EMLSAG00000001096, EMLSAG00000001096-683862 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001096
Unique NameEMLSAG00000001096-683862
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:hsp70.3 "heat shock cognate 70-kd protein, tandem duplicate 3" species:7955 "Danio rerio" [GO:0048593 "camera-type eye morphogenesis" evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006950 "response to stress" evidence=IEA] Pfam:PF00012 Prosite:PS01036 ZFIN:ZDB-GENE-110713-1 GO:GO:0005524 GO:GO:0048593 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 HOGENOM:HOG000228135 HOVERGEN:HBG051845 KO:K03283 CTD:30671 UniGene:Dr.115994 EMBL:AF210640 RefSeq:NP_571472.1 UniGene:Dr.114305 ProteinModelPortal:Q9IAC1 SMR:Q9IAC1 PRIDE:Q9IAC1 GeneID:30671 KEGG:dre:30671 InParanoid:Q9IAC1 NextBio:20807026 Uniprot:Q9IAC1)

HSP 1 Score: 44.2838 bits (103), Expect = 5.177e-5
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETV 43
            RE      +LESY +N+KS+VE D L+GK+S+EDK+ V
Sbjct:  535 REKISAKNSLESYAFNMKSSVEDDNLKGKISEEDKKRV 572
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:hspa8 "heat shock protein 8" species:7955 "Danio rerio" [GO:0031101 "fin regeneration" evidence=IEP] [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006950 "response to stress" evidence=IEA] Pfam:PF00012 Prosite:PS01036 ZFIN:ZDB-GENE-990415-92 GO:GO:0005524 GO:GO:0031101 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 HOGENOM:HOG000228135 HOVERGEN:HBG051845 EMBL:L77146 UniGene:Dr.75087 ProteinModelPortal:Q90473 SMR:Q90473 STRING:7955.ENSDARP00000090766 PRIDE:Q90473 InParanoid:Q90473 PRO:PR:Q90473 Uniprot:Q90473)

HSP 1 Score: 43.1282 bits (100), Expect = 1.319e-4
Identity = 18/31 (58.06%), Postives = 26/31 (83.87%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            LESY +N+KSTVE ++L+GK+S EDK+ + D
Sbjct:  542 LESYAFNMKSTVEDEKLKGKISDEDKQKILD 572
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:hsp70l "heat shock cognate 70-kd protein, like" species:7955 "Danio rerio" [GO:0009408 "response to heat" evidence=IDA] [GO:0046686 "response to cadmium ion" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006950 "response to stress" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA] Pfam:PF00012 Prosite:PS01036 ZFIN:ZDB-GENE-050321-1 GO:GO:0005524 GO:GO:0046686 GO:GO:0009408 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 HOVERGEN:HBG051845 EMBL:BC171454 EMBL:BC171480 UniGene:Dr.115994 Uniprot:B7ZV46)

