EMLSAG00000001105, EMLSAG00000001105-683871 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592791099|gb|GAXK01163469.1| (TSA: Calanus finmarchicus comp218561_c2_seq9 transcribed RNA sequence) HSP 1 Score: 44.2838 bits (103), Expect = 9.542e-4 Identity = 26/94 (27.66%), Postives = 48/94 (51.06%), Query Frame = 0 Query: 212 ENNELLRHPLLGVYLSKKWKDF-KLIYYLGFIFQIVAALCVTGYALVR--------KNDDDTGMYSKIWK-GFRYVGIILTSIRGFYQICETVR 295 + +LLRHPL L KKWK + ++Y F+ ++ + +TGY L + K +D++G+ S W+ FR +I ++ ++ + R Sbjct: 1167 KQKQLLRHPLCLALLRKKWKRLGRYVFYSQFLLYVLFLISITGYILFKLNTKSFPNKENDNSGITSDPWENAFRSAVLITVALNVVIELTQIFR 1448
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592791104|gb|GAXK01163464.1| (TSA: Calanus finmarchicus comp218561_c2_seq4 transcribed RNA sequence) HSP 1 Score: 44.2838 bits (103), Expect = 1.013e-3 Identity = 26/94 (27.66%), Postives = 48/94 (51.06%), Query Frame = 0 Query: 212 ENNELLRHPLLGVYLSKKWKDF-KLIYYLGFIFQIVAALCVTGYALVR--------KNDDDTGMYSKIWK-GFRYVGIILTSIRGFYQICETVR 295 + +LLRHPL L KKWK + ++Y F+ ++ + +TGY L + K +D++G+ S W+ FR +I ++ ++ + R Sbjct: 1167 KQKQLLRHPLCLALLRKKWKRLGRYVFYSQFLLYVLFLISITGYILFKLNTKSFPNKENDNSGITSDPWENAFRSAVLITVALNVVIELTQIFR 1448
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592791106|gb|GAXK01163462.1| (TSA: Calanus finmarchicus comp218561_c2_seq2 transcribed RNA sequence) HSP 1 Score: 44.2838 bits (103), Expect = 1.061e-3 Identity = 26/94 (27.66%), Postives = 48/94 (51.06%), Query Frame = 0 Query: 212 ENNELLRHPLLGVYLSKKWKDF-KLIYYLGFIFQIVAALCVTGYALVR--------KNDDDTGMYSKIWK-GFRYVGIILTSIRGFYQICETVR 295 + +LLRHPL L KKWK + ++Y F+ ++ + +TGY L + K +D++G+ S W+ FR +I ++ ++ + R Sbjct: 1167 KQKQLLRHPLCLALLRKKWKRLGRYVFYSQFLLYVLFLISITGYILFKLNTKSFPNKENDNSGITSDPWENAFRSAVLITVALNVVIELTQIFR 1448
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592791097|gb|GAXK01163471.1| (TSA: Calanus finmarchicus comp218561_c2_seq11 transcribed RNA sequence) HSP 1 Score: 43.5134 bits (101), Expect = 1.482e-3 Identity = 26/98 (26.53%), Postives = 48/98 (48.98%), Query Frame = 0 Query: 208 IAASENNELLRHPLLGVYLSKKWKDF-KLIYYLGFIFQIVAALCVTGYALVR--------KNDDDTGMYSKIWK-GFRYVGIILTSIRGFYQICETVR 295 + + LLRHPL L KKWK + ++Y F+ ++ + +TGY L + K +D++G+ S W+ FR +I ++ ++ + R Sbjct: 1167 MVEEKQKRLLRHPLCLALLRKKWKRLGRYVFYSQFLLYVLFLISITGYILFKLNTKSFPNKENDNSGITSDPWENAFRSAVLITVALNVVIELTQIFR 1460
