EMLSAG00000000927, EMLSAG00000000927-683693 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000927
Unique NameEMLSAG00000000927-683693
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:R4GKI2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development" evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003407 "neural retina development" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714 "transcription corepressor activity" evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate determination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0030198 "extracellular matrix organization" evidence=IEA] [GO:0030216 "keratinocyte differentiation" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA] [GO:0043923 "positive regulation by host of viral transcription" evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 Ensembl:ENSGALT00000044462 Uniprot:R4GKI2)

HSP 1 Score: 57.7658 bits (138), Expect = 1.729e-10
Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKN 63
            +  A    +    K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++
Sbjct:    7 LETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRS 69          
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:brm "brahma" species:7227 "Drosophila melanogaster" [GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity" evidence=NAS] [GO:0003713 "transcription coactivator activity" evidence=ISS;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096 "chromatin-mediated maintenance of transcription" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS] [GO:2000134 "negative regulation of G1/S transition of mitotic cell cycle" evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007474 "imaginal disc-derived wing vein specification" evidence=IMP] [GO:0048666 "neuron development" evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP] [GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI] [GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of epidermal growth factor receptor signaling pathway" evidence=IMP] [GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27 acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0045893 EMBL:AE014296 GO:GO:0006909 GO:GO:0003677 GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351 GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386 GO:GO:0045742 GO:GO:0007480 GO:GO:2000134 GO:GO:0043044 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0035060 GO:GO:0008587 KO:K11647 EMBL:M85049 EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4 RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1 UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 BioGrid:65055 DIP:DIP-36728N IntAct:P25439 MINT:MINT-6541230 STRING:7227.FBpp0075280 PaxDb:P25439 PRIDE:P25439 EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744 KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212 GeneTree:ENSGT00550000074659 InParanoid:P25439 OrthoDB:EOG771265 PhylomeDB:P25439 SignaLink:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744 NextBio:815155 Bgee:P25439 GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 Uniprot:P25439)

HSP 1 Score: 60.077 bits (144), Expect = 4.086e-10
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+H EFL  +  H +D + FH+NN+ +L
Sbjct:  484 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 538          
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA2 "Probable global transcription activator SNF2L2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton" evidence=IDA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR014978 Pfam:PF08880 PROSITE:PS51666 SMART:SM00951 GO:GO:0005524 GO:GO:0005634 GO:GO:0008285 GO:GO:0006355 GO:GO:0008152 GO:GO:0045111 GO:GO:0071564 GO:GO:0071565 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0016818 EMBL:AL359076 EMBL:AL138755 HGNC:HGNC:11098 GO:GO:0035887 ProteinModelPortal:F6VDE0 Ensembl:ENST00000450198 OrthoDB:EOG7NPFVD NextBio:35510421 ArrayExpress:F6VDE0 Bgee:F6VDE0 Uniprot:F6VDE0)

