EMLSAG00000001148, EMLSAG00000001148-683914 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001148 vs. C. finmarchicus
Match: gi|592904524|gb|GAXK01053851.1| (TSA: Calanus finmarchicus comp258515_c2_seq5 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 2.857e+0 Identity = 12/30 (40.00%), Postives = 21/30 (70.00%), Query Frame = 0
Query: 71 IDYIRNLELEMNELNGSDQLSDMMNTDYHN 100
++YI +E +NE GSD++SD++ D H+
Sbjct: 17 VEYIDQIEPVINETEGSDEISDLVIDDGHS 106
BLAST of EMLSAG00000001148 vs. C. finmarchicus
Match: gi|592784039|gb|GAXK01170529.1| (TSA: Calanus finmarchicus comp175_c31_seq151 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 4.176e+0 Identity = 15/33 (45.45%), Postives = 16/33 (48.48%), Query Frame = 0
Query: 25 FVVFGLLLFLCKTEIISSFPILNEDDSSEPNLF 57
F +F L LF CK EI ILN D LF
Sbjct: 85 FDIFCLQLFFCKKEIYDKIKILNTKDVCRLALF 183
BLAST of EMLSAG00000001148 vs. C. finmarchicus
Match: gi|592784040|gb|GAXK01170528.1| (TSA: Calanus finmarchicus comp175_c31_seq150 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 4.176e+0 Identity = 15/33 (45.45%), Postives = 16/33 (48.48%), Query Frame = 0
Query: 25 FVVFGLLLFLCKTEIISSFPILNEDDSSEPNLF 57
F +F L LF CK EI ILN D LF
Sbjct: 85 FDIFCLQLFFCKKEIYDKIKILNTKDVCRLALF 183
BLAST of EMLSAG00000001148 vs. C. finmarchicus
Match: gi|592828632|gb|GAXK01128650.1| (TSA: Calanus finmarchicus comp1991090_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 5.143e+0 Identity = 12/29 (41.38%), Postives = 20/29 (68.97%), Query Frame = 0
Query: 85 NGSDQLSDMMNTDYHNIDKRRNGGKRSLF 113
G+ +LSD+++T Y ++DK RN +RS
Sbjct: 305 KGAKKLSDVLDTVYKDLDKTRNKYQRSFL 391
BLAST of EMLSAG00000001148 vs. C. finmarchicus
Match: gi|592784325|gb|GAXK01170243.1| (TSA: Calanus finmarchicus comp175_c19_seq14 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 6.690e+0 Identity = 15/33 (45.45%), Postives = 16/33 (48.48%), Query Frame = 0
Query: 25 FVVFGLLLFLCKTEIISSFPILNEDDSSEPNLF 57
F +F L LF CK EI ILN D LF
Sbjct: 6299 FDIFCLQLFFCKKEIYDKIKILNTKDVCRLALF 6397
BLAST of EMLSAG00000001148 vs. C. finmarchicus
Match: gi|592784327|gb|GAXK01170241.1| (TSA: Calanus finmarchicus comp175_c19_seq12 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 6.690e+0 Identity = 15/33 (45.45%), Postives = 16/33 (48.48%), Query Frame = 0
Query: 25 FVVFGLLLFLCKTEIISSFPILNEDDSSEPNLF 57
F +F L LF CK EI ILN D LF
Sbjct: 6323 FDIFCLQLFFCKKEIYDKIKILNTKDVCRLALF 6421
BLAST of EMLSAG00000001148 vs. C. finmarchicus
Match: gi|592784328|gb|GAXK01170240.1| (TSA: Calanus finmarchicus comp175_c19_seq11 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 6.691e+0 Identity = 15/33 (45.45%), Postives = 16/33 (48.48%), Query Frame = 0
Query: 25 FVVFGLLLFLCKTEIISSFPILNEDDSSEPNLF 57
F +F L LF CK EI ILN D LF
Sbjct: 6332 FDIFCLQLFFCKKEIYDKIKILNTKDVCRLALF 6430
BLAST of EMLSAG00000001148 vs. C. finmarchicus
Match: gi|592784329|gb|GAXK01170239.1| (TSA: Calanus finmarchicus comp175_c19_seq10 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 6.694e+0 Identity = 15/33 (45.45%), Postives = 16/33 (48.48%), Query Frame = 0
Query: 25 FVVFGLLLFLCKTEIISSFPILNEDDSSEPNLF 57
F +F L LF CK EI ILN D LF
Sbjct: 6456 FDIFCLQLFFCKKEIYDKIKILNTKDVCRLALF 6554
BLAST of EMLSAG00000001148 vs. C. finmarchicus
Match: gi|592784334|gb|GAXK01170234.1| (TSA: Calanus finmarchicus comp175_c19_seq5 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 6.697e+0 Identity = 15/33 (45.45%), Postives = 16/33 (48.48%), Query Frame = 0
Query: 25 FVVFGLLLFLCKTEIISSFPILNEDDSSEPNLF 57
F +F L LF CK EI ILN D LF
Sbjct: 6565 FDIFCLQLFFCKKEIYDKIKILNTKDVCRLALF 6663
BLAST of EMLSAG00000001148 vs. L. salmonis peptides
Match: EMLSAP00000001148 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1190:119180:160561:-1 gene:EMLSAG00000001148 transcript:EMLSAT00000001148 description:"maker-LSalAtl2s1190-snap-gene-0.32") HSP 1 Score: 271.552 bits (693), Expect = 1.922e-94 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query: 1 MRGSNHFIMFLNRLGAINNIIMNKFVVFGLLLFLCKTEIISSFPILNEDDSSEPNLFNSYENYKNYEKKVIDYIRNLELEMNELNGSDQLSDMMNTDYHNIDKRRNGGKRSLFKRNGKFIPITTLSSKLLNLPNFG 136
MRGSNHFIMFLNRLGAINNIIMNKFVVFGLLLFLCKTEIISSFPILNEDDSSEPNLFNSYENYKNYEKKVIDYIRNLELEMNELNGSDQLSDMMNTDYHNIDKRRNGGKRSLFKRNGKFIPITTLSSKLLNLPNFG
Sbjct: 1 MRGSNHFIMFLNRLGAINNIIMNKFVVFGLLLFLCKTEIISSFPILNEDDSSEPNLFNSYENYKNYEKKVIDYIRNLELEMNELNGSDQLSDMMNTDYHNIDKRRNGGKRSLFKRNGKFIPITTLSSKLLNLPNFG 136 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001148 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001148 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 9
BLAST of EMLSAG00000001148 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001148 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001148 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001148 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001148 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1190:119180..160561- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001148-683914 ID=EMLSAG00000001148-683914|Name=EMLSAG00000001148|organism=Lepeophtheirus salmonis|type=gene|length=41382bp|location=Sequence derived from alignment at LSalAtl2s1190:119180..160561- (Lepeophtheirus salmonis)back to top Add to Basket
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