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Associated RNAi Experiments
Homology
BLAST of EMLSAG00000001018 vs. L. salmonis peptides
Match: EMLSAP00000001018 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:914383:918020:1 gene:EMLSAG00000001018 transcript:EMLSAT00000001018 description:"snap_masked-LSalAtl2s116-processed-gene-10.14") HSP 1 Score: 131.724 bits (330), Expect = 1.861e-41 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
Query: 1 MGTIWRWLTGEDIIQKHKLKTSSSSRRSKRSYHGGSSRRSVRSSARSRASSRRKHHKVAEVCIAVKRKL 69
MGTIWRWLTGEDIIQKHKLKTSSSSRRSKRSYHGGSSRRSVRSSARSRASSRRKHHKVAEVCIAVKRKL
Sbjct: 1 MGTIWRWLTGEDIIQKHKLKTSSSSRRSKRSYHGGSSRRSVRSSARSRASSRRKHHKVAEVCIAVKRKL 69
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001018 vs. GO
Analysis Date: 2014-04-02 ( Blast vs. GO)
Total hits: 0
Match Name | E-value | Identity | Description | |
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BLAST of EMLSAG00000001018 vs. L. salmonis peptides
Analysis Date: 2014-05-10 ( Blastp vs. self)
Total hits: 1
Match Name | E-value | Identity | Description | |
EMLSAP00000001018 | 1.861e-41 | 100.00 | pep:novel supercontig:LSalAtl2s:LSalAtl2s116:91438... | [more] |
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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s116 | supercontig | LSalAtl2s116:914383..918020 + |
Analyses
This gene is derived from or has results from the following analyses
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Description | snap_masked-LSalAtl2s116-processed-gene-10.14 |
Biotype | protein_coding |
Evidence | IEA |
Note | Hypothetical protein |
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s116:914383..918020+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAG00000001018-683784 ID=EMLSAG00000001018-683784|Name=EMLSAG00000001018|organism=Lepeophtheirus salmonis|type=gene|length=3638bp|location=Sequence derived from alignment at LSalAtl2s116:914383..918020+ (Lepeophtheirus salmonis) ATGGGCACGATTTGGAGATGGCTCACAGGGGAGGACATTATTCAAAAACA
TAAGTTAAAGACTTCTTCTTCAAGTCGTCGCTCTAAGCGATCCTATCATG
GGGGATCAAGTCGACGTAGTGTTCGTTCTTCTGCACGGAGTAGGGCTTCA
TCTCGACGAAAGCATCACAAGGTCGGTTAAATTAAAATAACTTATTTTCT
TATTTGTTAGCAACGTCATCATCATCCATTCTTTTAATGGTTTCTTTCTA
ATGCATGCACAATAGAATGTCCCGTTGTCGAGCTAATATTTTTCTCTCTC
TGCTCAATGACCTATCCTGGGGGGAAACACTCCAAAAACTGACTTTGAGA
AAGTTACAGGCCTCTCAGGTCATTTTTGGGGTGGTACAACTATTTAAGTT
TGATTTTGTTTGTGTGTGTAAATTCCCCATTTTTAGGCCTTTATTAATGT
TCCAAATATGATGATGCTGTGAGTAAAAAATTGTACTCGTATATATTTAG
TATTCTCTTCTTCTGTTAAAAATATTTTCCATCTTCTTATTAATCATTAA
GGCCTCTAAGATGTGCTCAATGATTTACAGTTTCCCTCTCAAAATGCTAG
TAGTTTATACTGTATTGGTATATGATATACAATTGGGAGCACCATATACA
GTGGACTCTGTGACTCTTTATTACTGCTCCCTTATGTATATGATTGATAA
TTCCTGAGCATTTTAATTATATTCTAAGAGTTGAATAAAATATTAAGACT
ATAATATAAATTTATAAAATATAGAATTAATTTTGTTAGTGAGCGCTCTA
GAGAATAATGTATAATCATATCATTCATTTTTCCCTCAAATTCTTATTTA
TTGAGGAGAAAACACGTCATATGAATTTTTATATGTATAAAGTAGTTACG