HSP 1 Score: 43.1282 bits (100), Expect = 1.364e-4
Identity = 19/38 (50.00%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETV 43
            RE      +LESY +N+K++VE D L+GK+S+EDK+ V
Sbjct:  535 REKISAKNSLESYAFNMKNSVEDDNLKGKISEEDKKRV 572
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA2 "Heat shock-related 70 kDa protein 2" species:9606 "Homo sapiens" [GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006986 "response to unfolded protein" evidence=TAS] [GO:0007140 "male meiosis" evidence=TAS] [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0036128 "CatSper complex" evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=TAS] [GO:0051861 "glycolipid binding" evidence=IEA] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] [GO:0070194 "synaptonemal complex disassembly" evidence=IEA] [GO:0072562 "blood microparticle" evidence=IDA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005739 GO:GO:0005524 GO:GO:0070062 Reactome:REACT_115566 GO:GO:0072562 GO:GO:0009986 GO:GO:0007286 GO:GO:0051082 Reactome:REACT_111183 GO:GO:0001673 GO:GO:0007140 GO:GO:0006986 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0007141 GO:GO:0051861 GO:GO:0070194 GO:GO:0036128 HOGENOM:HOG000228135 GO:GO:0000795 HOVERGEN:HBG051845 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 CTD:3306 EMBL:L26336 EMBL:U56725 EMBL:BT009815 EMBL:DQ489378 EMBL:BC001752 EMBL:BC036107 EMBL:AH006615 PIR:A55719 PIR:I37564 RefSeq:NP_068814.2 UniGene:Hs.432648 PDB:3I33 PDB:4FSV PDBsum:3I33 PDBsum:4FSV ProteinModelPortal:P54652 SMR:P54652 BioGrid:109538 IntAct:P54652 MINT:MINT-1146083 STRING:9606.ENSP00000247207 ChEMBL:CHEMBL2062348 PhosphoSite:P54652 DMDM:1708307 REPRODUCTION-2DPAGE:IPI00007702 PaxDb:P54652 PeptideAtlas:P54652 PRIDE:P54652 DNASU:3306 Ensembl:ENST00000247207 Ensembl:ENST00000394709 GeneID:3306 KEGG:hsa:3306 UCSC:uc001xhj.3 GeneCards:GC14P065002 HGNC:HGNC:5235 HPA:HPA000798 MIM:140560 neXtProt:NX_P54652 PharmGKB:PA29501 InParanoid:P54652 OMA:RDIAGNK PhylomeDB:P54652 ChiTaRS:HSPA2 EvolutionaryTrace:P54652 GeneWiki:HSPA2 GenomeRNAi:3306 NextBio:13115 PRO:PR:P54652 Bgee:P54652 CleanEx:HS_HSPA2 Genevestigator:P54652 GO:GO:0031662 Uniprot:P54652)

HSP 1 Score: 43.1282 bits (100), Expect = 1.373e-4
Identity = 20/48 (41.67%), Postives = 30/48 (62.50%), Query Frame = 0 
Query:    3 KSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            ++ R+       LESY YN+K TVE ++LRGK+S++DK  + D    V
Sbjct:  533 EANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEV 580
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA8 "Heat shock cognate 71 kDa protein" species:9031 "Gallus gallus" [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0070062 "extracellular vesicular exosome" evidence=IEA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005524 GO:GO:0045892 GO:GO:0009986 GO:GO:0005730 GO:GO:0030529 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0000974 GeneTree:ENSGT00740000115252 OrthoDB:EOG7PCJGF OMA:PMIVVEY EMBL:AADN03008320 ProteinModelPortal:F1NWP3 SMR:F1NWP3 PRIDE:F1NWP3 Ensembl:ENSGALT00000010524 ArrayExpress:F1NWP3 Uniprot:F1NWP3)

HSP 1 Score: 42.743 bits (99), Expect = 1.773e-4
Identity = 18/45 (40.00%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK+S EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKISDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:hsc70 "heat shock cognate 70" species:7955 "Danio rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] Pfam:PF00012 Prosite:PS01036 ZFIN:ZDB-GENE-040426-1221 GO:GO:0005524 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 HOGENOM:HOG000228135 HOVERGEN:HBG051845 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 EMBL:CR944667 EMBL:BC056797 RefSeq:NP_956908.1 UniGene:Dr.85225 STRING:7955.ENSDARP00000039324 Ensembl:ENSDART00000031418 GeneID:393586 KEGG:dre:393586 CTD:393586 InParanoid:Q6PGX4 OMA:MVINEGG NextBio:20814606 Uniprot:Q6PGX4)

