EMLSAG00000001153, EMLSAG00000001153-683919 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000001153
Unique Name	EMLSAG00000001153-683919
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592898609|gb|GAXK01059766.1| (TSA: Calanus finmarchicus comp5665461_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 6.172e-2
Identity = 12/54 (22.22%), Postives = 25/54 (46.30%), Query Frame = 0

Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQ 56
            LF CL   A+ + ++    T +F+      +  +G+P + Y D   N   + ++
Sbjct:  412 LFVCLQVKAVKIYLVGGLHTEDFLLAWDSFVADHGQPAVAYSDRGTNLTAAVRE 573

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BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592783591|gb|GAXK01170977.1| (TSA: Calanus finmarchicus comp4304980_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.3426 bits (72), Expect = 1.652e-1
Identity = 21/102 (20.59%), Postives = 45/102 (44.12%), Query Frame = 0

Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQ--LQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            L  CL   A+ + +     T +F+      +  +G+P + Y D   N V++ K+     + + D++++ E   +    +W+F  + + + N   E     FK
Sbjct:  777 LVVCLQVKAVKIYLAGGLGTEDFLLAWDSFVADHGQPMVAYGDRGTNLVSAAKEGGDTDVPDYDWDRIAET--AQGRTDWQFHPAGSQFRNGAVEVFVKKFK 1076

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BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592864466|gb|GAXK01093096.1| (TSA: Calanus finmarchicus comp4419632_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 3.141e-1
Identity = 24/104 (23.08%), Postives = 45/104 (43.27%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLK--NMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LF CL T A+ + +    +T +F+      +  +G+P   + D       + KQ   ++  + D++ V E   S     W F+ ++A + N   E     FK
Sbjct:  546 VVLFVCLSTKALKLYVAGGYATGDFLLAWDGFVADHGEPLTCHSDRGSQLTAAAKQNPDMEVPDYDWDVVAESTKSK--TAWYFTPAQAQFRNGAVEIFVRKFK 851

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BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592933835|gb|GAXK01024718.1| (TSA: Calanus finmarchicus comp4659972_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 3.431e-1
Identity = 21/100 (21.00%), Postives = 47/100 (47.00%), Query Frame = 0

Query:    6 CLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKN---MDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            C  TSA+ + +    S   F+Q   +     G+P+++Y D     +++   L    +   +D+ +V ++      ++W F+ +++ W N    + EA+ K
Sbjct:  489 CSCTSAVKLYLSRDYSEEGFLQAWTQHTSDCGEPDLVYSDRGSQLISAAGGLDPGDDEYELDWTEVSKKT----GVKWIFTPAQSQWRNG---KAEAVVK 767

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BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592873324|gb|GAXK01084238.1| (TSA: Calanus finmarchicus comp7007070_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 1.532e+0
Identity = 23/103 (22.33%), Postives = 39/103 (37.86%), Query Frame = 0

Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQL---QTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            ++TC  T A+ +      ST  F+    + +   GKP  +  D     V     L   +   N ++ +V ++N      +W F    +P  N   E    I K
Sbjct:   82 VYTCRSTKAVCLLATAGYSTSHFLARHEEYVARKGKPRSVTTDRGTQLVKGGIVLAEKEKPSNWNWAEVVQKN---SVSDWVFVPVGSPHRNGLAESTVKILK 381

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BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592848900|gb|GAXK01108644.1| (TSA: Calanus finmarchicus comp2859020_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 2.001e+0
Identity = 14/53 (26.42%), Postives = 24/53 (45.28%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTS 53
            M +F C  T A++ +IIE + T   +    +       P+IIY D     + +
Sbjct:  763 MMVFACCVTGAVNCQIIEGKKTGYCLDGFNRFFSEVAVPKIIYPDLEGGLIKA 921

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BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592843536|gb|GAXK01114008.1| (TSA: Calanus finmarchicus comp2117478_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 2.368e+0
Identity = 24/97 (24.74%), Postives = 41/97 (42.27%), Query Frame = 0

