EMLSAG00000001153, EMLSAG00000001153-683919 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001153
Unique NameEMLSAG00000001153-683919
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592893579|gb|GAXK01064796.1| (TSA: Calanus finmarchicus comp4336892_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 41.5874 bits (96), Expect = 1.593e-4
Identity = 24/105 (22.86%), Postives = 46/105 (43.81%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQL-----QTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            +  CL+T A+H+E++ +     F+   +      G P+++  D       ++KQ+     ++ +  ++ KV E   S +   W F  +   W N   E    IFK
Sbjct:   57 IICCLNTGAVHLELLHTYGAEAFLLRWKVFTCTRGDPKLVISDKGSQLQAASKQVDWTRKESPEQWEWEKV-EHATSAKGTRWHFVPAGCQWQNGLAESRIKIFK 368
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592893580|gb|GAXK01064795.1| (TSA: Calanus finmarchicus comp4336892_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 1.754e-4
Identity = 24/105 (22.86%), Postives = 46/105 (43.81%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQL-----QTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            +  CL+T A+H+E++ +     F+   +      G P+++  D       ++KQ+     ++ +  ++ KV E   S +   W F  +   W N   E    IFK
Sbjct:  109 IICCLNTGAVHLELLHTYGAEAFLLRWKVFTCTRGDPKLVISDKGSQLQAASKQVDWTRKESPEQWEWEKV-EHATSAKGTRWHFVPAGCQWQNGLAESRIKIFK 420
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592823516|gb|GAXK01131052.1| (TSA: Calanus finmarchicus comp3507114_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 39.6614 bits (91), Expect = 5.964e-4
Identity = 23/101 (22.77%), Postives = 47/101 (46.53%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQ-LQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            LF CL   A+ + ++    T +F+      +  YG+P + Y D   N V++ ++   T+ + D++++     S    +W+F  + + + N   E     FK
Sbjct:  417 LFVCLQVKAVKIYLVGGLHTEDFLLAWDSFVADYGQPMVAYSDRGSNLVSAAREGGDTVPDYDWDRIA--GCSQGKTDWQFHPAGSQFRNGAVEIFVKKFK 713
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592935729|gb|GAXK01022824.1| (TSA: Calanus finmarchicus comp1637438_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.0466 bits (92), Expect = 6.418e-4
Identity = 24/105 (22.86%), Postives = 52/105 (49.52%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQ---TLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            +A+F C  +SA+ + + +  S   F+Q   + +  + KP ++Y D     V +   L    + + +D+ K+  +      ++W F+++++ W N    R EA+ K
Sbjct: 1183 IAVFACSLSSAVKLYVCKDYSEEGFMQVWHQHVADWAKPAMVYSDRGSQLVAAAGGLDPGDSEEELDWAKLGRKTG----VKWTFTSAQSQWKNG---RAEALVK 1476
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592884735|gb|GAXK01073640.1| (TSA: Calanus finmarchicus comp3167281_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 38.5058 bits (88), Expect = 1.919e-3
Identity = 17/52 (32.69%), Postives = 26/52 (50.00%), Query Frame = 0 
Query:    2 ALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTS 53
            ALF CL+T A+ + +    ST +F+          GKP+ +Y D  RN   +
Sbjct: 2955 ALFCCLNTGALAIYVAAGNSTEKFLTAYSHYCSDRGKPKFVYSDRGRNLTKA 3110
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592880223|gb|GAXK01077678.1| (TSA: Calanus finmarchicus comp5163893_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 2.154e-3
Identity = 14/64 (21.88%), Postives = 30/64 (46.88%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFN 66
            LF CL   A+ + ++    T +F+      +  +G+P+I Y D   N   + ++    +  D++
Sbjct:  174 LFVCLQVKAVKIYLVGGLHTEDFLLAWDSFVADHGQPQIAYSDRGSNLTAAAREGGDTEVPDYD 365
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592917301|gb|GAXK01041074.1| (TSA: Calanus finmarchicus comp7409526_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.3502 bits (85), Expect = 2.757e-3
Identity = 17/70 (24.29%), Postives = 37/70 (52.86%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEEN 72
            L  CL+T A+ + I    ST +F+    +    +G+P  ++ D   N V + K++ T  + D++ +++ +
Sbjct:  301 LILCLNTKAVKLYIAAGYSTADFLMTFEQYPSDHGQPATVHSDRGSNLVCAAKEVDT-PDYDWDIIEKSS 507
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592868284|gb|GAXK01089278.1| (TSA: Calanus finmarchicus comp5307518_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 3.415e-3
Identity = 13/54 (24.07%), Postives = 29/54 (53.70%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQ 56
            LF CL   A+ + ++    T +F+ +    +  +G+P ++Y D   N V++ ++
Sbjct:  309 LFVCLQVKAVKIYLVGGLHTEDFLLSWDSFVADHGQPLVVYSDRGPNMVSAARE 470
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592800806|gb|GAXK01153762.1| (TSA: Calanus finmarchicus comp3388558_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 5.839e-3
Identity = 18/65 (27.69%), Postives = 32/65 (49.23%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDF 65
            +A+F CL++   H+E+IE + T   +  L     LYG P  +  D          ++Q L++ +F
Sbjct: 1011 VAVFACLYSRMTHLEVIEDKKTESILGALNTLGCLYGPPSCVTVDKDA------AEIQALRDSEF 1187
[Close]
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592858944|gb|GAXK01098618.1| (TSA: Calanus finmarchicus comp2801899_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 8.890e-3
Identity = 21/93 (22.58%), Postives = 44/93 (47.31%), Query Frame = 0 
Query:    6 CLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMD-FNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            C  T+A+ + I    S   F+Q  R+ +  +G+P+++Y D     V++   +      D  +  +    +G  ++W F+ +++ W N   E M
Sbjct:  579 CSVTAALKLYICRDYSEEGFLQAWRQHVCDWGEPDLVYSDRGTQLVSAAGGIDPADEEDELDWARIGRTTG--VKWVFTPAQSQWKNGRAESM 851
[Close]
BLAST of EMLSAG00000001153 vs. L. salmonis peptides
Match: EMLSAP00000001153 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1190:92088:92396:-1 gene:EMLSAG00000001153 transcript:EMLSAT00000001153 description:"snap_masked-LSalAtl2s1190-processed-gene-0.16")

