EMLSAG00000001126, EMLSAG00000001126-683892 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001126 vs. C. finmarchicus
Match: gi|592945551|gb|GAXK01013002.1| (TSA: Calanus finmarchicus comp680588_c0_seq1 transcribed RNA sequence) HSP 1 Score: 120.168 bits (300), Expect = 1.556e-29 Identity = 84/272 (30.88%), Postives = 131/272 (48.16%), Query Frame = 0 Query: 37 PSKEEQVEQFLAK------------GELSQSRNEIEQLRKRLEEQTGLESKISGMKSQMDAITETYDELHEKMHEIDKTRKNNLIFYGDREEIL----------------------------RLSKLLKGTNI-------------------------------YVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVVPLI----SQRYSGPNRL------YYNNMTQQVQSGMSMI-RSASVHSVGSH 226 P+KEEQ++ K +++ + EI L+ + TG E+++ MK++M++I++ Y +L EKMH++DK KNNL+FYG E L ++++L G I YV+EDLSRK REQR+EL+K+MR V+ ++P KKCV+R DKLYIDN+ + FD+ + VV I + S P R +++++ V + M+ R+ SVHSV H Sbjct: 926 PTKEEQMKALQDKVQAYEDKIDCLEKDVASHKEEISGLKSTVAGMTGFEAEVKEMKAKMESISDVYGDLQEKMHDVDKAIKNNLLFYGLVPEYLPEMASALTLKIHNLFKFNLGISRQLPLSKVARLTTGPEIRGCRPVLVAFTSFQDREEVLSKSKLLKTANIYVSEDLSRKTREQRHELSKHMRFVKRKAPHKKCVIRYDKLYIDNEPYTFDEIEGKVVRFIPTGGDRALSPPRRADSRQDRTESSLSRAVSTPQPMLARAESVHSVNGH 1741
BLAST of EMLSAG00000001126 vs. C. finmarchicus
Match: gi|592815644|gb|GAXK01138924.1| (TSA: Calanus finmarchicus comp2209825_c0_seq1 transcribed RNA sequence) HSP 1 Score: 97.8265 bits (242), Expect = 1.089e-21 Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 0 Query: 111 YGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSV 185 Y D+E+ILR +KLLKG NI+++ED SRK+RE R ELNK+M+ +RSR P ++ VLR DKLY+ NDVF ++D+ V Sbjct: 806 YNDKEDILRKAKLLKGVNIHISEDFSRKVREHRQELNKFMKEIRSRDPARRMVLRYDKLYMGNDVFFYNDKTGRV 1030
BLAST of EMLSAG00000001126 vs. C. finmarchicus
Match: gi|592928047|gb|GAXK01030440.1| (TSA: Calanus finmarchicus comp1888337_c0_seq1 transcribed RNA sequence) HSP 1 Score: 87.4261 bits (215), Expect = 1.587e-18 Identity = 52/179 (29.05%), Postives = 87/179 (48.60%), Query Frame = 0 Query: 66 LEEQTGLESKISGMKSQMDAITETYDELHEKMHEIDKTRKNNLIFYG----DREE----------ILRL--------------------------------------------SKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVV 186 + + LE I G+ +M+++T D++ EKM++ ++ ++NNLIFYG DRE +LRL SK+L + + VTEDLS++ RE R EL K+MRT++ ++P++ C L DKLY+D+ +++++D VV Sbjct: 449 MNKMVALEENIKGVNEKMESVTIQIDDIQEKMYDFEQNKRNNLIFYGVPGEDRESRDDLRIKISNLLRLHLNMRREIPISKASRMLTGPQVHGCRPTLVTFECFKDREDVLKNSKVLGRSQVTVTEDLSKRTRESRQELRKFMRTIKKKTPERHCFLEYDKLYVDHAIYVWNDILGQVV 985 HSP 2 Score: 43.8986 bits (102), Expect = 3.965e-4 Identity = 39/137 (28.47%), Postives = 69/137 (50.36%), Query Frame = 0 Query: 13 SGDIELNPGPPRRAPSTANSAPKGPSKEEQVEQFLAKGELSQSRNEIEQLRKRLEE-QTGLESKISGMKSQMD-AITET-------YD-ELHEKMHEIDKTRKNNLIFYGDREEILRLSKLLKGTNIYVTEDLSRKM 139 SGD+E NPGP R S +GPS +EQV + ++++ + + E L K + + Q +SK + +++D A+TE+ YD ++ E H ++ R + G+ E +L L++ +V DL K+ Sbjct: 1028 SGDVETNPGPTGR-----RSVAQGPSTDEQV--YTLNTQVAEIQTKCEGLEKGVNDIQNDFDSKFDSLSNKIDEALTESINVLKNDYDNKIGEVQHAVEGLRAESFSHLGETEA--KLDNLIREKIDHVNGDLLEKI 1411