HSP 1 Score: 55.8398 bits (133), Expect = 9.379e-9
Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   K+ K
Sbjct:  419 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 475          
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:Smarca4 "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4" species:10090 "Mus musculus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792 "heterochromatin" evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=ISO] [GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic development" evidence=IMP] [GO:0001832 "blastocyst growth" evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP] [GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53 binding" evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA] [GO:0003713 "transcription coactivator activity" evidence=ISO] [GO:0003714 "transcription corepressor activity" evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005615 "extracellular space" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA] [GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=ISO;IMP] [GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=ISO;IMP] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO] [GO:0007399 "nervous system development" evidence=IMP] [GO:0007403 "glial cell fate determination" evidence=IMP] [GO:0007507 "heart development" evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity" evidence=ISO] [GO:0008134 "transcription factor binding" evidence=IPI] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS] [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular matrix organization" evidence=IMP] [GO:0030216 "keratinocyte differentiation" evidence=IMP] [GO:0030308 "negative regulation of cell growth" evidence=ISO] [GO:0030900 "forebrain development" evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP] [GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388 "positive regulation of DNA binding" evidence=IGI] [GO:0043923 "positive regulation by host of viral transcription" evidence=ISO] [GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISO] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485 "protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=ISO] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation" evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=ISO] [GO:0070307 "lens fiber cell development" evidence=IMP] [GO:0070577 "histone acetyl-lysine binding" evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0030308 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338 GO:GO:0000122 GO:GO:0051091 GO:GO:0006366 GO:GO:0001570 GO:GO:0071564 GO:GO:0016514 GO:GO:0003407 GO:GO:0071565 GO:GO:0000902 GO:GO:0000977 GO:GO:0004386 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902 GO:GO:0006334 GO:GO:0001105 GO:GO:0048730 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0000792 GO:GO:0060347 GO:GO:0071778 GO:GO:0070307 GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0008094 GO:GO:0001835 GO:GO:0007403 GO:GO:0060766 GO:GO:0006346 GO:GO:0010424 GO:GO:0043923 GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 TreeFam:TF300785 GO:GO:0035887 CTD:6597 EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560 RefSeq:NP_001167549.1 RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593 ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 BioGrid:203336 DIP:DIP-40650N DIP:DIP-59249N IntAct:Q3TKT4 MINT:MINT-1958721 STRING:10090.ENSMUSP00000096547 PhosphoSite:Q3TKT4 PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707 Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586 KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7 NextBio:298883 PRO:PR:Q3TKT4 ArrayExpress:Q3TKT4 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4)

HSP 1 Score: 55.8398 bits (133), Expect = 1.052e-8
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   KL K
Sbjct:  443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499          
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:Smarca4 "Transcription activator BRG1" species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development" evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003407 "neural retina development" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714 "transcription corepressor activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate determination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0030198 "extracellular matrix organization" evidence=IEA] [GO:0030216 "keratinocyte differentiation" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA] [GO:0043923 "positive regulation by host of viral transcription" evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0030308 GO:GO:0006200 GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122 GO:GO:0051091 GO:GO:0006366 GO:GO:0001570 GO:GO:0071564 GO:GO:0016514 GO:GO:0003407 GO:GO:0071565 GO:GO:0000902 GO:GO:0000977 GO:GO:0004386 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902 GO:GO:0001105 GO:GO:0048730 GO:GO:0006337 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0000792 GO:GO:0060347 GO:GO:0071778 GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0008094 GO:GO:0001835 GO:GO:0007403 GO:GO:0060766 GO:GO:0006346 GO:GO:0010424 GO:GO:0043923 GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887 CTD:6597 UniGene:Rn.23417 OMA:RGMKYLR EMBL:AABR06053685 RefSeq:NP_599195.1 Ensembl:ENSRNOT00000013165 GeneID:171379 KEGG:rno:171379 NextBio:35583886 ArrayExpress:G3V790 Uniprot:G3V790)

HSP 1 Score: 55.8398 bits (133), Expect = 1.102e-8
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   KL K
Sbjct:  443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499          
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:Smarca4 "Transcription activator BRG1" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714 "transcription corepressor activity" evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0007399 "nervous system development" evidence=IEA] [GO:0071564 "npBAF complex" evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677 GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0043044 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363 HOVERGEN:HBG056636 EMBL:AJ504723 UniGene:Rn.23417 ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 PhosphoSite:Q8K1P7 PaxDb:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 Genevestigator:Q8K1P7 Uniprot:Q8K1P7)