HSP 1 Score: 214.927 bits (546), Expect = 4.030e-73
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK
Sbjct:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM71562.1| (Transposable element Tcb2 transposase, partial [Stegodyphus mimosarum])

HSP 1 Score: 57.7658 bits (138), Expect = 2.718e-10
Identity = 35/102 (34.31%), Postives = 51/102 (50.00%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQ----TLKNMDFNKVQEENY-SGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC  T A+H+E++ + S  +FI  LR+ I   G     Y DN++ F  + K LQ     +K  DF     +N+ + E   WKF    APW   F E +
Sbjct: 1485 IVLFTCAVTRALHLELVSNMSANKFILALRRFISRRGNCRTFYSDNAKTFRYAAKDLQYFYSIIKGQDF-----QNFLANEGFTWKFIVELAPWWGGFYESL 1581
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM74861.1| (hypothetical protein X975_18449, partial [Stegodyphus mimosarum])

HSP 1 Score: 55.8398 bits (133), Expect = 1.109e-9
Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIF 101
            LFTC    A+++E+IES S   FI  LR+ I   G   IIY DN  NFV +      L ++D+ ++ E + +   I+WKF+   A W   + ER++ + 
Sbjct:  351 LFTC----AVYLELIESLSINGFILGLRRFIARRGCSRIIYSDNGTNFVGTE---NLLGSIDWKEI-ECHSTTMRIQWKFNPPTASWWGGWCERLKKVL 441
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM61875.1| (Retrovirus-related Pol polyprotein from transposon 17.6, partial [Stegodyphus mimosarum])

HSP 1 Score: 55.0694 bits (131), Expect = 2.486e-9
Identity = 31/93 (33.33%), Postives = 49/93 (52.69%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQ-----LQTLKNMDFNKVQEENYSGEYIEWKFSTSEAP 88
            + LF C    A+H+E++E  ST+ F+  L++ I   GKP  IY D   NF  + K+     LQ  +N +     ++  S E I+WKF+   +P
Sbjct: 2142 VCLFVCFVVKAVHLEVVEDLSTKAFLSALKRFISRRGKPSEIYSDCGTNFKGAEKEIRKCFLQCKQNQEI----QDFLSLEEIKWKFNPPSSP 2230
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM63037.1| (hypothetical protein X975_02648, partial [Stegodyphus mimosarum])