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592804701|gb|GAXK01149867.1| (TSA: Calanus finmarchicus comp1261754_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 1.140e-2 Identity = 50/213 (23.47%), Postives = 91/213 (42.72%), Query Frame = 0 Query: 52 HNCNIILEQSNQGEKIFRDAIVEGNLKNVNDFVNETCSVAVLLRPLRGKSECEEDDG--------QLFHPFDLAIQFEQFKILRTLIDHIIRETGVEIFIEILRTTKIQELDVVFMDLIVRYPVAAHALMNSFVSYVKLNGHPVFKEALQLNPQLLSNIKVLKKIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGF-----IFQIVAALCV 251 H + L + ++ AI EGNLK V + + E + + + S D ++ + FDLA E+ IL+ L+ H + E+ L TT+ +F +++ A L+N V V N F ++++ Q SN ++ + + + EL HP++ KW++ + I +L F +F I+ +L V Sbjct: 680 HMSGLELSEPEDPVRMMIKAIHEGNLKTVENILEENTHLLMAELNMEKLSFLTTDCSAVASLSIMKVTNLFDLAASCERKVILKHLVSHGLTSHREEME-NFLMTTEFSYPGEIFEEVVKEDSKVAKNLLNYCVDTVSENTEDTF---IKIDLQKFSNPNAIEALLSDGHRELFFHPVVEAQTCLKWQNTRTI-FLSFLTWNILFTILLSLLV 1303
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592804698|gb|GAXK01149870.1| (TSA: Calanus finmarchicus comp1261754_c0_seq4 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 1.180e-2 Identity = 51/215 (23.72%), Postives = 95/215 (44.19%), Query Frame = 0 Query: 52 HNCNIILEQSNQGEKIFRDAIVEGNLKNVNDFVNETCSVAVLLRPLRGK------SECEEDDG----QLFHPFDLAIQFEQFKILRTLIDHIIRETGVEIFIEILRTTKIQELDVVFMDLIVRYPVAAHALMNSFVSYVKLNGHPVFKEALQLNPQLLSNIKVLKKIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGF-----IFQIVAALCV 251 H + L + ++ AI EGNLK V + + E + +L+ L + ++C ++ + FDLA E+ IL+ L+ H + E+ L TT+ +F +++ A L+N V V N F ++++ Q SN ++ + + + EL HP++ KW++ + I +L F +F I+ +L V Sbjct: 260 HMSGLELSEPEDPVRMMIKAIHEGNLKTVENILEE--NTHLLMAELNMEKLSFLTTDCSAVASLSIMKVTNLFDLAASCERKVILKHLVSHGLTSHREEME-NFLMTTEFSYPGEIFEEVVKEDSKVAKNLLNYCVDTVSENTEDTF---IKIDLQKFSNPNAIEALLSDGHRELFFHPVVEAQTCLKWQNTRTI-FLSFLTWNILFTILLSLLV 883
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592804697|gb|GAXK01149871.1| (TSA: Calanus finmarchicus comp1261754_c0_seq5 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 1.256e-2 Identity = 51/215 (23.72%), Postives = 95/215 (44.19%), Query Frame = 0 Query: 52 HNCNIILEQSNQGEKIFRDAIVEGNLKNVNDFVNETCSVAVLLRPLRGK------SECEEDDG----QLFHPFDLAIQFEQFKILRTLIDHIIRETGVEIFIEILRTTKIQELDVVFMDLIVRYPVAAHALMNSFVSYVKLNGHPVFKEALQLNPQLLSNIKVLKKIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGF-----IFQIVAALCV 251 H + L + ++ AI EGNLK V + + E + +L+ L + ++C ++ + FDLA E+ IL+ L+ H + E+ L TT+ +F +++ A L+N V V N F ++++ Q SN ++ + + + EL HP++ KW++ + I +L F +F I+ +L V Sbjct: 231 HMSGLELSEPEDPVRMMIKAIHEGNLKTVENILEE--NTHLLMAELNMEKLSFLTTDCSAVASLSIMKVTNLFDLAASCERKVILKHLVSHGLTSHREEME-NFLMTTEFSYPGEIFEEVVKEDSKVAKNLLNYCVDTVSENTEDTF---IKIDLQKFSNPNAIEALLSDGHRELFFHPVVEAQTCLKWQNTRTI-FLSFLTWNILFTILLSLLV 854