HSP 1 Score: 55.8398 bits (133), Expect = 1.123e-8
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   KL K
Sbjct:  443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499          
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:Smarca4 "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4" species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792 "heterochromatin" evidence=IEA;ISO] [GO:0000902 "cell morphogenesis" evidence=IEA;ISO] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA;ISO] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA;ISO] [GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in utero embryonic development" evidence=ISO] [GO:0001832 "blastocyst growth" evidence=IEA;ISO] [GO:0001835 "blastocyst hatching" evidence=IEA;ISO] [GO:0001889 "liver development" evidence=IEA;ISO] [GO:0002039 "p53 binding" evidence=IEA;ISO] [GO:0003407 "neural retina development" evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity" evidence=ISO] [GO:0003714 "transcription corepressor activity" evidence=IEA;ISO;ISS] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005615 "extracellular space" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IEA;ISO] [GO:0005726 "perichromatin fibrils" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006337 "nucleosome disassembly" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=IEA;ISO] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA;ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0007399 "nervous system development" evidence=IEA;ISO] [GO:0007403 "glial cell fate determination" evidence=IEA;ISO] [GO:0007507 "heart development" evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA;ISO] [GO:0008134 "transcription factor binding" evidence=ISO] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA;ISO] [GO:0016514 "SWI/SNF complex" evidence=IEA;ISO;IDA] [GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell maintenance" evidence=IEA;ISO] [GO:0022008 "neurogenesis" evidence=ISO] [GO:0030198 "extracellular matrix organization" evidence=IEA;ISO] [GO:0030216 "keratinocyte differentiation" evidence=IEA;ISO] [GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO] [GO:0030900 "forebrain development" evidence=IEA;ISO] [GO:0030902 "hindbrain development" evidence=IEA;ISO] [GO:0030957 "Tat protein binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding" evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA;ISO] [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA;ISO] [GO:0043923 "positive regulation by host of viral transcription" evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation" evidence=IEA;ISO] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISO] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO] [GO:0047485 "protein N-terminus binding" evidence=IEA;ISO] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO] [GO:0048730 "epidermis morphogenesis" evidence=IEA;ISO] [GO:0050681 "androgen receptor binding" evidence=IEA;ISO] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA;ISO] [GO:0060347 "heart trabecula formation" evidence=IEA;ISO] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IEA;ISO] [GO:0070307 "lens fiber cell development" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding" evidence=IEA;ISO] [GO:0071564 "npBAF complex" evidence=IEA;ISO;ISS] [GO:0071565 "nBAF complex" evidence=IEA;ISO;ISS] [GO:0071778 "WINAC complex" evidence=IEA;ISO] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677 GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0043044 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363 HOVERGEN:HBG056636 EMBL:AJ504723 UniGene:Rn.23417 ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 PhosphoSite:Q8K1P7 PaxDb:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 Genevestigator:Q8K1P7 Uniprot:Q8K1P7)

HSP 1 Score: 55.8398 bits (133), Expect = 1.123e-8
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   KL K
Sbjct:  443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499          
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:smarca4 "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural retina development" evidence=IMP] [GO:0007417 "central nervous system development" evidence=IMP] [GO:0014032 "neural crest cell development" evidence=IMP] [GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina layer formation" evidence=IMP] [GO:0021634 "optic nerve formation" evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP] [GO:0060973 "cell migration involved in heart development" evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038 "cardiac muscle cell proliferation" evidence=IMP] [GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185 "activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030605-1 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0030182 GO:GO:0008152 GO:GO:0003677 GO:GO:0007417 GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596 KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363 HOVERGEN:HBG056636 TreeFam:TF300785 CTD:6597 OMA:RGMKYLR GO:GO:0060973 GO:GO:0021634 EMBL:BX322663 EMBL:BC163918 EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 RefSeq:NP_853634.1 RefSeq:XP_005163923.1 UniGene:Dr.2414 STRING:7955.ENSDARP00000008610 Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295 KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 Uniprot:Q7ZSY3)

HSP 1 Score: 55.8398 bits (133), Expect = 1.188e-8
Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   K+ K
Sbjct:  461 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITAKMQK 517          
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA4 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development" evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003407 "neural retina development" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714 "transcription corepressor activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate determination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0030198 "extracellular matrix organization" evidence=IEA] [GO:0030216 "keratinocyte differentiation" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA] [GO:0043923 "positive regulation by host of viral transcription" evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0030308 GO:GO:0006200 GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122 GO:GO:0051091 GO:GO:0006366 GO:GO:0001570 GO:GO:0071564 GO:GO:0016514 GO:GO:0003407 GO:GO:0071565 GO:GO:0000902 GO:GO:0000977 GO:GO:0004386 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902 GO:GO:0001105 GO:GO:0048730 GO:GO:0006337 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0000792 GO:GO:0060347 GO:GO:0071778 GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0008094 GO:GO:0001835 GO:GO:0007403 GO:GO:0060766 GO:GO:0006346 GO:GO:0010424 GO:GO:0043923 GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 TreeFam:TF300785 GO:GO:0035887 OMA:RGMKYLR EMBL:AAEX03012414 Ensembl:ENSCAFT00000027907 Uniprot:E2RJ89)