HSP 1 Score: 53.9138 bits (128), Expect = 6.765e-9
Identity = 27/97 (27.84%), Postives = 50/97 (51.55%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC  T AIH+E+++  +T+E +   R+ +   G    +Y DN+R    +  +L+ +  +  +   ++ Y+   I WK+    A W   F ER+
Sbjct: 1368 ILLFTCATTRAIHLELVKGMTTQEILLAFRRFVSRRGLCSTVYSDNARTLKRAELELKQMWKVINHPEIKKFYASHGITWKYIVKRAAWWGGFYERL 1464
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM64358.1| (hypothetical protein X975_25070, partial [Stegodyphus mimosarum])

HSP 1 Score: 52.7582 bits (125), Expect = 1.109e-8
Identity = 28/71 (39.44%), Postives = 42/71 (59.15%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEE 71
            +A+FT     A+H+E+I+S S+  FIQ LR+ I   G+  +IY DN   F   N     LK +D+N++Q E
Sbjct:  213 IAIFTYAVYRAVHLELIQSVSSIAFIQTLRRFIARRGRISVIYSDNGAAFTRVN---SALKQLDWNEIQAE 280
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|EFA13346.1| (hypothetical protein TcasGA2_TC002325 [Tribolium castaneum])

HSP 1 Score: 53.1434 bits (126), Expect = 1.198e-8
Identity = 28/92 (30.43%), Postives = 46/92 (50.00%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQT----LKNMDFNKVQEENYSGEYIEWKFSTSEAP 88
            + LF C+   A+H+E++   ++  F+  L++ I   GKP+ I+ DN  NFV +  +L+     LK+        E  + E I W F    AP
Sbjct: 1309 VCLFVCMAVKAVHIEVVSDLTSEAFLACLKRFISRRGKPKDIFSDNGLNFVGAANELRELYVFLKSESTQNKILEFLTSEKISWHFIPPRAP 1400
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM56668.1| (hypothetical protein X975_17469, partial [Stegodyphus mimosarum])

HSP 1 Score: 48.521 bits (114), Expect = 7.992e-8
Identity = 20/61 (32.79%), Postives = 36/61 (59.02%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNM 63
            LF CL T A+H++ +   +T  F+  LR    + G P  IY +N  NF+ +N++L+ ++ +
Sbjct:   26 LFICLATKALHIKAVSDLTTDAFLAALRCFSAIRGAPHHIYSNNKTNFIGANRKLKEIQRL 86
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|EFA06508.1| (hypothetical protein TcasGA2_TC009407 [Tribolium castaneum])

HSP 1 Score: 50.447 bits (119), Expect = 1.076e-7
Identity = 26/88 (29.55%), Postives = 42/88 (47.73%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAP 88
            + +F C  T AIH+E++   ST  F+  LR+ +   G+   IY D   NFV + ++L        N+  +     E + W F+   AP
Sbjct:  174 ICVFLCFSTKAIHIELVSDLSTEAFLAALRRFVARRGRCSYIYSDCGTNFVGAYREL--------NRHMKSAAERERLRWHFNPPSAP 253
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM67093.1| (hypothetical protein X975_26725, partial [Stegodyphus mimosarum])

HSP 1 Score: 48.521 bits (114), Expect = 1.473e-7
Identity = 28/82 (34.15%), Postives = 45/82 (54.88%), Query Frame = 0 
Query:   21 STREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            ST  F+  LR+ I   G+  IIYCDN  NFV ++     L+++++ ++ ++  S   I+WKF+   A W     ER+  I K
Sbjct:    2 STNGFLLALRRFIARRGQSRIIYCDNGTNFVGAS---NVLRDLNWKQITDDT-SIPPIQWKFNPPNASW----WERLVGILK 75
[Close]
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM66923.1| (hypothetical protein X975_05448, partial [Stegodyphus mimosarum])

HSP 1 Score: 48.9062 bits (115), Expect = 2.361e-7
Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKV 68
            + LFT      +H+E++ S ST  FIQ  R+ I   G+P I+Y DN  NFV ++     LK +D+ KV
Sbjct:  109 VVLFTFAVYRCVHLELVTSVSTECFIQAFRRFIARRGRPSIVYSDNGTNFVGTS---ALLKKVDWVKV 173
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|748304337|gb|KIH42235.1| (integrase core domain protein [Ancylostoma duodenale])