BLAST of EMLSAG00000001126 vs. C. finmarchicus
Match: gi|592789490|gb|GAXK01165078.1| (TSA: Calanus finmarchicus comp1653113_c0_seq1 transcribed RNA sequence) HSP 1 Score: 85.1149 bits (209), Expect = 3.327e-18 Identity = 37/75 (49.33%), Postives = 57/75 (76.00%), Query Frame = 0 Query: 111 YGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSV 185 + DRE+ILR + +LKG+NI+VTED+SR++RE R+EL K+MR V+ +P + ++ DKLY+DN FI++D + V Sbjct: 437 FKDREDILRKANMLKGSNIHVTEDMSRRIRESRHELRKFMRDVKRGNPAARVAMQYDKLYVDNKCFIWNDVQGRV 661 HSP 2 Score: 38.891 bits (89), Expect = 1.272e-2 Identity = 15/39 (38.46%), Postives = 27/39 (69.23%), Query Frame = 0 Query: 74 SKISGMKSQMDAITETYDELHEKMHEIDKTRKNNLIFYG 112 S +G + Q+ + E D+++EKM++ + ++NNLIFYG Sbjct: 876 SSTAGTQGQIQELLERVDDINEKMYDFEVNKRNNLIFYG 992
BLAST of EMLSAG00000001126 vs. C. finmarchicus
Match: gi|592924478|gb|GAXK01033937.1| (TSA: Calanus finmarchicus comp2534510_c0_seq1 transcribed RNA sequence) HSP 1 Score: 83.9593 bits (206), Expect = 3.702e-18 Identity = 34/76 (44.74%), Postives = 55/76 (72.37%), Query Frame = 0 Query: 111 YGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVV 186 Y D+E++LR ++KG+ I+VTED+++K R+ R EL ++MR V+ +P CVL DKLY+DN VF+++D + V+ Sbjct: 379 YKDKEDVLRKGGMMKGSKIHVTEDMNKKTRDSRTELRRFMRAVKRNNPGASCVLHYDKLYVDNKVFVYNDVQGKVI 606
BLAST of EMLSAG00000001126 vs. C. finmarchicus
Match: gi|592802360|gb|GAXK01152208.1| (TSA: Calanus finmarchicus comp2623389_c0_seq1 transcribed RNA sequence) HSP 1 Score: 85.8853 bits (211), Expect = 3.768e-18 Identity = 34/76 (44.74%), Postives = 58/76 (76.32%), Query Frame = 0 Query: 111 YGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVV 186 + DREE+LR +LKG+NI++ ED+S+++RE R+EL KYMR ++ +P+ C ++ DKLY++N +++F+D + VV Sbjct: 855 FKDREEVLRKGNMLKGSNIHIGEDMSKRIRESRSELRKYMRKIKKANPEATCFMQYDKLYVNNKIYVFNDLQGRVV 1082
BLAST of EMLSAG00000001126 vs. C. finmarchicus
Match: gi|592797932|gb|GAXK01156636.1| (TSA: Calanus finmarchicus comp3729714_c0_seq1 transcribed RNA sequence) HSP 1 Score: 82.4185 bits (202), Expect = 4.399e-18 Identity = 39/75 (52.00%), Postives = 53/75 (70.67%), Query Frame = 0 Query: 111 YGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSV 185 + DREE+L+ SK +K I VTEDLS++ RE R EL K+MR V+ +P+K+C L+ DKLYID VFIF + +V Sbjct: 17 FKDREEVLKNSKFIKKPTISVTEDLSKRTRESRQELRKFMRHVKRINPEKRCFLQYDKLYIDGKVFIFSEASGAV 241
BLAST of EMLSAG00000001126 vs. C. finmarchicus