TGTGCGTGTCCACATGAAAAACGGAGAGTAAATGCCGGTTATCACATCTA
TCGTACGACGTTTAAGTGTGTATATATATAGGTATATACATATACAATAG
ATGCAGTAAACCTCATCAACACTAAGGATTTATTAGGGTGTTACCTTCTA
CATTTTTAGGTTAGTTTGTCTATTTGACGATGCCTAATAGCTCCAAACAA
TACCTCTAGTCTTCTATTTAATTAAAGCAACGTGTCTCTTTTTGTTGACG
CCTAACAACTCCCGTTAGTGTTATATAAAATAGGGACACCCCCAATCATT
AAGTACACATTTGACCCAAAAAAACTTATTTGTTTTCCAAATTTAATTGC
CCTGTGAGGTCTGTAACTTTCTTAAAGTCAGTTTTTAGATTCTCCCTATA
AAAAAATGTCTTAATTCACCTAAAAACGGAGCAGTCTAATCATCATATAA
TTTTTTCTTAAGCATATGTAGGTATATTATGTAGATTAAACGTACATATG
TTGTGTTTTTTGTTTGTTATTTTCATATTGAAGAAGGGTTACTTCATATT
TGTATACGTTCATCAAATAGGATTGTGCATATGCCTCACTGATGATGATG
ATCCATTTATTAAGCATATTTCTTCATGAATTAAAATAACTGTGTATGAT
GTTTAAAACAAGTCCAACAATTATTATTATTGAGATGTTTACTTGGGCGC
TTCGTACTTTTGCCTTAGGATATTTTTCATCTAGGACATTTTGTCATAAT
ATATAAATAAATGATGTTTATATTTCGTTATTGTTTATTTTTGGTTACAA
TTTATGTTCCTTTTGAATTTTGAAATCAAAATACGTAATATATGTATGTT
ACTATAAAACGTATTAAATGGCTGTTTCTACCGAAAAAATGATGGAGTTA
TTTCCCCAAATTTTAATGCATACATACTATCAAAATCTGACTATGTAATG
AGTTCTAACCAGAGACAAAGTATATATGTAATACAATTAGTACAATAAAA
ATGCAATAATGACTGTTATAGAAGAAGAGACAATCACTTCTCCGTTATTA
ACTAAGATTAGACTTGACGGATTATTCATTTTAGAAAATACTCATGGATT
GATAAACAACCATAATATGATGCAAGAACATAATTCCATCCTCCTCATTC
CAAAAGGCAACAAACATTTATAGTCTTAAATATTACATAAATATGTGCAT
TCGGGTACAAACACTTTTTCGACAAAAAATACTACAATTCATATGCGCTA
ACAGGGTTTTGCTTGGGTTAGTGGGAGAGTATTAGCTAAGAAATTCAATA
GAAATATAAAGAACAGTATTCATTCTTCTATTTTTGTATAGCGAACAATT
TTTGAGCTCATAAATTGCAGGTATCGGCCCTTATATCACTTTTGTATGGT
ACTGTTTTAACTGAATCGGTCCTCTGGTACCACTATAGTTCACCTGGGTA
CCAAATAACACTAATATAGGCTATATTAGTAACACATGGTCTGAAAGATC
CTAAGCTTCAAAAATAGATGGTGCTGTTTTTATATATCTTATTTTCAGTT
AGTAGCAGCCTTCAAAGAACAGCTGTCAAAATTTGATGACAATCTGTTTT
TTAGTGAGATTGTTATTGTACTAAGTGTGACGCCACTTTTGTTATTTACA
GTCTGCATGTACAAGTTAAAAATTCTACAAAATCGCAACTTGTACGCAAT
ATGTATATTTATACCTTAGGCGTCAATTATATGACTTCCAGAGAAGGAGC
GGGAGGGGGTCTAAGAAATTGACAAAATCTAACATGTTTGATGATGGAGG
GGTTAAAATGAGAGAAGGTTGATCAAGAAATGGTGCACCACAATTGCTGG
AGGATCCAAAGAAGCAATTATACATATAATAGGAGGAAKCAGTAATTTGT
GGTGAATACATAATGAAATAAGGAGAGGCTCGTTTAAAAAGAAGATATGC
AAAAACATGGAGAACCTGTTGCATTTGTAATCGATAATACTCCTTCTCGT
TTGAAAGTGGAATATATTCTAACGGGGGATTTAGCTTGATGTAATATAAT
TATCATTGGGCCCCTATTGTCCTATGCTCAATCCAATTGAAAATATTTGG
TCAATTATAAAGAGTCACATGAAAGAAGAACTTGCCAAAAAGCTATCAAA
TATTTTAAACTCCAAAATCTAACCATTCAAGAGAAAGGGCTAAGATACTT
AGAACTACTTGTCTAAAAAGCAACACCCAAATTMCTCCTCTAGAAACCTG
TACAAGATGTATCGTTAGTATACAAAATAAGGTCAGCGCTGCTTTAAATC
TTGAGGATATGACTTTTTAAAAGAATATACAAAACCATTTATTGTTATTA
TGTATATTTATATAAATATACATAATCATTTTGTATATTCTAATACTAAT
AATATAAATATATTATATTCCAGAATATGTATACCTTTAAAGTCCTAATT
ATATGCCTATTACTTTCAACCATATACATATTTGAGTATAGACAACTATT
TTTTGACTACCCTTAATTTAAGTTTGAATATTCCGATTTTGAATTGGACT
ATTCCGTTTGGAACTGGACAGTTGCTATTTTGAATTGGAAATTGTATAGT
AGTAGCTAAATCTTTTGTGAATCAATATGAATAGACTTGTATTCCATTTA
TATATATAAACAAGGCCTTACTAATGAAGTAGGCTATTTATTTATTTATG
TAGCGGAAGTATGCATTGCAGTTAAAAGGAAATTATAA back to top
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