HSP 1 Score: 81.2629 bits (199), Expect = 5.033e-17
Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQ-TLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC+ TSA+H+E++ + +  EF+  LR+ I   G P++I  DN+  F + N  LQ  + N D  K     ++   I WKF+T  +PW   F ER+  +FK
Sbjct:   40 ICLFTCMATSAVHLELVHNNTAFEFLLALRRFIARRGTPDLIISDNATTFTSGNDALQKVIYNKDTIKRLSSQFANRRITWKFNTPLSPWKGGFYERLVGLFK 142
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954377984|gb|KRY43651.1| (hypothetical protein T03_6895 [Trichinella britovi])

HSP 1 Score: 80.4925 bits (197), Expect = 1.077e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  111 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 207
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|597865463|gb|EYC14861.1| (hypothetical protein Y032_0039g49 [Ancylostoma ceylanicum])

HSP 1 Score: 80.4925 bits (197), Expect = 1.207e-15
Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQT-LKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC+ T A+H+E++ + +T EF+  LR+ I   G P++I  DN+  F + N  LQ  + N D  K     ++   I WKF+T  +PW   F ER+  +FK
Sbjct: 1317 ICLFTCMATRAVHLELVHNNTTYEFLLALRRFIARRGTPDLIISDNATTFTSGNDALQKIIYNKDTIKKLSAQFANRRITWKFNTPLSPWKGGFYERLVGLFK 1419
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954605939|gb|KRZ82006.1| (hypothetical protein T08_2963 [Trichinella sp. T8])

HSP 1 Score: 80.4925 bits (197), Expect = 1.354e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct: 1215 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1311
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954605949|gb|KRZ82011.1| (hypothetical protein T08_16631, partial [Trichinella sp. T8])

HSP 1 Score: 80.4925 bits (197), Expect = 1.354e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct: 1238 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1334
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954605947|gb|KRZ82010.1| (hypothetical protein T08_13270, partial [Trichinella sp. T8])

HSP 1 Score: 80.4925 bits (197), Expect = 1.354e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct: 1238 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1334
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|339257582|ref|XP_003369834.1| (conserved hypothetical protein [Trichinella spiralis] >gi|316962331|gb|EFV48605.1| conserved hypothetical protein [Trichinella spiralis])

HSP 1 Score: 80.1073 bits (196), Expect = 1.383e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  264 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 360
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954363910|gb|KRY30670.1| (hypothetical protein T03_16191, partial [Trichinella britovi])

HSP 1 Score: 78.5666 bits (192), Expect = 1.447e-15
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 0 
Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            LFTC+ + A+H+E +   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:   94 LFTCMASRAVHLEQVPEMTTARVMQALRRFIARRGRPEIIQSDNFRSFEAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 188
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BLAST of EMLSAG00000001153 vs. nr
Match: gi|954376516|gb|KRY42408.1| (hypothetical protein T01_3074 [Trichinella spiralis])

HSP 1 Score: 80.4925 bits (197), Expect = 1.450e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  489 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 585
[Close]
BLAST of EMLSAG00000001153 vs. nr
Match: gi|339233598|ref|XP_003381916.1| (putative integrase core domain protein [Trichinella spiralis] >gi|316979212|gb|EFV62034.1| putative integrase core domain protein [Trichinella spiralis])

HSP 1 Score: 80.4925 bits (197), Expect = 1.463e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  674 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 770
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001153 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001153 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 19
Match NameE-valueIdentityDescription
gi|592893579|gb|GAXK01064796.1|1.593e-422.86TSA: Calanus finmarchicus comp4336892_c0_seq2 tran... [more]
gi|592893580|gb|GAXK01064795.1|1.754e-422.86TSA: Calanus finmarchicus comp4336892_c0_seq1 tran... [more]
gi|592823516|gb|GAXK01131052.1|5.964e-422.77TSA: Calanus finmarchicus comp3507114_c0_seq1 tran... [more]
gi|592935729|gb|GAXK01022824.1|6.418e-422.86TSA: Calanus finmarchicus comp1637438_c0_seq1 tran... [more]
gi|592884735|gb|GAXK01073640.1|1.919e-332.69TSA: Calanus finmarchicus comp3167281_c0_seq1 tran... [more]
gi|592880223|gb|GAXK01077678.1|2.154e-321.88TSA: Calanus finmarchicus comp5163893_c0_seq1 tran... [more]
gi|592917301|gb|GAXK01041074.1|2.757e-324.29TSA: Calanus finmarchicus comp7409526_c0_seq1 tran... [more]
gi|592868284|gb|GAXK01089278.1|3.415e-324.07TSA: Calanus finmarchicus comp5307518_c0_seq1 tran... [more]
gi|592800806|gb|GAXK01153762.1|5.839e-327.69TSA: Calanus finmarchicus comp3388558_c0_seq1 tran... [more]
gi|592858944|gb|GAXK01098618.1|8.890e-322.58TSA: Calanus finmarchicus comp2801899_c0_seq1 tran... [more]