Match: gi|592888469|gb|GAXK01069906.1| (TSA: Calanus finmarchicus comp1222585_c0_seq1 transcribed RNA sequence) HSP 1 Score: 85.1149 bits (209), Expect = 1.083e-17 Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = 0 Query: 99 EIDKTRKNNLIF--YGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVV 186 E+ TR + F + DR+E+LR +++LK NI+V EDLS++ RE R EL K+MR VR +P+K C L+ DKLYID+ +F++++ VV Sbjct: 523 EVRGTRPVLVTFESFKDRDEVLRKARMLKKANIHVEEDLSKRTRENRTELRKFMRQVRKANPEKSCFLQYDKLYIDSKIFVYNEVLGQVV 792 HSP 2 Score: 45.0542 bits (105), Expect = 1.659e-4 Identity = 31/98 (31.63%), Postives = 50/98 (51.02%), Query Frame = 0 Query: 10 LLLSGDIELNPGPPRRAPSTANSAPKGPSKEEQVEQFLAKGELSQSRNEIEQLRKRLEEQTGLESKISGMKSQMDAITETYD----ELHEKMHEIDKT 103 +LLSGDIE NPGPPRR+ A KGPS +E++ A + E+K+SG++ +++ E Y+ + +E++ I+KT Sbjct: 1450 ILLSGDIESNPGPPRRS-----IAEKGPSADEKLSSLEAT-------------------ISNYEAKVSGLEHEIETQKEDYEKKILDFNERLEIIEKT 1671
BLAST of EMLSAG00000001126 vs. C. finmarchicus
Match: gi|592758717|gb|GAXK01195696.1| (TSA: Calanus finmarchicus comp2661962_c0_seq2 transcribed RNA sequence) HSP 1 Score: 80.8777 bits (198), Expect = 1.704e-17 Identity = 35/76 (46.05%), Postives = 56/76 (73.68%), Query Frame = 0 Query: 111 YGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVV 186 + DRE++L+ SK L+ T+I VTEDLS++ RE R EL K+MRTV+ +P+++C L D+LY+D +++++D VV Sbjct: 373 FKDREDVLKNSKTLQRTHITVTEDLSKRTRESRQELRKFMRTVKKTNPERRCFLEYDRLYVDQKIYVWNDIAGQVV 600
BLAST of EMLSAG00000001126 vs. C. finmarchicus
Match: gi|592798080|gb|GAXK01156488.1| (TSA: Calanus finmarchicus comp3538698_c0_seq1 transcribed RNA sequence) HSP 1 Score: 83.5741 bits (205), Expect = 3.050e-17 Identity = 36/79 (45.57%), Postives = 58/79 (73.42%), Query Frame = 0 Query: 111 YGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVVPLI 189 Y D+E+ILR + LL+G+NI+VTED+++K RE R EL ++MR+V+ +P C L DKL++DN V++++D + VV + Sbjct: 379 YKDKEDILRKAGLLRGSNIHVTEDMNKKTRESRTELRRFMRSVKRNNPAVNCTLNYDKLFMDNKVYVWNDIQGKVVEQV 615
BLAST of EMLSAG00000001126 vs. L. salmonis peptides
Match: EMLSAP00000001126 (pep:novel supercontig:LSalAtl2s:LSalAtl2s118:232763:291174:1 gene:EMLSAG00000001126 transcript:EMLSAT00000001126 description:"maker-LSalAtl2s118-snap-gene-3.38") HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0 Query: 1 MKRYYLWFLLLLSGDIELNPGPPRRAPSTANSAPKGPSKEEQVEQFLAKGELSQSRNEIEQLRKRLEEQTGLESKISGMKSQMDAITETYDELHEKMHEIDKTRKNNLIFYGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVVPLISQRYSGPNRLYYNNMTQQVQSGMSMIRSASVHSVGSHADDKEHDLPREKPDLKVNGRATSPAVESPSKDSMPTIDENIK 268 MKRYYLWFLLLLSGDIELNPGPPRRAPSTANSAPKGPSKEEQVEQFLAKGELSQSRNEIEQLRKRLEEQTGLESKISGMKSQMDAITETYDELHEKMHEIDKTRKNNLIFYGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVVPLISQRYSGPNRLYYNNMTQQVQSGMSMIRSASVHSVGSHADDKEHDLPREKPDLKVNGRATSPAVESPSKDSMPTIDENIK Sbjct: 1 MKRYYLWFLLLLSGDIELNPGPPRRAPSTANSAPKGPSKEEQVEQFLAKGELSQSRNEIEQLRKRLEEQTGLESKISGMKSQMDAITETYDELHEKMHEIDKTRKNNLIFYGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVVPLISQRYSGPNRLYYNNMTQQVQSGMSMIRSASVHSVGSHADDKEHDLPREKPDLKVNGRATSPAVESPSKDSMPTIDENIK 268