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592853911|gb|GAXK01103633.1| (TSA: Calanus finmarchicus comp166773_c4_seq2 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 1.271e-2 Identity = 40/157 (25.48%), Postives = 64/157 (40.76%), Query Frame = 0 Query: 212 ENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCVTGYALVRKND-DDTGMYSKI-------------WKGFRYVGIILTSIRGFYQICETVRSIIQHQRPLFRPLLLIKEGIFLGFVFAGLLDEGNTAMIYRGRSCTISWVRLFVSISTIP 354 E+ LL HP + +L KW+ + +Y +F ++ A +T Y LV + DDT + S W F V +I+ ++R +QI + R I L L+I L F+ ++ E G +SWV + I P Sbjct: 1598 EHRYLLSHPTITSFLWMKWRKIRPYFYFNVLFYLIFASLLTAYVLVLNIEIDDTKIISDSDMKKETAETTGLKWATF--VFLIIFTLRELFQISVSYRRYIFSIENLMEVALII-----LTFILMFVVSEPVAIKHVSGVIILLSWVEAVLLIGGHP 2047
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592853912|gb|GAXK01103632.1| (TSA: Calanus finmarchicus comp166773_c4_seq1 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 1.275e-2 Identity = 40/157 (25.48%), Postives = 64/157 (40.76%), Query Frame = 0 Query: 212 ENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCVTGYALVRKND-DDTGMYSKI-------------WKGFRYVGIILTSIRGFYQICETVRSIIQHQRPLFRPLLLIKEGIFLGFVFAGLLDEGNTAMIYRGRSCTISWVRLFVSISTIP 354 E+ LL HP + +L KW+ + +Y +F ++ A +T Y LV + DDT + S W F V +I+ ++R +QI + R I L L+I L F+ ++ E G +SWV + I P Sbjct: 1598 EHRYLLSHPTITSFLWMKWRKIRPYFYFNVLFYLIFASLLTAYVLVLNIEIDDTKIISDSDMKKETAETTGLKWATF--VFLIIFTLRELFQISVSYRRYIFSIENLMEVALII-----LTFILMFVVSEPVAIKHVSGVIILLSWVEAVLLIGGHP 2047
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Match: gi|592804696|gb|GAXK01149872.1| (TSA: Calanus finmarchicus comp1261754_c0_seq6 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 1.948e-2 Identity = 47/201 (23.38%), Postives = 89/201 (44.28%), Query Frame = 0 Query: 52 HNCNIILEQSNQGEKIFRDAIVEGNLKNVNDFVNETCSVAVLLRPLRGK------SECEEDDG----QLFHPFDLAIQFEQFKILRTLIDHIIRETGVEIFIEILRTTKIQELDVVFMDLIVRYPVAAHALMNSFVSYVKLNGHPVFKEALQLNPQLLSNIKVLKKIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFI 242 H + L + ++ AI EGNLK V + + E + +L+ L + ++C ++ + FDLA E+ IL+ L+ H + E+ L TT+ +F +++ A L+N V V N F ++++ Q SN ++ + + + EL HP++ KW++ + I +L F+ Sbjct: 156 HMSGLELSEPEDPVRMMIKAIHEGNLKTVENILEE--NTHLLMAELNMEKLSFLTTDCSAVASLSIMKVTNLFDLAASCERKVILKHLVSHGLTSHREEME-NFLMTTEFSYPGEIFEEVVKEDSKVAKNLLNYCVDTVSENTEDTF---IKIDLQKFSNPNAIEALLSDGHRELFFHPVVEAQTCLKWQNTRTI-FLSFL 737
BLAST of EMLSAG00000001105 vs. L. salmonis peptides