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BLAST of EMLSAG00000001153 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000011534.030e-73100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1190:9208... [more]
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BLAST of EMLSAG00000001153 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 20
Match NameE-valueIdentityDescription
gb|KFM71562.1|2.718e-1034.31Transposable element Tcb2 transposase, partial [St... [more]
gb|KFM74861.1|1.109e-935.35hypothetical protein X975_18449, partial [Stegodyp... [more]
gb|KFM61875.1|2.486e-933.33Retrovirus-related Pol polyprotein from transposon... [more]
gb|KFM63037.1|6.765e-927.84hypothetical protein X975_02648, partial [Stegodyp... [more]
gb|KFM64358.1|1.109e-839.44hypothetical protein X975_25070, partial [Stegodyp... [more]
gb|EFA13346.1|1.198e-830.43hypothetical protein TcasGA2_TC002325 [Tribolium c... [more]
gb|KFM56668.1|7.992e-832.79hypothetical protein X975_17469, partial [Stegodyp... [more]
gb|EFA06508.1|1.076e-729.55hypothetical protein TcasGA2_TC009407 [Tribolium c... [more]
gb|KFM67093.1|1.473e-734.15hypothetical protein X975_26725, partial [Stegodyp... [more]
gb|KFM66923.1|2.361e-739.71hypothetical protein X975_05448, partial [Stegodyp... [more]

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BLAST of EMLSAG00000001153 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|748304337|gb|KIH42235.1|5.033e-1736.89integrase core domain protein [Ancylostoma duodena... [more]
gi|954377984|gb|KRY43651.1|1.077e-1538.78hypothetical protein T03_6895 [Trichinella britovi... [more]
gi|597865463|gb|EYC14861.1|1.207e-1536.89hypothetical protein Y032_0039g49 [Ancylostoma cey... [more]
gi|954605939|gb|KRZ82006.1|1.354e-1538.78hypothetical protein T08_2963 [Trichinella sp. T8][more]
gi|954605949|gb|KRZ82011.1|1.354e-1538.78hypothetical protein T08_16631, partial [Trichinel... [more]
gi|954605947|gb|KRZ82010.1|1.354e-1538.78hypothetical protein T08_13270, partial [Trichinel... [more]
gi|339257582|ref|XP_003369834.1|1.383e-1538.78conserved hypothetical protein [Trichinella spiral... [more]
gi|954363910|gb|KRY30670.1|1.447e-1539.58hypothetical protein T03_16191, partial [Trichinel... [more]
gi|954376516|gb|KRY42408.1|1.450e-1538.78hypothetical protein T01_3074 [Trichinella spirali... [more]
gi|339233598|ref|XP_003381916.1|1.463e-1538.78putative integrase core domain protein [Trichinell... [more]

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BLAST of EMLSAG00000001153 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1190supercontigLSalAtl2s1190:92088..92396 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s1190-processed-gene-0.16
Biotypeprotein_coding
EvidenceIEA
Noteintegrase core domain protein [Ancylostoma duodenale]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001153 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001153EMLSAT00000001153-697000Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1190:92088..92396-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001153-683919 ID=EMLSAG00000001153-683919|Name=EMLSAG00000001153|organism=Lepeophtheirus salmonis|type=gene|length=309bp|location=Sequence derived from alignment at LSalAtl2s1190:92088..92396- (Lepeophtheirus salmonis)
ATGGCTTTATTTACATGCCTTCATACGAGTGCTATCCACGTTGAGATAAT
TGAATCTCGTTCTACACGAGAGTTTATACAAAATCTCAGAAAATGCATTG
GCCTATATGGCAAACCTGAAATTATCTACTGTGATAATTCTCGTAATTTT
GTAACCTCAAATAAGCAACTACAAACACTTAAAAATATGGACTTTAATAA
AGTTCAAGAGGAGAATTATTCAGGGGAATATATTGAATGGAAATTCAGTA
CCTCTGAGGCACCTTGGACCAATCAATTCACAGAACGTATGGAGGCTATA
TTCAAATAG
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