HSP 1 Score: 55.4546 bits (132), Expect = 1.688e-8
Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   K+ K
Sbjct:  443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 499          
BLAST of EMLSAG00000000927 vs. GO
Match: - (symbol:SMARCA4 "Transcription activator BRG1" species:9913 "Bos taurus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development" evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003407 "neural retina development" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714 "transcription corepressor activity" evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346 "methylation-dependent chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate determination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG sequence" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0030198 "extracellular matrix organization" evidence=IEA] [GO:0030216 "keratinocyte differentiation" evidence=IEA] [GO:0030308 "negative regulation of cell growth" evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth muscle cell differentiation" evidence=IEA] [GO:0043388 "positive regulation of DNA binding" evidence=IEA] [GO:0043923 "positive regulation by host of viral transcription" evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060766 "negative regulation of androgen receptor signaling pathway" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 PROSITE:PS51666 SMART:SM00297 SMART:SM00490 SMART:SM00592 SMART:SM00951 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0030308 GO:GO:0006200 GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122 GO:GO:0051091 GO:GO:0006366 GO:GO:0001570 GO:GO:0071564 GO:GO:0016514 GO:GO:0003407 GO:GO:0071565 GO:GO:0000902 GO:GO:0000977 GO:GO:0004386 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902 GO:GO:0001105 GO:GO:0048730 GO:GO:0006337 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018359 PROSITE:PS00633 GO:GO:0000792 GO:GO:0060347 GO:GO:0071778 GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659 OrthoDB:EOG771265 InterPro:IPR013999 InterPro:IPR014012 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0008094 GO:GO:0001835 GO:GO:0007403 GO:GO:0060766 GO:GO:0006346 GO:GO:0010424 GO:GO:0043923 GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 TreeFam:TF300785 GO:GO:0035887 OMA:RGMKYLR EMBL:DAAA02019479 EMBL:DAAA02019480 EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46 Uniprot:F1MJ46)

HSP 1 Score: 55.4546 bits (132), Expect = 1.702e-8
Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   K+ K
Sbjct:  435 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 491          
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890136|gb|GAXK01068239.1| (TSA: Calanus finmarchicus comp17614_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 50.8322 bits (120), Expect = 1.923e-7
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            +E+LEKQ RVE+ERK R +H E++  + +H R+ Q +HKNN  K+ K
Sbjct: 1468 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 1608          
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890137|gb|GAXK01068238.1| (TSA: Calanus finmarchicus comp17614_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 50.8322 bits (120), Expect = 1.991e-7
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            +E+LEKQ RVE+ERK R +H E++  + +H R+ Q +HKNN  K+ K
Sbjct: 1468 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 1608          
BLAST of EMLSAG00000000927 vs. C. finmarchicus
Match: gi|592890132|gb|GAXK01068243.1| (TSA: Calanus finmarchicus comp17614_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 50.447 bits (119), Expect = 2.070e-7
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   24 SEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            +E+LEKQ RVE+ERK R +H E++  + +H R+ Q +HKNN  K+ K
Sbjct: 3290 TERLEKQQRVESERKRRAKHSEYINAVLTHSREMQAWHKNNVQKVQK 3430          
BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Match: EMLSAP00000000927 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1161:15715:16165:-1 gene:EMLSAG00000000927 transcript:EMLSAT00000000927 description:"maker-LSalAtl2s1161-snap-gene-0.17")

HSP 1 Score: 193.741 bits (491), Expect = 4.527e-65
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
Query:    1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW 93
            MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW
Sbjct:    1 MGVACPPPSEGAEKKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKTMPRKSRKKRQRDLKKRDQEPLW 93          
BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Match: EMLSAP00000009416 (pep:novel supercontig:LSalAtl2s:LSalAtl2s600:248324:253025:1 gene:EMLSAG00000009416 transcript:EMLSAT00000009416 description:"maker-LSalAtl2s600-snap-gene-2.21")