Match: EMLSAP00000001105 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1185:44264:52957:1 gene:EMLSAG00000001105 transcript:EMLSAT00000001105 description:"maker-LSalAtl2s1185-augustus-gene-0.13") HSP 1 Score: 1146.34 bits (2964), Expect = 0.000e+0 Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0 Query: 1 MKKPWTNRYSVNNHDYSNIRTTEDDETIYLEPTSSIYASIKPIKERLPQERHNCNIILEQSNQGEKIFRDAIVEGNLKNVNDFVNETCSVAVLLRPLRGKSECEEDDGQLFHPFDLAIQFEQFKILRTLIDHIIRETGVEIFIEILRTTKIQELDVVFMDLIVRYPVAAHALMNSFVSYVKLNGHPVFKEALQLNPQLLSNIKVLKKIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCVTGYALVRKNDDDTGMYSKIWKGFRYVGIILTSIRGFYQICETVRSIIQHQRPLFRPLLLIKEGIFLGFVFAGLLDEGNTAMIYRGRSCTISWVRLFVSISTIPDQRCLYAYAFKRIIVIAFFKAGLGSGIFFPLIGFILGAYIMSEDGTSFSGESLGVLVIFAIFGILVVTYLVGLSVAKVREDVLSIRGEDYIKKIMTLTVYKYQKLIFFWLKILTFLRKYFSSSSSTYIILPKQFEDENAPKKGVFSFCQTTDTPIYNKINENESLDYSNLQLTKYRTLLQTIESIPHQNFPNESGYTNLYWNNR 558 MKKPWTNRYSVNNHDYSNIRTTEDDETIYLEPTSSIYASIKPIKERLPQERHNCNIILEQSNQGEKIFRDAIVEGNLKNVNDFVNETCSVAVLLRPLRGKSECEEDDGQLFHPFDLAIQFEQFKILRTLIDHIIRETGVEIFIEILRTTKIQELDVVFMDLIVRYPVAAHALMNSFVSYVKLNGHPVFKEALQLNPQLLSNIKVLKKIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCVTGYALVRKNDDDTGMYSKIWKGFRYVGIILTSIRGFYQICETVRSIIQHQRPLFRPLLLIKEGIFLGFVFAGLLDEGNTAMIYRGRSCTISWVRLFVSISTIPDQRCLYAYAFKRIIVIAFFKAGLGSGIFFPLIGFILGAYIMSEDGTSFSGESLGVLVIFAIFGILVVTYLVGLSVAKVREDVLSIRGEDYIKKIMTLTVYKYQKLIFFWLKILTFLRKYFSSSSSTYIILPKQFEDENAPKKGVFSFCQTTDTPIYNKINENESLDYSNLQLTKYRTLLQTIESIPHQNFPNESGYTNLYWNNR Sbjct: 1 MKKPWTNRYSVNNHDYSNIRTTEDDETIYLEPTSSIYASIKPIKERLPQERHNCNIILEQSNQGEKIFRDAIVEGNLKNVNDFVNETCSVAVLLRPLRGKSECEEDDGQLFHPFDLAIQFEQFKILRTLIDHIIRETGVEIFIEILRTTKIQELDVVFMDLIVRYPVAAHALMNSFVSYVKLNGHPVFKEALQLNPQLLSNIKVLKKIAASENNELLRHPLLGVYLSKKWKDFKLIYYLGFIFQIVAALCVTGYALVRKNDDDTGMYSKIWKGFRYVGIILTSIRGFYQICETVRSIIQHQRPLFRPLLLIKEGIFLGFVFAGLLDEGNTAMIYRGRSCTISWVRLFVSISTIPDQRCLYAYAFKRIIVIAFFKAGLGSGIFFPLIGFILGAYIMSEDGTSFSGESLGVLVIFAIFGILVVTYLVGLSVAKVREDVLSIRGEDYIKKIMTLTVYKYQKLIFFWLKILTFLRKYFSSSSSTYIILPKQFEDENAPKKGVFSFCQTTDTPIYNKINENESLDYSNLQLTKYRTLLQTIESIPHQNFPNESGYTNLYWNNR 558 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001105 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001105 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000001105 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001105 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001105 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001105 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001105 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1185:44264..52957+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001105-683871 ID=EMLSAG00000001105-683871|Name=EMLSAG00000001105|organism=Lepeophtheirus salmonis|type=gene|length=8694bp|location=Sequence derived from alignment at LSalAtl2s1185:44264..52957+ (Lepeophtheirus salmonis)back to top Add to Basket
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