000927, EMLSAG00000000927-683693 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA4 "Transcription activator BRG1" species:9913 "Bos taurus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development" evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003407 "neural retina development" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714 "transcription corepressor activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate determination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0030198 "extracellular matrix organization" evidence=IEA] [GO:0030216 "keratinocyte differentiation" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA] [GO:0043923 "positive regulation by host of viral transcription" evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding" evidence=IEA] [GO:0071564 "npBAF complex" evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071778 "WINAC complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0030308 GO:GO:0006200 GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122 GO:GO:0051091 GO:GO:0006366 GO:GO:0001570 GO:GO:0071564 GO:GO:0016514 GO:GO:0003407 GO:GO:0071565 GO:GO:0000902 GO:GO:0000977 GO:GO:0004386 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902 GO:GO:0001105 GO:GO:0048730 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0000792 GO:GO:0060347 GO:GO:0071778 GO:GO:0043966 GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0008094 GO:GO:0001835 GO:GO:0007403 GO:GO:0060766 GO:GO:0006346 GO:GO:0010424 GO:GO:0043923 GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887 EMBL:BC153216 RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019 SMR:A7Z019 STRING:9913.ENSBTAP00000025598 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274 CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019 Uniprot:A7Z019) HSP 1 Score: 55.4546 bits (132), Expect = 1.702e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 435 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 491
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA4 "Transcription activator BRG1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0008152 GO:GO:0003677 GO:GO:0004386 EMBL:CH471106 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 KO:K11647 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636 TreeFam:TF300785 CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597 KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4 GenomeRNAi:6597 NextBio:25661 OMA:RGMKYLR RefSeq:NP_001122321.1 ProteinModelPortal:Q9HBD4 SMR:Q9HBD4 IntAct:Q9HBD4 MINT:MINT-2818417 PRIDE:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3 PhylomeDB:Q9HBD4 ArrayExpress:Q9HBD4 Uniprot:Q9HBD4) HSP 1 Score: 55.0694 bits (131), Expect = 1.897e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 499
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA4 "Transcription activator BRG1" species:9606 "Homo sapiens" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=TAS] [GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IDA] [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development" evidence=IEA] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003407 "neural retina development" evidence=IEP] [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003713 "transcription coactivator activity" evidence=NAS;IMP] [GO:0003714 "transcription corepressor activity" evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005615 "extracellular space" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IGI] [GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC;IDA] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA] [GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=NAS] [GO:0007070 "negative regulation of transcription from RNA polymerase II promoter during mitosis" evidence=TAS] [GO:0007403 "glial cell fate determination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=IGI] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0030198 "extracellular matrix organization" evidence=IEA] [GO:0030216 "keratinocyte differentiation" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IMP] [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IPI] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA] [GO:0043923 "positive regulation by host of viral transcription" evidence=IMP] [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IMP;IDA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IMP] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IPI] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IDA] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IMP] [GO:0070577 "histone acetyl-lysine binding" evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071778 "WINAC complex" evidence=IDA] [GO:2000134 "negative regulation of G1/S transition of mitotic cell cycle" evidence=TAS] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0005615 GO:GO:0030308 GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000790 GO:GO:0051091 GO:GO:0001570 GO:GO:0071564 GO:GO:0016514 GO:GO:0003407 GO:GO:0071565 GO:GO:0000902 GO:GO:0000977 GO:GO:0004386 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902 EMBL:CH471106 GO:GO:0001105 GO:GO:2000134 GO:GO:0048730 Orphanet:1465 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0070577 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0000792 GO:GO:0060347 GO:GO:0071778 GO:GO:0043966 GO:GO:0043388 KO:K11647 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0001835 GO:GO:0007403 GO:GO:0007070 GO:GO:0060766 GO:GO:0006346 GO:GO:0010424 GO:GO:0043923 GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485 GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887 CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756 EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127 PIR:S45252 RefSeq:NP_001122316.1 RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1 RefSeq:NP_001122320.1 RefSeq:NP_003063.2 RefSeq:XP_005260089.1 RefSeq:XP_005260090.1 RefSeq:XP_005260091.1 RefSeq:XP_005260092.1 UniGene:Hs.327527 PDB:2GRC PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD ProteinModelPortal:P51532 SMR:P51532 BioGrid:112481 DIP:DIP-24249N IntAct:P51532 MINT:MINT-204078 STRING:9606.ENSP00000350720 PhosphoSite:P51532 DMDM:116242792 PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626 Ensembl:ENST00000413806 Ensembl:ENST00000429416 Ensembl:ENST00000444061 Ensembl:ENST00000450717 Ensembl:ENST00000541122 Ensembl:ENST00000589677 Ensembl:ENST00000590574 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4 UCSC:uc002mqj.4 UCSC:uc010dxq.3 UCSC:uc010dxr.3 UCSC:uc010dxs.3 GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 HPA:HPA048340 MIM:603254 MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108 PharmGKB:PA35950 SignaLink:P51532 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532 GeneWiki:SMARCA4 GenomeRNAi:6597 NextBio:25661 PRO:PR:P51532 ArrayExpress:P51532 Bgee:P51532 CleanEx:HS_SMARCA4 Genevestigator:P51532 Uniprot:P51532) HSP 1 Score: 55.0694 bits (131), Expect = 1.910e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 499