Query:    2 ALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQL-QTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
             + TCL T A    + ES ST   +  L K     G P   + D  R  V +++ + + ++ +D   ++    S E  ++ F T   P      ER+
Sbjct:  562 VVITCLTTRACQTYLAESFSTDHLLCVLSKHEARNGSPAEYFADLGRQIVGADRVMTEAVEKLDQEMIERFAASNES-KFNFGTPHFPEGQGAVERL 849

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BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592943610|gb|GAXK01014943.1| (TSA: Calanus finmarchicus comp6505258_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.4906 bits (62), Expect = 4.452e+0
Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 0

Query:   67 KVQEENYSGEYIEWKFSTSEAPWTNQFTE 95
            +++E+N  G Y   +FST E PW N+  E
Sbjct:  384 RLEEDNDDGTY---EFSTEENPWVNRVKE 461

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BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592768342|gb|GAXK01186226.1| (TSA: Calanus finmarchicus comp44629_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 28.1054 bits (61), Expect = 6.384e+0
Identity = 20/88 (22.73%), Postives = 36/88 (40.91%), Query Frame = 0

Query:   32 CIGLYGKPEIIY-------------CDNSRNFVTSNKQLQTLKNMDFNKVQEE---------NYSGEYIEWKFSTSEAPWTNQFTERM 97
            C+G+  + +++Y             C    N +T    + T K +  NK  E+          Y GE   + ++T E+P+  Q + RM
Sbjct: 1362 CMGIVSEKDVLYSVLPMYHSAGVAVCQG--NTITEGLTMVTRKKLSANKFWEDCVRNKVTCAQYIGEIARYLYATPESPYEKQHSIRM 1619

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BLAST of EMLSAG00000001153 vs. L. salmonis peptides
Match: EMLSAP00000001153 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1190:92088:92396:-1 gene:EMLSAG00000001153 transcript:EMLSAT00000001153 description:"snap_masked-LSalAtl2s1190-processed-gene-0.16")

HSP 1 Score: 214.927 bits (546), Expect = 4.030e-73
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK
Sbjct:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102

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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM60670.1| (hypothetical protein X975_07709, partial [Stegodyphus mimosarum])

HSP 1 Score: 73.559 bits (179), Expect = 6.174e-16
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC    AIH+E++ S ST  F+   R  I   G+PEI+Y +N  NFV +N     L+ +D++K+  +N+     +WKF    +PW   F ERM A+ K
Sbjct:  114 IVLFTCAIYRAIHLELLTSLSTDNFLLAFRHFIARRGRPEIVYAENGSNFVGTN---SLLRMIDWDKII-KNHIVNRTKWKFIPPASPWWGGFWERMIALMK 211

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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM68396.1| (hypothetical protein X975_24834, partial [Stegodyphus mimosarum])

HSP 1 Score: 68.1662 bits (165), Expect = 5.298e-14
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC    AIH+E+  S ST  F+ +LR+ +   G+P IIY DN  NF  + ++L    N+D+ K+  +  + E I WKF+   A W   + ER+  + K
Sbjct:  726 IVLFTCAIYRAIHLELTSSLSTDTFLMSLRRFVARRGRPRIIYSDNGTNFRGAQRELS---NIDWEKILRQTAT-ERIIWKFNPPTAAWWGGWWERLVRMVK 823

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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM74603.1| (putative RNA-directed DNA polymerase from transposon X-element, partial [Stegodyphus mimosarum])

HSP 1 Score: 68.1662 bits (165), Expect = 6.434e-14
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC    AIH+E+  S ST  F+ +LR+ +   G+P IIY DN  NF  + ++L    N+D+ K+  +  + E I WKF+   A W   + ER+  + K
Sbjct: 1417 IVLFTCAIYRAIHLELTSSLSTDTFLMSLRRFVARRGRPRIIYSDNGTNFRGAQRELS---NIDWEKILRQT-ATERIIWKFNPPTAAWWGGWWERLVRMVK 1514