HSP 1 Score: 42.743 bits (99), Expect = 1.872e-4
Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            RE       LES  +N+KSTVE D+L+ K+S EDK+T+ D  + V
Sbjct:  533 REKVTAKNTLESLAFNMKSTVEDDKLQDKISPEDKKTITDKCNEV 577
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA2 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0036128 "CatSper complex" evidence=IEA] [GO:0051861 "glycolipid binding" evidence=IEA] [GO:0070194 "synaptonemal complex disassembly" evidence=IEA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005739 GO:GO:0005524 GO:GO:0009986 GO:GO:0007286 GO:GO:0001673 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0007141 GO:GO:0051861 GO:GO:0070194 GO:GO:0036128 GO:GO:0000795 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 CTD:3306 GO:GO:0031662 EMBL:CT842159 RefSeq:XP_003356782.1 Ensembl:ENSSSCT00000002532 GeneID:100621324 KEGG:ssc:100621324 OMA:NETHTFT Uniprot:F1SA70)

HSP 1 Score: 41.9726 bits (97), Expect = 3.138e-4
Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 0 
Query:    3 KSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            ++ R+       +ESY YN+K TVE ++LRGK+S++DK  + D    V
Sbjct:  533 EANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEV 580
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:P08106 "Heat shock 70 kDa protein" species:9031 "Gallus gallus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005576 "extracellular region" evidence=IDA] [GO:0009408 "response to heat" evidence=IDA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005524 GO:GO:0005576 GO:GO:0009408 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 HOGENOM:HOG000228135 HOVERGEN:HBG051845 KO:K03283 EMBL:J02579 PIR:A25646 RefSeq:NP_001006686.1 UniGene:Gga.4942 ProteinModelPortal:P08106 SMR:P08106 BioGrid:684024 IntAct:P08106 STRING:9031.ENSGALP00000019120 PaxDb:P08106 PRIDE:P08106 GeneID:423504 KEGG:gga:423504 CTD:3306 InParanoid:P08106 NextBio:20825972 PRO:PR:P08106 Uniprot:P08106)

HSP 1 Score: 41.9726 bits (97), Expect = 3.339e-4
Identity = 18/32 (56.25%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:   14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            +LESY YN+K TVE ++L+GK+S +DK+ V D
Sbjct:  544 SLESYTYNMKQTVEDEKLKGKISDQDKQKVLD 575
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:Hspa2 "Heat shock-related 70 kDa protein 2" species:10116 "Rattus norvegicus" [GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006950 "response to stress" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007275 "multicellular organismal development" evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0036128 "CatSper complex" evidence=ISS] [GO:0051861 "glycolipid binding" evidence=IEA] [GO:0070194 "synaptonemal complex disassembly" evidence=IEA] Pfam:PF00012 Prosite:PS01036 RGD:620664 GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0006950 GO:GO:0009986 GO:GO:0007286 GO:GO:0001673 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0007141 GO:GO:0051861 GO:GO:0070194 GO:GO:0036128 HOGENOM:HOG000228135 GO:GO:0000795 HOVERGEN:HBG051845 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 CTD:3306 OMA:RDIAGNK GO:GO:0031662 EMBL:X15705 EMBL:BC081803 PIR:S08211 RefSeq:NP_068635.1 RefSeq:XP_006240309.1 UniGene:Rn.211303 ProteinModelPortal:P14659 SMR:P14659 BioGrid:248845 IntAct:P14659 STRING:10116.ENSRNOP00000008504 PhosphoSite:P14659 PaxDb:P14659 PRIDE:P14659 Ensembl:ENSRNOT00000008504 GeneID:60460 KEGG:rno:60460 UCSC:RGD:620664 InParanoid:P14659 NextBio:612212 PRO:PR:P14659 Genevestigator:P14659 Uniprot:P14659)