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:Smarca2 "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006325 "chromatin organization" evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO] [GO:0007399 "nervous system development" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=ISO] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IMP] [GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO] [GO:0044212 "transcription regulatory region DNA binding" evidence=ISO] [GO:0045111 "intermediate filament cytoskeleton" evidence=ISO] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISO] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex" evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:99603 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0006366 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0006334 GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0071778 KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887 EMBL:BC075641 RefSeq:NP_035546.2 UniGene:Mm.491146 ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 BioGrid:211982 DIP:DIP-48888N PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155 KEGG:mmu:67155 UCSC:uc012bjw.1 InParanoid:Q6DIC0 NextBio:323746 PRO:PR:Q6DIC0 ArrayExpress:Q6DIC0 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0) HSP 1 Score: 54.299 bits (129), Expect = 3.428e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 424 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 480
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA2 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0044212 "transcription regulatory region DNA binding" evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0006366 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0071778 KO:K11647 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 OMA:INYKDRC TreeFam:TF300785 GO:GO:0035887 EMBL:DAAA02022747 EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 RefSeq:NP_001092585.1 RefSeq:XP_005210045.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:9913.ENSBTAP00000035551 Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904 InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5) HSP 1 Score: 54.299 bits (129), Expect = 3.452e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 401 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 457
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0044212 "transcription regulatory region DNA binding" evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0006366 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0071778 KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595 OMA:INYKDRC TreeFam:TF300785 GO:GO:0035887 EMBL:AAEX03000600 GeneID:476335 RefSeq:XP_005615959.1 RefSeq:XP_005615960.1 RefSeq:XP_005615961.1 RefSeq:XP_850159.1 Ensembl:ENSCAFT00000046362 KEGG:cfa:476335 Uniprot:J9P5P2) HSP 1 Score: 54.299 bits (129), Expect = 3.459e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 403 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 459
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:smarca2 "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0008152 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 KO:K11647 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595 HOVERGEN:HBG056636 EMBL:BC060676 RefSeq:NP_997881.1 UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237 Uniprot:Q6P9P2) HSP 1 Score: 54.299 bits (129), Expect = 3.489e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 422 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKIQK 478
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0044212 "transcription regulatory region DNA binding" evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:1302988 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0006366 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0071778 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 OMA:INYKDRC TreeFam:TF300785 GO:GO:0035887 EMBL:AABR06010414 Ensembl:ENSRNOT00000016740 NextBio:35575046 PRO:PR:E9PTG1 ArrayExpress:E9PTG1 Uniprot:E9PTG1) HSP 1 Score: 54.299 bits (129), Expect = 3.499e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 426 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 482
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:Smarca2 "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2" species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA;ISO] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA;ISO] [GO:0016514 "SWI/SNF complex" evidence=IEA;ISO] [GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO] [GO:0044212 "transcription regulatory region DNA binding" evidence=IEA;ISO] [GO:0045111 "intermediate filament cytoskeleton" evidence=IEA;ISO] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex" evidence=IEA;ISO] [GO:0071565 "nBAF complex" evidence=IEA;ISO] [GO:0071778 "WINAC complex" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:1302988 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0006366 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0071778 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 OMA:INYKDRC TreeFam:TF300785 GO:GO:0035887 EMBL:AABR06010414 Ensembl:ENSRNOT00000016740 NextBio:35575046 PRO:PR:E9PTG1 ArrayExpress:E9PTG1 Uniprot:E9PTG1) HSP 1 Score: 54.299 bits (129), Expect = 3.499e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 426 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 482