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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM59784.1| (hypothetical protein X975_08509, partial [Stegodyphus mimosarum])

HSP 1 Score: 67.781 bits (164), Expect = 7.124e-14
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC    AIH+E+  S ST  F+ +LR+ +   G+P IIY DN  NF  + ++L    N+D+ K+  +  + E I WKF+   A W   + ER+  + K
Sbjct: 1207 IVLFTCAIYRAIHLELTSSLSTDTFLMSLRRFVARRGRPRIIYSDNGTNFRGAQRELS---NIDWEKILRQTAT-ERIIWKFNPPTAAWWGGWWERLVRMVK 1304

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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM62154.1| (hypothetical protein X975_06179, partial [Stegodyphus mimosarum])

HSP 1 Score: 66.2402 bits (160), Expect = 3.203e-13
Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            +ALFTC  T AIH+E++ + ST  F+   ++     G   +IY DN++ F    K+L+    +  N+  ++  S E IEWKF      W   F ER+
Sbjct: 1474 VALFTCATTRAIHLELVPNLSTDSFLMAFKRFTSRRGNCRVIYSDNAKTFKKGKKELENFSKLLSNEKFQDFLSNEKIEWKFIIDRGAWWGGFYERL 1570

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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KXZ75531.1| (hypothetical protein TcasGA2_TC033491 [Tribolium castaneum])

HSP 1 Score: 65.855 bits (159), Expect = 4.244e-13
Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNK----VQEENYSGEYIEWKFSTSEAP 88
            + +F CL T AIH+E +   +T+ F+Q LR+ +   GKP +IY DN  NFV ++ +LQ L N   +K    V + + + + I W F  + +P
Sbjct: 2320 ICVFVCLTTRAIHLEAVSDLTTQCFLQTLRRFVARRGKPRVIYSDNGSNFVGASSELQRLYNFIRSKSNFDVIQTSLANDSISWIFIPANSP 2411

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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|EFA09479.1| (hypothetical protein TcasGA2_TC010973 [Tribolium castaneum])

HSP 1 Score: 62.7734 bits (151), Expect = 5.153e-12
Identity = 33/106 (31.13%), Postives = 59/106 (55.66%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNM----DFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            +ALF CL   A+H+E++   ++  F+  L++ +   GK E I  DN  NFV +N++LQ ++++    +F K   +  + E I+WKF  +++P+     E     FK
Sbjct: 1201 VALFICLVMRAVHLELVLDYTSESFLNALKRMMARRGKVESIISDNGTNFVGANRELQEIEHLFKSNEFEKNVVKELNNEGIKWKFIPAKSPYIGGIWEAGVKAFK 1306

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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM75025.1| (Jerky-like protein, partial [Stegodyphus mimosarum])

HSP 1 Score: 59.3066 bits (142), Expect = 6.484e-11
Identity = 31/89 (34.83%), Postives = 51/89 (57.30%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQL-QTLKNMDFNKVQEENYSGEYIEWKFSTSEAP 88
            + LF C  T AIH+E++   ST+ F+  L++ I   GKP  I+ D + NF+ +NK+L + L  +  ++  +   S E I+W F+   AP
Sbjct:  414 ICLFICFTTRAIHLELVGDLSTKSFLATLKRFIARRGKPCEIHSDCATNFIGANKELRKVLSTVQRDEHLQGYISSENIKWLFNPPSAP 502

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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM75559.1| (hypothetical protein X975_18538, partial [Stegodyphus mimosarum])

HSP 1 Score: 58.151 bits (139), Expect = 1.954e-10
Identity = 28/97 (28.87%), Postives = 50/97 (51.55%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + +FTC  T AIH+E++    T  F+  L++ +     P  +Y DN+  F  ++K+L+   +   +   ++ Y+   I+WKF    A W   + ERM
Sbjct: 1402 IVIFTCATTRAIHLELVSDLRTDVFLLALQRFVSRRSLPHTVYTDNATTFCAADKELKLFWDTISSAKVQQFYAHHNIKWKFIAPRAAWWGGWWERM 1498