HSP 1 Score: 41.9726 bits (97), Expect = 3.367e-4
Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 0 
Query:    3 KSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            ++ R+       +ESY YN+K TVE ++LRGK+S++DK  + D    V
Sbjct:  533 EANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEV 580
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:Hspa2 "heat shock protein 2" species:10116 "Rattus norvegicus" [GO:0000795 "synaptonemal complex" evidence=IEA;ISO] [GO:0001673 "male germ cell nucleus" evidence=IEA;ISO] [GO:0001934 "positive regulation of protein phosphorylation" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006950 "response to stress" evidence=IEA] [GO:0007140 "male meiosis" evidence=ISO] [GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275 "multicellular organismal development" evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO] [GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle" evidence=IEA;ISO] [GO:0036128 "CatSper complex" evidence=ISO;ISS] [GO:0051861 "glycolipid binding" evidence=IEA;ISO] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] [GO:0070194 "synaptonemal complex disassembly" evidence=IEA;ISO] [GO:0072562 "blood microparticle" evidence=ISO] Pfam:PF00012 Prosite:PS01036 RGD:620664 GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0006950 GO:GO:0009986 GO:GO:0007286 GO:GO:0001673 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0007141 GO:GO:0051861 GO:GO:0070194 GO:GO:0036128 HOGENOM:HOG000228135 GO:GO:0000795 HOVERGEN:HBG051845 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 CTD:3306 OMA:RDIAGNK GO:GO:0031662 EMBL:X15705 EMBL:BC081803 PIR:S08211 RefSeq:NP_068635.1 RefSeq:XP_006240309.1 UniGene:Rn.211303 ProteinModelPortal:P14659 SMR:P14659 BioGrid:248845 IntAct:P14659 STRING:10116.ENSRNOP00000008504 PhosphoSite:P14659 PaxDb:P14659 PRIDE:P14659 Ensembl:ENSRNOT00000008504 GeneID:60460 KEGG:rno:60460 UCSC:RGD:620664 InParanoid:P14659 NextBio:612212 PRO:PR:P14659 Genevestigator:P14659 Uniprot:P14659)