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0008152 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 KO:K11647 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AAEX03000600 RefSeq:XP_005615962.1 Ensembl:ENSCAFT00000003206 GeneID:476335 NextBio:20852013 Uniprot:E2RKP4) HSP 1 Score: 54.299 bits (129), Expect = 3.582e-8 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 403 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 459
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890136|gb|GAXK01068239.1| (TSA: Calanus finmarchicus comp17614_c0_seq2 transcribed RNA sequence) HSP 1 Score: 50.8322 bits (120), Expect = 1.923e-7 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
Query: 24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
+E+LEKQ RVE+ERK R +H E++ + +H R+ Q +HKNN K+ K
Sbjct: 1468 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 1608
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890137|gb|GAXK01068238.1| (TSA: Calanus finmarchicus comp17614_c0_seq1 transcribed RNA sequence) HSP 1 Score: 50.8322 bits (120), Expect = 1.991e-7 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
Query: 24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
+E+LEKQ RVE+ERK R +H E++ + +H R+ Q +HKNN K+ K
Sbjct: 1468 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 1608
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890132|gb|GAXK01068243.1| (TSA: Calanus finmarchicus comp17614_c1_seq1 transcribed RNA sequence) HSP 1 Score: 50.447 bits (119), Expect = 2.070e-7 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
Query: 24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
+E+LEKQ RVE+ERK R +H E++ + +H R+ Q +HKNN K+ K
Sbjct: 3290 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 3430
BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Match: EMLSAP00000000927 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1161:15715:16165:-1 gene:EMLSAG00000000927 transcript:EMLSAT00000000927 description:"maker-LSalAtl2s1161-snap-gene-0.17") HSP 1 Score: 193.741 bits (491), Expect = 4.527e-65 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
Query: 1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW 93
MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW
Sbjct: 1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW 93
BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Match: EMLSAP00000009416 (pep:novel supercontig:LSalAtl2s:LSalAtl2s600:248324:253025:1 gene:EMLSAG00000009416 transcript:EMLSAT00000009416 description:"maker-LSalAtl2s600-snap-gene-2.21") HSP 1 Score: 85.8853 bits (211), Expect = 1.394e-20 Identity = 43/58 (74.14%), Postives = 47/58 (81.03%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKT 71
K+QG EA +EKLEKQ R EAERK RQRHQE+L I SH RDFQ+FHKNNQMKLLKT
Sbjct: 137 KRQGLREARATEKLEKQQRXEAERKRRQRHQEYLNAILSHARDFQNFHKNNQMKLLKT 194
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|19857556|sp|P25439.2|BRM_DROME (RecName: Full=ATP-dependent helicase brm; AltName: Full=Homeotic gene regulator; AltName: Full=Protein brahma) HSP 1 Score: 60.077 bits (144), Expect = 5.664e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L
Sbjct: 484 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 538
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|123790047|sp|Q3TKT4.1|SMCA4_MOUSE (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.8398 bits (133), Expect = 1.701e-9 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ KL K
Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|81914599|sp|Q8K1P7.1|SMCA4_RAT (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.8398 bits (133), Expect = 1.822e-9 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ KL K
Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|288559138|sp|A7Z019.1|SMCA4_BOVIN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.4546 bits (132), Expect = 2.825e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 435 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 491
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|116242792|sp|P51532.2|SMCA4_HUMAN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Mitotic growth and transcription activator; AltName: Full=Protein BRG-1; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 55.0694 bits (131), Expect = 3.178e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 499
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|81884744|sp|Q6DIC0.1|SMCA2_MOUSE (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2) HSP 1 Score: 54.299 bits (129), Expect = 5.925e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 424 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 480
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|212276472|sp|P51531.2|SMCA2_HUMAN (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; Short=hBRM; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2) HSP 1 Score: 54.299 bits (129), Expect = 6.534e-9 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+Q EA +EKLEKQ ++E ERK RQ+HQE+L +I H +DF+ +H++ K+ K
Sbjct: 419 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 475
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|EEZ97706.2| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 2.056e-14 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL
Sbjct: 264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|KYB25021.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 2.056e-14 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL
Sbjct: 264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|KYB25022.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 2.264e-14 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL
Sbjct: 217 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 271
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|KYB25018.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 2.635e-14 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL
Sbjct: 487 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 541
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: XP_016773027.1 (PREDICTED: ATP-dependent helicase brm [Apis mellifera]) HSP 1 Score: 66.2402 bits (160), Expect = 1.878e-13 Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NN KL
Sbjct: 914 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKL 968