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BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM70593.1| (hypothetical protein X975_21762, partial [Stegodyphus mimosarum])

HSP 1 Score: 57.7658 bits (138), Expect = 2.371e-10
Identity = 28/97 (28.87%), Postives = 50/97 (51.55%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + +FTC  T AIH+E++    T  F+  L++ +     P  +Y DN+  F  ++K+L+   +   +   ++ Y+   I+WKF    A W   + ERM
Sbjct: 1323 IVIFTCATTRAIHLELVSDLRTDVFLLALQRFVSRRSLPHTVYTDNATTFCAADKELKLFWDTISSAKVQQFYAHHNIKWKFIAPRAAWWGGWWERM 1419

[Close]

BLAST of EMLSAG00000001153 vs. nr
Match: gi|748304337|gb|KIH42235.1| (integrase core domain protein [Ancylostoma duodenale])

HSP 1 Score: 81.2629 bits (199), Expect = 5.033e-17
Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQ-TLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC+ TSA+H+E++ + +  EF+  LR+ I   G P++I  DN+  F + N  LQ  + N D  K     ++   I WKF+T  +PW   F ER+  +FK
Sbjct:   40 ICLFTCMATSAVHLELVHNNTAFEFLLALRRFIARRGTPDLIISDNATTFTSGNDALQKVIYNKDTIKRLSSQFANRRITWKFNTPLSPWKGGFYERLVGLFK 142

[Close]

BLAST of EMLSAG00000001153 vs. nr
Match: gi|954377984|gb|KRY43651.1| (hypothetical protein T03_6895 [Trichinella britovi])

HSP 1 Score: 80.4925 bits (197), Expect = 1.077e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  111 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 207

[Close]

BLAST of EMLSAG00000001153 vs. nr
Match: gi|597865463|gb|EYC14861.1| (hypothetical protein Y032_0039g49 [Ancylostoma ceylanicum])

HSP 1 Score: 80.4925 bits (197), Expect = 1.207e-15
Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQT-LKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
            + LFTC+ T A+H+E++ + +T EF+  LR+ I   G P++I  DN+  F + N  LQ  + N D  K     ++   I WKF+T  +PW   F ER+  +FK
Sbjct: 1317 ICLFTCMATRAVHLELVHNNTTYEFLLALRRFIARRGTPDLIISDNATTFTSGNDALQKIIYNKDTIKKLSAQFANRRITWKFNTPLSPWKGGFYERLVGLFK 1419

[Close]

BLAST of EMLSAG00000001153 vs. nr
Match: gi|954605939|gb|KRZ82006.1| (hypothetical protein T08_2963 [Trichinella sp. T8])

HSP 1 Score: 80.4925 bits (197), Expect = 1.354e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct: 1215 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1311

[Close]

BLAST of EMLSAG00000001153 vs. nr
Match: gi|954605949|gb|KRZ82011.1| (hypothetical protein T08_16631, partial [Trichinella sp. T8])

HSP 1 Score: 80.4925 bits (197), Expect = 1.354e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct: 1238 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1334

[Close]

BLAST of EMLSAG00000001153 vs. nr
Match: gi|954605947|gb|KRZ82010.1| (hypothetical protein T08_13270, partial [Trichinella sp. T8])

HSP 1 Score: 80.4925 bits (197), Expect = 1.354e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct: 1238 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1334

[Close]

BLAST of EMLSAG00000001153 vs. nr
Match: gi|339257582|ref|XP_003369834.1| (conserved hypothetical protein [Trichinella spiralis] >gi|316962331|gb|EFV48605.1| conserved hypothetical protein [Trichinella spiralis])

HSP 1 Score: 80.1073 bits (196), Expect = 1.383e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  264 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 360

[Close]