HSP 1 Score: 41.9726 bits (97), Expect = 3.367e-4
Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 0 
Query:    3 KSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            ++ R+       +ESY YN+K TVE ++LRGK+S++DK  + D    V
Sbjct:  533 EANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEV 580
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592938432|gb|GAXK01020121.1| (TSA: Calanus finmarchicus comp13797_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 2.083e-5
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:   14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            NLESYC+N+KST+E +  RGK+S+ D++ + D
Sbjct:  335 NLESYCFNMKSTLEDENARGKISEPDRKVITD 430
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592938433|gb|GAXK01020120.1| (TSA: Calanus finmarchicus comp13797_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 2.108e-5
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:   14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            NLESYC+N+KST+E +  RGK+S+ D++ + D
Sbjct:  347 NLESYCFNMKSTLEDENARGKISEPDRKVITD 442
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592935542|gb|GAXK01023011.1| (TSA: Calanus finmarchicus comp4952551_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.0466 bits (92), Expect = 7.369e-5
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:   10 KTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKH 52
            K    LE Y YN+K+  E ++L+GKLS EDK+T+ D ++ V+ 
Sbjct:  100 KAKNGLEGYVYNIKNQCEDEKLKGKLSDEDKKTLLDKVNEVQE 228
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592857919|gb|GAXK01099643.1| (TSA: Calanus finmarchicus comp2341041_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 1.450e-3
Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDE-LRGKLSQEDKETVKDNI-STVKHVGGN 56
            LESY YN+K+T+  +E ++ KL+ EDKET++D + ST + +  N
Sbjct:  135 LESYIYNIKNTINDEEKIKDKLTDEDKETLEDLVKSTTEWIDEN 266
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592931672|gb|GAXK01026881.1| (TSA: Calanus finmarchicus comp18245_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 8.449e-3
Identity = 12/25 (48.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQED 39
            LESYC+N+K+T+E ++++ K+S++D
Sbjct:  383 LESYCFNMKTTIEDEKVKDKISEDD 457
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592931673|gb|GAXK01026880.1| (TSA: Calanus finmarchicus comp18245_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 1.239e-2
Identity = 12/25 (48.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQED 39
            LESYC+N+K+T+E ++++ K+S++D
Sbjct:  383 LESYCFNMKTTIEDEKVKDKISEDD 457
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592931674|gb|GAXK01026879.1| (TSA: Calanus finmarchicus comp18245_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 1.240e-2
Identity = 12/25 (48.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQED 39
            LESYC+N+K+T+E ++++ K+S++D
Sbjct:  383 LESYCFNMKTTIEDEKVKDKISEDD 457
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592785895|gb|GAXK01168673.1| (TSA: Calanus finmarchicus comp613_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.8834 bits (76), Expect = 2.799e-2
Identity = 12/31 (38.71%), Postives = 26/31 (83.87%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            LESYC+N+K+T++ ++++ K+S++D + + D
Sbjct:  116 LESYCFNMKTTLDDEKVKDKISEDDMKKITD 208
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592899057|gb|GAXK01059318.1| (TSA: Calanus finmarchicus comp6746799_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.7278 bits (73), Expect = 5.321e-2
Identity = 15/34 (44.12%), Postives = 24/34 (70.59%), Query Frame = 0 
Query:   14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKDNI 47
            +LE+Y Y+LK+T+  D++ GKL + DK T+   I
Sbjct:  203 SLENYAYSLKNTMSDDKVAGKLEESDKTTLSAKI 304
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592863834|gb|GAXK01093728.1| (TSA: Calanus finmarchicus comp6985163_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.3426 bits (72), Expect = 6.939e-2
Identity = 20/50 (40.00%), Postives = 29/50 (58.00%), Query Frame = 0 
Query:    3 KSTREGRKTNRNLESYCYNLKSTVEKDE--LRGKLSQEDKETVKDNISTV 50
            K  +E       LESY YNLK+T++ DE  +  KLS +DKE ++  I+  
Sbjct:  228 KKVKERIDARNGLESYLYNLKNTLDDDEKGVADKLSADDKEEMESMINEA 377
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BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Match: EMLSAP00000001096 (pep:novel supercontig:LSalAtl2s:LSalAtl2s117:833403:833977:-1 gene:EMLSAG00000001096 transcript:EMLSAT00000001096 description:"snap-LSalAtl2s117-processed-gene-8.13")

HSP 1 Score: 187.963 bits (476), Expect = 6.230e-63
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 
Query:    1 MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF 90
            MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF
Sbjct:    1 MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF 90
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BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Match: EMLSAP00000011625 (pep:novel supercontig:LSalAtl2s:LSalAtl2s805:197005:264411:-1 gene:EMLSAG00000011625 transcript:EMLSAT00000011625 description:"maker-LSalAtl2s805-augustus-gene-2.13")

HSP 1 Score: 56.225 bits (134), Expect = 1.583e-10
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQEDKETVK 44
            LESYC+NLKSTVEKDE +GKLSQED ETVK
Sbjct:   94 LESYCFNLKSTVEKDEFKGKLSQEDIETVK 123
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001096 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-5.177e-552.63symbol:hsp70.3 "heat shock cognate 70-kd protein, ... [more]
-1.319e-458.06symbol:hspa8 "heat shock protein 8" species:7955 "... [more]
-1.364e-450.00symbol:hsp70l "heat shock cognate 70-kd protein, l... [more]
-1.373e-441.67symbol:HSPA2 "Heat shock-related 70 kDa protein 2"... [more]
-1.773e-440.00symbol:HSPA8 "Heat shock cognate 71 kDa protein" s... [more]
-1.872e-446.67symbol:hsc70 "heat shock cognate 70" species:7955 ... [more]
-3.138e-439.58symbol:HSPA2 "Uncharacterized protein" species:982... [more]
-3.339e-456.25symbol:P08106 "Heat shock 70 kDa protein" species:... [more]
-3.367e-439.58symbol:Hspa2 "Heat shock-related 70 kDa protein 2"... [more]
-3.367e-439.58symbol:Hspa2 "heat shock protein 2" species:10116 ... [more]