HSP 1 Score: 85.8853 bits (211), Expect = 1.394e-20
Identity = 43/58 (74.14%), Postives = 47/58 (81.03%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKT 71
            K+QG  EA  +EKLEKQ R EAERK RQRHQE+L  I SH RDFQ+FHKNNQMKLLKT
Sbjct:  137 KRQGLREARATEKLEKQQRXEAERKRRQRHQEYLNAILSHARDFQNFHKNNQMKLLKT 194          
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|19857556|sp|P25439.2|BRM_DROME (RecName: Full=ATP-dependent helicase brm; AltName: Full=Homeotic gene regulator; AltName: Full=Protein brahma)

HSP 1 Score: 60.077 bits (144), Expect = 5.664e-11
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+H EFL  +  H +D + FH+NN+ +L
Sbjct:  484 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 538          
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|123790047|sp|Q3TKT4.1|SMCA4_MOUSE (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4)

HSP 1 Score: 55.8398 bits (133), Expect = 1.701e-9
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   KL K
Sbjct:  443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499          
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|81914599|sp|Q8K1P7.1|SMCA4_RAT (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4)

HSP 1 Score: 55.8398 bits (133), Expect = 1.822e-9
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   KL K
Sbjct:  443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQK 499          
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|288559138|sp|A7Z019.1|SMCA4_BOVIN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4)

HSP 1 Score: 55.4546 bits (132), Expect = 2.825e-9
Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   K+ K
Sbjct:  435 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 491          
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|116242792|sp|P51532.2|SMCA4_HUMAN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Mitotic growth and transcription activator; AltName: Full=Protein BRG-1; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4)

HSP 1 Score: 55.0694 bits (131), Expect = 3.178e-9
Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   K+ K
Sbjct:  443 KRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK 499          
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|81884744|sp|Q6DIC0.1|SMCA2_MOUSE (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2)

HSP 1 Score: 54.299 bits (129), Expect = 5.925e-9
Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   K+ K
Sbjct:  424 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 480          
BLAST of EMLSAG00000000927 vs. SwissProt
Match: gi|212276472|sp|P51531.2|SMCA2_HUMAN (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; Short=hBRM; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2)

HSP 1 Score: 54.299 bits (129), Expect = 6.534e-9
Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+Q   EA  +EKLEKQ ++E ERK RQ+HQE+L +I  H +DF+ +H++   K+ K
Sbjct:  419 KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQK 475          
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|EEZ97706.2| (brahma [Tribolium castaneum])

HSP 1 Score: 68.9366 bits (167), Expect = 2.056e-14
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NNQ KL
Sbjct:  264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318          
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|KYB25021.1| (brahma [Tribolium castaneum])

HSP 1 Score: 68.9366 bits (167), Expect = 2.056e-14
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NNQ KL
Sbjct:  264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318          
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|KYB25022.1| (brahma [Tribolium castaneum])

HSP 1 Score: 68.9366 bits (167), Expect = 2.264e-14
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NNQ KL
Sbjct:  217 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 271          
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: gb|KYB25018.1| (brahma [Tribolium castaneum])

HSP 1 Score: 68.9366 bits (167), Expect = 2.635e-14
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NNQ KL
Sbjct:  487 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 541          
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: XP_016773027.1 (PREDICTED: ATP-dependent helicase brm [Apis mellifera])

HSP 1 Score: 66.2402 bits (160), Expect = 1.878e-13
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NN  KL
Sbjct:  914 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKL 968          
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: EAA07201.4 (AGAP010462-PA, partial [Anopheles gambiae str. PEST])

HSP 1 Score: 64.6994 bits (156), Expect = 6.621e-13
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ +H+NN  KL
Sbjct:  492 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLASVLQHGKDFKEYHRNNIAKL 546          
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: EFX72834.1 (hypothetical protein DAPPUDRAFT_215757 [Daphnia pulex])