BLAST of EMLSAG00000001153 vs. nr
Match: gi|954363910|gb|KRY30670.1| (hypothetical protein T03_16191, partial [Trichinella britovi])

HSP 1 Score: 78.5666 bits (192), Expect = 1.447e-15
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 0

Query:    3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            LFTC+ + A+H+E +   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:   94 LFTCMASRAVHLEQVPEMTTARVMQALRRFIARRGRPEIIQSDNFRSFEAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 188

[Close]

BLAST of EMLSAG00000001153 vs. nr
Match: gi|954376516|gb|KRY42408.1| (hypothetical protein T01_3074 [Trichinella spiralis])

HSP 1 Score: 80.4925 bits (197), Expect = 1.450e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  489 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 585

[Close]

BLAST of EMLSAG00000001153 vs. nr
Match: gi|339233598|ref|XP_003381916.1| (putative integrase core domain protein [Trichinella spiralis] >gi|316979212|gb|EFV62034.1| putative integrase core domain protein [Trichinella spiralis])

HSP 1 Score: 80.4925 bits (197), Expect = 1.463e-15
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0

Query:    1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97
            + LFTC+ + A+H+E++   +T   +Q LR+ I   G+PEII  DN R+F  +  +L+ L +++D ++VQ E   G  I WKF T  APW   + ER+
Sbjct:  674 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 770

The following BLAST results are available for this feature:

BLAST of EMLSAG00000001153 vs. GO
BLAST of EMLSAG00000001153 vs. C. finmarchicus
BLAST of EMLSAG00000001153 vs. L. salmonis peptides
BLAST of EMLSAG00000001153 vs. SwissProt
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
BLAST of EMLSAG00000001153 vs. nr
BLAST of EMLSAG00000001153 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000001153 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000001153 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 19


Match Name	E-value	Identity	Description
gi\|592898609\|gb\|GAXK01059766.1\|	6.172e-2	22.22	TSA: Calanus finmarchicus comp5665461_c0_seq1 tran...	[more]
gi\|592783591\|gb\|GAXK01170977.1\|	1.652e-1	20.59	TSA: Calanus finmarchicus comp4304980_c0_seq1 tran...	[more]
gi\|592864466\|gb\|GAXK01093096.1\|	3.141e-1	23.08	TSA: Calanus finmarchicus comp4419632_c0_seq1 tran...	[more]
gi\|592933835\|gb\|GAXK01024718.1\|	3.431e-1	21.00	TSA: Calanus finmarchicus comp4659972_c0_seq1 tran...	[more]
gi\|592873324\|gb\|GAXK01084238.1\|	1.532e+0	22.33	TSA: Calanus finmarchicus comp7007070_c0_seq1 tran...	[more]
gi\|592848900\|gb\|GAXK01108644.1\|	2.001e+0	26.42	TSA: Calanus finmarchicus comp2859020_c0_seq1 tran...	[more]
gi\|592843536\|gb\|GAXK01114008.1\|	2.368e+0	24.74	TSA: Calanus finmarchicus comp2117478_c1_seq1 tran...	[more]
gi\|592943610\|gb\|GAXK01014943.1\|	4.452e+0	41.38	TSA: Calanus finmarchicus comp6505258_c0_seq1 tran...	[more]
gi\|592768342\|gb\|GAXK01186226.1\|	6.384e+0	22.73	TSA: Calanus finmarchicus comp44629_c1_seq2 transc...	[more]

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BLAST of EMLSAG00000001153 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000001153	4.030e-73	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1190:9208...	[more]

BLAST of EMLSAG00000001153 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 20