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: EAA07201.4 (AGAP010462-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 64.6994 bits (156), Expect = 6.621e-13 Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ +H+NN KL
Sbjct: 492 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLASVLQHGKDFKEYHRNNIAKL 546
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: EFX72834.1 (hypothetical protein DAPPUDRAFT_215757 [Daphnia pulex]) HSP 1 Score: 62.7734 bits (151), Expect = 3.032e-12 Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKT 71
KKQG EA +EKLEKQ ++EAER+ RQ+HQE+L + H +D + FH+NN K+++
Sbjct: 440 KKQGLREARATEKLEKQQKMEAERRRRQKHQEYLTAVLQHGKDLKEFHRNNLAKIVRI 497
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: EEB11322.1 (conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 61.2326 bits (147), Expect = 1.053e-11 Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMK 67
K+QG EA +EKLEKQ + EAERK RQ+HQE+L + H +DF+ +H+NN K
Sbjct: 365 KRQGLREARATEKLEKQQKFEAERKRRQKHQEYLAAVLQHSKDFKEYHRNNLAK 418
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: AAN11774.1 (brahma, isoform D [Drosophila melanogaster]) HSP 1 Score: 60.077 bits (144), Expect = 2.666e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L
Sbjct: 480 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 534
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: AAN11773.1 (brahma, isoform C [Drosophila melanogaster]) HSP 1 Score: 60.077 bits (144), Expect = 2.666e-11 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+H EFL + H +D + FH+NN+ +L
Sbjct: 480 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 534
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1073535903|gb|JAT85063.1| (hypothetical protein g.8451, partial [Pectinophora gossypiella]) HSP 1 Score: 70.4774 bits (171), Expect = 1.307e-12 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL T+ H +DF+ FH+NN KL
Sbjct: 101 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEFHRNNVSKL 155
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1133425729|ref|XP_019868655.1| (PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase brm-like [Aethina tumida]) HSP 1 Score: 69.3218 bits (168), Expect = 7.757e-12 Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL++
Sbjct: 391 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKDFHRNNQAKLVR 447
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395637|gb|EEZ97706.2| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.006e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL
Sbjct: 264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395636|gb|KYB25021.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.006e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL
Sbjct: 264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395638|gb|KYB25022.1| (brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.108e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL
Sbjct: 217 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 271
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937367|ref|XP_008198808.1| (PREDICTED: ATP-dependent helicase brm isoform X2 [Tribolium castaneum] >gi|1004395633|gb|KYB25018.1| brahma [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.289e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL
Sbjct: 487 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 541
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937363|ref|XP_008198806.1| (PREDICTED: ATP-dependent helicase brm isoform X1 [Tribolium castaneum] >gi|642937365|ref|XP_008198807.1| PREDICTED: ATP-dependent helicase brm isoform X1 [Tribolium castaneum]) HSP 1 Score: 68.9366 bits (167), Expect = 1.289e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL
Sbjct: 487 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 541
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937369|ref|XP_008198809.1| (PREDICTED: ATP-dependent helicase brm isoform X3 [Tribolium castaneum]) HSP 1 Score: 68.5514 bits (166), Expect = 1.393e-11 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL ++ H +DF+ FH+NNQ KL
Sbjct: 440 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 494
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1041531429|ref|XP_017301764.1| (PREDICTED: ATP-dependent helicase brm [Diaphorina citri]) HSP 1 Score: 68.5514 bits (166), Expect = 1.514e-11 Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+QG EA +EKLEKQ +VEAERK RQ+HQE++ T+ H +DF+ +H+NNQ ++++
Sbjct: 280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMR 336
BLAST of EMLSAG00000000927 vs. nr
Match: gi|930665571|gb|KPJ06699.1| (ATP-dependent helicase brm [Papilio machaon]) HSP 1 Score: 67.781 bits (164), Expect = 2.896e-11 Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
K+QG EA +EKLEKQ ++EAERK RQ+HQEFL T+ H +DF+ +H+NN KL
Sbjct: 523 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEYHRNNVAKL 577
BLAST of EMLSAG00000000927 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold495_size155559-snap-gene-0.32 (protein:Tk09239 transcript:maker-scaffold495_size155559-snap-gene-0.32-mRNA-1 annotation:"homeotic gene") HSP 1 Score: 66.2402 bits (160), Expect = 1.592e-14 Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
Query: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
K+QG EA +EKLEKQ R+EAER+ RQ+HQE+L + +H RD Q+FH+NN K+ K
Sbjct: 323 KRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQK 379 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000927 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 24
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BLAST of EMLSAG00000000927 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000927 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 7
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 17
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BLAST of EMLSAG00000000927 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000927 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1161:15715..16165- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000927-683693 ID=EMLSAG00000000927-683693|Name=EMLSAG00000000927|organism=Lepeophtheirus salmonis|type=gene|length=451bp|location=Sequence derived from alignment at LSalAtl2s1161:15715..16165- (Lepeophtheirus salmonis)back to top Add to Basket
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