HSP 1 Score: 62.7734 bits (151), Expect = 3.032e-12
Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLKT 71
            KKQG  EA  +EKLEKQ ++EAER+ RQ+HQE+L  +  H +D + FH+NN  K+++ 
Sbjct:  440 KKQGLREARATEKLEKQQKMEAERRRRQKHQEYLTAVLQHGKDLKEFHRNNLAKIVRI 497          
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: EEB11322.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 61.2326 bits (147), Expect = 1.053e-11
Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMK 67
            K+QG  EA  +EKLEKQ + EAERK RQ+HQE+L  +  H +DF+ +H+NN  K
Sbjct:  365 KRQGLREARATEKLEKQQKFEAERKRRQKHQEYLAAVLQHSKDFKEYHRNNLAK 418          
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: AAN11774.1 (brahma, isoform D [Drosophila melanogaster])

HSP 1 Score: 60.077 bits (144), Expect = 2.666e-11
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+H EFL  +  H +D + FH+NN+ +L
Sbjct:  480 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 534          
BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Match: AAN11773.1 (brahma, isoform C [Drosophila melanogaster])

HSP 1 Score: 60.077 bits (144), Expect = 2.666e-11
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+H EFL  +  H +D + FH+NN+ +L
Sbjct:  480 KRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQL 534          
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1073535903|gb|JAT85063.1| (hypothetical protein g.8451, partial [Pectinophora gossypiella])

HSP 1 Score: 70.4774 bits (171), Expect = 1.307e-12
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL T+  H +DF+ FH+NN  KL
Sbjct:  101 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEFHRNNVSKL 155          
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1133425729|ref|XP_019868655.1| (PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase brm-like [Aethina tumida])

HSP 1 Score: 69.3218 bits (168), Expect = 7.757e-12
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NNQ KL++
Sbjct:  391 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKDFHRNNQAKLVR 447          
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395637|gb|EEZ97706.2| (brahma [Tribolium castaneum])

HSP 1 Score: 68.9366 bits (167), Expect = 1.006e-11
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NNQ KL
Sbjct:  264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318          
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395636|gb|KYB25021.1| (brahma [Tribolium castaneum])

HSP 1 Score: 68.9366 bits (167), Expect = 1.006e-11
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NNQ KL
Sbjct:  264 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 318          
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1004395638|gb|KYB25022.1| (brahma [Tribolium castaneum])

HSP 1 Score: 68.9366 bits (167), Expect = 1.108e-11
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NNQ KL
Sbjct:  217 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 271          
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937367|ref|XP_008198808.1| (PREDICTED: ATP-dependent helicase brm isoform X2 [Tribolium castaneum] >gi|1004395633|gb|KYB25018.1| brahma [Tribolium castaneum])

HSP 1 Score: 68.9366 bits (167), Expect = 1.289e-11
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NNQ KL
Sbjct:  487 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 541          
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937363|ref|XP_008198806.1| (PREDICTED: ATP-dependent helicase brm isoform X1 [Tribolium castaneum] >gi|642937365|ref|XP_008198807.1| PREDICTED: ATP-dependent helicase brm isoform X1 [Tribolium castaneum])

HSP 1 Score: 68.9366 bits (167), Expect = 1.289e-11
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NNQ KL
Sbjct:  487 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 541          
BLAST of EMLSAG00000000927 vs. nr
Match: gi|642937369|ref|XP_008198809.1| (PREDICTED: ATP-dependent helicase brm isoform X3 [Tribolium castaneum])

HSP 1 Score: 68.5514 bits (166), Expect = 1.393e-11
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL ++  H +DF+ FH+NNQ KL
Sbjct:  440 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNQAKL 494          
BLAST of EMLSAG00000000927 vs. nr
Match: gi|1041531429|ref|XP_017301764.1| (PREDICTED: ATP-dependent helicase brm [Diaphorina citri])

HSP 1 Score: 68.5514 bits (166), Expect = 1.514e-11
Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+QG  EA  +EKLEKQ +VEAERK RQ+HQE++ T+  H +DF+ +H+NNQ ++++
Sbjct:  280 KRQGLKEARATEKLEKQQKVEAERKKRQKHQEYITTVLQHCKDFKEYHRNNQARIMR 336          
BLAST of EMLSAG00000000927 vs. nr
Match: gi|930665571|gb|KPJ06699.1| (ATP-dependent helicase brm [Papilio machaon])