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BLAST of EMLSAG00000001096 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 17
Match NameE-valueIdentityDescription
gi|592938432|gb|GAXK01020121.1|2.083e-553.13TSA: Calanus finmarchicus comp13797_c0_seq2 transc... [more]
gi|592938433|gb|GAXK01020120.1|2.108e-553.13TSA: Calanus finmarchicus comp13797_c0_seq1 transc... [more]
gi|592935542|gb|GAXK01023011.1|7.369e-544.19TSA: Calanus finmarchicus comp4952551_c0_seq1 tran... [more]
gi|592857919|gb|GAXK01099643.1|1.450e-345.45TSA: Calanus finmarchicus comp2341041_c0_seq1 tran... [more]
gi|592931672|gb|GAXK01026881.1|8.449e-348.00TSA: Calanus finmarchicus comp18245_c1_seq3 transc... [more]
gi|592931673|gb|GAXK01026880.1|1.239e-248.00TSA: Calanus finmarchicus comp18245_c1_seq2 transc... [more]
gi|592931674|gb|GAXK01026879.1|1.240e-248.00TSA: Calanus finmarchicus comp18245_c1_seq1 transc... [more]
gi|592785895|gb|GAXK01168673.1|2.799e-238.71TSA: Calanus finmarchicus comp613_c0_seq1 transcri... [more]
gi|592899057|gb|GAXK01059318.1|5.321e-244.12TSA: Calanus finmarchicus comp6746799_c0_seq1 tran... [more]
gi|592863834|gb|GAXK01093728.1|6.939e-240.00TSA: Calanus finmarchicus comp6985163_c0_seq1 tran... [more]

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BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000010966.230e-63100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s117:83340... [more]
EMLSAP000000116251.583e-1086.67pep:novel supercontig:LSalAtl2s:LSalAtl2s805:19700... [more]
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BLAST of EMLSAG00000001096 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001096 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001096 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001096 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s117supercontigLSalAtl2s117:833403..833977 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap-LSalAtl2s117-processed-gene-8.13
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001096 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001096EMLSAT00000001096-696943Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s117:833403..833977-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001096-683862 ID=EMLSAG00000001096-683862|Name=EMLSAG00000001096|organism=Lepeophtheirus salmonis|type=gene|length=575bp|location=Sequence derived from alignment at LSalAtl2s117:833403..833977- (Lepeophtheirus salmonis)
ATGCTGAAGAGCACAAGGGAAGGGCGGAAAACAAACAGAAATCTTGAGTC
TTATTGCTACAACTTGAAGTCAACAGTGGAAAAGGATGAGTTGAGGGGAA
AGCTATCTCAAGAGGATAAAGAGACAGTCAAGGACAAGTGTGAAGAGACT
ATCAAATGGATGGATACTTAATCAAACTGCAGTAAAGAATGAATAGTTAT
ACAAAAAAAAGTTGAGGCTTTAAGGAATCCCTTATTTTTGTTCCTCCAAA
CACTTTTTTATTCAGTCCATAAAATGTTTTTTACTCTTAAAATAAACTTA
GTATTTAAATTATAGCCCGCTCTTTTCTTTGTCCTTGGGTAATGTTACAA
AATTACGAAGGGTTCAAATAATTATTTTTTCCACAGTAGGTGCTCCATTA
GTTTTAATTGTTTATCGATTAATAATCTATGTTTGATAGCATCTCCACTG
TCAAGCATGTGGGAGGAAACATTATCTTTTGGGGATGTCTTCCAACTAAA
AGAAAGGACAACTCATCTGGATCAAAGGGCACTGAAATGTGTATCGTAAT
GGATTCTCCAGCTCCATACTTCTGA
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