Match Name	E-value	Identity	Description
gb\|KFM60670.1\|	6.174e-16	38.24	hypothetical protein X975_07709, partial [Stegodyp...	[more]
gb\|KFM68396.1\|	5.298e-14	36.27	hypothetical protein X975_24834, partial [Stegodyp...	[more]
gb\|KFM74603.1\|	6.434e-14	36.27	putative RNA-directed DNA polymerase from transpos...	[more]
gb\|KFM59784.1\|	7.124e-14	36.27	hypothetical protein X975_08509, partial [Stegodyp...	[more]
gb\|KFM62154.1\|	3.203e-13	34.02	hypothetical protein X975_06179, partial [Stegodyp...	[more]
gb\|KXZ75531.1\|	4.244e-13	35.87	hypothetical protein TcasGA2_TC033491 [Tribolium c...	[more]
gb\|EFA09479.1\|	5.153e-12	31.13	hypothetical protein TcasGA2_TC010973 [Tribolium c...	[more]
gb\|KFM75025.1\|	6.484e-11	34.83	Jerky-like protein, partial [Stegodyphus mimosarum...	[more]
gb\|KFM75559.1\|	1.954e-10	28.87	hypothetical protein X975_18538, partial [Stegodyp...	[more]
gb\|KFM70593.1\|	2.371e-10	28.87	hypothetical protein X975_21762, partial [Stegodyp...	[more]

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BLAST of EMLSAG00000001153 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|748304337\|gb\|KIH42235.1\|	5.033e-17	36.89	integrase core domain protein [Ancylostoma duodena...	[more]
gi\|954377984\|gb\|KRY43651.1\|	1.077e-15	38.78	hypothetical protein T03_6895 [Trichinella britovi...	[more]
gi\|597865463\|gb\|EYC14861.1\|	1.207e-15	36.89	hypothetical protein Y032_0039g49 [Ancylostoma cey...	[more]
gi\|954605939\|gb\|KRZ82006.1\|	1.354e-15	38.78	hypothetical protein T08_2963 [Trichinella sp. T8]	[more]
gi\|954605949\|gb\|KRZ82011.1\|	1.354e-15	38.78	hypothetical protein T08_16631, partial [Trichinel...	[more]
gi\|954605947\|gb\|KRZ82010.1\|	1.354e-15	38.78	hypothetical protein T08_13270, partial [Trichinel...	[more]
gi\|339257582\|ref\|XP_003369834.1\|	1.383e-15	38.78	conserved hypothetical protein [Trichinella spiral...	[more]
gi\|954363910\|gb\|KRY30670.1\|	1.447e-15	39.58	hypothetical protein T03_16191, partial [Trichinel...	[more]
gi\|954376516\|gb\|KRY42408.1\|	1.450e-15	38.78	hypothetical protein T01_3074 [Trichinella spirali...	[more]
gi\|339233598\|ref\|XP_003381916.1\|	1.463e-15	38.78	putative integrase core domain protein [Trichinell...	[more]

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BLAST of EMLSAG00000001153 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1190	supercontig	LSalAtl2s1190:92088..92396 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap_masked-LSalAtl2s1190-processed-gene-0.16
Biotype	protein_coding
Evidence	IEA
Note	integrase core domain protein [Ancylostoma duodenale]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000001153 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000001153	EMLSAT00000001153-697000	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1190:92088..92396-

gene from alignment at LSalAtl2s1190:92088..92396-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000001153-683919 ID=EMLSAG00000001153-683919|Name=EMLSAG00000001153|organism=Lepeophtheirus salmonis|type=gene|length=309bp|location=Sequence derived from alignment at LSalAtl2s1190:92088..92396- (Lepeophtheirus salmonis)
ATGGCTTTATTTACATGCCTTCATACGAGTGCTATCCACGTTGAGATAAT
TGAATCTCGTTCTACACGAGAGTTTATACAAAATCTCAGAAAATGCATTG
GCCTATATGGCAAACCTGAAATTATCTACTGTGATAATTCTCGTAATTTT
GTAACCTCAAATAAGCAACTACAAACACTTAAAAATATGGACTTTAATAA
AGTTCAAGAGGAGAATTATTCAGGGGAATATATTGAATGGAAATTCAGTA
CCTCTGAGGCACCTTGGACCAATCAATTCACAGAACGTATGGAGGCTATA
TTCAAATAG

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