HSP 1 Score: 67.781 bits (164), Expect = 2.896e-11
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKL 68
            K+QG  EA  +EKLEKQ ++EAERK RQ+HQEFL T+  H +DF+ +H+NN  KL
Sbjct:  523 KRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEYHRNNVAKL 577          
BLAST of EMLSAG00000000927 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold495_size155559-snap-gene-0.32 (protein:Tk09239 transcript:maker-scaffold495_size155559-snap-gene-0.32-mRNA-1 annotation:"homeotic gene")

HSP 1 Score: 66.2402 bits (160), Expect = 1.592e-14
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
Query:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
            K+QG  EA  +EKLEKQ R+EAER+ RQ+HQE+L  + +H RD Q+FH+NN  K+ K
Sbjct:  323 KRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQK 379          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000927 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 24
Match NameE-valueIdentityDescription
-1.729e-1041.27symbol:R4GKI2 "Uncharacterized protein" species:90... [more]
-4.086e-1052.73symbol:brm "brahma" species:7227 "Drosophila melan... [more]
-9.379e-947.37symbol:SMARCA2 "Probable global transcription acti... [more]
-1.052e-849.12symbol:Smarca4 "SWI/SNF related, matrix associated... [more]
-1.102e-849.12symbol:Smarca4 "Transcription activator BRG1" spec... [more]
-1.123e-849.12symbol:Smarca4 "Transcription activator BRG1" spec... [more]
-1.123e-849.12symbol:Smarca4 "SWI/SNF related, matrix associated... [more]
-1.188e-847.37symbol:smarca4 "SWI/SNF related, matrix associated... [more]
-1.688e-847.37symbol:SMARCA4 "Uncharacterized protein" species:9... [more]
-1.702e-847.37symbol:SMARCA4 "Transcription activator BRG1" spec... [more]

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BLAST of EMLSAG00000000927 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 3
Match NameE-valueIdentityDescription
gi|592890136|gb|GAXK01068239.1|1.923e-748.94TSA: Calanus finmarchicus comp17614_c0_seq2 transc... [more]
gi|592890137|gb|GAXK01068238.1|1.991e-748.94TSA: Calanus finmarchicus comp17614_c0_seq1 transc... [more]
gi|592890132|gb|GAXK01068243.1|2.070e-748.94TSA: Calanus finmarchicus comp17614_c1_seq1 transc... [more]
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BLAST of EMLSAG00000000927 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000009274.527e-65100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1161:1571... [more]
EMLSAP000000094161.394e-2074.14pep:novel supercontig:LSalAtl2s:LSalAtl2s600:24832... [more]
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BLAST of EMLSAG00000000927 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
gi|19857556|sp|P25439.2|BRM_DROME5.664e-1152.73RecName: Full=ATP-dependent helicase brm; AltName:... [more]
gi|123790047|sp|Q3TKT4.1|SMCA4_MOUSE1.701e-949.12RecName: Full=Transcription activator BRG1; AltNam... [more]
gi|81914599|sp|Q8K1P7.1|SMCA4_RAT1.822e-949.12RecName: Full=Transcription activator BRG1; AltNam... [more]
gi|288559138|sp|A7Z019.1|SMCA4_BOVIN2.825e-947.37RecName: Full=Transcription activator BRG1; AltNam... [more]
gi|116242792|sp|P51532.2|SMCA4_HUMAN3.178e-947.37RecName: Full=Transcription activator BRG1; AltNam... [more]
gi|81884744|sp|Q6DIC0.1|SMCA2_MOUSE5.925e-947.37RecName: Full=Probable global transcription activa... [more]
gi|212276472|sp|P51531.2|SMCA2_HUMAN6.534e-947.37RecName: Full=Probable global transcription activa... [more]
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BLAST of EMLSAG00000000927 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 17
Match NameE-valueIdentityDescription
gb|EEZ97706.2|2.056e-1460.00brahma [Tribolium castaneum][more]
gb|KYB25021.1|2.056e-1460.00brahma [Tribolium castaneum][more]
gb|KYB25022.1|2.264e-1460.00brahma [Tribolium castaneum][more]
gb|KYB25018.1|2.635e-1460.00brahma [Tribolium castaneum][more]
XP_016773027.11.878e-1358.18PREDICTED: ATP-dependent helicase brm [Apis mellif... [more]
EAA07201.46.621e-1356.36AGAP010462-PA, partial [Anopheles gambiae str. PES... [more]
EFX72834.13.032e-1250.00hypothetical protein DAPPUDRAFT_215757 [Daphnia pu... [more]
EEB11322.11.053e-1153.70conserved hypothetical protein [Pediculus humanus ... [more]
AAN11774.12.666e-1152.73brahma, isoform D [Drosophila melanogaster][more]
AAN11773.12.666e-1152.73brahma, isoform C [Drosophila melanogaster][more]