BLAST of EMLSAG00000001126 vs. L. salmonis peptides
Match: EMLSAP00000010242 (pep:novel supercontig:LSalAtl2s:LSalAtl2s67:605805:637353:-1 gene:EMLSAG00000010242 transcript:EMLSAT00000010242 description:"maker-LSalAtl2s67-augustus-gene-6.7") HSP 1 Score: 96.6709 bits (239), Expect = 1.498e-22 Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 0 Query: 108 LIFYGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVVPLISQRYSGPNRLY 200 L+ Y D+EE+LR S+LLKGTNIY++ED SRK+RE R+EL K+++ VR+R P ++ LR DKLY+ +DVF F+D N V + + S N + Sbjct: 223 LVNYRDKEELLRKSRLLKGTNIYLSEDFSRKVREHRHELIKFIKEVRTRDPARRMTLRYDKLYMGHDVFFFNDRTNRVEKMQTNLESSANSTF 315
BLAST of EMLSAG00000001126 vs. L. salmonis peptides
Match: EMLSAP00000006929 (pep:novel supercontig:LSalAtl2s:LSalAtl2s393:115311:134498:-1 gene:EMLSAG00000006929 transcript:EMLSAT00000006929 description:"maker-LSalAtl2s393-augustus-gene-1.20") HSP 1 Score: 80.8777 bits (198), Expect = 1.026e-17 Identity = 32/70 (45.71%), Postives = 55/70 (78.57%), Query Frame = 0 Query: 111 YGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDD 180 + D+E++LR KLL+G++IYV ED S+K++E R EL ++MR ++ R+P+ KC L+ DKL+I+ D++ ++D Sbjct: 216 WHDKEDVLRKGKLLRGSHIYVGEDFSKKVKEHRAELMRFMREIKRRNPKVKCSLKYDKLFINKDIYAYND 285
BLAST of EMLSAG00000001126 vs. nr
Match: gi|585667677|ref|XP_006817358.1| (PREDICTED: uncharacterized protein LOC102803378, partial [Saccoglossus kowalevskii]) HSP 1 Score: 57.7658 bits (138), Expect = 4.698e-7 Identity = 32/86 (37.21%), Postives = 53/86 (61.63%), Query Frame = 0 Query: 111 YGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVVPLISQRYSGP 196 Y R+E+LR ++ LKGT + ED + K+R+ R +L K++ V +R+ K + DK+ ID+ V+I+D+ ++ PL S YS P Sbjct: 53 YKQRDEVLRAAEKLKGTEFRIREDFTPKIRDLRRKLGKFV--VDARAEGKTVKVLYDKIKIDDTVYIYDEVMKNIKPLRSLNYSSP 136
BLAST of EMLSAG00000001126 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold335_size202896-snap-gene-1.20 (protein:Tk05625 transcript:maker-scaffold335_size202896-snap-gene-1.20-mRNA-1 annotation:"sporulation-specific protein 15-like") HSP 1 Score: 172.17 bits (435), Expect = 2.712e-51 Identity = 108/296 (36.49%), Postives = 152/296 (51.35%), Query Frame = 0 Query: 6 LWFLLLLSGDIELNPGPPRRAPSTANSAPKGPSKEEQVEQFLA------------KGELSQSRNEIEQLRKRLEEQTGLESKISGMKSQMDAITETYDELHE--------------------------------KMHEIDKTRKN---------------------------NLIFYGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVVPLISQRYSGPNRL---YYNNMTQQVQSGMSMIRSASVHSVGSHA 227 L LLL GDIE NPGPPRR PS A A K PS+E+++ + + + R+EI+ L+ ++ G+E K+ G+ ++MDAIT YD+LHE K+HE+ K + N + + DREE+LR + L+G+NIYVTEDLSRK+RE R+EL KY R VRS+SP KKC++RQDKL+IDN ++++D++K+ VVP R P+R+ Y NM ++ RS SVHSV A Sbjct: 49 LSILLLRCGDIESNPGPPRRQPSAAPGATKAPSQEDKLARLEEKVKEYEEKIVNLEKTVKSHRSEIDGLKDLVKNLDGMEDKLIGITTKMDAITGVYDDLHEKMHEIDKTRKNNLLFYGIKPDFLPEIQTQLEQKIHEMMKVNLHISREIPCTKISRMISGPQVRGCRPVLVNFVNWKDREEVLRKATFLRGSNIYVTEDLSRKVREHRHELQKYARQVRSKSPNKKCMIRQDKLFIDNHMYVYDEDKHDVVPF--ARPPSPHRVPSRNYTNMDNILR------RSTSVHSVNGEA 336
BLAST of EMLSAG00000001126 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold198_size266703-processed-gene-1.7 (protein:Tk12352 transcript:snap_masked-scaffold198_size266703-processed-gene-1.7-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_215456") HSP 1 Score: 87.8113 bits (216), Expect = 9.035e-20 Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 0 Query: 110 FYGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMRTVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSV 185 + D+EEILR + LLKGTN+Y+TED SRK+R R EL K+ R +R+ P KC L+ D+L +DND F+F+ + V Sbjct: 769 LFKDKEEILRKAHLLKGTNVYLTEDFSRKVRHAREELIKFARDIRAHCPTAKCSLQYDRLIVDNDAFLFNSTEGKV 844
BLAST of EMLSAG00000001126 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1166_size57906-snap-gene-0.6 (protein:Tk05907 transcript:maker-scaffold1166_size57906-snap-gene-0.6-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC102803158 partial") HSP 1 Score: 72.0182 bits (175), Expect = 1.790e-14 Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 0 Query: 111 YGDREEILRLSKLLKGTNIYVTEDLSRKMREQRNELNKYMR-----------TVRSRSPQKKCVLRQDKLYIDNDVFIFDDEKNSVVPLI-SQRYS 194 + DRE +LR SK LK +I VTEDLS++ RE R EL K++R V+ +P+K C L DKLYID+ +F++++ V+ +QRY Sbjct: 323 FKDRETVLRQSKTLKKASIDVTEDLSKRTRESRQELRKFLRKASQPLRRLQPKVKRGNPEKNCFLEYDKLYIDHKIFVYNEALGQVIEQAEAQRYG 418 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001126 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001126 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000001126 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000001126 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001126 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001126 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000001126 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 3
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s118:232763..291174+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001126-683892 ID=EMLSAG00000001126-683892|Name=EMLSAG00000001126|organism=Lepeophtheirus salmonis|type=gene|length=58412bp|location=Sequence derived from alignment at LSalAtl2s118:232763..291174+ (Lepeophtheirus salmonis)back to top Add to Basket
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