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BLAST of EMLSAG00000000927 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|1073535903|gb|JAT85063.1|1.307e-1260.00hypothetical protein g.8451, partial [Pectinophora... [more]
gi|1133425729|ref|XP_019868655.1|7.757e-1257.89PREDICTED: LOW QUALITY PROTEIN: ATP-dependent heli... [more]
gi|1004395637|gb|EEZ97706.2|1.006e-1160.00brahma [Tribolium castaneum][more]
gi|1004395636|gb|KYB25021.1|1.006e-1160.00brahma [Tribolium castaneum][more]
gi|1004395638|gb|KYB25022.1|1.108e-1160.00brahma [Tribolium castaneum][more]
gi|642937367|ref|XP_008198808.1|1.289e-1160.00PREDICTED: ATP-dependent helicase brm isoform X2 [... [more]
gi|642937363|ref|XP_008198806.1|1.289e-1160.00PREDICTED: ATP-dependent helicase brm isoform X1 [... [more]
gi|642937369|ref|XP_008198809.1|1.393e-1160.00PREDICTED: ATP-dependent helicase brm isoform X3 [... [more]
gi|1041531429|ref|XP_017301764.1|1.514e-1152.63PREDICTED: ATP-dependent helicase brm [Diaphorina ... [more]
gi|930665571|gb|KPJ06699.1|2.896e-1158.18ATP-dependent helicase brm [Papilio machaon][more]

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BLAST of EMLSAG00000000927 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold495_size155559-snap-gene-0.321.592e-1456.14protein:Tk09239 transcript:maker-scaffold495_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1161supercontigLSalAtl2s1161:15715..16165 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1161-snap-gene-0.17
Biotypeprotein_coding
EvidenceIEA
NoteATP-dependent helicase brm
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000927 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000927EMLSAT00000000927-696774Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1161:15715..16165-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000927-683693 ID=EMLSAG00000000927-683693|Name=EMLSAG00000000927|organism=Lepeophtheirus salmonis|type=gene|length=451bp|location=Sequence derived from alignment at LSalAtl2s1161:15715..16165- (Lepeophtheirus salmonis)
ATGGGCGTCGCGTGTCCCCCACCAAGTGAAGGAGCTGAGTGATTTTCTCC TCAACATGGCGCTGTACCTGTGACTGTATGTGGAGATTGAGCTGCGTGCC CTGCGGCTAMTGAATTCGCAGTGGCAGSTCGACACGGRGGKGTTTGSTTC CMCTCTGAGGGACACGACCCTGGAGACAGCCATCAATGTGAAAACGTAGC AGAGAAGGAAGAAGCAAGGGGGTGGGGAGGCTTGCACCTCCGAGAAGTTG GAGAAGCAACACCGGGTGGAAGCGGAGCGGAAGTGCAGACAGAGACACCA GGAATTCTTATATACCATATTCAGTCATGTCAGGGATTTTCAACATTTTC ATAAGAACAACCAAATGAAACTTCTAAAGACAATGCCGAGAAAGAGCAGA AAAAAGAGGCAGAGAGACTTGAAAAAGAGAGATCAAGAGCCCTTATGGTA G
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